TCONS_00005233 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005233
Unique NameTCONS_00005233
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5866

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005233 ID=TCONS_00005233|Name=TCONS_00005233|organism=Clytia hemisphaerica|type=transcript|length=5866bp
GTGATTTCTGAAAACCATGAAATGGAATAAGATGTAACTGGAAACTGCTA
TTCGAGAGATAGTTTGTCACTTTTATTACGAAAGCCTTTCCTCGCTTCTA
AGCCTTCGACTGACAAAACCCAGAATGTTGACATGACAACCAATTACGTc
atgaaaacaacaaaatgatgATGGATGTGATGAAAGTTTACAGTgcaaat
aaaacttttgaacAGTGTGaggtgaaaatattttgatcatcAAATTGCAC
TTTTTAACAGCAAAAGCGAATAAGTTACGAGAAAGCAGACGCAAGAAATC
CATTCAAAATGCATCAATTTTCAATATTTTGGTTGACCATCTTGTCAATA
ATGGTCAAAAGATTTGAAAGCAGACCCACATTCACTTTCCCTGACATTCC
AAACTTAGATCATAAGACAGCTCGAGGATGTAAATATAACCatcaatttt
acagaccaggaGGTTTCATCAAGTCGGTATACAAAGATGATCGCTGTCTA
GAAATCAGGTGTTCACCGAGAGGGAAAATCACTCAAAGATTGAACCGCCT
TCCCGAAAGATGCCATGAAATCATCAGCTCCACTAANATGACCGCTGTCT
AGAAATCAGGTGTTCACCGAGAGGGAAAATCACTCAAAGATTGAACCGCC
TTCCCGAAAGATGCCATGAAATCATCAGCTCCACTAAACCCCCTGTCACA
ACTACTACAAAGTCGTTGACAACTACTCCCATGACAACACCTCATGGTTG
CTATGGAGATGATGGAAAATTCTATGCACCTGAAGAAAAGATGAGCGAAG
GGTTTGACGAGCAAACAAATTGGTGTTATGGATCCTATTGCAATCAACAT
GGACAAGTTATTCAATGGGACAATTTCAACTGCAAAACGACTCCCCCAAC
CACGGAGCCTATGACGACTGAGCCCATGACAACTCCTCCGCAAGGTTGCT
ATGGAGATGACGGTAAAATCTATGCGCCTGGGGAAAAGATATCCGAGGAT
TTCGATGGATGTTATGGATCATACTGTGATCAACATGGACAAGTTATTCA
ATGGAATAGCTTCAACTGTAAATCGACCTCACCTACTACTGAACCAACGA
CAACAACTCCACTGACGACAACAACTCCAACGACGACTACTCCCATGACA
ACGCCACATGGTTGTTATGGAGATGACGGAAAATTCTACACACCTGGAGA
AAAGATGAGCGAAGGGTTTGATGGACAAACAAATTGGTGTTATGGATCTT
ATTGTGATCAACATGGACAAGTGATTAAATGGGACAATTTCAACTGCAAA
ACAACTCCCCCAACCACGGAACCTATGACGACCACAACTCCAACGACCAC
TACTCCCATGACAACGCCACTTGGTTGCTATGGAGATGATGGAAAATTCT
ATGCACCGGGAGAAAAGATGAACGATGGATTTGACGAACAAACAAATTGG
TGTTATGGGACATATTGCGACCAACATGGCCAAATACAACACTGGGATAA
TTTCAACTGCAAAACCACTCCCCCAACAACCACAGAAACCATGACAACCC
CTCCTATGACAACACCCCGTGGTTGCCTGGGGGATGATGGAAAATTCTAT
GCACCCGGAGAAACAATGGACGAAGGTTTTGACGAGGAATCTAATTGGTG
TTACGGGTCCTACTGTGATAAAATACACGCAGAAGTTGTGGAATGGGATA
ATTTTAACTGCAAATCGACCCCACCCACTACCGACCCCACAACCATACCG
ACGTCCGAAGCAGCAGGTCTCTTTGGAAAAGAAGGTCATGGAAAATGATT
CAACTGAATAACAATGGACATATTGAATAAAGaagtaaaaattaaaattg
aaattgaactATGTTATGACAAAATCTATATTGGAATAAAGCATTGTAAA
AGATATCTATATTCTAGACTACCTTAAGAGAACTCCTTTTCGCGGAACTT
ATTTTCACATTACGACGGTACTAAATTGGCGCATTTTatggaattaattt
ttgcggttgaCATCCCCTTTTTACCGATATTCTTTCGTATTTCTAGgggt
ttttgaggatttttaggagaaattgcatttcgcgggactaattttcgcgg
taaacatccaaaatcgcaaaaattagttccgcaaaaattagttccaccGA
AAATTAGTTTTCTTAAGGTATTAGTATCATCAAATGAGAAGAAGTAGAAA
CGAAAGACCAAACAATACGCGTAATCATTTGTTCGAAAAAAGTACAGTTT
AATAAGGACACCGTTAAAAAAATAGATATTCCTATGTCTCTACGACAAAG
CAATTACGACTACGAAAAAGAAACTGAAAGTATCCGCTACGTCTAAAATA
CGTCTTACATTTACTACTTTGAAAAATACCTACTAACTTATGAAAGATTT
CGACGTTTTGTGGTGGATAGGAATTTGTTGTTTTCCTTAAGAAAAAGCAT
AGTTGGTTTCAAAAAACTATcgggtgcaccacaaaaaagtttctctcttt
gaaactaattttctcgaaatctaaaaatattaaaagaaccactcctattt
cattggaaagaagaaagatagacttaaattttgatgggtcatttattaaa
ttcgattcattagatcaaaagctatgctcaattgaataaaaaagttactt
tcagaaagtgctcgaaaactttaaaatcgacctatcaaatttttacttta
aatttggcaattgcaatagcctttacatgattaagagcatttttcaataa
caaaacaCATAagttttgaaactgaagggttagagggtttaaaaccttca
tcaaaatcaatttaatttacttttaccgaaattttcctcagatttttggt
tctagactggataaagtctatgtaaggctggatctacctcgaaacctatA
TTTGAtgcatttttatgaattttatcaGATTATTTCatatttggcctttt
tcgacgaattctCTTCCTTTCAtcgaaattcaaccttcctttaaataaca
aaaggtcatttagacagctaattatcatttttaatgactgaaaccaaAAT
ACTGATgtaggaaggttgaatttcgaTGAAAGGAAGagaattcgtcgaaa
aaggccaaataatctggtaaaattcatgtaattatgcttctgtttaattt
gataggtcgatttttaacgtttttgagcattttccgaaagtaactttttc
attcaattgagcataacttttgatctaatgaatcgaatttaataaatgac
ccatcaaaatttaagtttatctttcttctttccaatgaaataggaacggt
tcttttaaaacttttagattttgagaaaattagttttaaagagagaaact
tttttgtggcgcacccggtatcatTGTATGGTTAGGAAAGTATTGGACTA
TAAAAATCGAAAAGCGACTTTcataaatgtgaaaaaatcatcATTACAGG
GCATTAAAGTCTTTTtactttatattcatttaaaaaataattttaaatct
aaATATCTCAGGATCTTACAGTTTTCTCGAGTCAGCCAGTTACCCTGTGA
TGCGGATCAtttattggactttttcaaaagtgTCTTGCAAAACAGATATA
TATTTGGGGTGGATGTGAGCGCCATCAAATGAATATTCTTCCTTCAAATA
TCCGCTTCGTTCATCAATCAATTGGTCCATAAAATCTAACCAAGTTAAAC
TTGCAATTTTCATAACTCGTTCTTTCAAGATTGAGTTGAACTGCATAACG
ATGTCGCAAGTTTCCTTCAACACACACGGCACAGGGTGGACGTAAACATT
CGATTTATTGCGTTTCTTCACGCTCGACATTGTTTTGACGTAAATATCAA
CTAAAGCTTCGATGCTTTCTTTCACAGAATCGTAAAGACATTTTTCGACA
ACTTTTCGAACTCCTTCTCGACAATCGATTtcaccgaggatgaaaagaca
TGGCGTTCCACTTTCCATTTGTTGTATGGATGTATCAAAACACTTCTTGG
TGTAGAACTGAGATTCTTGTCGAAGGTGCCAGATTTTCAGTCCAGTGACG
AGGATTGGTTTGGTCATATAATCTTTCTCCTTGATCTTGACGGTTTGCCA
GGCGATAGGTAACACATGGCTATCTCCAATGACGTACAGCTTGTTGGGTG
ACGCCGTGTTGAAAGTGACGGGACTTTCAATGAGTTGATCAATGCATGAG
AAGAAAGCTTGCTCGTTTCGGATTAAGGTTTTATGCAGATCGTTCTGCAT
GGTAAATAATGGCTTCATCAACTTCACAAGGGAGGGGATGATTTCAACTT
TTCCTTCCACAAAAAGGATTTTGATGACAGTGAAGTAGAGAGCCAATAAT
TGTAGTTCCACATTTGCCATGCTCCCAGTGGGTGAGGGCTCTTTTGGCTC
CACTTCGAACGGTGTCAGCTCGCTTGTGCTGTCTGATAAGTATGACTTGA
TTACGGTGGTAAATTTACTGAGATCGATCTTTCTCAACACTTGTCTATCG
TGTTTACTGTCAATAAAATCCCCCACAAACTTTAACGCTGCGTTCAAATC
GCGTTTGTTTTCAAAGACATGAGCGGTCAAAAGAGCGACATCGATACTTT
TTGGTGCTAATCTAAGCGCATGCTCGAGCAGCTTCAAACAAACATCGATA
GCACCACACTCTCTGAGAAAGGTGGCGATATAAACAACTGCAGTGACGTC
AGACCATGCGTCATTCATTTGACGTTGCAGACATTCCATTCCGTTTTTCT
GTTGTACCATCTTAGCGAAGAAATGCTGAACTTTGACATCATTTTTACGG
AGAGCAATGGCGTTCAAAACCACAATGAAAACGTCATCCAGTGAAACGAG
TCCCAATTGATATCCAACTCTGGCATAACCCAACAAGGCGTCCACGTTTT
GCTTCTCTGTCATTTGAGATACTgacaaataaatttgaaaagcgTTTTGC
ATTTCATCCATTGATTCCAAGGCTTCAGCTAAAACAACATTAGTGTTGCA
AACAGCCTTCACTTTACCCGCACGTTTTAGATCTTCAATGGAGCGAGATA
AAACGTTAAGAGCCTGTTTATGATGCTTACATTCAATCAAACTTCGAGCA
TAATCCAACACAACAACATCATTGGAATTGTCAATGTTCAAAAGTTTCTC
AAAATAAGTCAAGCTTTCTTTGAAACGTTTCGCTTTGAAAAGGATGTAAG
CAATTCCGAATGTAGCTTCATAACTACTACTTAATGAAGAAATTATCTCT
TTATAAATTGCCAATGCTGCATTGTTCATGCTTTTAGATATAAGCTCATC
TGCCTTCTTCAATAGCTCCTCATGTTCATCGGTACTTTGAGAAACAGttt
ttttacttgattttaACGGAGCACTTTTATCTTTGTTGATGACAGTCTTC
TCATATTTCGTACTAGTGTCGCACACACTGGTTTGAACCACAACCTTCAA
ATCACAACCATTTTGAAGGCTTGAAAGGTCAGTGTCCATCTCCAAAACTT
TTTGCTTCAAGGATACTTCCAAATATTTGGTGTTTAGTGAAGTTTTAGCA
TGATCATTAAGACGAGCACACAACTTCTGAAGACAAGATTTCAATTCGAG
TTTTTCATCTGATTGAAGAACCGCGGTCACAATGTTGTGATTGTGATGGC
CTCCCAGGTGGATGTGGAAATacagcttcattttgaatatctaaaagaaa
aaagttagcCTTTTAAAAAACGTTCTGATTCAATGAAAATGTCAACAACA
ATAATTTACAACAATAATTTACATCATGACTTAATAATGCTTAATTTTTG
AGTCCCCTCTTAAAACACAAAACTCCCCTTATTGATTTACCCTCCCCTTA
AAGCTTAAAGGTCGTT
Run BLAST on NCBI

transcript from alignment at sc0000051:694849..700898-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005233 ID=TCONS_00005233|Name=TCONS_00005233|organism=Clytia hemisphaerica|type=transcript|length=6050bp|location=Sequence derived from alignment at sc0000051:694849..700898- (Clytia hemisphaerica)
GTGATTTCTGAAAACCATGAAATGGAATAAGATGTAACTGGAAACTGCTA TTCGAGAGATAGTTTGTCACTTTTATTACGAAAGCCTTTCCTCGCTTCTA AGCCTTCGACTGACAAAACCCAGAATGTTGACATGACAACCAATTACGTC ATGAAAACAACAAAATGATGATGGATGTGATGAAAGTTTACAGTGCAAAT AAAACTTTTGAACAGTGTGAGGTGAAAATATTTTGATCATCAAATTGCAC TTTTTAACAGCAAAAGCGAATAAGTTACGAGAAAGCAGACGCAAGAAATC CATTCAAAATGCATCAATTTTCAATATGTGAGTACTTTTCTTTTTCTTTC AATTTCCTTTTAACTATTGCAAGGATTTTGTCAGTTTGTAAATATTCTTT CCAAGAGTTAATTTAGATGTATAAATGAAGTCAGAACTGAATCGAATTTG TTAAACTGATGACCACATCACTAGTCTTTCTTAATTCATACTATCGTGTT TTCTATTCCAGTTTGGTTGACCATCTTGTCAATAATGGTCAAAAGATTTG AAAGCAGACCCACATTCACTTTCCCTGACATTCCAAACTTAGATCATAAG ACAGCTCGAGGATGTAAATATAACCATCAATTTTACAGACCAGGAGGTTT CATCAAGTCGGTATACAAAGATGATCGCTGTCTAGAAATCAGGTGTTCAC CGAGAGGGAAAATCACTCAAAGATTGAACCGCCTTCCCGAAAGATGCCAT GAAATCATCAGCTCCACTAANATGACCGCTGTCTAGAAATCAGGTGTTCA CCGAGAGGGAAAATCACTCAAAGATTGAACCGCCTTCCCGAAAGATGCCA TGAAATCATCAGCTCCACTAAACCCCCTGTCACAACTACTACAAAGTCGT TGACAACTACTCCCATGACAACACCTCATGGTTGCTATGGAGATGATGGA AAATTCTATGCACCTGAAGAAAAGATGAGCGAAGGGTTTGACGAGCAAAC AAATTGGTGTTATGGATCCTATTGCAATCAACATGGACAAGTTATTCAAT GGGACAATTTCAACTGCAAAACGACTCCCCCAACCACGGAGCCTATGACG ACTGAGCCCATGACAACTCCTCCGCAAGGTTGCTATGGAGATGACGGTAA AATCTATGCGCCTGGGGAAAAGATATCCGAGGATTTCGATGGATGTTATG GATCATACTGTGATCAACATGGACAAGTTATTCAATGGAATAGCTTCAAC TGTAAATCGACCTCACCTACTACTGAACCAACGACAACAACTCCACTGAC GACAACAACTCCAACGACGACTACTCCCATGACAACGCCACATGGTTGTT ATGGAGATGACGGAAAATTCTACACACCTGGAGAAAAGATGAGCGAAGGG TTTGATGGACAAACAAATTGGTGTTATGGATCTTATTGTGATCAACATGG ACAAGTGATTAAATGGGACAATTTCAACTGCAAAACAACTCCCCCAACCA CGGAACCTATGACGACCACAACTCCAACGACCACTACTCCCATGACAACG CCACTTGGTTGCTATGGAGATGATGGAAAATTCTATGCACCGGGAGAAAA GATGAACGATGGATTTGACGAACAAACAAATTGGTGTTATGGGACATATT GCGACCAACATGGCCAAATACAACACTGGGATAATTTCAACTGCAAAACC ACTCCCCCAACAACCACAGAAACCATGACAACCCCTCCTATGACAACACC CCGTGGTTGCCTGGGGGATGATGGAAAATTCTATGCACCCGGAGAAACAA TGGACGAAGGTTTTGACGAGGAATCTAATTGGTGTTACGGGTCCTACTGT GATAAAATACACGCAGAAGTTGTGGAATGGGATAATTTTAACTGCAAATC GACCCCACCCACTACCGACCCCACAACCATACCGACGTCCGAAGCAGCAG GTCTCTTTGGAAAAGAAGGTCATGGAAAATGATTCAACTGAATAACAATG GACATATTGAATAAAGAAGTAAAAATTAAAATTGAAATTGAACTATGTTA TGACAAAATCTATATTGGAATAAAGCATTGTAAAAGATATCTATATTCTA GACTACCTTAAGAGAACTCCTTTTCGCGGAACTTATTTTCACATTACGAC GGTACTAAATTGGCGCATTTTATGGAATTAATTTTTGCGGTTGACATCCC CTTTTTACCGATATTCTTTCGTATTTCTAGGGGTTTTTGAGGATTTTTAG GAGAAATTGCATTTCGCGGGACTAATTTTCGCGGTAAACATCCAAAATCG CAAAAATTAGTTCCGCAAAAATTAGTTCCACCGAAAATTAGTTTTCTTAA GGTATTAGTATCATCAAATGAGAAGAAGTAGAAACGAAAGACCAAACAAT ACGCGTAATCATTTGTTCGAAAAAAGTACAGTTTAATAAGGACACCGTTA AAAAAATAGATATTCCTATGTCTCTACGACAAAGCAATTACGACTACGAA AAAGAAACTGAAAGTATCCGCTACGTCTAAAATACGTCTTACATTTACTA CTTTGAAAAATACCTACTAACTTATGAAAGATTTCGACGTTTTGTGGTGG ATAGGAATTTGTTGTTTTCCTTAAGAAAAAGCATAGTTGGTTTCAAAAAA CTATCGGGTGCACCACAAAAAAGTTTCTCTCTTTGAAACTAATTTTCTCG AAATCTAAAAATATTAAAAGAACCACTCCTATTTCATTGGAAAGAAGAAA GATAGACTTAAATTTTGATGGGTCATTTATTAAATTCGATTCATTAGATC AAAAGCTATGCTCAATTGAATAAAAAAGTTACTTTCAGAAAGTGCTCGAA AACTTTAAAATCGACCTATCAAATTTTTACTTTAAATTTGGCAATTGCAA TAGCCTTTACATGATTAAGAGCATTTTTCAATAACAAAACACATAAGTTT TGAAACTGAAGGGTTAGAGGGTTTAAAACCTTCATCAAAATCAATTTAAT TTACTTTTACCGAAATTTTCCTCAGATTTTTGGTTCTAGACTGGATAAAG TCTATGTAAGGCTGGATCTACCTCGAAACCTATATTTGATGCATTTTTAT GAATTTTATCAGATTATTTCATATTTGGCCTTTTTCGACGAATTCTCTTC CTTTCATCGAAATTCAACCTTCCTTTAAATAACAAAAGGTCATTTAGACA GCTAATTATCATTTTTAATGACTGAAACCAAAATACTGATGTAGGAAGGT TGAATTTCGATGAAAGGAAGAGAATTCGTCGAAAAAGGCCAAATAATCTG GTAAAATTCATGTAATTATGCTTCTGTTTAATTTGATAGGTCGATTTTTA ACGTTTTTGAGCATTTTCCGAAAGTAACTTTTTCATTCAATTGAGCATAA CTTTTGATCTAATGAATCGAATTTAATAAATGACCCATCAAAATTTAAGT TTATCTTTCTTCTTTCCAATGAAATAGGAACGGTTCTTTTAAAACTTTTA GATTTTGAGAAAATTAGTTTTAAAGAGAGAAACTTTTTTGTGGCGCACCC GGTATCATTGTATGGTTAGGAAAGTATTGGACTATAAAAATCGAAAAGCG ACTTTCATAAATGTGAAAAAATCATCATTACAGGGCATTAAAGTCTTTTT ACTTTATATTCATTTAAAAAATAATTTTAAATCTAAATATCTCAGGATCT TACAGTTTTCTCGAGTCAGCCAGTTACCCTGTGATGCGGATCATTTATTG GACTTTTTCAAAAGTGTCTTGCAAAACAGATATATATTTGGGGTGGATGT GAGCGCCATCAAATGAATATTCTTCCTTCAAATATCCGCTTCGTTCATCA ATCAATTGGTCCATAAAATCTAACCAAGTTAAACTTGCAATTTTCATAAC TCGTTCTTTCAAGATTGAGTTGAACTGCATAACGATGTCGCAAGTTTCCT TCAACACACACGGCACAGGGTGGACGTAAACATTCGATTTATTGCGTTTC TTCACGCTCGACATTGTTTTGACGTAAATATCAACTAAAGCTTCGATGCT TTCTTTCACAGAATCGTAAAGACATTTTTCGACAACTTTTCGAACTCCTT CTCGACAATCGATTTCACCGAGGATGAAAAGACATGGCGTTCCACTTTCC ATTTGTTGTATGGATGTATCAAAACACTTCTTGGTGTAGAACTGAGATTC TTGTCGAAGGTGCCAGATTTTCAGTCCAGTGACGAGGATTGGTTTGGTCA TATAATCTTTCTCCTTGATCTTGACGGTTTGCCAGGCGATAGGTAACACA TGGCTATCTCCAATGACGTACAGCTTGTTGGGTGACGCCGTGTTGAAAGT GACGGGACTTTCAATGAGTTGATCAATGCATGAGAAGAAAGCTTGCTCGT TTCGGATTAAGGTTTTATGCAGATCGTTCTGCATGGTAAATAATGGCTTC ATCAACTTCACAAGGGAGGGGATGATTTCAACTTTTCCTTCCACAAAAAG GATTTTGATGACAGTGAAGTAGAGAGCCAATAATTGTAGTTCCACATTTG CCATGCTCCCAGTGGGTGAGGGCTCTTTTGGCTCCACTTCGAACGGTGTC AGCTCGCTTGTGCTGTCTGATAAGTATGACTTGATTACGGTGGTAAATTT ACTGAGATCGATCTTTCTCAACACTTGTCTATCGTGTTTACTGTCAATAA AATCCCCCACAAACTTTAACGCTGCGTTCAAATCGCGTTTGTTTTCAAAG ACATGAGCGGTCAAAAGAGCGACATCGATACTTTTTGGTGCTAATCTAAG CGCATGCTCGAGCAGCTTCAAACAAACATCGATAGCACCACACTCTCTGA GAAAGGTGGCGATATAAACAACTGCAGTGACGTCAGACCATGCGTCATTC ATTTGACGTTGCAGACATTCCATTCCGTTTTTCTGTTGTACCATCTTAGC GAAGAAATGCTGAACTTTGACATCATTTTTACGGAGAGCAATGGCGTTCA AAACCACAATGAAAACGTCATCCAGTGAAACGAGTCCCAATTGATATCCA ACTCTGGCATAACCCAACAAGGCGTCCACGTTTTGCTTCTCTGTCATTTG AGATACTGACAAATAAATTTGAAAAGCGTTTTGCATTTCATCCATTGATT CCAAGGCTTCAGCTAAAACAACATTAGTGTTGCAAACAGCCTTCACTTTA CCCGCACGTTTTAGATCTTCAATGGAGCGAGATAAAACGTTAAGAGCCTG TTTATGATGCTTACATTCAATCAAACTTCGAGCATAATCCAACACAACAA CATCATTGGAATTGTCAATGTTCAAAAGTTTCTCAAAATAAGTCAAGCTT TCTTTGAAACGTTTCGCTTTGAAAAGGATGTAAGCAATTCCGAATGTAGC TTCATAACTACTACTTAATGAAGAAATTATCTCTTTATAAATTGCCAATG CTGCATTGTTCATGCTTTTAGATATAAGCTCATCTGCCTTCTTCAATAGC TCCTCATGTTCATCGGTACTTTGAGAAACAGTTTTTTTACTTGATTTTAA CGGAGCACTTTTATCTTTGTTGATGACAGTCTTCTCATATTTCGTACTAG TGTCGCACACACTGGTTTGAACCACAACCTTCAAATCACAACCATTTTGA AGGCTTGAAAGGTCAGTGTCCATCTCCAAAACTTTTTGCTTCAAGGATAC TTCCAAATATTTGGTGTTTAGTGAAGTTTTAGCATGATCATTAAGACGAG CACACAACTTCTGAAGACAAGATTTCAATTCGAGTTTTTCATCTGATTGA AGAACCGCGGTCACAATGTTGTGATTGTGATGGCCTCCCAGGTGGATGTG GAAATACAGCTTCATTTTGAATATCTAAAAGAAAAAAGTTAGCCTTTTAA AAAACGTTCTGATTCAATGAAAATGTCAACAACAATAATTTACAACAATA ATTTACATCATGACTTAATAATGCTTAATTTTTGAGTCCCCTCTTAAAAC ACAAAACTCCCCTTATTGATTTACCCTCCCCTTAAAGCTTAAAGGTCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002975XLOC_002975Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005233-exon-sc0000051-1575043694:700572..700898TCONS_00005233-exon-sc0000051-1575043694:700572..700898Clytia hemisphaericaexon
TCONS_00005233-exon-sc0000051-1575043694:694849..700387TCONS_00005233-exon-sc0000051-1575043694:694849..700387Clytia hemisphaericaexon
TCONS_00005233-exon-sc0000051-1510915933:700572..700898TCONS_00005233-exon-sc0000051-1510915933:700572..700898Clytia hemisphaericaexon
TCONS_00005233-exon-sc0000051-1510915933:694849..700387TCONS_00005233-exon-sc0000051-1510915933:694849..700387Clytia hemisphaericaexon
TCONS_00005233-exon-sc0000051-1491911889:700572..700898TCONS_00005233-exon-sc0000051-1491911889:700572..700898Clytia hemisphaericaexon
TCONS_00005233-exon-sc0000051-1491911889:694849..700387TCONS_00005233-exon-sc0000051-1491911889:694849..700387Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:694849..700898 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.59857 0.532022 0.124964 0 0.658213 0.534205 3.13569 2.53773 2.71334 3.36751 5.16196 1.95215 4.47633 5.44745 3.0032 2.60699 2.27142 6.17352 7.96875 9.8012 4.59894 4.7228 4.91029 4.62544 5.6964 6.72827 14.9838 16.258 14.2055 14.8075
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
IPR019734TPR_repeat
IPR013830SGNH_hydro
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005233 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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