TCONS_00005031 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005031
Unique NameTCONS_00005031
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length525

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005031 ID=TCONS_00005031|Name=TCONS_00005031|organism=Clytia hemisphaerica|type=transcript|length=525bp
GGATGTTGCGTCCTTTATCAAAACTTTAGTGTTCTTACTGGCTTTTAATA
TAAGTCAAGCGAACGCCGGTTCTTTCATCGAGAAGAATAAACCACTGGTA
ATTGGTATCGGCGTTGGAGCTGCCATCTTCATCATTTTGTGTTGTTATTG
TTGCATCAAATGTcgaatgaagaagaagaagaaaaaagacgcagaaaaac
aaaaattaaaaggcAACAAAGAATCCAAGAAAATGAAACGTATACAACCA
AGTAAAAGTGAACGCAAAGTGATGGAGGAGCTGGGGACGATCAAGTTTTC
ACTATCCTATGACATCTTATCGGAATTCTTAACAGTCAAAGTTAAGGAAT
CCGAAGACATACCCGTTCGTGATTTGAGTGGATACGCGTACTCCTATGTT
GTCATCAAGGTGCTTCCCTTGCACGAACATGATGAGAATGTCTACAAAAC
AAACTTTGTGCGTGGTGGCTACTACCCTGCGTATGGGGATTCCTTTAACT
TTCAAGTTCCCAAAGAAGGATTATC
Run BLAST on NCBI

transcript from alignment at sc0000050:60583..75100-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005031 ID=TCONS_00005031|Name=TCONS_00005031|organism=Clytia hemisphaerica|type=transcript|length=14518bp|location=Sequence derived from alignment at sc0000050:60583..75100- (Clytia hemisphaerica)
GGATGTTGCGTCCTTTATCAAAACTTTAGTGTTCTTACTGGCTTTTAATA
TAAGTCAAGGTACGTTTATCATTGTCAAATATTTTGTAGATGATGAAATG
ATTTACAAGATCATAGTAACACACTTTGGTTTTCAAGTAGCACCCTTTTT
TAGCTCAAAATCTTCTAGTCCTCTTCGAAAATATACAATTTCCATCCATG
ATACGTATTGTTCCTAGAATTATTCAAACTTTTATTTAGAAGTTCGTAAA
ATATTCATTTATTATAAAATCTCCACGGTACGTTACGTTAAGTGATTCTT
TCAAAGTCTTTTCAGTCAATTGTCATAAATTTAATAAATCACCTATTTTA
AGTGTCGTTCCTGATAATATCCAAACTGTAAATTTACGAAATACTTATTT
TATCATGCAGTCTCTGTAACCTTGTTGTGGAGAAATTCAGGGAAAGGAGT
GACTCCCTCCCCTACCTTTGGGTAGACAGCTAGAGAAAAGGGAGTCTTTA
GGTCGCCCTCGACTGTGGAGATTAACTAACTCAAATGCCCCTCTCAATGG
TGGGATCTTTAAGAGGCCCCAAGCGGTTTTCGTGATGATGTGATAGGGAC
CTTTTTCTTGCGTGATTGCGTGATCAGAGGTCAAAGCGTGATTGTGATTT
GAAAGATTTTTGAGCCGTGATGCGTGAATTTGACTTTTTCAAAGGGTGCT
TGACTATCCAAATCTTTTGCTGATTTTGGTGATCGTAATTGAAGATAAAA
AATTGCGTGATATTGCGATCATACTTACCACTGGGGGGGGGGGCTCCTTT
AACACTAAGAAAAGATGTAGATGTTTCACTACCAATCTGTGCTTTATTAC
GACTAGTACTAGCAATGGAATTTAGTCTTTTTCACATTAAATCCAAATTA
ACCATGCGACCCCTGTTATTGTGCTGTGTTACAACACATAATATGTCCCG
TCACACAATGATATGTAAACGTAATGCTAATCATGCTAATTATTTCGATG
AAAGAATGAAAGACAACGTATGTGTGGGAGTGATTCGAAAAAAAATTAAT
ATGAGGTGTCCTATATTTATAAATGGTTCAAAAATACCGGGTGTGCCACA
AAAAAGTTTCTTTCTTTAAAACTAATTTTTTCAAAATCTAAAAATGTCAA
AAGAACCATTCGTATTTCATTGGAAAGAAGAAAGATAAACTTAAATTTTG
ATGGGTCATTTATTAAATTCGATTCATTAGCTCAAAAGTTATATTGAATA
AAAAAGTTACTTTCTGAAAGTGCCCAAAAGCGTTGAAAATCGACCTACCA
AATTAAAAAGAAGCTTAATTACATGATACATCATTATCTTCGTTTCAGTC
ATTAAAAATGATAATTAGCTGTCTAAATGACCTTTTGTTAATTAAAGGAA
GGTTGGATTTCAATAAAAGGCAGAAGATTTGTCGAAAAAGGCCAAAAAAT
CTGGTAAAATTCATAGAAATACATCAAATATGGGTTTCGAGATTTATCCA
ATCTAAAACCAAAAATCGGAGGAAAATTTCGGTAAAAGTAAATTAAAGTG
ATTTTGATGAGGATTTTAAAGCCTTTCGGCCTTTCTGTTTCGAAATTTAT
GTGTTTAATTACTGAAAAATGCTTTTAATCATGAGACTATTGCGATTGCC
AATTTTAATATAAAAAATTGATAGGTCAGTTTTTAACGTTTTCGAGCACT
TTCAGAAAGTAACTTTTTTATTCAATAGAGTATAACTTTTGATCCAATGA
ATCGATTTTAATGAATGACCCATCAAAATTTAAGTTTATCTTTCTTCTTT
CCAATTAAAATCATTAGATTTCTAGAAAATTAGTATTAAAGGGAGAAAAA
ACCTTTCTTTTGGCGCACCTGGTAGTACATCAGCTACAAATGAATCTACC
ATCTTGATTGTATGACGCGTGTTGTTGCCTAGTAACGATAGCTCCATAAA
CGAACGAGCAATAAGAGGAAGCCTTTCCAAAAGGCAAAAGTGTTTATTGA
AAAATTCAAATCTTTCTGTATACTTCCTACGAACAATTGAAATATTTTTG
AAAGTCTTCATGGCTCGTATAACTTTTGTGTGTTTGGTGTATAGGAGCGT
TGGATATTTTCAATATATCTTATTTGAAATCAGAATCACAAAGTATAAAG
GCATGGGACACATAAGAATTTAGTTACATTACATTACACATAGTAATTTA
AGCTATTNAGCATGGGGCACATAAAAATTTAGTTACATTACATTACACAT
AGTAATTTAAGCTATTTTATAAAAGACCTGAGGTAAGAAGAATTTTAGTT
ATCAGGGCCCAAACAGTTCTAATGATCATATAGTCTGTATTTAAAGACGA
CCTAAACGGGATGTCAGTTTTTTTGCTGCACTGTTCTTATAAGAGAATTA
CAAAAAGAAGAAGAAGGAATCCCTAATTTTTTTCTTGCACTGCATTAAAG
CACAACAGTTCGTACCATTCATATATTGGTGAACTGGGTGTTTGATGACT
CGTAAAAACGAGAGAACTTTTTTGGCTAAGTCCCATTGAGCCAAAGTTTG
TCAAACTCAAAGCAATCTAGAAGAAGGTGTAAATTTTAGAAATACCTTCA
ACTAATTATGCGAATCGACGAATTTTGCTGACAATTCATAAAATTAATTC
TCGAATTTGTTGCTTTGCCGAAATTAATCTGATAAACTGGATAAACAGAT
ATATCATCCATTCTGCGTATGTCACGATCTGTTCTTAAGGAATATAGTGA
ATATGACGATCTGACCCGGTTAATTGATATTCATGACGTTATGTTTTCTA
CGGAAAGACCCCGGTTTTTGCCAGTAGTGGCAACTTTTATACAACTTTTA
TTTAGTTTAAAGTTGCCACTACTGAAAACTGGGGTATTTCTGTAGAAAAC
TTTACGTCGTGAATATCATAAATTAGTTGTTATTGGTTCTCTTTTTATCG
TTTTAGCGAACGCCGGTTCTTTCATCGAGAAGAATAAACCACTGGTAATT
GGTATCGGCGTTGGAGCTGCCATCTTCATCATTTTGTGTTGTTATTGTTG
CATCAAATGTCGAATGAAGAAGAAGAAGAAAAAAGACGCAGAAAAACAAA
AATTAAAAGGCAACAAAGAATCCAAGAAAATGAAACGTATACAACCAAGT
AAAAGTGAACGCAAAGTGATGGTATTATATCAATTTTGTATTTGATATTT
TTATTTCACATTTTCTTGGATACCAGGGTTAGAATTAGTCCAGATGTTGG
AGCTCAACTACTTTTTCCTTTTAATAATTCTGATTGGGGGGAAAGAGAGA
GTAGTTCTATTGTAGCGCCATCATTCAAATCAGAAAGTGAAGATAGTATA
CGGCAGATTTTCTGACTAGGTTAGAATGTTCACCACATTGATGATTGAAC
ATACAACGCCTTTGTTAATAAGAATATGCTTTATAAGAATATTGACGATG
AAAAATTAAGAATATGCTAAGAATACCACTATCATGGAATTCAACAACTG
GGCCTAAGAATGCATTTTAGCTGTTAATTGTCAATTATCCCCCAGCAAAG
CTAAAACTTTTGACTTCTTTTGAGTCTGGGATCGGATCCTAACCTAATAC
CATACGAATATTTTTGGATCGCTTAAAGGGACATAACAGCACTTGCGAAA
TTTGTAAACAAACTGTATGCAGCAGATGCAAAATCAAAACAAATGTCACA
TTTCAAAATAAAAAATCAAACCAAATATGGCTAATTTTGATTGTTCAATT
GTTTTACAAGTTTGTTTTGGACCCGTGATTTTAATTGTTCTCTTTAATGA
CACGTGGTTTGTGCAATGTTTACATTTTAATACTGCAATGTCCCTTTAAC
ACCAAAAGTTAAGAATATCCATGATGGAATTGAAAAACACTATAATTCAT
ATTTAAAAAAAGCGTGAACACTATAAAAGAACATACGGCTTCGATGGCCA
AAATATCAAGAACAAATTAAGAACAACTCAAAAAATACCCGATAACTTAG
GATAACGAACAAAAATACTCGCAAAATAGTGAATTATAAGAACATTTTTA
GCCCTAAAACTCAAAAAGTCAAAAACATCCGATGGCCTCAAGAATATGTC
AACGCAATTAGAAAAAATGCTAGTAACTAGGTCTTTACTTGCCATATTTT
TGGTCTCAAAATATTGACGCCGGCGTGGAAAAACTCTAAAATTATATGGG
ACAAAGCATTCTCATAGTACACGCTTTTTTTTATAAGAATACACTTTATA
AGAATGTCAATGATGAAAATAGCCAAAAAATTAAGAATAAGAATATCACC
ATCATGGAATTTTGCTACTCAAGCTATAAAGAATGCCATTTTTAGAGCAT
TTTCGATTATAAATTGTCAATTACCCCCAAGTAAGGCTCACTTCTTTCAC
AAAAATGCCATTTTATGATTGAGACGTATTTACTAAATGTTAAATCTAGT
CTGAATTAGGATCCTAACCTAAGAATGCTGTAAGAATATTTTAGGATGAT
TTTCCCAAAAAAGTTAAGAATATTCATGATGAAATGGATTTACACCATTC
TTATAAAAAAAAGCGTGTAACATTTTTCTCCCGCCCCTACAAGATGGGTG
AAGTATTTCCCAAAGTTATGTTAATGTTGAATATTTATTTTTTACAAACT
TTCAGGAGGAGCTGGGGACGATCAAGTTTTCACTATCCTATGACATCTTA
TCGTAAGTTTACTTCAATTATTTAACAAATTTTATTTTTGGAACTTTGTA
TCAAAAGAGGTATTTGTTTTATAGAAATTCGGTAAAGTAAATTTGATACA
ATCTCCGAAATGAAAACCGTNTTGTTTTATAGAAATTCAGTAAAATAAGT
TTGATATTTTATCAATTAATACAGGAAATCTCCGAAATGAAAACCGTTTT
TGATAAAAAGCGAATGCTTTCGGCCCATTCTTTCCGCGATAGTACCGATA
GACCTTTTTACTCTCTCTTTATTCCGTGACGTATTGTAAGCTATCCTCTC
TTTGTGTCTTCTAATTATTTTGATAACCACTGGGAATATTCTCCTTTCAA
AGAGTAATCACAGCAAGAAATACAATATTCGTTTCTGTTGTGTGAGCATG
TTCATATTTAGCTTTTGATATTCCTTTCATGGTTTTCGTTGCTGCATTTT
GCTATTTAGTCTTCATTGATGTCTGAAGAGCAGAAACTTTCGCGAGGCTG
CAAAATCGCGAAATTTCCCAAATCTTACTTTTGAAACGAATTTAGCGGAT
ATAACTTTCACGAATTTTAGAATGTTATTAATGATAAAAATGCACAAAAA
CTGAAAACTGAGTATAAAATCGCGAAAATTTCTGCCCTTAAAGTAGACTT
TTTTAAAATTTCAAAATTCGTTACTGTAGAGTACAATCGCGATTTTACTC
TGATACAGGGTAATGTTTTTGACAGAGTCATAGATTTTATCTATGATAGA
TTTCCGTGAGTGGCAAAAATTCTGAAGCTCTTGCGTTGATAAATACAGGG
GAGTCTCCATAACTCGAACGCGCACGGAGAACGCAAATTTGTTTGAGAGT
TTGGAAATTTCGAGTTATGGAGTAAGGTTTATAATGTATTGTTAACTTAA
GGGACGAGAAACCTTGTTAAAGTTAAGGAGATGTTCGAATTATAGAGGCT
CTCGAGTTAAAGAGACTCCACTATTATTCATGATAATATTCTCTCTGTAG
TAGTTTTTTTATCGAGATATAACTTATAATTTCATTTTAATATTTCTGAA
ATCTGGATCAGTGAGATCACGTAAAAAATTATTTAAAGGAAACTGCGTAC
ACATCTTTTTCGAGAACATCCAAAATTTTTGAAGCATTTAAATGTTCTTA
ACTTTTTCTTAGGATTTTGGCCCCGAAGCCTAATGTTTTTGTATAGATTT
TTCTTATAAAAATAACATGTCTGTTATACTCAATTTAACCTATCAATTTT
TGCTATGAAGTGTTGCTAGCCCTCGGTTTACTGTTTACGTATGAAATGCA
CCTAGATCGACGCAAAAAATGTAACAAGGTCAGCCATTTTTAATGAATGA
AAACCATAGAATATTAAATATTCAAAATTATTTTAACCTGTATTGGCTGG
CTATAGCTTTTTTTCGCTCGTTTATTTTGTTAACATGGCTACTCTAATAA
AATATCGCATCTTTTTTATTCGTGAAATATTCATTTTAGTGCTAGTTTTT
TTTAATATTTTTGAGTAACACTTTTAACCCTCACTTGAAAAAGAGTTACT
TTTTGAGTGAGAAAGGAAAGGAAAAGAAGGGTGTTGAAAAAGTTTTCGTG
AAGAAGATTTGGTGATTTTTTCATAAATTAAGACAGAACGCTTCTATTAC
TCTCTATATACATTTTCCCACTAAGTTTTCAACTAATCTTCTTTTAAAGT
GAAAAGAAAAAGATTTAGAAAAGGATGGATGAAATATACGCAGCGATTAA
GAAGAAGGATTTGACCTCCTTGTCCAACCTGATTACCAGCAAGAACATCA
ACACATCTGACAAATCGAAACAAACACCTCTGACGTTAGCTTGCGAACAA
GGTCATTTAGATGTCGTCAAGTTTCTCGTTGAAGATAAGAAAGCAAACGT
AGATCGAAAAGATGGTAAATCAAATACACCTTTGTATGTAGCTTGTCTTG
CCGATCACCGACCCATCATCACTTACTTGCTAGAGAAGAATGCGGATATC
AATAAACCGGCAAGGAATAACTTCACTCCTGTTTATGCTGCAGTTGAGAA
AGATAATCTAGAGTTGCTTGAATATCTTGTGTCAGTCAAAGCTGATTTAA
ATGCCAAATGTTCCAGAGGTGGATTAATCAGACACGCCTGCTGCAAATGT
GATGCACCAAAATGTTTCGATTACTTGTTAAAGAAGAAGCTTGATCTGAA
CACTTACCATGAACAATTGGAACAGTATCTTAGCTTTGAGCTGTCTTTCC
AATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACCATGGAG
TACCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTTAAGTAA
AACCAAAGGTCGCGAAGAAACACCCCTTCATGTCGCTGCTAAATGTGTCG
ACAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTGAACCAA
AAATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTTGGAGCG
TAGTAAGGACCCGAAAGCAGAAAGTGCACGCAAAGTGATGCCCATAGAAT
GTGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCGAATGCT
GCCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTACGGCTT
GAAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAGCGGACG
TTAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCAGCTGGT
AAACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAGTCATGG
GGCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCCACTTGG
TTGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAACTGCCT
TGGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAAAGAAGG
CGATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAGTCTTTA
AATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAGAAAGGT
GAAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGGGGCAAG
GTGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCAATTGCG
ACGAACCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGATAAGAAA
GGTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTACAATTG
GAAAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACACCAACAT
TAGACAGGTATGCAATTTTTATTTTCCTAAAGTGGACGTAAAGTTTTCCA
AAAAAGATAGAGGTTTAGAAATCATGACAACTTTTTGGAATATTTGATAA
TGGGGCCTCTGTGGTTCATTTCTGCTAATTTGAGTTGTTTTTGGCAGTTC
TAGCCCTACTTCGATGGCTCTAACTTTTTCTCCAGCAAAAAAAATCTTCA
TCCTCTACCTACTTGTTTTTAAATGCATACTTTTGAGACTACCTTAAATA
AATAATAATTGATATCTTTCGTTGCGTTCCAAAATCTTCCTGGTGAACTT
TGATTTCAGGGAATATTATGTAAGTAACTCCCTATGTCGAATATTTAACC
TTGACTTATAGATATTTGCTTTGTGCCCAATTTTATATTGTTTCTTTTAT
TTCAAAGGTGGAACCGTCGTATGCGAGAAGGCGATAACCCGGAAAATATG
GATGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGA
TCTGAACACTTACCATGGACAATTGGAACAGTATCTTAGCTTTGAGCTGT
CTTTCCAATACCTTGCTCGACGAAAAGATGAAGCAAGAGCCAAAACCACC
ATGGAGTATCTCAAAAAGCTACTCAAGGCGGGTGCAGATACATCACTCTT
AAGTAAAACCAAAGGTCGCGAAGAAACACCCCTTCATATCGCTGCTAAAT
GTGTCGACAATGAATTGATGTCAGTTCTATTGGAGCATGGTGCTAACGTG
AACCAAAAATCTGCAAACGGTGCCACACCCTTGCTCTCTTTGTTTTTCTT
GGAGCGTAGTAAGGACCCGAAAGCAGAAAATGCACGCAAAGTGATGCCCA
TAGAGTGTGTACAGACACTTTTCAAATACAAAGCTGACCCGAACATCCCG
AATGCTGCCGGTGTTACACCGTTTCTCTACTTCATGTCGTCTTTTTTCTA
CGGCTTGAAGGAGGATGCCCAATTCCTAAAAATGTTCTTGGAAAATGGAG
CGGACGTTAATGTCAGTGATTTTGCTGGTGAGAAACCGATCCATTTTGCA
GCTGGTAAACAGGGCACGAAAGTCATTGATTGCATCAAGATGTTAGTTAG
TCATGGGGCGGATATCAATACGCCTGATGGGAATGGTGAAAATGTCATCC
ACTTGGTTGCTAGAAGACAAGAGAGTAGCCGTATGTCCTTTTTTGAAGAA
CTGCCTTGGGATGTTTTGATTGAGAATGGTGCGAAGATTAAAGCTAACAA
AGAAGGCGATTATCCTCATTTCGTAGCTTTTATGTCCAATCGATTTGAAG
TCTTTAAATCTATGCTTAAAAATGGTATTGACATCAATGTGCGAAACAAG
AAAGGTGAAACATTTCTTCACATGTTGCTTCGACGATATATTGAAAACGG
GGCAAGGTGGGGACAGGATCCAGTCGAAGAAACGATTCAACGCATGGCCA
ATTGCGACGATCCTGCCGATTTTCCAAAATTTGACCTTTACCTCAAAGAT
AAGAAAGGTCAAGATTTTTATGATATTCTTATGAAAGGTGGTTACGGGTA
CAATTGGAGAAAGCAGTTTGATTTGTTGAAACAGAATGGCTATGATACAC
CAACATTAGACAGGTATGCAATTTTTATTTTCCTAAACTGGACGGATTTA
GAAATCATGACAACTTTTTGGAATATTTGATAATGGTGCCTCTGTGGCTC
ATTTCTGCTAATTTGAGTTGTTTTTGGCAGTTCTAGCCCTACTTCGATGG
CTCTAACTTTTTCTCCAGCAAAAAAATTCTTCATCCTCTACTACTTGTTT
TTAAATGCATACTTTTGAGACTACCTTAAATAAATAATAATTGATATCTT
TTGTTGCGCTCCAAAATCTTCCTGATGAACTTTGAAGTAACTCCCTATGT
CGAATATTTAACCTTGACTTTTAGATATTTGCTTTGTGCCCAATTTTATA
TTGTTTCTTTTATTTCAAAGGTGGAACCGTCGTATGCGAGAAGGCGATAA
CCCGGAAAATATGGATGTAAGTGGTGGTAGAGCTGCTGGCGGATTTGATT
CGGTAAGACAGCTAGCATCTAGAGGTGCGCCTGCCCGAGGTGTTCCTTCG
AGAGGTGCAGGCAACAGAGCTATGAAATTCGATATGGGATCCCAATCCAA
ACGTACAACAGGTTCAAGACCAATTGCTGAACGATCGCCACTGACTCCTA
CAAAATCACCGAAATCATCTCCTTCAAACGAAGTCAATAATGAGAAAAAG
ACAGCCGGACCGCCTTTAAAAGCGACGCCGGAGACGGAACCGAAACCAGA
ACCAGAGCCAGAACCGGAGCCAGAACCGGAGCCGGAACCAAAACAGGCGG
AAGAGGCGGAAGAGGACGAAGACGCCCCAAAGGATGTGATGATTTCTTAC
AACTGGGGTCACCAAGCAACGGCATTCAAGATACGTGATTACTTGCGCGA
TAACAGCAAACTGTCCGTATGGATTGACACGGAGAAAATGTCAGGTGACA
TTTACGGGAAAATGGCGCAAGCGGTTTACAAGTCCAAGGTTATTGTTATG
TGTTTGAGTGAAAAGTATGAGATGTCGGATAATTGTAAGTTTGAGTACGA
ATATGCTGCCAAGAAGAAGAAGAATTTTGTGCCAGTAATGGTTCAACCAG
ATTATGAGCCGAGAGGAGGGTTCAGTTTGGATATGATTTTGGGAAGCAAG
TTGTATTATGAGCTATTCGAGGAGAAAGACTTTAAGGAAAACATTCCGAA
TGTTTTGAAAGCTATTCAAGGAGTTTTGGAAAAGATGTAAGTTCTAACGC
TTCAGAATTTAGAAGACGATGGAGTTTTTTTGCTAATTATTACCTAGTTT
ACATATTGATTGTACATACCGTGTGTTGTGTGTTATTTAGTATTAAGATT
TTGTAGTCATGTTTTTATTAATGTTTATTTTTAGGGTTTCTTTAATAGAT
TTGTTAACATAAATTTTCTTTCTTTAGTACTCTATATGTAGGAGATGTGA
GGGAGTTTCTAAACATCGACCAGAAATGGCGACCACGACAGGCGACCAGA
TAAATTTGGGTTATCGAGTTTACCTGCTCTCTCCACCGTAGAGAACATCC
AAATCGAGTCTTGATGTGGCTTTCAAATGAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
TTAAATTTCTTATTGTTGATCTTTCCTTTACAATGATTTTATAATGCAAG
TGTATTATCAAGGGTATATCATTAATGTCTAAAATACACTGAGAAATAAG
TATTAACGACAAACCAATAAAATTTACCATTAAATTACCATTAAAGATGC
TACATTACTGATTTCTTGATCAAAAAATAGTCATCAAATACGACAGAGAT
ATAACAACAGAATTTCAGATGTTATCATTCCAGCCGCGGCTTTCTTATAC
TATGATGTGAATTACCTTGAAAATAGAAAAAAATTGCGAAATATCACCTC
AAAGATGAACTTAGCCTGCATTCACACTCTAGCGAGTAATTTTTTTGATA
TGAGTATTTGAGATTGCCGTTAAAAACAAAGTTTTAACGACAACACTTGT
GAACCAGATACAGTATCATGTCTTTTTCACGAAAAAATTAAAAGAGTGCA
AGTGGGAATTATTTTCCAGGAAAATTCCTTTACTATGTATAATTTATGGA
TATATATATATGTTATATATAGTCATTTTAAATTGATTTTCTGCATTTAG
CACTAGGATATTTTCTAGACTAATTACATTTATGTTCTTTCAAAAATAAC
AACGTGACATTTAACTCTGACCTGAAGTTTTTTTGCATCAACCTTATAGA
GATAAGAACTCTTTTAAAGACCTTTAACCCCCTCACCCCACCGGAATTGT
GTTTAAATTCGTTGACGCTNAATCTTTAACCCCCTCACCCTACCAGAATT
GTGTTTAAATTCGTTGACGCTATCAACCCTGTTATTCATTCATTCAAAAG
CTGATAAAAACCATAGACCGACGGATTAGATAAACATTGTGTCCTTGAAA
AAGTGGGAAAAACAGCGCTGGTAGAGTCTAATCGCCACTGCTTACTCTGC
CCCGAGCTAATCCTGGGCCTACCTCGGTTTTTATATTGATCCCCGCCTCC
CAACCTCGTTCCCTGCGTATTATCAGATTTTTATGCTTACTGATAGCGCC
AATTAGTAACGTGAATAAAGCCTGGGATACACGGGGACGAGGTTGCCCGC
CTCCTCAATCATTCCATTTTTTTAGTTACGATCATCTAACTAAAGAATAT
GAGCGTCAAAGAGAGGCTTTTATGAACGAATAACTACCCTCGTTTTTTCT
ATTTCTAATGCCAGGGAATTCTTAACAGTCAAAGTTAAGGAATCCGAAGA
CATACCCGTTCGTGATTTGAGTGGATACGCGTACTCCTATGTTGTCATCA
AGGTGCTTCCCTTGCACGAACATGATGAGAATGTCTACAAAACAAACTTT
GTGCGTGGTGGCTACTACCCTGCGTATGGGGATTCCTTTAACTTTCAAGT
TCCCAAAGAAGGATTATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002849XLOC_002849Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005031-exon-sc0000050-1575043694:75042..75100TCONS_00005031-exon-sc0000050-1575043694:75042..75100Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1575043694:71930..72144TCONS_00005031-exon-sc0000050-1575043694:71930..72144Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1575043694:70399..70445TCONS_00005031-exon-sc0000050-1575043694:70399..70445Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1575043694:60583..60786TCONS_00005031-exon-sc0000050-1575043694:60583..60786Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1510915933:75042..75100TCONS_00005031-exon-sc0000050-1510915933:75042..75100Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1510915933:71930..72144TCONS_00005031-exon-sc0000050-1510915933:71930..72144Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1510915933:70399..70445TCONS_00005031-exon-sc0000050-1510915933:70399..70445Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1510915933:60583..60786TCONS_00005031-exon-sc0000050-1510915933:60583..60786Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1491911889:75042..75100TCONS_00005031-exon-sc0000050-1491911889:75042..75100Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1491911889:71930..72144TCONS_00005031-exon-sc0000050-1491911889:71930..72144Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1491911889:70399..70445TCONS_00005031-exon-sc0000050-1491911889:70399..70445Clytia hemisphaericaexon
TCONS_00005031-exon-sc0000050-1491911889:60583..60786TCONS_00005031-exon-sc0000050-1491911889:60583..60786Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:60583..75100 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.88747	1.5569	1.12911	0.0156553	30.188	19.7508	22.9393	23.3007	8.74611	9.5792	9.75011	6.67444	8.86437	6.4965	9.53014	10.4628	3.49985	6.20683	6.41589	14.5181	3.47863	4.0242	0.65535	3.24298	7.78636	10.7263	6.15929	5.40026	4.19593	7.68407
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005031 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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