TCONS_00005246 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005246
Unique NameTCONS_00005246
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005246 ID=TCONS_00005246|Name=TCONS_00005246|organism=Clytia hemisphaerica|type=transcript|length=193bp
CGGAAATCTCTGACATTAAAGTTACCTGCATTTTAAAATATGTATTGTAA
ATTTGTTCATTCAAACAtttcattttttacattttcaaactttctttttt
agacaaattgtaagttcttcttttttacATGACAATATTTCAAGTAGTTT
CATCGCAAAGAACGATTCTTTTTTACATGACAATATTTCAAGT
Run BLAST on NCBI

transcript from alignment at sc0000051:236122..236314

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005246 ID=TCONS_00005246|Name=TCONS_00005246|organism=Clytia hemisphaerica|type=transcript|length=193bp|location=Sequence derived from alignment at sc0000051:236122..236314 (Clytia hemisphaerica)
ACTTGAAATATTGTCATGTAAAAAAGAATCGTTCTTTGCGATGAAACTAC
TTGAAATATTGTCATgtaaaaaagaagaacttacaatttgtctaaaaaag
aaagtttgaaaatgtaaaaaatgaaaTGTTTGAATGAACAAATTTACAAT
ACATATTTTAAAATGCAGGTAACTTTAATGTCAGAGATTTCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002987XLOC_002987Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005246-exon-sc0000051-1491911889:236122..236314TCONS_00005246-exon-sc0000051-1491911889:236122..236314Clytia hemisphaericaexon
TCONS_00005246-exon-sc0000051-1510915933:236122..236314TCONS_00005246-exon-sc0000051-1510915933:236122..236314Clytia hemisphaericaexon
TCONS_00005246-exon-sc0000051-1575043694:236122..236314TCONS_00005246-exon-sc0000051-1575043694:236122..236314Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:236122..236314 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005246 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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