TCONS_00005164 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005164
Unique NameTCONS_00005164
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3992

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005164 ID=TCONS_00005164|Name=TCONS_00005164|organism=Clytia hemisphaerica|type=transcript|length=3992bp
ATCAAACTTTAATTTGTTAAGGAATTCACAAAAAAAGTGATTGCTATTCA
TCATTTGAATGAAAACGTCGTTCAATTCAGCCATTGTTTTTATCGGTTTT
CTGTACGTCAAAAAATATGGGAGACAACATTGCTCTTTTTGAACGAAAGA
AATGGTGAAACACggaaaaatgttctcaaatttctTCTTCTGTCTTTTGC
TGGTTCAAGcTCAAACAAAGGTGAAGACTGTTTCCAGCAACTTTTCTCGT
ATTCCTCAACTTAATGGATCGTCTACACAACTTTATTCGAATGCAAGTTT
GCTTCAAAATTCTCAACCACAACCACAACCACAACCAGAAAGAACAGAGT
ATTACGGGAAACAGAAAATGATGGACTCAGCGACTTTTGCAATGTTGGCA
ACCTCAATTCTGGCTTCAATTTCACTTTCAACTTCAAACGTTCATCAACC
ATCTACAGACATGTTACACCTTAAACCAAGCATGACCACAATAATGGAAG
ACCAGCTTCTTATGACCACACAAACACCTCTCCCTACTTCCAGTGATGGC
TTTTTAACAAAACATTCTTCTATCAGTCAAAGCACGCAGAGCGCGTCATC
GTCGCCGTCGTCGGAGTCGTCGTCATCGGCGTCAAATGTAGTCGTTCAAT
CTTTTAATGATACACATGATGTTAACATGGATGAAATAGGGTTGGTTAGA
AGTACTTCAGCTATCGCCATTGCTTCATCattatcaaacattttggaGAT
CGGCCCTTCATCTTCGACGTCTCCAGTCTTTCCAACTAAACTTGCTATTG
AGCCAGTCATTCAGACCGCTAAGGCGGTAGATGCTTTCAGTAAATCGTCA
AGTGAGCATCAATGGAACAGGTCATCACTTATTTCAACAATTACTCCATC
AACAAAAACAATGAggcttttttcaaatgatcaaaATCAATCAACATtct
tattggcaaacattcaaccAACCACATCTGCACACCTTTCCCCCACCACC
ACCAACACCACATCACCTTTTCCCATCACCTCTTCATCTGCTCTCATCTT
TGCAAACGAGAAAGACAATCAGAACCGCACATCATCTAATGTGTTACACA
CCACAGTAAGTGCTCCAGTGATGTCATCAACACCACTTCTTTCAAAAACC
ATCCTCGTCACGGCGAGTACAACGAGATTCGAGCACCAAACTTCTTCTAC
ACTGATTGCACCTTCGACCTCTCAAATCATCCAAGCTGCAACTTCCGCAA
CGAATTCATCCATCTCGTCTAAGAAAACTAAAACACACTGTCCCTCTGTC
AAGATCAACGCAGGAGAGAAAGGTCTTTACAATGTACAAAGAACACCCAT
TGGTGAAATGTGGCGTTATGAATGTTATTATGGTGGAATCAACCCCTCAT
CCAAAGCAAATATGATTTGTGGAAAGAATGGCCTGTGGGGTGACTTGGAT
ACTTCGCTCTGTCTCACAAAATTGGGAGTGAAGAATATTATTCATGAAGT
TGGAAGACTTCATCAAACCCTCACAGTGGATAACTCAACACGATTCGCTC
ATTTTTTGGCAACTTCACTGCGTTACCACAGAGAAGAATTGATCAAGGTC
TCTTCAAATCTTCAAGTCATCTTCGAAGCTCTCCAAACATTGTTCAATGT
TGTCCAAAACAAAAACAGTAGAGAGAAGAATTTGTCGAACCTATTCAACA
TTTTATCAGAGGTGGTGCAAGTCCCCGCCAATTTCTTCTTTGCTTCTGTC
TTCAAAAGTCAACTGCAAACAATGCTCCGCAGGCTCAAAGAAACCTTCAG
AAAGGAAAACCCGACTTTCGAAcatttcaacaaaaacatgGCGTTGAGTG
TGCATCAACTGAAAGATAACTCCACCAACGAATTCAACATAACTTTCAAA
AACCAATTATCTCCTTCTACACTGATCTCCTTGGACAAGACAACCCCTTC
TATCCAAACAATCGAGATTCTTGCGTACAAAAACACAACATTATACCCAA
CAAAGCTTTCAGAAGGGCGACATTTGATTTCTGACATCATTTCACTGAAC
TTGCTCACCGTTGGCAACATCCGTGAACGAAGAGACAGCGACCACACCAA
ACGCAACAATATGACCCTTTCCTTCGTATTCTTAGTGGAACCATCGAGAA
TCTCGCCTCGTTCCATCTCCAAATGTGTCGCATGGAACTCGAATGAAGAT
GTTTGGTCCACTGAAAGTTGCACGACCTATCCCGAACAATTCAACTTGAA
AACAAATGATATCGCAATCCCTTGTGAGTGTCACTTTCACGCGGAAACAT
CTCAAGTATTTGCTGTCATTGGTGACGTAATATCATCTCCTTCGGCTGCT
GGCTATTCCGCCATGTTCCATTTTGTCGCGTTTCTTTGTGTTCTGTTTAC
ATTGCTGTTTCTAGGAGTGACAACCATCACCTATGTCGCCTTCAGGGCTT
TGAGAAAGGAGCGGAACTCGAAGATCATCATCTTTCAATGTTTATCTCTC
ATTATGGTCGCCCTCTCTTTCGTTGCGGCGCTAACGTTCGTCAAGAAAGA
GACATTATGTTTCATAGTTGGTCGATTTTTGCATTACTTCATCTTGACTT
CTTTCTCATGGATGTTCATACAATCCATCTTGTTGTATCGCGCTATCGTC
GTCATCTCGTTACGTAGAATGAATGGATTATATTTCAAAGCTATCGTCCT
CGCTTGTTCAGtaGTGGGTGCATTGACGTTCACGGTGATTGGTGGAAATT
TTGAGAAAGACAAACCACCTCCTCAACAAATTTGTTTTGTGAGTGGAATG
AACTTCTATTTGACGGTGCTCTTTCCGTCCATCCTCCTCATCATCTTGAC
AGTGTCGTTCTTCGTGCCTGTTTTCAAGAACGTCTTCATGTTGGAACGTA
TGATGAAGAACTCCATCGAGGCTCAACGCGATGAAGACTTCAAAAGAGCA
CAGTCAGCATTTATCATCAATGTCGTTATCATTACGTCATGGGTGTGCGG
AATGTTGGGATTCTATTTTGATTCAATGGTCGTCAAATACGTGTTCTGTG
GGTGTCTTGTGGTGTGTGGCTGCGTTGTGTTTTACCTGCACGTTTTTCTG
AACAAAGACGCCTTGTTGAGGTTAAAGAAAGCGAACGAACATTGCTGTTC
CAAGAATTACCGCGTCAAAGATGAAAAAGTGAATGGCGTGGAGGATGAGA
AAGTGAAATTGAGAGCAAAAGACTCGTTCCACTTCAATGAAACTATCGAC
CGCAACAAACGGTctgGTGCATTGCTTAGTGATGGTTGGGTGTGAAACAC
GCATGCGTAGTGATGGTAGGTGTGAttggaaatgaaaaagaagacgttGG
TCCAAACTGGGAAGTTGGCGCATGTCATTAAAGATGTACGAGCTATGTTG
TCGAAATCGAcagaaaataaactaaaactgaTGGGAAAACTGACTTAAAT
TGTTGAAATCATCTCAGCCCTGTGCAAATATTGACTCGTTATAAATCAGC
TTAATTTATGAGAGTAAATTTTTATCTCTAGAGGAAGCTTTTTTGAGTTC
TACCTATGATTTGTAGATTTGTTTTATCTTTACTATTAATgtgttaaaaa
gaaaatataatctTTGTTCGTTTTCTTTAGACTTTTTGTTCCATTTTGTT
GGGTCTAAAGTTAAGAGATCATTATTGGGTGGAAAGAGTGGAAAATGCCT
CTTCCAACTGACAAAACTTCTTAAGATATTAATTGTTTGTCCCGCCACTC
TCTTGGAGCTAAGCATGTGTATCTTTCAACCACTGAGCTAACGGTATTAA
AACTTCAATTTGGATTGAAAGTTATTTTGCATGATTGTCGTGAATGAAGA
CGCGAGAAAGATTTGCAAAAGTTGAAAGCGAGCTGTCAGTGAGATGAAGG
GAAATTTGCAAGAATGTGTCAtcgaaatttcttttctttatttattgAAG
AGCTGGTTGAGTCACCACACAATGCACAGAATTTCATCATTT
Run BLAST on NCBI

transcript from alignment at sc0000051:730853..740950+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005164 ID=TCONS_00005164|Name=TCONS_00005164|organism=Clytia hemisphaerica|type=transcript|length=10098bp|location=Sequence derived from alignment at sc0000051:730853..740950+ (Clytia hemisphaerica)
ATCAAACTTTAATTTGTTAAGGAATTCACAAAAAAAGTGATTGCTATTCA
TCATTTGAATGAAAACGTCGTTCAATTCAGCCATTGTTTTTATCGGTTTT
CTGTACGTCAAAAAATATGGGAGACAACATTGCTCTTTTTGAACGAAAGA
AATGGTGAAACACggaaaaatgttctcaaatttctTCTTCTGTCTTTTGC
TGGTTCAAGGTATTCTTATTTGTTCTTTCTTTATTCCTTGTAAAGCTTTC
AGCTGTGCTTTCTACTTCACCTTCCTCATTAATCCAGTCTCAAAGGTAAA
GCAGCTTACgactcttttgttttcaaaagtcaacattattttttgaagaa
cTCCAAACTTTTCCTTTATATTTTCACTTGGAATCTTTACATAAGCTGTG
ATGGTCGCCATGGTTACAACCATGGTATTTAAATAACgtaaatctttttg
ttttgattttcaagcTCAAACAAAGGTGAAGACTGTTTCCAGCAACTTTT
CTCGTATTCCTCAACTTAATGGATCGTCTACACAACTTTATTCGAATGCA
AGTTTGCTTCAAAATTCTCAACCACAACCACAACCACAACCAGAAAGAAC
AGAGTATTACGGGAAACAGAAAATGATGGACTCAGCGACTTTTGCAATGT
TGGCAACCTCAATTCTGGCTTCAATTTCACTTTCAACTTCAAACGTTCAT
CAACCATCTACAGACATGTTACACCTTAAACCAAGCATGACCACAATAAT
GGAAGACCAGCTTCTTATGACCACACAAACACCTCTCCCTACTTCCAGTG
ATGGCTTTTTAACAAAACATTCTTCTATCAGTCAAAGCACGCAGAGCGCG
TCATCGTCGCCGTCGTCGGAGTCGTCGTCATCGGCGTCAAATGTAGTCGT
TCAATCTTTTAATGGTAAGAGCTATTATATTTAAAGTTAGTTCATCTAAT
CTTTCAGCTCACACAAATAGAGACTTaaacgcatgcgtaatttatcCTTC
TTTAAACCGCTACTTAGTCGTTAAATAGCGTAAAgtacaaaaagtaatga
atagGTAGGGGGGTAGTCAAGGTCCGGGTTTgggacggcgaaatatgtcg
ttctttgatagttagggttagggtttgtcgttctttttgtcgctttttaa
tagttatttatCGTTCATTTTTGATGGTCTGAAAACGTTAGATAAATAGT
CTCTTTAGACAATTAAATCTATTTAATTGACAAGCtgcaatcagggacaa
aatatttggcacaaaagggaaattcaccggggtgttttgaaaccacaatc
gatttgtaagtgctctaaagtaggaccttaggatctgaggatccaaaagt
tcaaaaatggtctagtagggcttgaaatatagcctagaaacccataaatc
cctcccagatcgaaataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccctccc
agatcgaaatacttgatgaaatcaagttgaaggcctaaaaattgacattc
tcgctcgaacttcaattttcgaaaaattgtaaattagccaaaagtgcgag
tatattatgaccctgattgtgCATTAAAAATGAGCTTATGATCATTTTTA
AAATTCGCTTTTTCTggcctttttttaatttccacaAAAATGAATCATGA
ATCAACTCTTAGGATCCATTTTCACTCTTAGATACACATGATGTTAACAT
GGATGAAATAGGGTTGGTTAGAAGTACTTCAGCTATCGCCATTGCTTCAT
CattatcaaacattttggaGATCGGCCCTTCATCTTCGACGTCTCCAGTC
TTTCCAACTAAACTTGCTATTGAGCCAGTCATTCAGACCGCTAAGGCGGT
AGATGCTTTCAGTAAATCGTCAAGTGAGCATCAATGGAACAGGTCATCAC
TTATTTCAACAATTACTCCATCAACAAAAACAATGAggcttttttcaaat
gatcaaaATCAATCAACATtcttattggcaaacattcaaccAACCACATC
TGCACACCTTTCCCCCACCACCACCAACACCACATCACCTTTTCCCATCA
CCTCTTCATCTGCTCTCATCTTTGCAAACGAGAAAGACAATCAGAACCGC
ACATCATCTAATGTGTTACACACCACAGTAAGTGCTCCAGTGATGTCATC
AACACCACTTCTTTCAAAAACCATCCTCGTCACGGCGAGTACAACGAGAT
TCGAGCACCAAACTTCTTCTACACTGATTGCACCTTCGACCTCTCAAATC
ATCCAAGCTGCAACTTCCGCAACGAATTCATCCATCTCGTCTAAGAAAAC
TAAAAGTGAgctttttttacgtttttcctcttttcaataCACCTTTATGC
ATGCAAAAGAAGTTCGGGCTTTAATTTAACGGGGTCAAATGCTAACCTGG
TTGCCATGACCCAGCCATGAAGCTAATTGTATGTATGTCAAGCTAATTGG
ATTTTAACTGATTGGGTTAAGTTTAGGTTGGAAAAAGAGGTCTCCGTCAT
CGACGAACTCCTTTGAATTAAAAGATCCGAGTTAGGCGTGATTTTGACAA
TGGCTAACCAATATAACAATTTAGCTGTGGAGTTTTAGCAAGAACTTATT
AAGCAGTAACCTTCatttgagtctgctaaatcacgCGGCTATACGCGCCT
CCACGCCCTTATAATTTCACACGCCCTCGATTTCATTCAAACACAGAGGT
ATTAATCCGAGTTGATCaaaatcgagtttttttcaaagaattttcgaact
actttttcaaacacctaatgtatgatagctcaaaattcaagttagagcat
cttctatacgattaaaaaagaatgaacaaaaaatataaattctgAAGCTC
ATAATagctcgacaaacctgtatactgtTTTTGGTGCACCCAGGCTGAGA
TTATGCTTAACAACACCCTTGATCCCAGACCTTCTTAaaacgctattgat
gattctgatggacgcgttgatgGCGGATGCAACACTTTttgcactttatt
gcaaaatgtctttttttgctgatttctacTGACGTCAGCAAGATTTGAGG
AAAAGTTTTATGCAAAAATTATCCCTTTAACgatatgcaactttggtcca
aaatttcatgcttatACCatcagccaaactggagttattcaaaaaacaag
ttttactgacattttttggtttttgtctaATATCGTTTTCTTAGTGAACA
AGGAAATTATGGAACAGCCATTtcagtgatctacactccaatatgcttct
ttcgatgtatgaagtgatgGGATTTGACAAGTTTGAAACGGCGATAAAAA
ACTACAGTAAATTTTGGGGACGTGTCTTAATTTGCCCAAGAGGCGCGTAA
GGCACATGTTTAGTAGACTTCCTTCAATTATATTTCCACGCCACTTAGAT
TCTCATACTTTTTTACTTGACATTCCAGCACACTGTCCCTCTGTCAAGAT
CAACGCAGGAGAGAAAGGTCTTTACAATGTACAAAGAACACCCATTGGTG
AAATGTGGCGTTATGAATGTTATTATGGTGGAATCAACCCCTCATCCAAA
GCAAATATGATTTGTGGAAAGAATGGCCTGTGGGGTGACTTGGATACTTC
GCTCTGTCTCACAAAATTGGGAGTGAAGAATATTATTCATGAAGTTGGAA
GAGTAAGTGTCTTTAAATCTAttacccagccggcacacaacgttatttga
acgtttatcgaacgttcacaacgttagatgaacgttgaaacaacgttgtg
tgccgccAGCCCGGTAAGCTTGGTTTTGCATTTTGTTAGATCcgattgtt
taaaatattttaagagaGTTAAGGGGTAGTAGTGTAATGGTTATCAGTCT
TGACTTCCGTGCAGGAAGTCTGGGTTCAattcccactcggtgctgtGATT
CTATTGGCAAATGAATGTATCTTATGAAGTTAGATCGCCGCCAAAATTCG
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
TGCGACGGGACGACTTTTagtacgacgggacgacttgaaggaTCGAATTT
TGGCGGCGATCTAACTTCATAGTATCTTCGCCCGGGctaacccatgccat
gtgaggggaattaaGTACCAtgctctgatacaagagtgtgggggGATATG
CCTGACTCTGTGGCATGGTTGCCAATACTTTTCAGGTTCGACCATGCGTG
GATGCACTGTCTTCCCGAGTCGTTCAAGTAAAGTAACTATACACCATCAG
CTCTGCGTGACGCGAGCACAATTTGGCAAAGTCAGTAAAGCGCAGTGATT
TCCCTATCCTAGGATAGTGAATGCTGTTCTGGATAGGGCCTATCCCGGTC
ACCGGAGGGACTATTTCTGTCTCCAAAGAAGCTTTCCATTATTTGTCTCC
ATAAGCGTTgctggttttttttttctcaataaagTCTCATTTTCAACGGC
AAGGAGTTTTTTAATTAGAATTGACACACGCCCTTTTTTTGTAGCTTCAT
CAAACCCTCACAGTGGATAACTCAACACGATTCGCTCATTTTTTGGCAAC
TTCACTGCGTTACCACAGAGAAGAATTGATCAAGGTCTCTTCAAATCTTC
AAGTCATCTTCGAAGCTCTCCAAACATTGTTCAATGTTGTCCAAAACAAA
AACAGTAGAGAGAAGGTAAGAGAACATTGTTACTTCCCGCCCCTCTTATC
AGGTGGCTCCTCCCCACTCTCTTTGCTTTGAAGGCTGTAAAAAATTCATT
CTCAGAACCTTCAGACGTTGAGAGGCTGGAGAATCCTGTGTTTATTTCCT
GATTATCGTTTATCATTTCATGAATTTGTTCAATTTTGCGTTTAACCAAA
CGTATCTGACTTTACAGTTGAGTTCATCGtcgaattttgttttaattttc
tttattcagAATTTGTCGAACCTATTCAACATTTTATCAGAGGTGGTGCA
AGTCCCCGCCAATTTCTTCTTTGCTTCTGTCTTCAAAAGTCAACTGCAAA
CAATGCTCCGCAGGCTCAAAGAAACCTTCAGAAAGGAAAACCCGACTTTC
GAAcatttcaacaaaaacatgGCGTTGAGTGTGCATCAACTGAAAGATAA
CTCCACCAACGAATTCAACATAACTTTCAAAAACCAATTATCTCCTTCTA
CACTGATCTCCTTGGACAAGACAACCCCTTCTATCCAAACAATCGAGATT
CTTGCGTACAAAAACACAACATTATACCCAACAAAGCTTTCAGAAGGGCG
ACATTTGATTTCTGACATCATTTCACTGAACTTGCTCACCGTTGGCAACA
TCCGTGAACGAAGAGACAGCGACCACACCAAACGCAACAATATGACCCTT
TCCTTCGTATTCTTAGTGGAACCATCGAGAATCTCGCCTCGTTCCATCTC
CAAATGTGTCGCATGGAACTCGAATGAAGGTAGTCTGATTTTTTTAATct
gtttcattttgattttgaattaaattGTTGCGAAATGATAGGTTTACAGG
GCGCTTTATAAgtatttttctcttctcaatTGTTAGGACTCTTTTTTTGC
CTAGTCGCTCAAAACAGTTGATTAAATGCAAACTTTTGGGTCAAAACATT
TCTTCGCAATTTGGATCTTCTTTTCTGAGTTTAACAAATTTTGCCGATCT
TCTTTAGATGTTTGGTCCACTGAAAGTTGCACGACCTATCCCGAACAATT
CAACTTGAAAACAAATGATATCGCAATCCCTTGTGAGTGTCACTTTCACG
CGGAAACATCTCAAGTATTTGCTGTCATTGGTGACGTAATATCATCTCCT
TCGGCTGCTGGCTATTCCGCCATGTTCCATTTTGTCGCGTTTCTTTGTGT
TCTGTTTACATTGCTGTTTCTAGGAGTGACAACCATCACCTATGTCGCCT
TCAGGTAAAATTCAGTCTCCATAGATTCTTTATAGTTTGTCCAGAAAATA
ATTCGTTGTTTTGTTCAAAGAGCACACGATTCGGTCAATGAGATTTATCG
CTGTTTACTATACCACGTTTATAGGGAAtggaaagctttgcgtgaacaaa
aattgcgtgaatcgcgaaaaaaatattgcgtgaatgcgtgattTTGGGAA
AGAAATTTGTGTGGTTgtgtgaattgaaggtccgctggggggtTCTTTAT
AACTTCGTATCTTAAGAAGTTAGATAGCGTGCAGACAACCTCTTATCAAT
CGACAATTTTCAGCCTCTTATCAATCGACTATATTCAGCGATAAATACAT
TAACCCATCATCGCCATGATATTTCTGAAAGTTCTTTGACTTTTTCAGGG
CTTTGAGAAAGGAGCGGAACTCGAAGATCATCATCTTTCAATGTTTATCT
CTCATTATGGTCGCCCTCTCTTTCGTTGCGGCGCTAACGTTCGTCAAGAA
AGAGACATTATGTTTCATAGTTGGTCGATTTTTGCATTACTTCATCTTGA
CTTCTTTCTCATGGATGTTCATACAATCCATCTTGTTGTATCGCGCTATC
GTCGTCATCTCGTTACGTAGAATGAATGGATTATATTTCAAAGCTATCGT
CCTCGCTTGTTCAGGTTTGTAAACTCTATCATTCGTAACTTTCTGTTTTC
AACGATAATCCACTTAGCGATTTACGTAAAATTAACTCATACATTTATCA
GAAAAGTTGTTACAATCGACAATGACAATGACACGGCTGCTCTTTTGTTG
AGAGAATGATTGCCTCTCTTTGGGGTatatactgtaagttggtctgaTGT
TGAAATCCCTTCTCTTATTTCGACACCCTTATTAGAGATGGAAAAAATAG
GAAGTtcggaatcactgatagacaaaaagatttttcctctctgatAGCTa
agcattgaaaaaaatttccgaccttcatattattcctaactctaaagaaa
ggtgtcggaattagcatagggatgtcgatattatttagaccaacttacgg
tagctATTGAAAGGTTTTTTCATCAGGTCGTTCCCGGCTGTGAATTCTGG
TTGATTTACCTGTCTTTCGAATATTTTCTTTCATCTAAGGACTTATGAta
agaatgttttctttttagtaGTGGGTGCATTGACGTTCACGGTGATTGGT
GGAAATTTTGAGAAAGACAAACCACCTCCTCAACAAATGTAAGTCTGTTG
AAAAACACATTTTGTTAGTCGATAAAATGTTCAGGTCTCAATGTGGCACC
TGATGTTTACTAGGTCGTCGAGAGAAGCAAAAGTGACTGTCTAGAGTGAA
TCTTTCCTCAATAAGAAGTCATTTCTTTCATTAAGAAATCTTTTTCAAGA
ACCATTCAACCGAAAAATATAATATGCTCTATTTATCATTTCAGTTGTTT
TGTGAGTGGAATGAACTTCTATTTGACGGTGCTCTTTCCGTCCATCCTCC
TCATCATCTTGACAGTGTCGTTCTTCGTGCCTGTTTTCAAGAACGTCTTC
ATGTTGGAACGTATGATGAAGAACTCCATCGAGGCTCAACGCGATGAAGA
CTTCAAAAGAGCACAGTCAGCATTTATCATCAATGTCGTTATCATTACGT
CATGGGTGTGCGGAATGTTGGGATTCTATTTTGATTCAATGGTCGTCAAA
TACGTGTTCTGTGGGTGTCTTGTGGTGTGTGGCTGCGTTGTGTTTTACCT
GCACGTTTTTCTGAACAAAGACGCCTTGTTGAGGTTAAAGAAAGCGAACG
AACATTGCTGTTCCAAGAATTACCGCGTCAAAGATGAAAAAGTGAATGGC
GTGGAGGATGAGAAAGTGAAATTGAGAGCAAAAGACTCGTTCCACTTCAA
TGAAACTATCGACCGCAACAAACGGTGTAAGTTCAACAATCCTCGTCATA
GTCAgctcttcatttttttgttccCACCTTTTTTTGAGGGAAGGGAATTT
CCACTATATAAAGGACCAGGCATGCTCGACAATAGTATTCGTgaaaagaa
ttttgaccataCACACCCCTTTCTCGCAAACCCGGTGGCATTTTTTGAGC
TTGTGGGGATTGTGGGgatttgaaattctattgttttcgggccagaaaat
tcagttgggctggaaaaaatagcacaatactttaggcgtacaaactttcg
cgagcagaaactttcgcgatttttgcgaattttggcctttttcgcgaaag
taaatgtctttgaaaataaagaagagcAGCCGTCTTTAGcggatttaagg
aatatttttcacttttaaggcgatttttattcgaaaattcttattttatc
caaagattcgcgaaagtttgtgcttgcgaaaaattttttttcctcaaatt
cgcgaaagtaattgtcgcgaatttcgcgatttttcgacctcgcgaaagtt
tctgctcgcgaaagtttgtacgcctaaagtattttgcagtgaggatttgc
ttatctggttATTTCAGTGGAGACAAAATTTACTtataattttccagtgg
gaaggagtctcaatgggtctgtgagaagtcaATTTGTTCCGattcacttt
tttgattttattttttcagctgGTGCATTGCTTAGTGATGGTTGGGTGTG
AAACACGCATGCGTAGTGATGGTAGGTGTGAttggaaatgaaaaagaaga
cgttGGTCCAAACTGGGAAGTTGGCGCATGTCATTAAAGATGTACGAGCT
ATGTTGTCGAAATCGAcagaaaataaactaaaactgaTGGGAAAACTGAC
TTAAATTGTTGAAATCATCTCAGCCCTGTGCAAATATTGACTCGTTATAA
ATCAGCTTAATTTATGAGAGTAAATTTTTATCTCTAGAGGAAGCTTTTTT
GAGTTCTACCTATGATTTGTAGATTTGTTTTATCTTTACTATTAATgtgt
taaaaagaaaatataatctTTGTTCGTTTTCTTTAGACTTTTTGTTCCAT
TTTGTTGGGTCTAAAGTTAAGAGATCATTATTGGGTGGAAAGAGTGGAAA
ATGCCTCTTCCAACTGACAAAACTTCTTAAGATATTAATTGTTTGTCCCG
CCACTCTCTTGGAGCTAAGCATGTGTATCTTTCAACCACTGAGCTAACGG
TATTAAAACTTCAATTTGGATTGAAAGTTATTTTGCATGATTGTCGTGAA
TGAAGACGCGAGAAAGATTTGCAAAAGTTGAAAGCGAGCTGTCAGTGAGA
TGAAGGGAAATTTGCAAGAATGTGTCAtcgaaatttcttttctttattta
ttgAAGAGCTGGTTGAGTCACCACACAATGCACAGAATTTCATCATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002941XLOC_002941Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005164-exon-sc0000051-1491911889:730853..731061TCONS_00005164-exon-sc0000051-1491911889:730853..731061Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:730853..731061TCONS_00005164-exon-sc0000051-1510915933:730853..731061Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:730853..731061TCONS_00005164-exon-sc0000051-1575043694:730853..731061Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:731317..731766TCONS_00005164-exon-sc0000051-1491911889:731317..731766Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:731317..731766TCONS_00005164-exon-sc0000051-1510915933:731317..731766Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:731317..731766TCONS_00005164-exon-sc0000051-1575043694:731317..731766Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:732884..733507TCONS_00005164-exon-sc0000051-1491911889:732884..733507Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:732884..733507TCONS_00005164-exon-sc0000051-1510915933:732884..733507Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:732884..733507TCONS_00005164-exon-sc0000051-1575043694:732884..733507Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:734631..734854TCONS_00005164-exon-sc0000051-1491911889:734631..734854Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:734631..734854TCONS_00005164-exon-sc0000051-1510915933:734631..734854Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:734631..734854TCONS_00005164-exon-sc0000051-1575043694:734631..734854Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:736197..736367TCONS_00005164-exon-sc0000051-1491911889:736197..736367Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:736197..736367TCONS_00005164-exon-sc0000051-1510915933:736197..736367Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:736197..736367TCONS_00005164-exon-sc0000051-1575043694:736197..736367Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:736612..737131TCONS_00005164-exon-sc0000051-1491911889:736612..737131Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:736612..737131TCONS_00005164-exon-sc0000051-1510915933:736612..737131Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:736612..737131TCONS_00005164-exon-sc0000051-1575043694:736612..737131Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:737360..737606TCONS_00005164-exon-sc0000051-1491911889:737360..737606Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:737360..737606TCONS_00005164-exon-sc0000051-1510915933:737360..737606Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:737360..737606TCONS_00005164-exon-sc0000051-1575043694:737360..737606Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:738001..738266TCONS_00005164-exon-sc0000051-1491911889:738001..738266Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:738001..738266TCONS_00005164-exon-sc0000051-1510915933:738001..738266Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:738001..738266TCONS_00005164-exon-sc0000051-1575043694:738001..738266Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:738771..738840TCONS_00005164-exon-sc0000051-1491911889:738771..738840Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:738771..738840TCONS_00005164-exon-sc0000051-1510915933:738771..738840Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:738771..738840TCONS_00005164-exon-sc0000051-1575043694:738771..738840Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:739047..739528TCONS_00005164-exon-sc0000051-1491911889:739047..739528Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:739047..739528TCONS_00005164-exon-sc0000051-1510915933:739047..739528Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:739047..739528TCONS_00005164-exon-sc0000051-1575043694:739047..739528Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1491911889:740222..740950TCONS_00005164-exon-sc0000051-1491911889:740222..740950Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1510915933:740222..740950TCONS_00005164-exon-sc0000051-1510915933:740222..740950Clytia hemisphaericaexon
TCONS_00005164-exon-sc0000051-1575043694:740222..740950TCONS_00005164-exon-sc0000051-1575043694:740222..740950Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:730853..740950 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.440498	3.42065e-08	0.0287655	0	0.226653	0.11533	0.0245909	0.0405728	0	0	0.11604	0	0.975347	1.5226	2.067	0.965043	0	0	1.36196e-07	1.64366e-07	0	0	0.254854	0.746937	1.17695	0.000196684	0	0.0217476	0.0161885	0.0181216
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005164 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top