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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005159 ID=TCONS_00005159|Name=TCONS_00005159|organism=Clytia hemisphaerica|type=transcript|length=902bp
CTGCAGAAAAGCATATCAGCAGAAAGACGATTAATTCTTGGATTCCATGT
AAAGAGGTTTGGTAAGCACGTGTTTCAATAACGTTTGTGAGCATTTTTTA
TCACTGTTCATATTGGCTATGAGGGACGTTCTGGGAGAACCTCTCGGTGA
AGTTCTTGGTGTGACTGAAGGACTTCTGGTCAGAGTTCCGTGTGTTTGGG
AAGAATCGTACGAATCTGTGTCTCGTCCCAATGTTGGATATTTCTTCAAG
TAGAGGCTGCTAAATGTTTTACTTTTCATGAACAatttcaaaacactttt
tctgaaTTTCTTGTTCAGTAAAGAATACAATATGACGTTAACGCAGCTAT
TGAACGTATGCAGAACTTTCAAAACGAGGTTGGCGTCGGCAGCTATTGCG
TAATCCACTGGCGGTGGTATTAACgtactgaatgaaaatgacgTCAGAAG
GAGGTCACGTGGGAAAACACAACAGATGAAGAGCACGCCCATCGACGTTA
AACTGAGGCTTGAAGGGCGTGGCTACAGCTCTATCACGATCAATGGCCAT
TATCAAAATGATCCCAAGAGAAATCATTGTAAACAACGGACCCAATGTAG
GTATAATTTTACACATTGTTTCACCCATATTGAAGTCATTTTTGCGGACG
ATCATATAGATGTAATACAGAGGGTTGGTGATGGACGCCACAAAATCTAC
CACACCCAACATGAGCATCAAACGTTCAAACTTCATGAACCGTCTCCTTC
TTTCGTTACCGGCAATTCCGTACACATAAATAACCAACGCATTTCCAATG
CTCCCTAGGATAAGGATCAACGAAAATGAAATCAAACTGAATCTTTCGTT
TGCCAAACTCATCGCTCCTTTATTCCTCAGTGATGTGTGTGTTGTGTTCT
GC Run BLAST on NCBI transcript from alignment at sc0000051:718787..719993+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005159 ID=TCONS_00005159|Name=TCONS_00005159|organism=Clytia hemisphaerica|type=transcript|length=1207bp|location=Sequence derived from alignment at sc0000051:718787..719993+ (Clytia hemisphaerica)
CTGCAGAAAAGCATATCAGCAGAAAGACGATTAATTCTTGGATTCCATGT
AAAGAGGTTTGGTAAGCACGTGTTTCAATAACGTTTGTGAGCATTTTTTA
TCACTGTTCATATTGGCTATGAGGGACGTTCTGGGAGAACCTCTCGGTGA
AGTTCTTGGTGTGACTGAAGGACTTCTGGTCAGAGTTCCGTGTGTTTGGG
AAGAATCGTACGAATCTGTGTCTCGTCCCAATGTTGGATATTTCTTCAAG
TAGAGGCTGCTAAATGTTTTACTTTTCATGAACAatttcaaaacactttt
tctgaaTTTCTTGTTCAGTAAAGAATACAATATGACGTTAACGCAGCTAT
TGAACGTATGCAGAACTTTCAAAACGAGGTTGGCGTCGGCAGCTATTGCG
TAATCCACTGGCGGTGGTATTAACgtactgaatgaaaatgacgTCAGAAG
GAGGTCACGTGGGAAAACACAACAGATGAAGAGCACGCCCATCGACGTAA
TGATTTTCAAGATACGGTTTGTTTCTTTTGCTCGATGTTGTTTCATCTTC
GGACATTCAATGGTGTCTTTCGTTTTCAACTTTCTGAAGATTCGGAAGGT
GGTCACAACGAAGATGGTGAGGAAAATGAGATCGCTGCTTAAGAAAAGAC
AAATTGCGAAAATGTTGTACTCTGTATCCGATACTGGTGCACAAATTCTT
CTGTTAAAATAGTTTTGTATTTTCAGTTTGTAAACATAGGGGGTGATGGT
TAGGACGCACAAGAGAACGGTCAACGCAACAGCTTTGTAAATACTTTTCA
GGTTAAACTGAGGCTTGAAGGGCGTGGCTACAGCTCTATCACGATCAATG
GCCATTATCAAAATGATCCCAAGAGAAATCATTGTAAACAACGGACCCAA
TGTAGGTATAATTTTACACATTGTTTCACCCATATTGAAGTCATTTTTGC
GGACGATCATATAGATGTAATACAGAGGGTTGGTGATGGACGCCACAAAA
TCTACCACACCCAACATGAGCATCAAACGTTCAAACTTCATGAACCGTCT
CCTTCTTTCGTTACCGGCAATTCCGTACACATAAATAACCAACGCATTTC
CAATGCTCCCTAGGATAAGGATCAACGAAAATGAAATCAAACTGAATCTT
TCGTTTGCCAAACTCATCGCTCCTTTATTCCTCAGTGATGTGTGTGTTGT
GTTCTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005159-exon-sc0000051-1491911889:718787..719282 | TCONS_00005159-exon-sc0000051-1491911889:718787..719282 | Clytia hemisphaerica | exon |
| TCONS_00005159-exon-sc0000051-1510915933:718787..719282 | TCONS_00005159-exon-sc0000051-1510915933:718787..719282 | Clytia hemisphaerica | exon |
| TCONS_00005159-exon-sc0000051-1575043694:718787..719282 | TCONS_00005159-exon-sc0000051-1575043694:718787..719282 | Clytia hemisphaerica | exon |
| TCONS_00005159-exon-sc0000051-1491911889:719588..719993 | TCONS_00005159-exon-sc0000051-1491911889:719588..719993 | Clytia hemisphaerica | exon |
| TCONS_00005159-exon-sc0000051-1510915933:719588..719993 | TCONS_00005159-exon-sc0000051-1510915933:719588..719993 | Clytia hemisphaerica | exon |
| TCONS_00005159-exon-sc0000051-1575043694:719588..719993 | TCONS_00005159-exon-sc0000051-1575043694:719588..719993 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000051 | supercontig | sc0000051:718787..719993 + |
Blast
The following BLAST results are available for this feature:
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