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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005263 ID=TCONS_00005263|Name=TCONS_00005263|organism=Clytia hemisphaerica|type=transcript|length=1321bp
AGACATTTAGTGAGTGAAGTTAAAGAAGAACGAATGATGACCGCCTCAAA
GAGTTATTCTGTCGTTGCTTTAGCcgtctttttgagtttttggttGGTGT
TCACCTTGAAGTACAGCGAGACAACTGAAGGAGTCATCCGCAATCTGATC
AACCCTTCACCAAGACGTACACAGAAAGACCACAAAGTGCTTTTCATCTT
GGGACCTGGCCGGTCAGGAACGTCTCTTCTCGGTGATTTGTTTAATTCGC
GAAAAGATTTCATCTATTTTTTTGAGCCCTTGAAAGCGATTCGAACATAC
CACAAGATAGGGGAACCCACTTCGATTCATCAACTACAATATATGTTACA
AGAGGTGGGAGAGTATATGAAAGACATCGTCTCATGTAACTATCGATCAC
GTAATGATAAATACATCAACTTGGTACACAGTGGAGGGATGTTCTTCAGT
AAAATGGACTTTCTACATTCACCGCCTTTCTGTGCTGAAGGAGAGAGaaa
ttgtaaaaagaaaaacattacgtcatccATGATGAATGAAATGTGTGATC
ATTTGGATGAAGATGTCACCATCGTTATTAAAGACTTGTACAAAAATTTC
CCTTACTTCGATCCCTCGCTCATCCAATATGTTCAACTCAATAAAATGAA
GACTTTCCACGTTTTGCAAGCCTTGAGAGATCCAAGAGCCATTTTGAATT
CGTATCGAAAATTGAACTGGATTACGGACAACGTACGTAAGGACGTCAAC
AGACAGGCGTCAACCGCCGTTCCCATATTTTGTGGACGGTTGGTTCACAT
CTTGAAACACTTCCCCAAAGCACCAGGATCGAACAAAGTGAAGTACGCCA
TCTTTCGTTATGATGACATGGCATACCATGACATCACAAGCATCGCTCGC
TCATTGGCAGAATTTTTGGACGTTGACCTGAgtgatgaatttgaaaatta
tttacgGGAGAAAACACAAGGTGAGGATGATTTCAAAACAGCCTCCCTTT
CTCTCGCACCCAGGAATATTTCACTCACCATACTGAATTGGAGAAAGGAG
ATCCCTATGGACCTTTTAGAGCAAATCGAAAGTACGGAGTCATGTCAACA
GTTGTTACAGATGCTTGGATACAAGATGGCGGAAAATAAGGAGGCTTTGT
TTGATGAACATAACGTTTTGGTGAAAGAACCTTTACTCCTTGATGTAATT
GGTCATTGAGCGACATGTTTTATAACTTATCTACctagaaaatatatttt
gattaaaatacGAAGTATGTGGGAATGAAATTTTCTcgatattttgatat
ttaaaaagAACTACAGTAGCT Run BLAST on NCBI protein sequence of TCONS_00005263-protein >TCONS_00005263-protein ID=TCONS_00005263-protein|Name=TCONS_00005263-protein|organism=Clytia hemisphaerica|type=polypeptide|length=402bp
RHLVSEVKEERMMTASKSYSVVALAVFLSFWLVFTLKYSETTEGVIRNLI
NPSPRRTQKDHKVLFILGPGRSGTSLLGDLFNSRKDFIYFFEPLKAIRTY
HKIGEPTSIHQLQYMLQEVGEYMKDIVSCNYRSRNDKYINLVHSGGMFFS
KMDFLHSPPFCAEGERNCKKKNITSSMMNEMCDHLDEDVTIVIKDLYKNF
PYFDPSLIQYVQLNKMKTFHVLQALRDPRAILNSYRKLNWITDNVRKDVN
RQASTAVPIFCGRLVHILKHFPKAPGSNKVKYAIFRYDDMAYHDITSIAR
SLAEFLDVDLSDEFENYLREKTQGEDDFKTASLSLAPRNISLTILNWRKE
IPMDLLEQIESTESCQQLLQMLGYKMAENKEALFDEHNVLVKEPLLLDVI
GH Run BLAST on NCBI transcript from alignment at sc0000051:753389..754709 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005263 ID=TCONS_00005263|Name=TCONS_00005263|organism=Clytia hemisphaerica|type=transcript|length=1321bp|location=Sequence derived from alignment at sc0000051:753389..754709 (Clytia hemisphaerica)
AGCTACTGTAGTTctttttaaatatcaaaatatcgAGAAAATTTCATTCC
CACATACTTCgtattttaatcaaaatatattttctagGTAGATAAGTTAT
AAAACATGTCGCTCAATGACCAATTACATCAAGGAGTAAAGGTTCTTTCA
CCAAAACGTTATGTTCATCAAACAAAGCCTCCTTATTTTCCGCCATCTTG
TATCCAAGCATCTGTAACAACTGTTGACATGACTCCGTACTTTCGATTTG
CTCTAAAAGGTCCATAGGGATCTCCTTTCTCCAATTCAGTATGGTGAGTG
AAATATTCCTGGGTGCGAGAGAAAGGGAGGCTGTTTTGAAATCATCCTCA
CCTTGTGTTTTCTCCcgtaaataattttcaaattcatcacTCAGGTCAAC
GTCCAAAAATTCTGCCAATGAGCGAGCGATGCTTGTGATGTCATGGTATG
CCATGTCATCATAACGAAAGATGGCGTACTTCACTTTGTTCGATCCTGGT
GCTTTGGGGAAGTGTTTCAAGATGTGAACCAACCGTCCACAAAATATGGG
AACGGCGGTTGACGCCTGTCTGTTGACGTCCTTACGTACGTTGTCCGTAA
TCCAGTTCAATTTTCGATACGAATTCAAAATGGCTCTTGGATCTCTCAAG
GCTTGCAAAACGTGGAAAGTCTTCATTTTATTGAGTTGAACATATTGGAT
GAGCGAGGGATCGAAGTAAGGGAAATTTTTGTACAAGTCTTTAATAACGA
TGGTGACATCTTCATCCAAATGATCACACATTTCATTCATCATggatgac
gtaatgtttttctttttacaatttCTCTCTCCTTCAGCACAGAAAGGCGG
TGAATGTAGAAAGTCCATTTTACTGAAGAACATCCCTCCACTGTGTACCA
AGTTGATGTATTTATCATTACGTGATCGATAGTTACATGAGACGATGTCT
TTCATATACTCTCCCACCTCTTGTAACATATATTGTAGTTGATGAATCGA
AGTGGGTTCCCCTATCTTGTGGTATGTTCGAATCGCTTTCAAGGGCTCAA
AAAAATAGATGAAATCTTTTCGCGAATTAAACAAATCACCGAGAAGAGAC
GTTCCTGACCGGCCAGGTCCCAAGATGAAAAGCACTTTGTGGTCTTTCTG
TGTACGTCTTGGTGAAGGGTTGATCAGATTGCGGATGACTCCTTCAGTTG
TCTCGCTGTACTTCAAGGTGAACACCaaccaaaaactcaaaaagacgGCT
AAAGCAACGACAGAATAACTCTTTGAGGCGGTCATCATTCGTTCTTCTTT
AACTTCACTCACTAAATGTCT Coding sequence (CDS) from alignment at sc0000051:753389..754709 >TCONS_00005263 ID=TCONS_00005263|Name=TCONS_00005263|organism=Clytia hemisphaerica|type=CDS|length=1209bp|location=Sequence derived from alignment at sc0000051:753389..754709 (Clytia hemisphaerica)
TCAATGACCAATTACATCAAGGAGTAAAGGTTCTTTCACCAAAACGTTAT
GTTCATCAAACAAAGCCTCCTTATTTTCCGCCATCTTGTATCCAAGCATC
TGTAACAACTGTTGACATGACTCCGTACTTTCGATTTGCTCTAAAAGGTC
CATAGGGATCTCCTTTCTCCAATTCAGTATGGTGAGTGAAATATTCCTGG
GTGCGAGAGAAAGGGAGGCTGTTTTGAAATCATCCTCACCTTGTGTTTTC
TCCcgtaaataattttcaaattcatcacTCAGGTCAACGTCCAAAAATTC
TGCCAATGAGCGAGCGATGCTTGTGATGTCATGGTATGCCATGTCATCAT
AACGAAAGATGGCGTACTTCACTTTGTTCGATCCTGGTGCTTTGGGGAAG
TGTTTCAAGATGTGAACCAACCGTCCACAAAATATGGGAACGGCGGTTGA
CGCCTGTCTGTTGACGTCCTTACGTACGTTGTCCGTAATCCAGTTCAATT
TTCGATACGAATTCAAAATGGCTCTTGGATCTCTCAAGGCTTGCAAAACG
TGGAAAGTCTTCATTTTATTGAGTTGAACATATTGGATGAGCGAGGGATC
GAAGTAAGGGAAATTTTTGTACAAGTCTTTAATAACGATGGTGACATCTT
CATCCAAATGATCACACATTTCATTCATCATggatgacgtaatgtttttc
tttttacaatttCTCTCTCCTTCAGCACAGAAAGGCGGTGAATGTAGAAA
GTCCATTTTACTGAAGAACATCCCTCCACTGTGTACCAAGTTGATGTATT
TATCATTACGTGATCGATAGTTACATGAGACGATGTCTTTCATATACTCT
CCCACCTCTTGTAACATATATTGTAGTTGATGAATCGAAGTGGGTTCCCC
TATCTTGTGGTATGTTCGAATCGCTTTCAAGGGCTCAAAAAAATAGATGA
AATCTTTTCGCGAATTAAACAAATCACCGAGAAGAGACGTTCCTGACCGG
CCAGGTCCCAAGATGAAAAGCACTTTGTGGTCTTTCTGTGTACGTCTTGG
TGAAGGGTTGATCAGATTGCGGATGACTCCTTCAGTTGTCTCGCTGTACT
TCAAGGTGAACACCaaccaaaaactcaaaaagacgGCTAAAGCAACGACA
GAATAACTCTTTGAGGCGGTCATCATTCGTTCTTCTTTAACTTCACTCAC
TAAATGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005263-exon-sc0000051-1491911889:753389..754709 | TCONS_00005263-exon-sc0000051-1491911889:753389..754709 | Clytia hemisphaerica | exon |
| TCONS_00005263-exon-sc0000051-1510915933:753389..754709 | TCONS_00005263-exon-sc0000051-1510915933:753389..754709 | Clytia hemisphaerica | exon |
| TCONS_00005263-exon-sc0000051-1575043694:753389..754709 | TCONS_00005263-exon-sc0000051-1575043694:753389..754709 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051 | supercontig | sc0000051:753389..754709 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008146 | sulfotransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008146 |
sulfotransferase activity |
Blast
The following BLAST results are available for this feature:
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