TCONS_00005189 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005189
Unique NameTCONS_00005189
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005189 ID=TCONS_00005189|Name=TCONS_00005189|organism=Clytia hemisphaerica|type=transcript|length=2108bp
TTGGCgggaaattattttgaaatagaaagcgctcattttcaaaatggtag
cttcGCTCAAGGGAAAATTTGGTGCGTTGGTTGTTGGTTCAAAATTATCA
TCTGATGAAATGAAAGGACATGGAAACGGATGGCTCAGTGTTGCTACAAA
TATCCCAGAAAAAAAGTGGGAAAAGAAGAAGTCAACAAAGAAGCTACTGA
AagtcaacaacaaaaacaacagtGGTATCATTTCAAGTTTTTCCTCTTCA
CCTTTCTTTCATGAAAATATATCATTTTTGGATACATCAAACTACAGACA
AACAAGCATCTCCAGCttcttaaaaaagaaatctaAAGCTAAAGAAAAGG
GCAAGAAGCATGTTTACCCCGGAAAAGAAAATATCCCACCAAATTTGAAC
ACAGACGTTCAGCTAAAAGAGGATGACTCTTATATATCAGACAATGAACT
GTCTATACCAGTCGTATCGTTACGAAACTCACAAAATATGAAATCATTTG
ACACCAAACTACTGCAATTCCACTCTTCTGACGAAAGCTCTGACGAATCC
CCAACAGCAGTGAATAATCATGAACCATCTTTacgcaaaaatattgattt
cGCAGAGAATACTTTTTTGAGGGAGATGCACGAGGAAAGTTGCCACACTA
ATCTTGACCCTTTATTTTCCTGCAATGATGAATCGGAAATTACGGATGCA
AATGACAAAAGTATCCCAGCTAACATTAGAATAACCCCAGAGTTTGGAGT
CAAGGAGACTAATCGTTGTAAAGCTTCATTCGAAAGCAGACTAAAAGAAA
TTACTCAATCAGAAGACTCACCTCAAGATTTCAACTCTGAAGATTTGTTT
TCGAAAAGTTCAAAATCCATGAGTGcagaaaatccaaaaataaagaattg
tgATCATAAATTATTTGAAGAAGAATCTTTGTGTCCAGATCTTCAAAATC
GACCCAAACAAAGTTTTTTGGATCCTTTCACTGACATTCAAGCTTCAAAT
GATCTTGAAGAAAATATCGAAATTAAAAATCATGGTAGTagatcaaattt
tttgaaacagttgcatgaaaaaagtttcaccAATCTTGAGCCTTTCAATG
AAGAAAGTCAACAAATAGAAAAATTGCATGAATTTACTCCAATAACGAAC
GAAATAAAATTGAACATcaatgataaaaaagaaaaagatttcctCAAGAA
ACTGCATGAGCAAAATATGTTCAGCAACCTCGATCTTTTTGGTGAAACTC
AAGAGGAGACACAAGATTCTGTAAATAGCAATATTCCAAAGACAACTTAT
GAGAGCGGAAAGAGCAATGAGAAATCAACAGTATTGATGAAATTGCACGA
AGAGAGCTGTCTGACAAACTTGGACCCATTCCTAAGCGAGGAGAATAATG
ATGTCTTTGCTTGTAATAAAACTGAAGGAAGCTTGATCATTGGTGATAAA
CCTCCACCGCCAATAAACTTTAGCAATACGTTGGAGGAGAGTTATTTTAA
TTCTCATACCTCCTCGACCTCCAGTGAACTGCAATCTCAATGCATTTGCA
ATTTCAAAAGACAGCTTCAAAGTGACGGCTCTTCTCAATGGGAGAGTAGT
AAAAGTGTTGCCAAAAATGTTGTTGGTTTCGATGATTTCTGGGATCTTTG
ACTGCAGTATACTTAGGTTTATTTTAGGAACATTTATCAATCTGTtgtaa
ataactttttttcacgtttttgtagttttttattgatatgttttttttat
aagcattgcacttgtaagcatatctaggctcagatatggaaaaaaattaa
gcatatggcaagcattacttgagcctacgaaaaatgttttttcctgattt
tggcttttttttggctggaattttaaggctttttagtatttccctaaatt
tttgctttggatataagcatccctcaagcattttttcagccttattaagc
tttcgacctaagcatctctgagcctgttttcggatttttatatgcttata
aaaaaaaaacatgtattgttGTTTATAACTACCAGAATAACTATCGAGCT
TTTGAAAAGTTGACAGTCACGCATTCTGACACAATTAATAAATTTAATAT
GCATGGGA
Run BLAST on NCBI

protein sequence of TCONS_00005189-protein

>TCONS_00005189-protein ID=TCONS_00005189-protein|Name=TCONS_00005189-protein|organism=Clytia hemisphaerica|type=polypeptide|length=535bp
MVASLKGKFGALVVGSKLSSDEMKGHGNGWLSVATNIPEKKWEKKKSTKK
LLKVNNKNNSGIISSFSSSPFFHENISFLDTSNYRQTSISSFLKKKSKAK
EKGKKHVYPGKENIPPNLNTDVQLKEDDSYISDNELSIPVVSLRNSQNMK
SFDTKLLQFHSSDESSDESPTAVNNHEPSLRKNIDFAENTFLREMHEESC
HTNLDPLFSCNDESEITDANDKSIPANIRITPEFGVKETNRCKASFESRL
KEITQSEDSPQDFNSEDLFSKSSKSMSAENPKIKNCDHKLFEEESLCPDL
QNRPKQSFLDPFTDIQASNDLEENIEIKNHGSRSNFLKQLHEKSFTNLEP
FNEESQQIEKLHEFTPITNEIKLNINDKKEKDFLKKLHEQNMFSNLDLFG
ETQEETQDSVNSNIPKTTYESGKSNEKSTVLMKLHEESCLTNLDPFLSEE
NNDVFACNKTEGSLIIGDKPPPPINFSNTLEESYFNSHTSSTSSELQSQC
ICNFKRQLQSDGSSQWESSKSVAKNVVGFDDFWDL
Run BLAST on NCBI

transcript from alignment at sc0000051:126262..143724-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005189 ID=TCONS_00005189|Name=TCONS_00005189|organism=Clytia hemisphaerica|type=transcript|length=17463bp|location=Sequence derived from alignment at sc0000051:126262..143724- (Clytia hemisphaerica)
TTGGCGGGAAATTATTTTGAAATAGAAAGCGCTCATTTTCAAAATGGTAG CTTCGCTCAAGGGAAAATTTGGTGCGTTGGTTGTTGGTTCAAAATTATCA TCTGATGAAATGAAAGGACATGGAAACGGATGGCTCAGTGTTGCTACAAA TATCCCAGAAAAAAAGTGGGAAAAGAAGAAGTCAACAAAGAAGCTACTGA AAGTCAACAACAAAAACAACAGTGGTATCATTTCAAGTTTTTCCTCTTCA CCTTTCTTTCATGAAAATATATCATTTTTGGATACATCAAACTACAGACA AACAAGCATCTCCAGCTTCTTAAAAAAGAAATCTAAAGCTAAAGGTATGG AAAATTCTATAACTGTTGGTGGAAGTCAGTCTAAGCTTTACAAACTCCTA CAGTTAGCCACACTAGCGTCCCGCCAAAATGCGTATCAAAGATTAATTTT TTTTTTTTTAATTCTCTTTTATCACCAAAAAACAGTTGGTATATATTTTA CAAGTTCCTCTACTCTGCTATATATAATAAATATATAGTGAAGATATGTA ATATCTGTCATTTTAGAAAAAGAAAAGTATTGATATATAAATAACTCAAA CTGATAAAAATGAAAAAAGTTAAGAATATTTTTGTTAATTGTGTGTATTT ACGATTTTTTTGGTATTTTTTATTTTTNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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AAGAAAATACGTACTGTAGGTGCAAAAAAGGGAAACCTAGAAAAGTTTAG TTTTTTGCACAAACCCCTGTAACTATGGGCAAGCACCCCATTGCTAAGAT GTTGGCTTGAAAATGAAACCACTCAAAACCAAAATAAAATCAGCTCGACC TTGGTTCAGAGGCCTTATATTTCATGATTTNTGCACTGCCGGATAGGCTA TCTCCCGGAAATTTTGCCTGACCTCAAACAATGACCCATTTACATGTGCG TAATTGTTTTTACTTTAGCGTAAAGACAAGGCCTTAAAAATCGAAGCGCT ATCTTGGGAATTGAATGACAAATCTTGGTTGTTTGATTTTGGCTGCTGCA CGTTTTATTTTGTTTCCAACTTTCAAGTTTTAATTAATATTGTCTTGCGA ACTTGATTCAGGTAACTCTCCTTCTTGTTGTTGAAATGTATCCTGTAGAT GACTGATGTTGTTTTTTCTGAAAGCTAGATTTCCTAGTGTGACTAACTGT CCTATATCAGGATTAGAAACTAGGCTAGTCTTACCTCTTTTATCTTTCCC TTTACAACAATACATTTGCTGACAAGTCGAGACAACACATGTGTACATGT ATATTGACAAGTAAATCCCTGAGAGAAGTTTATATTGAAATCTGCAACAA AAACAAAAGTGGTCTCTTCTACTGATTGCTTCCCAGCGCTCCTTCCCAGC TGTTTATCAAATTTCCACCAATGAAGTTGCCGCATTTCAAACAACCCTTC TTTTTGGCACCCGTGGCCTCGCAGTGCCTTGCACGATGATTGGCTGTAAA ATCCCACCCTTCATATATTTGTTTCAATCTGTGATCGTGTCCATGGTTTA TGTTTTTCTCATATTCAATTTACTGAAGAAAGCGGGAATTTGATGAGAGA GTTTGATTGTCAGCAAAGTGCGGTAAAACATCATTGAATAAAAGAAGAAC CTAAAATCTTAAATATTTTCATTTTGAAGAAAATACGTACTGTAGGTGCA AAAAAGGGAAACCTAGAAAAGTTTAGTTTTTTGCACAAACCCCTGTAACT ATGGGCAAGCACCCCATTGCTAAGATGTTGGCTTGAAAATGAAACCACTC AAAACCAAAATAAAATCAGCTCGACCTTGGTTCAGAGGCCTTATATTTCA TGATTTTGACAATATTTTTGTTATTTAATATCATTTTGTCAAAATTTGTG GGTGACATATTATTCAAAAATTTTCATGATAATACTATTCATATATAATT ATTTGAGACATATTATACTAGTACTATTATATGTGTTATGTATTACGTGT TATGAATTATACATCATGGTATCTTTATATTTTTTCCGGTCTATCTATCT ATCTATCTATCTATCTATCTATTGTGGTTGAGTTGTAGGAGGCTCTGGAG CCCATTCTCGCAACTATAGATGCTTTGAGTAAGCATCTCGTCAGCACCTT GAACTGACTACCCAATTTCCCTCACATGGCATGGGGAAAGGCGAAGGTTT GTTCACTTGCCAAGTGAACCGTTGTGAGTGGGAATCGAACCTTGGTCGCC TGTACAGGAATCAAGGTTGATGTCCACTATACCACAACGCCTTCTGTAAT TTGTATGCCCATGACCTGTACCCTGTGACCCGTGACCGGTGTTTCGAACT AGCCGCTCTTTTATTGTCTAAATACATACCCCCTTTCAATTAATTTCAAT TGTTTTCGTGGAACGTCTCAAGAAAAACTATATTCAGAACTTGGTCTTGA AAGCCTTGCTGACAGGCGCTTTGCTAGAAGAATGACATTCTTCTATGGAA TTATCAATAATTTAGCCCCTTCGTATTTACGTAACTACCTGCCGGTAAGA CTTACAGCACCAGGTGGCCTTAGAACAAGAAATCCTATTTATCCTCTTAA TATACGAACTGAGCGTTTCCGTAACACTTTTTTTCCGTACTGCATATCTC ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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TTACAGCCATCCACCAGGCAAGGGACTGGTGCCAAAAATAAGGGTTGTGT GAAATGTGACAATCTTATTCGTGGAAATTAAATGAATAGTCTGTGAAGGA GCGCCACCAAGCAATCAGTAGAAGAGATCACTTTTGTTTTTGTTGTTGAT TTCGATATAAACTTCTCACAGGGATTATTTGTCAATGTATTGTGTCAACT TGTCAGCATTGTATTGATACAAACGCAAAGATAAAAGGGGTAGGACTAGC CTAGTTTCTAATCATGATATAGGACTTTAAGTCTAGACTGTCAAATATAA TAAATCAAGCCAATCAAACTTTGTCAAACTTAATTTAACTTTTTTTTTAT TTATTGTTTGACTAAGTTTGGTTGTTGAACTTTAATGGAATACTCACAAA TTTTTTAAAAAAACGGGTGTCCCAGAAAAAAGTCCCCCTTTTTGAGACGA ATATTCTCGAAAAGTATTGGGAATTTTGGAAAAAATCTTTTTGCATCGTA AGGAGGAAAGGCTAACTTAAATTTTGATGTATCATACATGAAAATCTGAT CATTATTCAAAAGGTTACAAAGAAAAAACTTTTTTGTGATTTCAGAGAAT CCTGGAAAATCGTCAAAAATGGTCAAAAACGAAGGTATCAAATTTTAAGC AATTAATTCGATAATGACACTCTTTTTAAGAGTTTTATGACTTTGTCAAT AGTTATAATGGTTTTGATAAATAATTTTCATAAAATGTAAAACAATGATA TGAAGAGCTGAAAAAATAAGGCAATTTTTGGCAATTTTTCATTAAAAAAT TCTGCAAAAACATTAGAAAAGGCCTAATTTGATACCCTTGTTTTTGACGT TTTTTGACGATTTTTAGAAATCACAAAAAGGTTTTTTCTTTGTAACTTTT TGAATATTGATCAGAATTTAATGTATGATACATCAAAATTTAAGCTAGCC TTTCCTCTTTACGATGCAAAAAGATTTNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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AAAATTTCAAGGCGCTACAAAGCTATGGCAAGGGTAGGTCCCGCCCGGAC AATTGGCGTTTTCTGGTGGNATGTGTATAAAAAATGATAAAGATTGTCTC ATCAAAGATATAAGAATAAAGAAAGTGATTTTAGCAAAATGATAGGGTTG AAAATCAGAATTTTTTCTATCAGGCAAACCATGGTTGTGCTTCTTTAGTT ACTATTCTCTGGTTATTCTTACTTAAACCTTGAGCTAATAAGGAACCAAT ACAACCCCTGGTGGTGGAGCACAGTTTTAGTTCCTTTAGCCATGCCTACA GAATACTCTAACAGGTCCATTTTGAGCTCTTTGCTAAGCCATAACACCCC TGAGAAAATTTCAAGGCGCTACAAAGCTATGGCAAGGGTAGGTCCCGCCC GGACAATTGCCTTGGCGTTTTCTGGTGGCTAAAGTGATACAGCGCTCGAT TAGATTTTTCAAGTCCATTTTGCCAATAGAAGTAGTTGGTGATCACTACC TGTTATCAATTCATATCAGAGGTTCGCATTTTCAGGTGGTTAAAGTGGAC TTGATCTTTCTCTACCTTCTGGATAACAAGCCGGTATAATATCTAAGACA CAGGTGACACGGCACTCCACTAGTCCGTTTTGCCAAGAGAATTTAAATTA ATTTTTTTTTCTAAAAATTTGGTCCATAATTTACTTCTTCTTTGGTTTTC ACTGGAAGAAGGTGGTCACACTCATTTGAAGTGGCTTGGCAACCACCAAG TCAGCTCTTCTTTGACATTCATAACATTTTTGAGTGCTTGGTTTCTGGCA ATAAATGCAGGCGATAAACGCATATAATATGCTTTTTAGTTTGTTTACAG AGTTGTCTTGTGGTTACACTTTTTTCTGATAAAAAACTTTTTGAATTTAG CCCTGTTATCAATTTGTCTTTATGCAAGTTTTAAGGCTATGCAATGTTGT TATCTCTATTGCTTGACCAAAGAGCTCAAGAAAGCGCCAGTGACACATTT CTATGTGCACATCTTTTATAATATGTCATCTTTTTTATGACAATCTATAT AGGAATGGCTTGATTCAAATAGGAATACGTTCATTGTAATTGCAAGATCA GCAAATAGCTTTTTTTATGCATAGATTGGCTTAAAAATTGACTAGTCTGC CAAGTTGTTTTGTATTTAGGTCAGATTTCAAACGGTTCGCTTGTAAAACA TTCGAATTCTGCTNAAGTTGTTTTGTGTTTAGGTCAGATTTCAAACGGTT CGCTTGTAAAACATTCGAATTCTGCTGTTGGTAACAAAAATCGAAAACAA CATAACGGACTAGTCAGCTTTATTACTGGATACACTTCTTATGGGACCCC GATTCAGTCAAATAGTAAGGATCACTACCTGTTATTAATTCAGATCAGAG ATTTGTGTAGCGTTGTCAAGTCTAATATTTTCTTTATTTTATTCTTTAGA AAAGGGCAAGAAGCATGTTTACCCCGGAAAAGAAAATATCCCACCAAATT TGAACACAGACGTTCAGCTAAAAGAGGATGACTCTTATATATCAGACAAT GAACTGTCTATACCAGTCGTATCGTTACGAAACTCACAAAATATGAAATC ATTTGACACCAAACTACTGCAATTCCACTCTTCTGACGAAAGCTCTGACG AATCCCCAACAGCAGTGAATAATCATGAACCATCTTTACGCAAAAATATT GATTTCGCAGAGAATACTTTTTTGAGGGAGATGCACGAGGAAAGTTGCCA CACTAATCTTGACCCTTTATTTTCCTGCAATGATGAATCGGAAATTACGG ATGCAAATGACAAAAGTATCCCAGCTAACATTAGAATAACCCCAGAGTTT GGAGTCAAGGAGACTAATCGTTGTAAAGCTTCATTCGAAAGCAGACTAAA AGAAATTACTCAATCAGAAGACTCACCTCAAGATTTCAACTCTGAAGATT TGTTTTCGAAAAGTTCAAAATCCATGAGTGCAGAAAATCCAAAAATAAAG AATTGTGATCATAAATTATTTGAAGAAGAATCTTTGTGTCCAGATCTTCA AAATCGACCCAAACAAAGTTTTTTGGATCCTTTCACTGACATTCAAGCTT CAAATGATCTTGAAGAAAATATCGAAATTAAAAATCATGGTAGTAGATCA AATTTTTTGAAACAGTTGCATGAAAAAAGTTTCACCAATCTTGAGCCTTT CAATGAAGAAAGTCAACAAATAGAAAAATTGCATGAATTTACTCCAATAA CGAACGAAATAAAATTGAACATCAATGATAAAAAAGAAAAAGATTTCCTC AAGAAACTGCATGAGCAAAATATGTTCAGCAACCTCGATCTTTTTGGTGA AACTCAAGAGGAGACACAAGATTCTGTAAATAGCAATATTCCAAAGACAA CTTATGAGAGCGGAAAGAGCAATGAGAAATCAACAGTATTGATGAAATTG CACGAAGAGAGCTGTCTGACAAACTTGGACCCATTCCTAAGCGAGGAGAA TAATGATGTCTTTGCTTGTAATAAAACTGAAGGAAGCTTGATCATTGGTG ATAAACCTCCACCGCCAATAAACTTTAGCAATACGTTGGAGGAGAGTTAT TTTAATTCTCATACCTCCTCGACCTCCAGTGAACTGCAATCTCAATGCAT TTGCAATTTCAAAAGACAGCTTCAAAGTGACGGCTCTTCTCAATGGGAGA GTAGTAAAAGTGTTGCCAAAAATGTTGTTGGTTTCGATGATTTCTGGGAT CTTTGACTGCAGTATACTTAGGTTTATTTTAGGAACATTTATCAATCTGT TGTAAATAACTTTTTTTCACGTTTTTGTAGTTTTTTATTGATATGTTTTT TTTATAAGCATTGCACTTGTAAGCATATCTAGGCTCAGATATGGAAAAAA ATTAAGCATATGGCAAGCATTACTTGAGCCTACGAAAAATGTTTTTTCCT GATTTTGGCTTTTTTTTGGCTGGAATTTTAAGGCTTTTTAGTATTTCCCT AAATTTTTGCTTTGGATATAAGCATCCCTCAAGCATTTTTTCAGCCTTAT TAAGCTTTCGACCTAAGCATCTCTGAGCCTGTTTTCGGATTTTTATATGC TTATAAAAAAAAAACATGTATTGTTGTTTATAACTACCAGAATAACTATC GAGCTTTTGAAAAGTTGACAGTCACGCATTCTGACACAATTAATAAATTT AATATGCATGGGA

Coding sequence (CDS) from alignment at sc0000051:126262..143724-

>TCONS_00005189 ID=TCONS_00005189|Name=TCONS_00005189|organism=Clytia hemisphaerica|type=CDS|length=3216bp|location=Sequence derived from alignment at sc0000051:126262..143724- (Clytia hemisphaerica)
AAAAGGGCAAGAAGCATGTTTACCCCGGAAAAGAAAATATCCCACCAAAT
TTGAACACAGACGTTCAGCTAAAAGAGGATGACTCTTATATATCAGACAA
TGAACTGTCTATACCAGTCGTATCGTTACGAAACTCACAAAATATGAAAT
CATTTGACACCAAACTACTGCAATTCCACTCTTCTGACGAAAGCTCTGAC
GAATCCCCAACAGCAGTGAATAATCATGAACCATCTTTACGCAAAAATAT
TGATTTCGCAGAGAATACTTTTTTGAGGGAGATGCACGAGGAAAGTTGCC
ACACTAATCTTGACCCTTTATTTTCCTGCAATGATGAATCGGAAATTACG
GATGCAAATGACAAAAGTATCCCAGCTAACATTAGAATAACCCCAGAGTT
TGGAGTCAAGGAGACTAATCGTTGTAAAGCTTCATTCGAAAGCAGACTAA
AAGAAATTACTCAATCAGAAGACTCACCTCAAGATTTCAACTCTGAAGAT
TTGTTTTCGAAAAGTTCAAAATCCATGAGTGCAGAAAATCCAAAAATAAA
GAATTGTGATCATAAATTATTTGAAGAAGAATCTTTGTGTCCAGATCTTC
AAAATCGACCCAAACAAAGTTTTTTGGATCCTTTCACTGACATTCAAGCT
TCAAATGATCTTGAAGAAAATATCGAAATTAAAAATCATGGTAGTAGATC
AAATTTTTTGAAACAGTTGCATGAAAAAAGTTTCACCAATCTTGAGCCTT
TCAATGAAGAAAGTCAACAAATAGAAAAATTGCATGAATTTACTCCAATA
ACGAACGAAATAAAATTGAACATCAATGATAAAAAAGAAAAAGATTTCCT
CAAGAAACTGCATGAGCAAAATATGTTCAGCAACCTCGATCTTTTTGGTG
AAACTCAAGAGGAGACACAAGATTCTGTAAATAGCAATATTCCAAAGACA
ACTTATGAGAGCGGAAAGAGCAATGAGAAATCAACAGTATTGATGAAATT
GCACGAAGAGAGCTGTCTGACAAACTTGGACCCATTCCTAAGCGAGGAGA
ATAATGATGTCTTTGCTTGTAATAAAACTGAAGGAAGCTTGATCATTGGT
GATAAACCTCCACCGCCAATAAACTTTAGCAATACGTTGGAGGAGAGTTA
TTTTAATTCTCATACCTCCTCGACCTCCAGTGAACTGCAATCTCAATGCA
TTTGCAATTTCAAAAGACAGCTTCAAAGTGACGGCTCTTCTCAATGGGAG
AGTAGTAAAAGTGTTGCCAAAAATGTTGTTGGTTTCGATGATTTCTGGGA
TCTTTGAATGGTAGCTTCGCTCAAGGGAAAATTTGGTGCGTTGGTTGTTG
GTTCAAAATTATCATCTGATGAAATGAAAGGACATGGAAACGGATGGCTC
AGTGTTGCTACAAATATCCCAGAAAAAAAGTGGGAAAAGAAGAAGTCAAC
AAAGAAGCTACTGAAAGTCAACAACAAAAACAACAGTGGTATCATTTCAA
GTTTTTCCTCTTCACCTTTCTTTCATGAAAATATATCATTTTTGGATACA
TCAAACTACAGACAAACAAGCATCTCCAGCTTCTTAAAAAAGAAATCTAA
AGCTAAAGAAAAGGGCAAGAAGCATGTTTACCCCGGAAAAGAAAATATCC
CACCAAATTTGAACACAGACGTTCAGCTAAAAGAGGATGACTCTTATATA
TCAGACAATGAACTGTCTATACCAGTCGTATCGTTACGAAACTCACAAAA
TATGAAATCATTTGACACCAAACTACTGCAATTCCACTCTTCTGACGAAA
GCTCTGACGAATCCCCAACAGCAGTGAATAATCATGAACCATCTTTACGC
AAAAATATTGATTTCGCAGAGAATACTTTTTTGAGGGAGATGCACGAGGA
AAGTTGCCACACTAATCTTGACCCTTTATTTTCCTGCAATGATGAATCGG
AAATTACGGATGCAAATGACAAAAGTATCCCAGCTAACATTAGAATAACC
CCAGAGTTTGGAGTCAAGGAGACTAATCGTTGTAAAGCTTCATTCGAAAG
CAGACTAAAAGAAATTACTCAATCAGAAGACTCACCTCAAGATTTCAACT
CTGAAGATTTGTTTTCGAAAAGTTCAAAATCCATGAGTGCAGAAAATCCA
AAAATAAAGAATTGTGATCATAAATTATTTGAAGAAGAATCTTTGTGTCC
AGATCTTCAAAATCGACCCAAACAAAGTTTTTTGGATCCTTTCACTGACA
TTCAAGCTTCAAATGATCTTGAAGAAAATATCGAAATTAAAAATCATGGT
AGTAGATCAAATTTTTTGAAACAGTTGCATGAAAAAAGTTTCACCAATCT
TGAGCCTTTCAATGAAGAAAGTCAACAAATAGAAAAATTGCATGAATTTA
CTCCAATAACGAACGAAATAAAATTGAACATCAATGATAAAAAAGAAAAA
GATTTCCTCAAGAAACTGCATGAGCAAAATATGTTCAGCAACCTCGATCT
TTTTGGTGAAACTCAAGAGGAGACACAAGATTCTGTAAATAGCAATATTC
CAAAGACAACTTATGAGAGCGGAAAGAGCAATGAGAAATCAACAGTATTG
ATGAAATTGCACGAAGAGAGCTGTCTGACAAACTTGGACCCATTCCTAAG
CGAGGAGAATAATGATGTCTTTGCTTGTAATAAAACTGAAGGAAGCTTGA
TCATTGGTGATAAACCTCCACCGCCAATAAACTTTAGCAATACGTTGGAG
GAGAGTTATTTTAATTCTCATACCTCCTCGACCTCCAGTGAACTGCAATC
TCAATGCATTTGCAATTTCAAAAGACAGCTTCAAAGTGACGGCTCTTCTC
AATGGGAGAGTAGTAAAAGTGTTGCCAAAAATGTTGTTGGTTTCGATGAT
TTCTGGGATCTTTGAATGGTAGCTTCGCTCAAGGGAAAATTTGGTGCGTT
GGTTGTTGGTTCAAAATTATCATCTGATGAAATGAAAGGACATGGAAACG
GATGGCTCAGTGTTGCTACAAATATCCCAGAAAAAAAGTGGGAAAAGAAG
AAGTCAACAAAGAAGCTACTGAAAGTCAACAACAAAAACAACAGTGGTAT
CATTTCAAGTTTTTCCTCTTCACCTTTCTTTCATGAAAATATATCATTTT
TGGATACATCAAACTACAGACAAACAAGCATCTCCAGCTTCTTAAAAAAG
AAATCTAAAGCTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002950XLOC_002950Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005189-proteinTCONS_00005189-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005189-exon-sc0000051-1575043694:143381..143724TCONS_00005189-exon-sc0000051-1575043694:143381..143724Clytia hemisphaericaexon
TCONS_00005189-exon-sc0000051-1575043694:126262..128025TCONS_00005189-exon-sc0000051-1575043694:126262..128025Clytia hemisphaericaexon
TCONS_00005189-exon-sc0000051-1510915933:143381..143724TCONS_00005189-exon-sc0000051-1510915933:143381..143724Clytia hemisphaericaexon
TCONS_00005189-exon-sc0000051-1510915933:126262..128025TCONS_00005189-exon-sc0000051-1510915933:126262..128025Clytia hemisphaericaexon
TCONS_00005189-exon-sc0000051-1491911889:143381..143724TCONS_00005189-exon-sc0000051-1491911889:143381..143724Clytia hemisphaericaexon
TCONS_00005189-exon-sc0000051-1491911889:126262..128025TCONS_00005189-exon-sc0000051-1491911889:126262..128025Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:126262..143724 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.3388 15.0054 7.95108 7.38779 9.18962 6.64985 4.62138 4.63644 2.86287 3.33088 2.9886 2.5329 1.6917 1.57749 2.43144 2.35372 3.08628 3.92486 0.66994 0.826879 1.65145 1.24508 9.56723 8.40221 3.879 4.84155 1.62565 1.3109 6.16859 6.89644
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005189 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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