TCONS_00005242 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005242
Unique NameTCONS_00005242
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length173

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005242 ID=TCONS_00005242|Name=TCONS_00005242|organism=Clytia hemisphaerica|type=transcript|length=173bp
tttttcatcattatttACAAAGATATCCATGGATTACCTCTTCCgaatac
caaaccaaccaacttaGAGATTTCAGAGACATTTGCTTGACATGAAGAAA
ACGCTACATCCCCATAACTTTGGACATTAAATGGTTGGCAAAATGGTATT
AACATTCTATTGAGATGTGAAAC
Run BLAST on NCBI

transcript from alignment at sc0000051:194205..194377

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005242 ID=TCONS_00005242|Name=TCONS_00005242|organism=Clytia hemisphaerica|type=transcript|length=173bp|location=Sequence derived from alignment at sc0000051:194205..194377 (Clytia hemisphaerica)
GTTTCACATCTCAATAGAATGTTAATACCATTTTGCCAACCATTTAATGT
CCAAAGTTATGGGGATGTAGCGTTTTCTTCATGTCAAGCAAATGTCTCTG
AAATCTCtaagttggttggtttggtattcGGAAGAGGTAATCCATGGATA
TCTTTGTaaataatgatgaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002983XLOC_002983Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005242-exon-sc0000051-1491911889:194205..194377TCONS_00005242-exon-sc0000051-1491911889:194205..194377Clytia hemisphaericaexon
TCONS_00005242-exon-sc0000051-1510915933:194205..194377TCONS_00005242-exon-sc0000051-1510915933:194205..194377Clytia hemisphaericaexon
TCONS_00005242-exon-sc0000051-1575043694:194205..194377TCONS_00005242-exon-sc0000051-1575043694:194205..194377Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:194205..194377 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005242 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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