TCONS_00005127 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005127
Unique NameTCONS_00005127
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2749

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005127 ID=TCONS_00005127|Name=TCONS_00005127|organism=Clytia hemisphaerica|type=transcript|length=2749bp
TTTACACTTgtttctttagatttttctcaaaaaaacgtCAAACACAGTAA
AATTAAAAGGATAAAGAAAAGATGACAGAACCTATTTTCAAGGAGATTTC
TGcagaagaaagtgaaagtggaaTCACTGAACTGGAAAGTTTGTGTATGG
AATGTCATGAAAATGGCACTACACGTCTGTTACTTACGAGGATtccattc
ttcaaagaagtcatTCTTTCATCTTTTGAATGTGAGCATTGTggattaaa
aaataatgaaatcaaATCAGCTTCGGAAATACAGAAGAAGGGTGTCAAGT
ATAAACTCAAAATCAATGGCTCAAAGGATTTATCGAGACAGGTGGTTCGG
CAAAGTTCAGCCATGTTCCGTATTGACGAAATTgatttcgaagctcctgc
ttTCACATCAAAAGGAGCTTTGACAACGATAGAAGGGATGTTACAGACGG
CCATTGATGGGTTAGAACAACAACAACCTGTACGAAAGATCATGGAACCG
GTGTTAGCTGAAAAGATAAGTGAAATTATTTCAATCCTGGATAAATACAA
GAGTGGTGACATCCCTTTTACGTTGATACTTGAAGATATCTCTGGCAACT
CCTTCATTGAAAACCCTCGCGCACCTGAACAAGATCCCGCTATGATGGTC
ACGCAGTTCGTACGCACGAGCGAACAATCGGAACAACTTGGACTAACGGA
AGAAATGGAGAAACAAGAAGAAGaaagGACGGAAAAAGAATTAGCGCCTG
AAGAGGTGTACGAGTTTCCAGGGAATTGCCACAGCTGTGGAACACCAGTC
GTCACCAAGATGAAAATGTTACAAATCCCACATTTTAAAGAAGTTGTCAT
CATGTCATCGAACTGTGAAGCTTGTGGAGAAAAATCAAACGAAATCAAAG
CGGGAGGTGGGATAGAGGATCAAGGAACGAAAATATCTTTAACACTGACC
GACCCAACTGACTTATCTCGTGATGTTTTGACGtCGGAGACATGTATAGT
ATCGATTCCTGAGCTAGATATGGAATTATCACATTCAAGCGACGCCGGAA
GGTTCACAACCATCGAAGGCTTGCTCAATAATATCAAAACTGGCGTCGGC
CGTATCAACCCGTTCGCGTTCGGTGACAGTGCGGGCGataaagagaaaac
aaaagtcACAAAGATCACTGATCAAATAcaagagaTAATTGATGGGAAAT
TATTCGTGACGCTTGTTTTTGATGACCCTGTTGGAAATTCACATGTTCAG
AATTTGTACGCACCTGATCCAGACCCTAACCTCACCGTAGAAAAGTATGA
CCGAACTGCGGAACAAGAGCTGGACCTCGGAATCGCGGatatgaaaattt
acaaatataCAGATGAAGACGAAGATGAATGACACAAAATGTATGcctga
attattttttgttgctttttttgatacgaaagaactttattttcaaaatt
atatatAACATGATACGGTGTAACTTATTGTGTTCCACAGCTTACAACCT
CCTTTGCATTTAttggtattttatgaaaaatatcCCCTCTTTCGTTTTGA
GACAATTAATTCACACGTTTGATCCAATCCGAAAAACATGTCTGTAAACT
TTAGAATTGATAGCCTTAGTACAAGAGAACATAACTACTTTCGAATTTCA
GCACTACTATCTCGCTACATCTCAGCTCTTGTAAACTGCCAAATTTTGTT
CGAATTGTCACGAAATGGTTAGACCAATCAAATTGATTTGTTCACAATTA
TTGACTTTTTGTATTTTCCTTACAACCTTGGTTTCATCAACTTCATCTGT
ACTTTTGTTATCTTTGTAAAGATCTGCTTCACTCACAGAACGTCTCACTG
CTTGGAGGTCTGACCATTTGGCACTGGCCGATCGTCTTAAGTGAATTCTC
GGACTGTCTCTCTGTTCTCCGTTTGTTTTCTTAATGCGGAACAGCCCAAT
GGGACCGGAACCACGTCTCGTTTTACGGAAAGATGGAatctttttcgtct
tttttgtATCGTCTGCAATATTCCCATGGTGATTAGTGACGTCATGTTGG
CCTCGTTTTGAATTTGCTCTCCTTCGTagtggattttttttattttttcg
aacgCGACCCAATGTCATGATTTGGTTTGCGCCAGAGTTTAAAGACATTG
CCATTTCCACCAATATTTTGGTTGGCGAATCAGTTGCTAGGTCTGATGGT
GTATCTCCATTCTGATTGGTAGCAAAGACATTCACACATGCGTTTAAAAG
TAAACGAACTAATTGGAAGTGATTATTCATGCATGCAAAGTGAAGACCTG
TGTTTCCTTCACTATCTTCAAGTTCAATAGATGCACCATGGTCAACTAAC
AATCGCACAACACTCAATGACCCCTTCTGACAGAAACGGTGAAGCAAGGT
CGTTCCGTCCTTAGGACTTTTCTTGTCAATGTCGATCTTGGCTTTGTGGT
AATACAAGAACACTTTAGCTTGTGTGACATCTTCCTCTTCTAAGGCTCGT
TCAAATTGTTGGTATATCGACGGCATCTTCCTTTATTGTATGTTCAGCTA
GTAAAAGTTATGAGAGTGCCATTTATCTCTTTCGGTAGAGGTTTTTGATT
AATATTTTGTCACCTTCTTTTAGCTTTCACCAGCTTGTTTTCCGATAGAA
ATGTAATGCTTTTCAACAGTCAAAACCACTGCAAATATCCAATCTATCAC
TTCGATTGGACTATCTAATCTACTTCTGTAAGATGTCAAACGTTTGACG
Run BLAST on NCBI

transcript from alignment at sc0000051:211811..225311+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005127 ID=TCONS_00005127|Name=TCONS_00005127|organism=Clytia hemisphaerica|type=transcript|length=13501bp|location=Sequence derived from alignment at sc0000051:211811..225311+ (Clytia hemisphaerica)
TTTACACTTgtttctttagatttttctcaaaaaaacgtCAAACACAGTAA
AATTAAAAGGATAAAGAAAAGATGACAGAACCTATTTTCAAGGAGATTTC
TGcagaagaaagtgaaagtggaaTCACTGAACTGGAAAGTTTGTGTATGG
AATGTCATGAAAATGTAAGAAGTCTTGCTACTTCAGTACTTTCAAACTTT
CTCACAATTAAGATTTAAACTTGAGTATTCTCAAATTTAATCAGGTTTCA
TGAAATGAAAAGTAACGAATTTAAACCAAGATTATAGACAGAACTTTAAA
GTTTAGTTTTTCGACatctaggctgctggcatccactaacggattcgtga
gGTTTTGTAAAGGTCTACCATTCAGACTTATCTCCTCCTGACTTTGTTAA
CGAAGGAAATTCTTTGATCTAAATTTGAAGTTTCTCAACAAAGAATGCAT
TTTCATTTCCAGGGCACTACACGTCTGTTACTTACGAGGATtccattctt
caaagaagtcatTCTTTCATCTTTTGAATGTGAGCATTGTggattaaaaa
ataatgaaatcaaATCAGCTTCGGAAATACAGAAGAAGGGTGTCAAGTAT
AAACTCAAAATCAATGGCTCAAAGGTACCCAGCCTCTCTGGTCTAAACTG
TTATTGTTAGTGAgatctttttaaaaagaatttaataGTTTTCTACGAAG
TTTAAGAAGgtcgtaaaatttcttttttctcttttttggttCTTATTGTT
GTTCCCTGAATCTTAATATGAAGTATACATTGTATATTGATTTTAATTGA
TGTGTTTATTTAGAATATTCCTAATTCCTGGGTTAtgtaatttgaattta
aatgaatctttcaactttttggacctaccttagaggtcctataaattaac
cgatgaccgtccgttcgtccgcctgttaccagcttttctcaggattggct
cattagttttttcaggcCAGTATCACAACCCGATTCTACAATATATGTAG
TTCTGTAAATTCTAGAATCTACAAAATGTGTAGATTCTGTATTATCAGAA
ACTACATAATATGTATATCTTAGAAGATTCTAAtagtgacgtaatgtttt
aaaaCAGGCCAAAATCACTCCAGAATCTACCAAATAAGTAGAAGTGTCAA
CGATTTTAATTATGTGCGTGCTCGGGTTAAATTcaagctccaaccctgac
cctaactgtcTATATAGTGCGTGCTCGAATTAGTTTCgggctccaaccct
gaccctaactgtcTAGATAGTCATTTCCCCAGGATTACGCCATCCACAAC
CCCAACCAAAAAGTGACTGAACCGCCCTTAGCGATTCATCCTTTATATAC
TAAGAACGCTAAATAACTCATTGTGGTTTATACAATATAGACCTATATGT
GGAGCAATACTCCATCTTTTCCGGTTCTACAAAATACGTAGAAATTCTAG
AAACTACAGAATATGTAGATTCTGTGCTATCAGAAACNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTA
TATTTCATACTAACTgtcaaagggtggtggtgtggcctctttcctccaaa
gaatcacttagtaggcatgatgtcttgtactaactgcttgacccccccct
gcaTATATTGTAGATTTCAACCAATTGACAGAACTACATATATTGTAGAA
CCGGGTGTGATGATGTGTtggttttttctaattttcggcacaatgatgca
aaatggcaatgcccaatatgtgacggagtccgattttcaaaaaaatattt
ttccggccgaaaatgccggaaatatgcttttgcaattttgcaaccggaac
tttctatttcttttttccctaaacacctccccccatcaacaatcaatgat
gaaatttaatgcattttcgctaagcgctatattttcttaatgattctttt
tctccttattgctatttaagtttcatcatcaggtaggtccattcagcatg
ttgcttgtttcttaTAGGATTTATCGAGACAGGTGGTTCGGCAAAGTTCA
GCCATGTTCCGTATTGACGAAATTgatttcgaagctcctgcttTCACATC
AAAAGGAGGTATGGTGGAAGAATCTATTTCTGTGATTTCATTGCAGTCTG
TTTNCACATCAAAAGGAGGTATGATAGAAGAATctatttttctgtgattt
caTTGCAGTCTGTTTTGTTACATGAAATAAACCAGCAACATGGCTTATAA
GCAGGTCCTAGGCCCCCCTAAgaatttaggtgccccctaggaTTTAGGTG
GCCCctattggaaaaatattctaggtggcccctaaaagttcaaaaatcga
aaaaagctaaaaattgaaatcgtAGATATACTTCtagaaaaactttcttt
tttgtcaagTGTAATTAAATACAACAGTTTTAAAAATAGCTACTTAAagg
caaacaaaagaaaattcaggTTAGGGTAAGGGTTAGGTTAGTTCATTATg
taaaaaattaggtcccccctagcTCAGTAGGTGGCCCCTGGCCAAAGACT
ATTTGTAGGTACCAGTTGCCCTGAGACCTTTTAACCCCCCCTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNggggggggggggggggggtgaagccATGTAGCGACGAT
CTAACTCATCTTAGAATTCTTTATACCTTAACGAGGATTTTAACTAcacg
gtttttttataagaacattcaattttttttgaagtcttcggatgttctaA
CTTTTTGGGTTTAGCCTAAAAAaggtcttaaaatgttcttaatctcactt
aatttttgaccatttttacctaTTTTCCTACAGCTTTGACAACGATAGAA
GGGATGTTACAGACGGCCATTGATGGGTTAGAACAACAACAACCTGTACG
AAAGGTAAATACGGAGTTGCTTTTATGCGTTCAGTTAGCATGTTGAATCT
TTTCTCTGAATAGGGATATTAGCAACGTTTTCTACATGTTTGGTCTGCTG
GAAACAAAGTATCAGATACTGGTGTTATATATTCTTCTAAGCAGAAAAGG
GGGTGATTTCAACTGTCTACTACCTATATCAAGTTTGcagcagtagcgtg
gtgggtccaCAAAATTCAGGCAAACTGGGGAGACAAATTTCTAATATTAT
GATTCTAGCGGCCCTCTGAAATATAAATATCTTTGTAAAGATTACGCGAG
CGAAACGAGCacgaaaattttggggtaatttctctctttttggctgaaaa
ctgccatatctaaggtgtaaaagaNACAtggggtattttctctctttttg
gctgaaaactgccatatctaaggtgtaaaagagcaaaggAGCGCCGTaat
tagtaatcagaggcgTCTTTTTGCGCCCTTTGTATTTTGGCGCCCCAAAA
AGAATTGGCTGCTGGGGGGCACTGCCCCTCGGGGCACTGCCCCTCTGCCC
CTCTGCCCCCTGTCATCACGCTACTGGTTTGCAGGCGTTTGAATGGTGCA
CAACTATAAGGAGCTTTGCATAACCATcaagcaaataaaagaaatgaaat
aaacTACAGTTTAAAAGATAACCAATTCGTTCCGCAAAAACGAAATAGCT
GTTATTTTCTTGATAGTGATGTATACAATGCCATGTTTTGGTCTATTAAG
AATATCTGATCGTAGTACAGAATCGTATGTCCTGGATGTGTAATATTATT
CTACTGATTTCTTCTCCCGTAGATCATGGAACCGGTGTTAGCTGAAAAGA
TAAGTGAAATTATTTCAATCCTGGATAAATACAAGAGTGGTGACATCCCT
TTTACGTTGATACTTGAAGATATCTCTGGCAACTCCTTCATTGAAAACCC
TCGCGCACCTGAACAAGATCCCGCTATGATGGTCACGCAGTTCGTACGCA
CGAGCGAACAATCGGAACAACTTGGACTAACGGAAGAAATGGAGAAACAA
GAAGAAGGTACGTGAGCTATGACACTTtgattttttacgtttttctggCC
CCTGTGTTTTTGTCGAACAGTGAACTAATGATTCTCTTGAAGTTGACAAG
AActtagaaatagaaaataaatagTTGgcttaacttttttattttttact
ttttagaaagGACGGAAAAAGAATTAGCGCCTGAAGAGGTCAGTAGAAAA
AACAGCAACTAACACATGCCGCgataccttgaaactttttggtgATTGAC
CGGATAACAGCTTTACTACTTGTTCAATTAACCTAATTTTTTCAACCGGT
TTGCTACATGAATTTAGGTTTAGCACAAAAATGCTAAGCTAATCATACTC
CTATATACCATTCACTCGAAATGTGACGATCATTAAAAATAGTGGTTGAA
ATCCTTTTCAAATTTAGtctttttaaattaaatctCAACATAATTAACTG
ATAAATACATCCTTTGAATGTAAAGAGCTTCTTCTTGTGTTGAGTTTCAA
TTTTACTAGAACCTTCTTTTATTGGCCAATTTTGACAGGTGTACGAGTTT
CCAGGGAATTGCCACAGCTGTGGAACACCAGTCGTCACCAAGATGAAAAT
GTTACGTATCTTTTTCAAACTGATCCTTGTTTGGTAAAAGTATAAAATAA
GATTTCTCTATGGTAGCCAGGTACACATGGATGGGATGCATTTCTCTTGG
TTTATGCAGAGTTGTACGGTGGCCCATATATGCAAAGATATTAAAATATA
CAAACacaaacaaaaattacaaacactaacaacttaaatgcaaacacttt
caactaaatTACAAACACTATCAACTTaaatgcaaacactttcaactaaa
ttgcaaacactttcaactcaaattacaaacactaacaacttaaaatgcaa
acacttttaactaaaattgcaaacacttttaactaaaattgcaaacactt
tcaactaaaatgcaaacactttTAACTCAAATTGCAAACACTAACAACTT
AAATGCAAACACTAACAACTTAAAAGCAAACATTAACAACTTGAAATTAC
AAACACTAACAACTAAAATGCAAACAATAATAACTTAAAATGCAAACACT
AACGAATTATAAATTGCAAACACAaacgaaaactttgaaaaatatgataC
AGGACACAGGGTACAGGCTGACAGGCCTTCTCCTTGTATATCGCATGTAA
TAATGACTTGCGGTTTTAGTCTACGCATGCGCATTATATGGGCTCTTCGT
GGAACTTACACCGTATGACAAGGCAGGCCGGACagaccaaggatttatta
tacactggatatacaagtaacagatttttgctgattttcgtgtactagct
atgtccgcagtaatggtattattgttcactctccttccctcattaaatga
attttcgaagcatttttattgcatttcttatcgaaaatcactcatccaat
tcccaaaagagacttaaaactttcctgtgagagtcagattcttccactta
attaataattataagtcgttatgacgtttcaaactatgagaaagatgcaa
aagacgtgttgtgtataagaaatttaatgttgacaccggaaactttcaaa
cttcaacctcaaaaaaaccaccttgccaccacgtgcctccaaaggatttt
cataccacagtggagccaagacactcaagtcttatgtatgttaatttcag
ctcttctcggaacagtcttggaaagatatttccaattgaaaattttgtgt
cactataagcattttggcTGGGTTTCTTGTCTAATTTTTataaatcagac
atcttcgagccgccatgacagttgtcctttgcggacaaagctagaacatc
aattgttttctgaaacaaaggaaatacaatgatcgctctccatcgtttta
tgagtcgtttatccagtgtataataaatctttggacAGACCATATAAACT
TTCGATAATTGAATTGCGGATTAAAGGGGAACACTGTCTTGCGCTGTACC
AATTCTGAAAatagtccagaccgacttaaggcAAAATTAATCGGGTGCTG
TGTCTTCAATTTtggtgctacgtcttagatattttgcaggcttgttctcc
acttggtagagatgcctcaaGGCCagtttgaccggctgaaaacgccgtac
ggcctgGCAATCGTTATTACGGGGACTTCCTGCAGCGCacctttcgcggc
ccgtagcccggcgaccaGTGACGGTGGAacaatgaaatttggcatgcttt
cccCTTTCGATGTgctcgacgtctccagaaagtttcaagtcgtgatatcc
acccagtccggcgctagtgGAGGGGGTCATTTACGGTCCCTTAGCGCCCT
tccgtcaacttttcaggacttcggacctattttttcggaatttacaccca
aaaaaacatcaaaacctgAATAAAACATTTAAGTGTGACCCTGACCCGAT
TCGAACTGGGGATCCCTAGTACGTGAACCCAACGCGTTATACCGCTGGGC
GAACTGGGCCAACATCCAGCCGGGCGCTAGTGTAATTTCTGAGGGATGTC
ATTCCTTCGCTAGCTTGACTTGGCCCAGAGCTCAatagggacccctcaaa
gtattttttaagacttggctgaaggtgtacgtcagCACCAAGTGGTTCAC
GAGTTGTAGAAACGTCTCACTGCTTTCCATcccaccgggggggggggctc
caagctggtctAGTACGAGTTCTGACCCCCCCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCCCTACcctttagctttcc
aaaaatgtataacaagtgcttctaacaaaacagtcaagcgattccaaaaa
atcgaacaaaattccccctactaaaacctggtcaaaaatttccaaataga
CCTGAACCGGATCGGATTCGATCAGGGGATCCACAGTGCCTGAACTTTGG
ACCACTAGGCTAActgcttgggaaattttctcaGGGGTGCGAGGGCTTGT
TAGTGAGCTCTAACGaccccttagagcattcttgagACTTGGATAAAGGT
GCAAAAGTAAAACACCACCACTCAAAAGCATAGTATagcattactggaag
aaaaacctccacCACCGCTCCTCGTCAccggagttcccaggcggtccccc
atctaAGCTAACTTCCGTGATCTGACGAGAACGGGTGCTTCCATCCTGAT
ATGAACGTGGAGCgtgcctggagtgctttttctggctatttataccgact
aagcagtcaggcaaagttcccCGGTCAGTTTCCTCGAACTGTACAATCTG
tacaataacaataaaaataataataacaataatttaAGTTGATAGTGTTT
GCATTTTAAGTTGTTGGGGTTTGCAATTTAAAGTTGTTAGTGTTTGCAAT
TTaagttgaaagtgtttgcaattttagttaaaagtgtttgcattttagtt
aaaagtgtttgcattttaaGTTGTTAGTGTTTGCAATTTGAGTTGTTAGT
GTTTGTAATTTAGTTGATAGTGTTTGTAatttagttgaaagtgtttgcat
tttagttaaaagtgtttgcattttaagttgttagtgtttgcaatttgagt
tgttagtgtttgcaatttgagttgaaagtgtttgcattttagttgaaagt
gtttgcattttagttaaaagtgtttgcattttaagttgttagtgtttgta
atttaagttgttagtgtttgcaatttgagttgaaagtgtttgcattttag
ttaaaagtgtttgcattttagttaaaagtgtttgcattttaaGTTGTTAG
TGTTTGTAATTTAAGATGTTAGTGTTTGCAATTTGAGTTCAAAGTGTTCG
CAatttagttgaaagtgtttgcaatttagttgaaagtgtttgcaatttag
ttaaaagtgtttgcattttagttgttagtgtttgcattttagttgATAGT
GTTTGTAatttagttgaaagtgtttgcatttaagttgttagtgtttgcat
tttagttgATAGTGTTTGTAatttagttgaaagtgtttgcatttaagttg
ttagtgtttgcattttagttgATAGTGTTTGTAATTTAGTATAATATGTT
TGCATATACGGGCCACCGTAGAGTTGCGATACGAAGGGACTTGAATGTGG
GCGCTAGGTTCTGAGTAATCTGTAGCCGAAAAACCATAAGAAGCGCAGAA
TAGGAGAAGGATAGAGAATAGGAGATTTGTTTTTTAATGTTGACGAAAAA
TCCAGACATCAGTAATAAAGGAAAGGTACATAGCAATGTTGATAGTTTCG
CTGTGGTAGCTGAACAAGGTGTACCGGTCTTAGTATTGAATTCAATTTCA
TCTTCTGACTATCTTATGTCTCGTTCCTCTCAAAACAACCAAATTCGTCA
TGACCAGACAATATGCCAGGAGGGTTTCGTACTTCGACTCATTGTACGAC
ATTTTTGCTAGTATCAATAACTTTGAAACTTCTTCCTTAACCTAAACACA
AACGATAGAAATCCCACATTTTAAAGAAGTTGTCATCATGTCATCGAACT
GTGAAGCTTGTGGAGAAAAATCAAACGAAATCAAAGCGGGAGGTTTGTCg
agttttgtttacattttcgaaTAACATGCTTTATCTTTAGTACATAATTT
GTTGTTGCCCGAATAAGTACTCGTACTTTCGTACTCTCGTAAACTTTTAC
GagatttactttcgcgaattgacgaaaaaatattttagggaGCATAAACT
TTTACGAAGGATGACATAAAAATGAAgcttttcacatgaaaaaatagctc
aaatacttcttgggttggttttaaaactattttttgttgACAAATTAGGC
TTTTGACAGGCTTAAAAGTACCATAAATGTTATTTTTTATGCAAAGTTTG
aagtttcaaagattttctattttttcaagaatttttcgcaagcataaact
ttccCGATTCCAAgacatttattttcgcgaaaaggTCATATGAAATTGTA
GACGTATTCATTTTTCTGTTCATGTTTATTTCAGGTGGGATAGAGGATCA
AGGAACGAAAATATCTTTAACACTGACCGACCCAACTGACTTATCTCGTG
ATGTTTTGACGGTAAAACTCTTTACTTTTCCAAGATTGTGGTATGCACCT
TTACTCCTTCACgcttttctataagaacacgaggctgaattTGACTTAAG
CCTAGGAACACACGAGAAGAGTTTCATCCTCAGATTTCAGAAGTTACCAA
GAAAGATGATTAGACTAAAGCCCTTTTTATAGTCCTTGAATAAAGAAGCC
AAGCGAAAGTGCGTCAAATGAGACAAAGTCAAAATGTATCGGACTTTATA
GAAAAAGAAGtctctagaaaaaaatcattatttccTTAATCTTTACTCGA
CAAGtctcttttttctctttcagtCGGAGACATGTATAGTATCGATTCCT
GAGCTAGATATGGAATTATCACATTCAAGCGACGCCGGAAGGTTCACAAC
CATCGAAGGCTTGCTCAATAATATCAAAACTGGCGTAAGAATTTTCCACT
AAGCTTTTTGGATCTATTTGGtggcctttggatgttcttaacgttTTGAG
TTAAAAGCTTAAAAGTAGTCTGATAATGTacttttcaccattttatgatT
ATCTTTGtgtaatttcctaagaaatcgggtattTAGAGTcagcgaagcct
taaaatgttcttaacttgttcttaatattttggccatcgaaaccttatgt
tctgataaagtttgttcttatatgtagcttctttttattttcaccactgA
GATTTTCATCTCTTTGTCATCTCTTCTTTTTGACAGTGATTTTTTCATAA
ACTGAAAAACGCTCTTCAAAACAACTTCAAAACAACTCCAATGTTTTGCA
TAATTTCGAACAAATTTTAACCTGTTTGTGTTTGCACGTGTGATtacaat
taatttacattccaATCTGCCACAGGTCGGCCGTATCAACCCGTTCGCGT
TCGGTGACAGTGCGGGCGataaagagaaaacaaaagtcACAAAGATCACT
GATCAAATAcaagaggtttgtttttatgaGGGGACCATTtccagttttga
tttttaagtaTCACGCAAAATAAGCTCCAGTGTAGTTTCCAAAATCTTTC
GATTTTcaattaaggtcataatatttcaGAAGAAAGGGAAATCCTCACGA
AATCTTATAGCTACAAAAGATTTGGAAGCTAACTTAGTTGGaaagagttt
taacgctagactttagacttaacccctcccaaattgaaatattcgattat
aTTTAACAGATAGCCAAAatgcgactttctcgcccgaacttcaaATTTAT
TCAAACGAGGAagtagccaaaattctcaatatatttccaCGCAGAATGTA
CATTGCTCGTGGTTTATTTTGagatctttttaaaatttcggtgtcgtttt
cttttcgattaatcttacaaaaacttttttgctgGAGGAAAGCTTAGatc
atatttttgttattttcagaTAATTGATGGGAAATTATTCGTGACGCTTG
TTTTTGATGACCCTGTTGGAAATTCACATGTTCAGGTAGAACAATACTCC
TCGAACAGTCAAGTAGTCAAATACAAGAAAGGATACAAAACCTTTAGGGC
ATAGTATCCTTGAAGGTCTTGACCCCTCGTTTTTCCCAATCCTGACTCCT
GTCTAACCGAAAAACTAAAACCTTTACATTTACAAAGatccatttgaaaa
aatattcatcTTAGGTTTAGTTAtcaaaaaaacactatttttacCTTGAC
AGAATTTGTACGCACCTGATCCAGACCCTAACCTCACCGTAGAAAAGTAT
GACCGAACTGCGGAACAAGAGCTGGACCTCGGAATCGCGGatatgaaaat
ttacaaatataCAGATGAAGACGAAGATGAATGACACAAAATGTATGcct
gaattattttttgttgctttttttgatacgaaagaactttattttcaaaa
ttatatatAACATGATACGGTGTAACTTATTGTGTTCCACAGCTTACAAC
CTCCTTTGCATTTAttggtattttatgaaaaatatcCCCTCTTTCGTTTT
GAGACAATTAATTCACACGTTTGATCCAATCCGAAAAACATGTCTGTAAA
CTTTAGAATTGATAGCCTTAGTACAAGAGAACATAACTACTTTCGAATTT
CAGCACTACTATCTCGCTACATCTCAGCTCTTGTAAACTGCCAAATTTTG
TTCGAATTGTCACGAAATGGTTAGACCAATCAAATTGATTTGTTCACAAT
TATTGACTTTTTGTATTTTCCTTACAACCTTGGTTTCATCAACTTCATCT
GTACTTTTGTTATCTTTGTAAAGATCTGCTTCACTCACAGAACGTCTCAC
TGCTTGGAGGTCTGACCATTTGGCACTGGCCGATCGTCTTAAGTGAATTC
TCGGACTGTCTCTCTGTTCTCCGTTTGTTTTCTTAATGCGGAACAGCCCA
ATGGGACCGGAACCACGTCTCGTTTTACGGAAAGATGGAatctttttcgt
cttttttgtATCGTCTGCAATATTCCCATGGTGATTAGTGACGTCATGTT
GGCCTCGTTTTGAATTTGCTCTCCTTCGTagtggattttttttatttttt
cgaacgCGACCCAATGTCATGATTTGGTTTGCGCCAGAGTTTAAAGACAT
TGCCATTTCCACCAATATTTTGGTTGGCGAATCAGTTGCTAGGTCTGATG
GTGTATCTCCATTCTGATTGGTAGCAAAGACATTCACACATGCGTTTAAA
AGTAAACGAACTAATTGGAAGTGATTATTCATGCATGCAAAGTGAAGACC
TGTGTTTCCTTCACTATCTTCAAGTTCAATAGATGCACCATGGTCAACTA
ACAATCGCACAACACTCAATGACCCCTTCTGACAGAAACGGTGAAGCAAG
GTCGTTCCGTCCTTAGGACTTTTCTTGTCAATGTCGATCTTGGCTTTGTG
GTAATACAAGAACACTTTAGCTTGTGTGACATCTTCCTCTTCTAAGGCTC
GTTCAAATTGTTGGTATATCGACGGCATCTTCCTTTATTGTATGTTCAGC
TAGTAAAAGTTATGAGAGTGCCATTTATCTCTTTCGGTAGAGGTTTTTGA
TTAATATTTTGTCACCTTCTTTTAGCTTTCACCAGCTTGTTTTCCGATAG
AAATGTAATGCTTTTCAACAGTCAAAACCACTGCAAATATCCAATCTATC
ACTTCGATTGGACTATCTAATCTACTTCTGTAAGATGTCAAACGTTTGAC
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002921XLOC_002921Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005127-exon-sc0000051-1491911889:211811..211974TCONS_00005127-exon-sc0000051-1491911889:211811..211974Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:211811..211974TCONS_00005127-exon-sc0000051-1510915933:211811..211974Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:211811..211974TCONS_00005127-exon-sc0000051-1575043694:211811..211974Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:212273..212434TCONS_00005127-exon-sc0000051-1491911889:212273..212434Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:212273..212434TCONS_00005127-exon-sc0000051-1510915933:212273..212434Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:212273..212434TCONS_00005127-exon-sc0000051-1575043694:212273..212434Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:214328..214418TCONS_00005127-exon-sc0000051-1491911889:214328..214418Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:214328..214418TCONS_00005127-exon-sc0000051-1510915933:214328..214418Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:214328..214418TCONS_00005127-exon-sc0000051-1575043694:214328..214418Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:215244..215314TCONS_00005127-exon-sc0000051-1491911889:215244..215314Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:215244..215314TCONS_00005127-exon-sc0000051-1510915933:215244..215314Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:215244..215314TCONS_00005127-exon-sc0000051-1575043694:215244..215314Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:216133..216367TCONS_00005127-exon-sc0000051-1491911889:216133..216367Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:216133..216367TCONS_00005127-exon-sc0000051-1510915933:216133..216367Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:216133..216367TCONS_00005127-exon-sc0000051-1575043694:216133..216367Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:216517..216548TCONS_00005127-exon-sc0000051-1491911889:216517..216548Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:216517..216548TCONS_00005127-exon-sc0000051-1510915933:216517..216548Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:216517..216548TCONS_00005127-exon-sc0000051-1575043694:216517..216548Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:216899..216965TCONS_00005127-exon-sc0000051-1491911889:216899..216965Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:216899..216965TCONS_00005127-exon-sc0000051-1510915933:216899..216965Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:216899..216965TCONS_00005127-exon-sc0000051-1575043694:216899..216965Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:221519..221602TCONS_00005127-exon-sc0000051-1491911889:221519..221602Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:221519..221602TCONS_00005127-exon-sc0000051-1510915933:221519..221602Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:221519..221602TCONS_00005127-exon-sc0000051-1575043694:221519..221602Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:222045..222121TCONS_00005127-exon-sc0000051-1491911889:222045..222121Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:222045..222121TCONS_00005127-exon-sc0000051-1510915933:222045..222121Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:222045..222121TCONS_00005127-exon-sc0000051-1575043694:222045..222121Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:222434..222544TCONS_00005127-exon-sc0000051-1491911889:222434..222544Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:222434..222544TCONS_00005127-exon-sc0000051-1510915933:222434..222544Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:222434..222544TCONS_00005127-exon-sc0000051-1575043694:222434..222544Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:222986..223075TCONS_00005127-exon-sc0000051-1491911889:222986..223075Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:222986..223075TCONS_00005127-exon-sc0000051-1510915933:222986..223075Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:222986..223075TCONS_00005127-exon-sc0000051-1575043694:222986..223075Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:223530..223595TCONS_00005127-exon-sc0000051-1491911889:223530..223595Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:223530..223595TCONS_00005127-exon-sc0000051-1510915933:223530..223595Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:223530..223595TCONS_00005127-exon-sc0000051-1575043694:223530..223595Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1491911889:223813..225311TCONS_00005127-exon-sc0000051-1491911889:223813..225311Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1510915933:223813..225311TCONS_00005127-exon-sc0000051-1510915933:223813..225311Clytia hemisphaericaexon
TCONS_00005127-exon-sc0000051-1575043694:223813..225311TCONS_00005127-exon-sc0000051-1575043694:223813..225311Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:211811..225311 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.14628	1.20657	0.513347	0.913393	0.977257	0.468756	1.73496	1.81387	3.0602	2.64497	3.20734	3.69869	12.3311	12.1072	6.17978	5.53306	2.65858	3.46515	4.62499	7.06651	3.7812	3.52709	1.33731	2.9539	6.62452	6.95889	0.793009	0.797251	0.918376	0.425789
Blast
[Close]
BLAST of TCONS_00005127 vs. Swiss-Prot (Human)
Match: ZPR1 (Zinc finger protein ZPR1 OS=Homo sapiens GN=ZPR1 PE=1 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 1.045e-143
Identity = 211/425 (49.65%), Postives = 297/425 (69.88%), Query Frame = 3 
Query:   84 IFKEISAEESESGITELESLCMECHENGTTRLLLTRIPFFKEVILSSFECEHCGLKNNEIKSASEIQKKGVKYKLKINGSKDLSRQVVRQSSAMFRIDEIDFEAPAFTSKGALTTIEGMLQTAIDGLEQQQPVRKIMEPVLAEKISEIISILDKYKSGDIPFTLILEDISGNSFIENPRAPEQDPAMMVTQFVRTSEQSEQLGLXXXXXXXXXXXXXXXLAPEEVYEFPGNCHSCGTPVVTKMKMLQIPHFKEVVIMSSNCEACGEKSNEIKAGGGIEDQGTKISLTLTDPTDLSRDVLTSETCIVSIPELDMELSHSSDAGRFTTIEGLLNNIKTGVGRINPFAFGDSAGDKEKTKVTKITDQIQEIIDGKLFVTLVFDDPVGNSHVQNLYAPDPDPNLTVEKYDRTAEQELDLGIADMKIYKY 1358
            +F+ ISAE+ E   TE+ESLCM C+ NG TRLLLT+IPFF+E+I+SSF CEHCG  N EI+SA  IQ +GV+Y L +   +D++R+VV+  SA  RI E+DFE PAF+ KGALTT+EG++  AI GLEQ QP R+  +   AE+I E I  L + K    PFTLI++D SGNSF+ENP AP++D A+++T + RT +Q E LGL EE   ++ E  +      EV +F  NC  C  P  T MK++QIPHFKEV+IM++NCE CG ++NE+K+GG +E  GT+I+L +TD +D++RD+L SETC V IPEL+ EL  +   G+FTT+EGLL +I+  V + NPF  GDS+   +  ++ + + ++ +II+G +    + DDP GNS++QN+YAP+ DP + VE+Y RT +Q  +LG+ DMK   Y
Sbjct:   31 LFRPISAEDEEQQPTEIESLCMNCYCNGMTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYTLSVRALEDMNREVVKTDSAATRIPELDFEIPAFSQKGALTTVEGLITRAISGLEQDQPARRANKDATAERIDEFIVKLKELKQVASPFTLIIDDPSGNSFVENPHAPQKDDALVITHYNRTRQQEEMLGLQEEAPAEKPEEEDLR---NEVLQFSTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRTNEVKSGGAVEPLGTRITLHITDASDMTRDLLKSETCSVEIPELEFELGMAVLGGKFTTLEGLLKDIRELVTK-NPFTLGDSSNPGQTERLQEFSQKMDQIIEGNMKAHFIMDDPAGNSYLQNVYAPEDDPEMKVERYKRTFDQNEELGLNDMKTEGY 451
The following BLAST results are available for this feature:
BLAST of TCONS_00005127 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZPR11.045e-14349.65Zinc finger protein ZPR1 OS=Homo sapiens GN=ZPR1 P... [more]
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