TCONS_00005154 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00005154
Unique Name	TCONS_00005154
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	5719

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000051:688620..700384+
coding sequence from alignment at sc0000051:688620..700384+

transcript sequence

>TCONS_00005154 ID=TCONS_00005154|Name=TCONS_00005154|organism=Clytia hemisphaerica|type=transcript|length=5719bp
atgggccattccagaatttgtctgtaacaggggggcggacgacacaggat
ttccgagggcaaaagttttcaccaaaattcgaaatttccaaggcgagaga
agaaaatgtatgaatttccaaggcaattgaattaaaaaaggcaaaaaaga
gtggaatttccgatgcattttacaaaagtacatggatttttatcagaatt
tccgaccaccactggaaaaaaaaaattatttctgaggctagaaaaaatta
aaagatgcacgtcgtccgacggggggtaacaaaaattttctggaatggcc
caatcacGATCAATCAATATACCTAAATAACTGCCTAATAGTCTACCTAA
ATTGACATTatattcaaaatgaagctgtATTTCCACATCCACCTGGGAGG
CCATCACAATCACAACATTGTGACCGCGGTTCTTCAATCAGATGAAAAAC
TCGAATTGAAATCTTGTCTTCAGAAGTTGTGTGCTCGTCTTAATGATCAT
GCTAAAACTTCACTAAACACCAAATATTTGGAAGTATCCTTGAAGCAAAA
AGTTTTGGAGATGGACACTGACCTTTCAAGCCTTCAAAATGGTTGTGATT
TGAAGGTTGTGGTTCAAACCAGTGTGTGCGACACTAGTACGAAATATGAG
AAGACTGTCATCAACAAAGATAAAAGTGCTCCGTtaaaatcaagtaaaaa
aaCTGTTTCTCAAAGTACCGATGAACATGAGGAGCTATTGAAGAAGGCAG
ATGAGCTTATATCTAAAAGCATGAACAATGCAGCATTGGCAATTTATAAA
GAGATAATTTCTTCATTAAGTAGTAGTTATGAAGCTACATTCGGAATTGC
TTACATCCTTTTCAAAGCGAAACGTTTCAAAGAAAGCTTGACTTATTTTG
AGAAACTTTTGAACATTGACAATTCCAATGATGTTGTTGTGTTGGATTAT
GCTCGAAGTTTGATTGAATGTAAGCATCATAAACAGGCTCTTAACGTTTT
ATCTCGCTCCATTGAAGATCTAAAACGTGCGGGTAAAGTGAAGGCTGTTT
GCAACACTAATGTTGTTTTAGCTGAAGCCTTGGAATCAATGGATGAAATG
CAAAAcgcttttcaaatttatttgtcAGTATCTCAAATGACAGAGAAGCA
AAACGTGGACGCCTTGTTGGGTTATGCCAGAGTTGGATATCAATTGGGAC
TCGTTTCACTGGATGACGTTTTCATTGTGGTTTTGAACGCCATTGCTCTC
CGTAAAAATGATGTCAAAGTTCAGCATTTCTTCGCTAAGATGGTACAACA
GAAAAACGGAATGGAATGTCTGCAACGTCAAATGAATGACGCATGGTCTG
ACGTCACTGCAGTTGTTTATATCGCCACCTTTCTCAGAGAGTGTGGTGCT
ATCGATGTTTGTTTGAAGCTGCTCGAGCATGCGCTTAGATTAGCACCAAA
AAGTATCGATGTCGCTCTTTTGACCGCTCATGTCTTTGAAAACAAACGCG
ATTTGAACGCAGCGTTAAAGTTTGTGGGGGATTTTATTGACAGTAAACAC
GATAGACAAGTGTTGAGAAAGATCGATCTCAGTAAATTTACCACCGTAAT
CAAGTCATACTTATCAGACAGCACAAGCGAGCTGACACCGTTCGAAGTGG
AGCCAAAAGAGCCCTCACCCACTGGGAGCATGGCAAATGTGGAACTACAA
TTATTGGCTCTCTACTTCACTGTCATCAAAATCCTTTTTGTGGAAGGAAA
AGTTGAAATCATCCCCTCCCTTGTGAAGTTGATGAAGCCATTATTTACCA
TGCAGAACGATCTGCATAAAACCTTAATCCGAAACGAGCAAGCTTTCTTC
TCATGCATTGATCAACTCATTGAAAGTCCCGTCACTTTCAACACGGCGTC
ACCCAACAAGCTGTACGTCATTGGAGATAGCCATGTGTTACCTATCGCCT
GGCAAACCGTCAAGATCAAGGAGAAAGATTATATGACCAAACCAATCCTC
GTCACTGGACTGAAAATCTGGCACCTTCGACAAGAATCTCAGTTCTACAC
CAAGAAGTGTTTTGATACATCCATACAACAAATGGAAAGTGGAACGCCAt
gtcttttcatcctcggtgaAATCGATTGTCGAGAAGGAGTTCGAAAAGTT
GTCGAAAAATGTCTTTACGATTCTGTGAAAGAAAGCATCGAAGCTTTAGT
TGATATTTACGTCAAAACAATGTCGAGCGTGAAGAAACGCAATAAATCGA
ATGTTTACGTCCACCCTGTGCCGTGTGTGTTGAAGGAAACTTGCGACATC
GTTATGCAGTTCAACTCAATCTTGAAAGAACGAGTTATGAAAATTGCAAG
TTTAACTTGGTTAGATTTTATGGACCAATTGATTGATGAACGAAGCGGAT
ATTTGAAGGAAGAATATTCATTTGATGGCGCTCACATCCACCCCAAATAT
ATATCTGTTTTGCAAGAcacttttgaaaaagtccaataaaTGATCCGCAT
CACAGGGTAACTGGCTGACTCGAGAAAACTGTAAGATCCTGAGATATtta
gatttaaaattattttttaaatgaatataaagtaAAAAGACTTTAATGCC
CTGTAATgatgattttttcacatttatgAAAGTCGCTTTTCGATTTTTAT
AGTCCAATACTTTCCTAACCATACAatgataccgggtgcgccacaaaaaa
gtttctctctttaaaactaattttctcaaaatctaaaagttttaaaagaa
ccgttcctatttcattggaaagaagaaagataaacttaaattttgatggg
tcatttattaaattcgattcattagatcaaaagttatgctcaattgaatg
aaaaagttactttcggaaaatgctcaaaaacgttaaaaatcgacctatca
aattaaacagaagcataattacatgaattttaccagattatttggccttt
ttcgacgaattctCTTCCTTTCAtcgaaattcaaccttcctacATCAGTA
TTttggtttcagtcattaaaaatgataattagctgtctaaatgacctttt
gttatttaaaggaaggttgaatttcgaTGAAAGGAAGagaattcgtcgaa
aaaggccaaatatGAAATAATCtgataaaattcataaaaatgcaTCAAAT
ataggtttcgaggtagatccagccttacatagactttatccagtctagaa
ccaaaaatctgaggaaaatttcggtaaaagtaaattaaattgattttgat
gaaggttttaaaccctctaacccttcagtttcaaaactTATGtgttttgt
tattgaaaaatgctcttaatcatgtaaaggctattgcaattgccaaattt
aaagtaaaaatttgataggtcgattttaaagttttcgagcactttctgaa
agtaacttttttattcaattgagcatagcttttgatctaatgaatcgaat
ttaataaatgacccatcaaaatttaagtctatctttcttctttccaatga
aataggagtggttcttttaatatttttagatttcgagaaaattagtttca
aagagagaaacttttttgtggtgcacccgATAGTTTTTTGAAACCAACTA
TGCTTTTTCTTAAGGAAAACAACAAATTCCTATCCACCACAAAACGTCGA
AATCTTTCATAAGTTAGTAGGTATTTTTCAAAGTAGTAAATGTAAGACGT
ATTTTAGACGTAGCGGATACTTTCAGTTTCTTTTTCGTAGTCGTAATTGC
TTTGTCGTAGAGACATAGGAATATCTATTTTTTTAACGGTGTCCTTATTA
AACTGTACTTTTTTCGAACAAATGATTACGCGTATTGTTTGGTCTTTCGT
TTCTACTTCTTCTCATTTGATGATACTAATACCTTAAGAAAACTAATTTT
Cggtggaactaatttttgcggaactaatttttgcgattttggatgtttac
cgcgaaaattagtcccgcgaaatgcaatttctcctaaaaatcctcaaaaa
cccCTAGAAATACGAAAGAATATCGGTAAAAAGGGGATGtcaaccgcaaa
aattaattccatAAAATGCGCCAATTTAGTACCGTCGTAATGTGAAAATA
AGTTCCGCGAAAAGGAGTTCTCTTAAGGTAGTCTAGAATATAGATATCTT
TTACAATGCTTTATTCCAATATAGATTTTGTCATAACATagttcaatttc
aattttaatttttacttCTTTATTCAATATGTCCATTGTTATTCAGTTGA
ATCATTTTCCATGACCTTCTTTTCCAAAGAGACCTGCTGCTTCGGACGTC
GGTATGGTTGTGGGGTCGGTAGTGGGTGGGGTCGATTTGCAGTTAAAATT
ATCCCATTCCACAACTTCTGCGTGTATTTTATCACAGTAGGACCCGTAAC
ACCAATTAGATTCCTCGTCAAAACCTTCGTCCATTGTTTCTCCGGGTGCA
TAGAATTTTCCATCATCCCCCAGGCAACCACGGGGTGTTGTCATAGGAGG
GGTTGTCATGGTTTCTGTGGTTGTTGGGGGAGTGGTTTTGCAGTTGAAAT
TATCCCAGTGTTGTATTTGGCCATGTTGGTCGCAATATGTCCCATAACAC
CAATTTGTTTGTTCGTCAAATCCATCGTTCATCTTTTCTCCCGGTGCATA
GAATTTTCCATCATCTCCATAGCAACCAAGTGGCGTTGTCATGGGAGTAG
TGGTCGTTGGAGTTGTGGTCGTCATAGGTTCCGTGGTTGGGGGAGTTGTT
TTGCAGTTGAAATTGTCCCATTTAATCACTTGTCCATGTTGATCACAATA
AGATCCATAACACCAATTTGTTTGTCCATCAAACCCTTCGCTCATCTTTT
CTCCAGGTGTGTAGAATTTTCCGTCATCTCCATAACAACCATGTGGCGTT
GTCATGGGAGTAGTCGTCGTTGGAGTTGTTGTCGTCAGTGGAGTTGTTGT
CGTTGGTTCAGTAGTAGGTGAGGTCGATTTACAGTTGAAGCTATTCCATT
GAATAACTTGTCCATGTTGATCACAGTATGATCCATAACATCCATCGAAA
TCCTCGGATATCTTTTCCCCAGGCGCATAGATTTTACCGTCATCTCCATA
GCAACCTTGCGGAGGAGTTGTCATGGGCTCAGTCGTCATAGGCTCCGTGG
TTGGGGGAGTCGTTTTGCAGTTGAAATTGTCCCATTGAATAACTTGTCCA
TGTTGATTGCAATAGGATCCATAACACCAATTTGTTTGCTCGTCAAACCC
TTCGCTCATCTTTTCTTCAGGTGCATAGAATTTTCCATCATCTCCATAGC
AACCATGAGGTGTTGTCATGGGAGTAGTTGTCAACGACTTTGTAGTAGTT
GTGACAGGGGGTTTAGTGGAGCTGATGATTTCATGGCATCTTTCGGGAAG
GCGGTTCAATCTTTGAGTGATTTTCCCTCTCGGTGAACACCTGATTTCTA
GACAGCGGTCATNTTAGTGGAGCTGATGATTTCATGGCATCTTTCGGGAA
GGCGGTTCAATCTTTGAGTGATTTTCCCTCTCGGTGAACACCTGATTTCT
AGACAGCGATCATCTTTGTATACCGACTTGATGAAACCtcctggtctgta
aaattgatGGTTATATTTACATCCTCGAGCTGTCTTATGATCTAAGTTTG
GAATGTCAGGGAAAGTGAATGTGGGTCTGCTTTCAAATCTTTTGACCATT
ATTGACAAGATGGTCAACC

Run BLAST on NCBI

protein sequence of TCONS_00005154-protein

>TCONS_00005154-protein ID=TCONS_00005154-protein|Name=TCONS_00005154-protein|organism=Clytia hemisphaerica|type=polypeptide|length=706bp
MKLYFHIHLGGHHNHNIVTAVLQSDEKLELKSCLQKLCARLNDHAKTSLN
TKYLEVSLKQKVLEMDTDLSSLQNGCDLKVVVQTSVCDTSTKYEKTVINK
DKSAPLKSSKKTVSQSTDEHEELLKKADELISKSMNNAALAIYKEIISSL
SSSYEATFGIAYILFKAKRFKESLTYFEKLLNIDNSNDVVVLDYARSLIE
CKHHKQALNVLSRSIEDLKRAGKVKAVCNTNVVLAEALESMDEMQNAFQI
YLSVSQMTEKQNVDALLGYARVGYQLGLVSLDDVFIVVLNAIALRKNDVK
VQHFFAKMVQQKNGMECLQRQMNDAWSDVTAVVYIATFLRECGAIDVCLK
LLEHALRLAPKSIDVALLTAHVFENKRDLNAALKFVGDFIDSKHDRQVLR
KIDLSKFTTVIKSYLSDSTSELTPFEVEPKEPSPTGSMANVELQLLALYF
TVIKILFVEGKVEIIPSLVKLMKPLFTMQNDLHKTLIRNEQAFFSCIDQL
IESPVTFNTASPNKLYVIGDSHVLPIAWQTVKIKEKDYMTKPILVTGLKI
WHLRQESQFYTKKCFDTSIQQMESGTPCLFILGEIDCREGVRKVVEKCLY
DSVKESIEALVDIYVKTMSSVKKRNKSNVYVHPVPCVLKETCDIVMQFNS
ILKERVMKIASLTWLDFMDQLIDERSGYLKEEYSFDGAHIHPKYISVLQD
TFEKVQ

Run BLAST on NCBI

transcript from alignment at sc0000051:688620..700384+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00005154 ID=TCONS_00005154|Name=TCONS_00005154|organism=Clytia hemisphaerica|type=transcript|length=11765bp|location=Sequence derived from alignment at sc0000051:688620..700384+ (Clytia hemisphaerica)
atgggccattccagaatttgtctgtaacaggggggcggacgacacaggat
ttccgagggcaaaagttttcaccaaaattcgaaatttccaaggcgagaga
agaaaatgtatgaatttccaaggcaattgaattaaaaaaggcaaaaaaga
gtggaatttccgatgcattttacaaaagtacatggatttttatcagaatt
tccgaccaccactggaaaaaaaaaattatttctgaggctagaaaaaatta
aaagatgcacgtcgtccgacggggggtaacaaaaattttctggaatggcc
caatcacGATCAATCAATATACCTAAATAACTGCCTAATAGTCTACCTAA
ATTGACATTGTAAGTAAAATTTTTCTAGGAAAAGGGGGTATTTTAGAAAT
GGAGGAGAGCACTGCTTTTGGATATCTAACTGCCTGTCTGTCTTGGCAgt
tccatcaatatgccaaaaacattttgttcaaccaccttcacttcataAGA
TAggccagacgtccgcgctcgataggatcgatcatcggaatggctcgatg
acggatcgatatgtgatcgatggattacttaacgatNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGC
AGCaaagtagcgagtttataaagcaatagataaacgagtgaataaagtag
ctaAGTAgcaagtttataaagcaatagataaacgaatgaataaagttggg
agtttataaagcaatgcataaacgaatgaataaagtagcgaagtagcaAG
TTGATACAGCagtagataaacgagtgaataaagatGCAAGGTAGAGAGTT
TATAAAGAAATGGATAAACGAATGAATTAAGTAGCAAAATATGTGttttc
ttaaagtttttttagcTTGGCATTTTTGAGTTAGGAAATCTTTTTGGGTC
GCTAAACTTAAAATTCGCTTCGCATTTTGCGAAGTGCgaagctataattc
gaaccctggaatacttttatttatttggattcatgaaaggttcaaggttt
gtttactttttatttcaaattatttcattgatttattgagctgcaatagc
tgattgaaaaacgaagatttttgatagttgtcagcgtgggcttggccgcc
attttgaatttggattttttttctcctgtactcggcaatttagaggttgt
tcgtaatacgcgatttggcttacgcgtaacacaccatttcaccgaacctc
ccaaagtcatttgatttgaacgacgtgttaaaaaataaacgatttctctt
tcgcaccgagtaggcttttaaatcgaaatatgaaaaaaatccatattgaa
acacacgcaaatgtctggaacaaagaagaacaaattagtggcataataca
atggagcgtttgacgtcactcgcgcagcCAAATTACACACTCGttagagt
accctgcccagttggccacagaaattttttattcaaatttttcacttact
ttttacttttttgaaaatccttttcgaccaacagttagacaacttttaac
attcttcgtgtttgttttgattttttatttgaggcgatcttcttagaata
aaaaactttcgaagcgagtggtactagtgcccagttcccgaccgacgtac
cagtctgcAACCGATcgctaaaaagagaaaatcagtgctctacttgcagg
tTAGGTCATATgaattgatcaggatgataaaaaaactcataagctttccg
tatttaatttctttgcactcgttcttttgttttaaaatagctcacttaca
tttcccttcggcatgtttttttagaatttttcttcaagtcaccatttttt
tctaaagtttgtttttgtattgttttgaaagtggcggtctatggagagtc
tttatttgataaaaacgcgggaattttttatgtctaCCCGGAGATTCAAT
ACACCGGtttcctttgttatttcaaTCCAGAGCTAGAAACTTCGCATTGG
AGTTATCAAGTTAAAGACTGCGGGCATGCcccttgaatgttttgatcgca
atgtaaagtcttcttttttttctcagcatCTTTCGATTttgtcggtcgca
gactggacgtctAATTTAGAaactgattgcatcaacttttttatcaatat
ttccgACGAAACCCTATTGAGCtgatttttatagaaatgctttctaacat
atatactcatcgttttggacaagtattttttggagcGGCAGGCGCTCTCT
AACTCTCCAATCGGcctccggtcattttgaatgaaaacaaaaaagttaaa
aagggtgcgctatcagtgaaagttatcgtgacatgttatggcAGAAGAAA
GTATATatgtatgattgataaacttggtggaattatcaaaacaaatttgt
tgtcaaagagatttaacagtaagtgaaaatacaggtcAGATATTAACAgt
ccaagttagagcagttgatggtatcCTCTGAAAATTAGAAGTCGACACCC
ctggaaattgaaattttgtgaaaaagggtcTGGAAAATGATTGTTGATGT
CAGTTTATTATGATGAAgagagaaccccctggaaacctttaataatgccg
cttggaaaatctgaaaaatgaacaaaaaccccttggaaaatcaaggctca
gacccccctggaaaagtttgtcaatactATATATGGTCTAAAAATAGAAT
AGCCCGTTGCATTTCGTTTAGAACCTTGGACGGTCCGGTGGGGTACATTA
TTATCAATTTATGGAATAAGTATATATATGTTGTTTGAATTAAAAATAAC
TTATTCGGAATTAGGGATTTGGGATTCACAATTACGGATTAGGGATTCAa
actttgattgaatttttcaaaaattctaacTTTACGACCTTTAAATTTAA
AAGGAATATATGGTAGAAAACATTCCCAAATTTCATTTCTGCTGAAAATA
ATTGCtcagtgttcgagctgtaaaatTTGCAGGCTGTCGATTTAGGGATT
CGCAAAATCGTCACCGAGTGGCCAACTCAGCCTTGTGTGGAGGAGAGCAG
GCctctgttgaacttttaaatattagAGAATACGTTTAGAAGGACTatta
taaggtctcatttccacTGAAAATGAttgctctccatcgcagtgttcgAT
GACAATATATGGCAAATCCCGAATTCAACAGTGTGCAAATTACCATATTA
CTTTTATTTGAAGGTCATAAGTTAATTAAGACAAATTTGAACGTTCTTTA
CCCtcgtttttcacctttttttaacttttttgaaaaataatattttagca
tttatgCCATAACTTTTTCTCTAGTCGACCaaatttaacaaatgacccct
caaagtttaagtttatccttTCTCTTTCCAAGGCGAAAAGATTGATTCAT
AGAACAGTTCATAGAACttgagaaaattcacttcaaagagggggACTTTC
TTCTAGGACACCCGGTATATCAGAAAAGCATATTACCTTGATTTTTATAT
CTGAGAATGTTTTTTGTGTTTAATCTATTCGCcatagttttattaaaaaa
tcaaaatttaacgaatgttttttatttttatattatattatctACTAATA
TTTGTTGATTTAGATCAGTCAAGTGTAGTGACTGATAGTGATAAAATTTG
CTCACAGACAAAATATAATAttgaatttaaaggtacatatcAAAGTCTGG
ATAACTTAAGGAGGGTAAAGNTCCCAAATTTCATTTCTGCTGAAAATAAT
TGCtcagtgttcgagctgtaaaatTTGCAGGCTGTCGATTTAGGGATTCG
CAAAATCGTCACCTAGTGGCCAACTCAGCCTTGTGTGGAGGAGAGCAGGC
ctctgttgaacttttaaatattagAGAATACGTTTAGGACTattataagg
tctcatttccacTGAAAATGAttgctctccatcgcagtgttcgATGACAA
TATATGGCAAATCCCGAATTCAACAGTGTGCAAATTACCATATTACTTTT
ATTTGAAGGTCATAAGTTAATTAAGACAAATTTGAACGTTCTTTACCCtc
gtttttcacctttttttaacttttttgaaaaataatattttagcatttat
gCCATAACTTTTTCTCTAGTCGACCaaatttaacaaatgacccctcaaag
tttaagtttatccttTCTCTTTCCAAGGCGAAAAGATTGATTCATAGAAC
AGTTCATAGAACttgagaaaattcacttcaaagagggggACTTTCTTCTA
GGACACCCGGTATATCAGAAAAGCATATTACCTTGATTTTTATATCTGAG
AATGTTTTTTGTGTTTAATCTATTCGCcatagttttattaaaaaatcaaa
atttaacgaatgttttttatttttatattatattatctACTAATATTTGT
TGATTTAGATCAGTCAAGTGTAGTGACTGGTAGTGATAAAATTTGTTCAC
AGACAAATATAATATTGAATTTAAAGGCAGGTACACATCAAAGTCTGGAT
AACTTAAGGAGGGTAAAACTTCAGGGACACCATAGAAGTCCCCCTccagt
cacctttcaaatcacgcaatcatgagaaaaaatttccaaatcactttatc
acgagttaaatttcttttctttcacgATCACATTGATCAGATTGGTTCct
ccgatcacgcaatcacatactttaaaatcttaaatcataaacttgaaaaa
atcaagaaaaccgCTGGGGCGTCTCTCAGAACGACCTTTAAGCTTTAAGG
GGAGGGTAAATCAATAAGGGGAGTTTTGTGTTTTAAGAGGGGACTCAAAA
ATTAAGCATTATTAAGTCATGATGTAAATTATTGTTGTAAATTATTGTTG
TTGACATTTTCATTGAATCAGAACGTTTTTTAAAAGgctaacttttttct
tttagatattcaaaatgaagctgtATTTCCACATCCACCTGGGAGGCCAT
CACAATCACAACATTGTGACCGCGGTTCTTCAATCAGATGAAAAACTCGA
ATTGAAATCTTGTCTTCAGAAGTTGTGTGCTCGTCTTAATGATCATGCTA
AAACTTCACTAAACACCAAATATTTGGAAGTATCCTTGAAGCAAAAAGTT
TTGGAGATGGACACTGACCTTTCAAGCCTTCAAAATGGTTGTGATTTGAA
GGTTGTGGTTCAAACCAGTGTGTGCGACACTAGTACGAAATATGAGAAGA
CTGTCATCAACAAAGATAAAAGTGCTCCGTtaaaatcaagtaaaaaaaCT
GTTTCTCAAAGTACCGATGAACATGAGGAGCTATTGAAGAAGGCAGATGA
GCTTATATCTAAAAGCATGAACAATGCAGCATTGGCAATTTATAAAGAGA
TAATTTCTTCATTAAGTAGTAGTTATGAAGCTACATTCGGAATTGCTTAC
ATCCTTTTCAAAGCGAAACGTTTCAAAGAAAGCTTGACTTATTTTGAGAA
ACTTTTGAACATTGACAATTCCAATGATGTTGTTGTGTTGGATTATGCTC
GAAGTTTGATTGAATGTAAGCATCATAAACAGGCTCTTAACGTTTTATCT
CGCTCCATTGAAGATCTAAAACGTGCGGGTAAAGTGAAGGCTGTTTGCAA
CACTAATGTTGTTTTAGCTGAAGCCTTGGAATCAATGGATGAAATGCAAA
AcgcttttcaaatttatttgtcAGTATCTCAAATGACAGAGAAGCAAAAC
GTGGACGCCTTGTTGGGTTATGCCAGAGTTGGATATCAATTGGGACTCGT
TTCACTGGATGACGTTTTCATTGTGGTTTTGAACGCCATTGCTCTCCGTA
AAAATGATGTCAAAGTTCAGCATTTCTTCGCTAAGATGGTACAACAGAAA
AACGGAATGGAATGTCTGCAACGTCAAATGAATGACGCATGGTCTGACGT
CACTGCAGTTGTTTATATCGCCACCTTTCTCAGAGAGTGTGGTGCTATCG
ATGTTTGTTTGAAGCTGCTCGAGCATGCGCTTAGATTAGCACCAAAAAGT
ATCGATGTCGCTCTTTTGACCGCTCATGTCTTTGAAAACAAACGCGATTT
GAACGCAGCGTTAAAGTTTGTGGGGGATTTTATTGACAGTAAACACGATA
GACAAGTGTTGAGAAAGATCGATCTCAGTAAATTTACCACCGTAATCAAG
TCATACTTATCAGACAGCACAAGCGAGCTGACACCGTTCGAAGTGGAGCC
AAAAGAGCCCTCACCCACTGGGAGCATGGCAAATGTGGAACTACAATTAT
TGGCTCTCTACTTCACTGTCATCAAAATCCTTTTTGTGGAAGGAAAAGTT
GAAATCATCCCCTCCCTTGTGAAGTTGATGAAGCCATTATTTACCATGCA
GAACGATCTGCATAAAACCTTAATCCGAAACGAGCAAGCTTTCTTCTCAT
GCATTGATCAACTCATTGAAAGTCCCGTCACTTTCAACACGGCGTCACCC
AACAAGCTGTACGTCATTGGAGATAGCCATGTGTTACCTATCGCCTGGCA
AACCGTCAAGATCAAGGAGAAAGATTATATGACCAAACCAATCCTCGTCA
CTGGACTGAAAATCTGGCACCTTCGACAAGAATCTCAGTTCTACACCAAG
AAGTGTTTTGATACATCCATACAACAAATGGAAAGTGGAACGCCAtgtct
tttcatcctcggtgaAATCGATTGTCGAGAAGGAGTTCGAAAAGTTGTCG
AAAAATGTCTTTACGATTCTGTGAAAGAAAGCATCGAAGCTTTAGTTGAT
ATTTACGTCAAAACAATGTCGAGCGTGAAGAAACGCAATAAATCGAATGT
TTACGTCCACCCTGTGCCGTGTGTGTTGAAGGAAACTTGCGACATCGTTA
TGCAGTTCAACTCAATCTTGAAAGAACGAGTTATGAAAATTGCAAGTTTA
ACTTGGTTAGATTTTATGGACCAATTGATTGATGAACGAAGCGGATATTT
GAAGGAAGAATATTCATTTGATGGCGCTCACATCCACCCCAAATATATAT
CTGTTTTGCAAGAcacttttgaaaaagtccaataaaTGATCCGCATCACA
GGGTAACTGGCTGACTCGAGAAAACTGTAAGATCCTGAGATATttagatt
taaaattattttttaaatgaatataaagtaAAAAGACTTTAATGCCCTGT
AATgatgattttttcacatttatgAAAGTCGCTTTTCGATTTTTATAGTC
CAATACTTTCCTAACCATACAatgataccgggtgcgccacaaaaaagttt
ctctctttaaaactaattttctcaaaatctaaaagttttaaaagaaccgt
tcctatttcattggaaagaagaaagataaacttaaattttgatgggtcat
ttattaaattcgattcattagatcaaaagttatgctcaattgaatgaaaa
agttactttcggaaaatgctcaaaaacgttaaaaatcgacctatcaaatt
aaacagaagcataattacatgaattttaccagattatttggcctttttcg
acgaattctCTTCCTTTCAtcgaaattcaaccttcctacATCAGTATTtt
ggtttcagtcattaaaaatgataattagctgtctaaatgaccttttgtta
tttaaaggaaggttgaatttcgaTGAAAGGAAGagaattcgtcgaaaaag
gccaaatatGAAATAATCtgataaaattcataaaaatgcaTCAAATatag
gtttcgaggtagatccagccttacatagactttatccagtctagaaccaa
aaatctgaggaaaatttcggtaaaagtaaattaaattgattttgatgaag
gttttaaaccctctaacccttcagtttcaaaactTATGtgttttgttatt
gaaaaatgctcttaatcatgtaaaggctattgcaattgccaaatttaaag
taaaaatttgataggtcgattttaaagttttcgagcactttctgaaagta
acttttttattcaattgagcatagcttttgatctaatgaatcgaatttaa
taaatgacccatcaaaatttaagtctatctttcttctttccaatgaaata
ggagtggttcttttaatatttttagatttcgagaaaattagtttcaaaga
gagaaacttttttgtggtgcacccgATAGTTTTTTGAAACCAACTATGCT
TTTTCTTAAGGAAAACAACAAATTCCTATCCACCACAAAACGTCGAAATC
TTTCATAAGTTAGTAGGTATTTTTCAAAGTAGTAAATGTAAGACGTATTT
TAGACGTAGCGGATACTTTCAGTTTCTTTTTCGTAGTCGTAATTGCTTTG
TCGTAGAGACATAGGAATATCTATTTTTTTAACGGTGTCCTTATTAAACT
GTACTTTTTTCGAACAAATGATTACGCGTATTGTTTGGTCTTTCGTTTCT
ACTTCTTCTCATTTGATGATACTAATACCTTAAGAAAACTAATTTTCggt
ggaactaatttttgcggaactaatttttgcgattttggatgtttaccgcg
aaaattagtcccgcgaaatgcaatttctcctaaaaatcctcaaaaacccC
TAGAAATACGAAAGAATATCGGTAAAAAGGGGATGtcaaccgcaaaaatt
aattccatAAAATGCGCCAATTTAGTACCGTCGTAATGTGAAAATAAGTT
CCGCGAAAAGGAGTTCTCTTAAGGTAGTCTAGAATATAGATATCTTTTAC
AATGCTTTATTCCAATATAGATTTTGTCATAACATagttcaatttcaatt
ttaatttttacttCTTTATTCAATATGTCCATTGTTATTCAGTTGAATCA
TTTTCCATGACCTTCTTTTCCAAAGAGACCTGCTGCTTCGGACGTCGGTA
TGGTTGTGGGGTCGGTAGTGGGTGGGGTCGATTTGCAGTTAAAATTATCC
CATTCCACAACTTCTGCGTGTATTTTATCACAGTAGGACCCGTAACACCA
ATTAGATTCCTCGTCAAAACCTTCGTCCATTGTTTCTCCGGGTGCATAGA
ATTTTCCATCATCCCCCAGGCAACCACGGGGTGTTGTCATAGGAGGGGTT
GTCATGGTTTCTGTGGTTGTTGGGGGAGTGGTTTTGCAGTTGAAATTATC
CCAGTGTTGTATTTGGCCATGTTGGTCGCAATATGTCCCATAACACCAAT
TTGTTTGTTCGTCAAATCCATCGTTCATCTTTTCTCCCGGTGCATAGAAT
TTTCCATCATCTCCATAGCAACCAAGTGGCGTTGTCATGGGAGTAGTGGT
CGTTGGAGTTGTGGTCGTCATAGGTTCCGTGGTTGGGGGAGTTGTTTTGC
AGTTGAAATTGTCCCATTTAATCACTTGTCCATGTTGATCACAATAAGAT
CCATAACACCAATTTGTTTGTCCATCAAACCCTTCGCTCATCTTTTCTCC
AGGTGTGTAGAATTTTCCGTCATCTCCATAACAACCATGTGGCGTTGTCA
TGGGAGTAGTCGTCGTTGGAGTTGTTGTCGTCAGTGGAGTTGTTGTCGTT
GGTTCAGTAGTAGGTGAGGTCGATTTACAGTTGAAGCTATTCCATTGAAT
AACTTGTCCATGTTGATCACAGTATGATCCATAACATCCATCGAAATCCT
CGGATATCTTTTCCCCAGGCGCATAGATTTTACCGTCATCTCCATAGCAA
CCTTGCGGAGGAGTTGTCATGGGCTCAGTCGTCATAGGCTCCGTGGTTGG
GGGAGTCGTTTTGCAGTTGAAATTGTCCCATTGAATAACTTGTCCATGTT
GATTGCAATAGGATCCATAACACCAATTTGTTTGCTCGTCAAACCCTTCG
CTCATCTTTTCTTCAGGTGCATAGAATTTTCCATCATCTCCATAGCAACC
ATGAGGTGTTGTCATGGGAGTAGTTGTCAACGACTTTGTAGTAGTTGTGA
CAGGGGGTTTAGTGGAGCTGATGATTTCATGGCATCTTTCGGGAAGGCGG
TTCAATCTTTGAGTGATTTTCCCTCTCGGTGAACACCTGATTTCTAGACA
GCGGTCATNTTAGTGGAGCTGATGATTTCATGGCATCTTTCGGGAAGGCG
GTTCAATCTTTGAGTGATTTTCCCTCTCGGTGAACACCTGATTTCTAGAC
AGCGATCATCTTTGTATACCGACTTGATGAAACCtcctggtctgtaaaat
tgatGGTTATATTTACATCCTCGAGCTGTCTTATGATCTAAGTTTGGAAT
GTCAGGGAAAGTGAATGTGGGTCTGCTTTCAAATCTTTTGACCATTATTG
ACAAGATGGTCAACC

Coding sequence (CDS) from alignment at sc0000051:688620..700384+

>TCONS_00005154 ID=TCONS_00005154|Name=TCONS_00005154|organism=Clytia hemisphaerica|type=CDS|length=2121bp|location=Sequence derived from alignment at sc0000051:688620..700384+ (Clytia hemisphaerica)
atgaagctgtATTTCCACATCCACCTGGGAGGCCATCACAATCACAACAT
TGTGACCGCGGTTCTTCAATCAGATGAAAAACTCGAATTGAAATCTTGTC
TTCAGAAGTTGTGTGCTCGTCTTAATGATCATGCTAAAACTTCACTAAAC
ACCAAATATTTGGAAGTATCCTTGAAGCAAAAAGTTTTGGAGATGGACAC
TGACCTTTCAAGCCTTCAAAATGGTTGTGATTTGAAGGTTGTGGTTCAAA
CCAGTGTGTGCGACACTAGTACGAAATATGAGAAGACTGTCATCAACAAA
GATAAAAGTGCTCCGTtaaaatcaagtaaaaaaaCTGTTTCTCAAAGTAC
CGATGAACATGAGGAGCTATTGAAGAAGGCAGATGAGCTTATATCTAAAA
GCATGAACAATGCAGCATTGGCAATTTATAAAGAGATAATTTCTTCATTA
AGTAGTAGTTATGAAGCTACATTCGGAATTGCTTACATCCTTTTCAAAGC
GAAACGTTTCAAAGAAAGCTTGACTTATTTTGAGAAACTTTTGAACATTG
ACAATTCCAATGATGTTGTTGTGTTGGATTATGCTCGAAGTTTGATTGAA
TGTAAGCATCATAAACAGGCTCTTAACGTTTTATCTCGCTCCATTGAAGA
TCTAAAACGTGCGGGTAAAGTGAAGGCTGTTTGCAACACTAATGTTGTTT
TAGCTGAAGCCTTGGAATCAATGGATGAAATGCAAAAcgcttttcaaatt
tatttgtcAGTATCTCAAATGACAGAGAAGCAAAACGTGGACGCCTTGTT
GGGTTATGCCAGAGTTGGATATCAATTGGGACTCGTTTCACTGGATGACG
TTTTCATTGTGGTTTTGAACGCCATTGCTCTCCGTAAAAATGATGTCAAA
GTTCAGCATTTCTTCGCTAAGATGGTACAACAGAAAAACGGAATGGAATG
TCTGCAACGTCAAATGAATGACGCATGGTCTGACGTCACTGCAGTTGTTT
ATATCGCCACCTTTCTCAGAGAGTGTGGTGCTATCGATGTTTGTTTGAAG
CTGCTCGAGCATGCGCTTAGATTAGCACCAAAAAGTATCGATGTCGCTCT
TTTGACCGCTCATGTCTTTGAAAACAAACGCGATTTGAACGCAGCGTTAA
AGTTTGTGGGGGATTTTATTGACAGTAAACACGATAGACAAGTGTTGAGA
AAGATCGATCTCAGTAAATTTACCACCGTAATCAAGTCATACTTATCAGA
CAGCACAAGCGAGCTGACACCGTTCGAAGTGGAGCCAAAAGAGCCCTCAC
CCACTGGGAGCATGGCAAATGTGGAACTACAATTATTGGCTCTCTACTTC
ACTGTCATCAAAATCCTTTTTGTGGAAGGAAAAGTTGAAATCATCCCCTC
CCTTGTGAAGTTGATGAAGCCATTATTTACCATGCAGAACGATCTGCATA
AAACCTTAATCCGAAACGAGCAAGCTTTCTTCTCATGCATTGATCAACTC
ATTGAAAGTCCCGTCACTTTCAACACGGCGTCACCCAACAAGCTGTACGT
CATTGGAGATAGCCATGTGTTACCTATCGCCTGGCAAACCGTCAAGATCA
AGGAGAAAGATTATATGACCAAACCAATCCTCGTCACTGGACTGAAAATC
TGGCACCTTCGACAAGAATCTCAGTTCTACACCAAGAAGTGTTTTGATAC
ATCCATACAACAAATGGAAAGTGGAACGCCAtgtcttttcatcctcggtg
aAATCGATTGTCGAGAAGGAGTTCGAAAAGTTGTCGAAAAATGTCTTTAC
GATTCTGTGAAAGAAAGCATCGAAGCTTTAGTTGATATTTACGTCAAAAC
AATGTCGAGCGTGAAGAAACGCAATAAATCGAATGTTTACGTCCACCCTG
TGCCGTGTGTGTTGAAGGAAACTTGCGACATCGTTATGCAGTTCAACTCA
ATCTTGAAAGAACGAGTTATGAAAATTGCAAGTTTAACTTGGTTAGATTT
TATGGACCAATTGATTGATGAACGAAGCGGATATTTGAAGGAAGAATATT
CATTTGATGGCGCTCACATCCACCCCAAATATATATCTGTTTTGCAAGAc
acttttgaaaaagtccaataa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_002939	XLOC_002939	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00005154-protein	TCONS_00005154-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00005154-exon-sc0000051-1491911889:688620..688978	TCONS_00005154-exon-sc0000051-1491911889:688620..688978	Clytia hemisphaerica	exon
TCONS_00005154-exon-sc0000051-1510915933:688620..688978	TCONS_00005154-exon-sc0000051-1510915933:688620..688978	Clytia hemisphaerica	exon
TCONS_00005154-exon-sc0000051-1575043694:688620..688978	TCONS_00005154-exon-sc0000051-1575043694:688620..688978	Clytia hemisphaerica	exon
TCONS_00005154-exon-sc0000051-1491911889:695025..700384	TCONS_00005154-exon-sc0000051-1491911889:695025..700384	Clytia hemisphaerica	exon
TCONS_00005154-exon-sc0000051-1510915933:695025..700384	TCONS_00005154-exon-sc0000051-1510915933:695025..700384	Clytia hemisphaerica	exon
TCONS_00005154-exon-sc0000051-1575043694:695025..700384	TCONS_00005154-exon-sc0000051-1575043694:695025..700384	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000051	supercontig	sc0000051:688620..700384 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.11253	5.02513	2.48257	2.29974	7.92333	5.45352	6.74811	7.91417	4.77852	5.77637	3.91965	5.40959	5.26737	3.2433	4.87845	5.52011	4.41458	4.04941	2.75452	3.53841	4.46758	3.83169	5.9607	5.78276	5.68282	6.07835	3.54135	3.48133	3.40644	4.86739

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat
IPR013830	SGNH_hydro

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00005154 vs. Swiss-Prot (Human)

BLAST of TCONS_00005154 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00005154 (transcript) - C. hemisphaerica