TCONS_00005024 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005024
Unique NameTCONS_00005024
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1594

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005024 ID=TCONS_00005024|Name=TCONS_00005024|organism=Clytia hemisphaerica|type=transcript|length=1594bp
CTCCGTTCCAGAAGAGGGTCAGGATAGGGAGAAGGTCAGATTCTTTTTTC
CAAAGCATGAAGCACATTTTCACTCAACCTTATTCGTTTTATTTTAAGGG
ATATTTAGAATAAAAGATAAGTCAAGACTGTTTGTGTATATCCAAGAGCT
GTAATGGCTGctcaaagaccaaagaaaaaCAATTCACCAATAAATGTGAA
ACATCAGCCATTGAAAGCCACAGTACCTCTCTCGTCACTTGTCAGGAATA
CAAGCCCAACTAGGAGAAGGACAAGTCCATCTTCACCAGGATTACCTGTT
GATAAACGAAATAAATACAGAAGAAGCCCTGACGTGAATACAAATGGCGA
ATCTCGAAATTTATTCTCACCTCTTGGCTCGAAAGTTAATCTCTTCAAGC
CAGTTGCAAGTAAAGGGAAAAATATTCGACGCACAAACTCATTGGAAACA
CTATCAAGCTCGTACATCAATGGACAATGGCCTCGTGAAAGTGGTTCAGC
ACAACAACAGACACAATGGGACTCTGACTCAGAAGAAAACCCTTTGCCAC
CTACCACTTATGAACATAGAAAACCACAAACAATAAATGGCAGTTCAAAG
GAGGTTTTCAAGCAACACCTTCAACGCAGTAAACAACAATCATCAACTCA
TATACAACATGGTAAACAGTCACCTTTGCAAGGTGACCACTCAACATTTA
GTCAATACTATCCTACAGCATATTCTCAATCTAAACCTGTTCCCATACCA
CAAATTCCATCCAGTCCCAAGAATCCAATGCATACACGCAAGAGTGTGGA
AGGCTTGAATATTGAACTTGCTGGTCTGGAATTGGAAGACAAAGTTGCTG
ATCAGGTATTTGCGCGTACACCTCCTGACGGCCACAGACCACCTGTCCCA
GGTCAATACACACCCAAATCAGATGTCAAAAATGTTGATACTCAGACTGT
CAATAGTTGGATGGATGTTCTAGCTAGCTTATCACCAAATAACACAAGAG
ACAAACGTAGTAGCtcaatttcttcaatttcaCCCGGCTTTGCCATTTCG
CCGGCACCGACAGACAATAATACCCTCTCACCCAATCATGATTCTTCGAA
TAACACATCTCCGACCAAACCAGTATCTTCCTTGAACCTTGAACCACAAA
CAGAAGATGTTTCACATGTTCCAAAATATGCTTCTTCGCCGAAACCCAAC
AACTCTTTCATGTTCGCACGTGGACCGCCTGATGGAGCTGAAAAAGTTCC
TCTCAGTTTGGACGAGATCGAAAGtGACGCCAAGGAGGAGAATCGAAACT
CGTGCCCGGACaaatccaaaatgaactttcagtGTAGTACCAattctgca
ttttctgaaattttgattcAACGATGTGCTAAGAAGGTTTCTTGAGATTT
CGTCCAACTTGTATTAGTGTGGATTATGAAACGAGTGGATATTCTTGaaa
tgcgtaagtcatttttctagcggaaacaccctaaaaaagccgggatttga
cctctctctgttactaaaaatagaaacacggagctcaaaaaccggctttt
ttgggtgcttctgttaaaaaatatgacgtcatcttgacttgacg
Run BLAST on NCBI

transcript from alignment at sc0000050:31745..49173-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005024 ID=TCONS_00005024|Name=TCONS_00005024|organism=Clytia hemisphaerica|type=transcript|length=17429bp|location=Sequence derived from alignment at sc0000050:31745..49173- (Clytia hemisphaerica)
CTCCGTTCCAGAAGAGGGTCAGGATAGGGAGAAGGTCAGATTCTTTTTTC
CAAAGCATGAAGCACATTTTCACTCAACCTTATTCGTTTTATTTTAAGGG
ATATTTAGAATAAAAGATAAGTCAAGACTGTTTGTGTATATCCAAGAGCT
GTAATGGCTGCTCAAAGACCAAAGAAAAACAATTCACCAATAAATGTGAA
ACATCAGCCATTGAAAGCCACAGTACCTCTCTCGTCACTTGTCAGGAATA
CAAGCCCAACTAGGAGAAGGACAAGTCCATCTTCACCAGGATTACCTGTT
GATAAACGAAATAAATACAGAAGAAGCCCTGACGTGAATACAAATGGCGA
ATCTCGAAATTTATTCTCACCTCTTGGCTCGAAAGGTATAATATCCCTTT
TTTCAAGGTATATTTTATTTTGTGGTTCCAAACAAACTAGAATGGCTTTT
CCATTATTTCACTTAAAGAAAAGGGTTTAGCCTTAACTTTTACTTAGAAT
AGGTCACAGTATATTTCCTTCTTCTAGGTATAGTTCTTTATAAAAAAGAT
CCACCATTTTGGATTTTCAGTTTTCCTGCAATGTGTCAATTTTTACCTTA
CTACAAATACTAAGATGACTCTTTTGAAATCAGTTTTCTTTGAAACTCAT
AACATAACTATGGATATGTCATTGTGCCTGCCAAAAATCCCTGACATGAC
AAATCTTTTTGATGGGGGGGGGGGGGGGGGGGGGGCCCNAGATGCTATTT
ACACTGCTTGGCCTCGGTCCACAGTACTTAAGATGCTATTTACACTGCTT
GGCCTCGGTCCACAGTACTTAAGATGCTATGTACACTGATTGGCCACGGT
CCACAGTGATATCTTTAAGGGGTGTTGGCTTACCTTCGGTAACCTTAGGG
CCTCCTTACATTCCTAGTGTCATTGTCCTGGCNACCCAATGCTTTCAACA
TTTTCTAAACTGAATTATATTGTGCTCAATATTTCCTATCATAATTTGAA
CTTGAACATAGATATGGTGAAAATACGGTGCTGCTAAGGATCACGCCTAA
GTCAAGAAAAACGAAACTAAAATCTATCGCTAGATTTCGAAAAATGTAGT
CCTCCATAACAAAAGGAATCGCTAGATACAATCCGTCGTCATGATTACGG
CGCGTTCTATGCGCGTTTAGGATGGGAAACAAGTGGCTTCAATTTCTCTT
ACCTGAGAAGGGTTAAAGTTTTTCCCCTAGTCCTTTGGGCTTGAAACTCA
ATGAGGTAGGGTCAATTATCATTGCGGCTTTTTGATCCTGTCTGCGATAT
ATCGTTAAAATGTCTGTCAAAGTACAGGAATGTGTAATTAAATACATACA
GATAAAAGAGGAAAGAGTCGATTAAAGAAATCACGCTACTTCTCTTAATC
TTTTGTCATGTCTTTAAAGCTTTTGTCATGACAAATGTAATATTATAACC
CCCAACGGGAAATTGTGTTGTTAGATTAAGGCATGTCTATGAATGCTTAA
TTCAAGAAATTGTAAAACGAGTAACTTGGGTAGTATCTTATTTAAACGAA
ACAAAGGGTGACAAAATAATTAAATACAAATTATTTTCCTGCTTTAGGTT
GAATTTACGTGTTCTTATAAAGGAATTCTTAAAAACTTGCGTGAGCTTTC
GGGTCATGGTAGGGATTCCCATTATTAATCGTGTTATGATTTATTAAGAT
TAGAAAAATTTCAGATCACATCAATCGATTTTGTCGTATTTGTCGTTTAT
TGAGAATGCAAACAAATCTCTTTAATTTTTTAAAGCGACAAATTATACTT
TTGAAAGTGAAAAATGAAAATAAAAGAAAAACATATCTTAGGATTGCATT
TAACTTCCTATATTCCTGAAAAAGTTTCTTTAAAATCCTTTAAAACAGCC
TGGGAACTAATGGTCAAATTAATATTTGAATATTTTAAAATCATGCTCAA
AATGTTGCTTTTTTTTAAGAATAAAATATACGTGTTCAAAAACAATTTTT
TACAAATTTATTTTTGCTTTGAGAGTTGGTAATTAACAACAGGAGAGGAA
AGTAGGCGTTTGATTTGTATTTCGTAAATAAGCNNNNNNNNNNNNNNNNN
NNNNNGGGGGGGGGGGGGGGTAGGAGTGGCCCTCAAGCCAAGTTTCCAGG
TTTCACCCACAACCCACAGGGTAAGGCCCGGACATTCACGTTGAGTTTAG
ACCAAAATAACAAAACATTCTTTTAACCAGAAAATTGATCCTCAGACCAC
AAAATTTTGGACTTTAGCCTCCTAAAATCCTGCTTGAAGTTTCAGGTAAT
ATCCAGGACTTTCTCAAGTTCAAAATTGCCAATTGTAGACCCTGCTGACA
CACTGGACTGTCTGGTGTTTTTGTCTGGTGCCAAAAAGTATTACCTTAAG
TGGATAAATTTTTGCATTGATTAATTTTTGCGGTTTTCGCAAATTTTGGC
CTTTTTCGCAAAATTTAGTCCACGCGAAAATGTTGAAGGCCTTTGATTCA
CAAAAATTAGTCCACGCGAAATTATTTGGAATTTTACAATCGCGAAAATA
AAAGTTCGCGAAATCAAAGAAGATAGATGGATAGATAGACAGGCTAGCTC
TAAAGCTCTAAAACAGCATTTAATAACATGAAAACCAGAATATGATTCTT
CAATGGGAATCAAAACTATAAAGTGCACTTACAAACANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTTTATATCTTTATCTTAGCTATCTTTACCTTTTCATTTTTGTT
TTTTTATGTAGAATTAGCGAGATTAGGCATTTTTTTGTCTTATGCAAATA
TAAAACTAGAACTAGAACTATTAGTGTACTATTTTTAAATTTTTTAAATT
TTTATGAATTTTAATCTAATAAATCTAATTTAAAATTGTATAAATTACCT
ATTTATTCTGATTTTTTATATCTTTATCTTAGCTATCTTTACCTTTTCAT
TTTTGTTTTTTACGTAGAATTAGCGAGATTAGGCATTTTTTTGTCTTATG
CAAATATAAAACTAGAACTAGAACTAGAATTGTATTGTAGTGCCACGGTG
GGTATCAAACTCGAGCCTCCTGGACAGAAGTCAACAAGCACAATAACCAC
TATACCACTACGCGAAATCAAAGAAAGAAATAAAATTATTATATCACGAG
TTCAACTCTTCATTTCAATTATAAACTCTAGTAACCTCCTAAAAGTACTT
TATTTGAAGTTTTTTGAAAGCTTTTGAGTGACTTTGTCTGCCTTTGTTCG
ANCGAGGATTGAGCAGAGAACGCTTGCAGAACGCCCGTGAACTCCCGTGG
GGTGAAAAACTTCAATCTGTCAATCATTTTCTCAAGCGAAGAGTACGCAA
AGCGTATCAGTGGATAGTATTCAATTATCATTATCCCTTTATTTTCATTC
CTAGAACTTTTGTAAAAAAAAGGAAAAATAGAAAAGTTTTAGTGCAGCTA
TTCACATACTGAATTCTATGTGGCGTTTTTTTCAAACTTCAAAAAACTAA
TTATTGTCCCGCTTTTGCAGGACTTNTGAAAGATCTTCTATGTTGCGTTT
TTTTGCAAACTTCAAAAAACCAATTCTTGTTCCGCTTTTGCAGGACTTTG
GCGTACGTGCTTGTGTGCAGCATAGGGTACAAAGTCCAAATATGTGTTTC
CCGTAATTTTTGTATGAAGAGTTAGGTCTATACTGATAGATAGATATGCC
CTCCGATGCATCGGAATGGGTCCTATCATCCATGATAGAGTAGGAATCAC
AGCGCAATCAGACATTGCAACCCTGCAGATGCGAGCTGCCAAGTATACCA
AGATCTCAAACTACACGAGAGTATGGATGTCCTCGCAGGTGTAGAACCTC
CTAAGTGTCTCAGCACACCACAATGTCTGGAATATCTACCCATACTCTTG
TATCAGAGTTATGGTAGGGGTTGAAAAGACCCGGGCGAAGGAGCATTCAC
TTGCCTAGTATGTACTCTCCTTCAGCTTTTGAACACCTTTCTCATGTGAC
CCTGCCAATTGTCCCCTATTAGTGTACTATTTTTAACACACTTTTTATTA
CTGTACTATTTTTAAATTTTTTAAATTTTTATGAATTTTAATCTAATAAA
TCTAATTTAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCTCTTCTT
TTATAATTTGTTTAACAGAAGAGAAAGCTTCAGATTTTTCAAGTTTTTTC
TCTTTTTTGTCTAGTGATAAGTTATATTTCTTTCAATTCTTTTCTCCCTT
CTGTGAACGGTTAAAACTTTTCCCTGTCAAAATATTATCCTAGGAAAATG
GAAGGTAGGAAAATAATGGATTTGCAGTTCCAGTCAACGCGAAGCGGGGA
GAAAACGACTACCACTAGTACATCATTGACTACACCAGAAAATAGAACAA
ATCAACAAGATCAGTCAGAAATAATTGGGAGATCTGAAAGAAATGATTGG
TGTAAATGTGATAGATGTAGTGTTATGACGGCCTATGGTTTCTTGGAGGA
GGATGAATTTGCTGCCACAAGATAATTAAGAAAGCCGATTCATATTAAGC
TATGGAGAGAAATAAATGCGCAACTCAACATTCTGATTACACTAAATTTA
TTCTTGATAAATCTTATCCGTACATGGGTTTGGTTATCTTACATGATTTA
TTCAATGATGACAAAGCTACTACCAGAAATTATTGATATGTCGCGTATAA
ATATTTCACTTGGTATAGCAAAGGAAAAAAGAATGTCCGTAGAAGATTAC
CAACTTGTGTGCTAAGAACTGTAAGGGAGAGATTTCCCGCTCCTGATGGT
GTATACGAGGCAGGGGTAGCTACCACAGATAGCCTTATGTCATCATTGAG
ATTAGTCGAAGAGGAAGAAGAACTCGACGAATAAAAAAGCTGAATAATAT
TAGACAAATATTCATGAAATAAAAAAAAAATGAAATCTATTGATTATCTT
TCACTGCCATTCTGGAAAACTTTGTAGAGCGTTCGATAGTTTGTTCTCTA
GCAGGCCTTTCAGCAGGTGTAACGTAAAGCCGCTTTCTCTTTGTCATTAA
CTTCCTATTTCCATCTACGACTGTGTGGTAGCATCGAACAGCAATGTCTC
GAAGGAAGTCGTATGATTTCTCCTTCTTGACCTGCTTTGCCACAAACCGG
TGGGAGTATTTGTGATAGGCAGTCTTGAATCGCCCTACCAACTTTCCCTG
ATTGAGCGTTTGTTCCCTAATGATATTAAGGTTGTGGTCTAAGGCAGCAA
GCATCATACCACATTCCATTTTATCCTGCTCGTAAAAAATAGATTTGGGC
AGGTACCTTATCTTCAGTGCATGGAGAACCTCCAAGTGTCGTATAGACGT
TTAAATTGAGCCTGCGAAGACCTTTTTGGAATTCCGCGTTAAAGATAATC
TTCTTCAAGGCTTCGTGTGGTTTGGATCCTGCCTTTAGCCAATCATACTG
ATGTGATTTGTCATGGGGTGGTTAACTTGTGTAGTGGTTTCCTGGAAATT
CGTATCTGTCAACAATGTGAACAACCACGCTGTTAAACCGCTCTGTCAGC
TCTTCTTCGTTTTCGTTGCAATTTCGTACCGCCCAATAAAAATGATTTTC
TATCATTGGAGCCCAATCTGCCAGCTTCTCGTATCATTCTCTAACTATAT
TCAAAGGCAAAATATATTGCAACCGTTCTCGTATTTCCCGTGATTTTTAT
CNCCAATAAAAATGATTTTCTATCATTGGAGCCCAATCTGCCAGCTTTCC
CAGCAATCTGCTATCATTCTCTAACTATATTCAAAGGCAAAATATATTGC
AACCGTTCTCGTATTTCCCGTGATTTTTATCGCAAAAAACACTCATGAAA
ATGAAATGATGAAGTTATATGAAAGTTTCACAAGCAATGTTTTTCATTTT
TTAAAGGGAGAAAAAAAAAGAACATCAAATAAAAATGAAAACGTTATTGA
TAATCTCAGTCCAATTTACTGGAATTCACTGTAAAATAAGCTTTTCAACT
TCTTATGTGACAACAATCTACGTCACAGCCCATTACTTTCGGCATCCGGT
TAAAAATTACGTTTTAAAACAAGATGGCGACTATTGATATTTCTTTCTCT
ATTTGTTAAACAAAAAGTGCTCATAATCTCCTTATGTGGAGCTTTTGAGG
GAAAAGAGAAACGTTTTCGTAGATGTTTTTATGTTAGCAGTGATATGAGA
GAAACTTTAAAAAAGGCCGGAGGGTCCCTTTAAGGTATTAAATTACACTG
GACAAAACTGTCAGTCATTTGATGGTTATGCAAGTTTCCCTCCACTGATG
CAAGTTACCTGAATTCACGGTAATCGAACGACCACTTTTCAATTTACAAT
CGAATTTCGATTATCAAAATTTCAAAAAAATTGTGAGTGTTCGATCTCTT
TCTTAACAATCCTTCAAAGACTCAATAACCGTTTGAGTACTTTGATTGTT
ATTGATTACTATGATAACCAACTACTATCATATATCTTTAAGAAAAACCA
AAAACATTGAGCTAAAACCAAAGCACAAAAAGAAGCGCCAGCCATAAGAT
TGACCCCTTATTTCCTAGACTAGAAAACCAGTGGTCACTAATCACCTTAG
ATTATCATAGATCATTATCGATTACTTCGATCACAATCAAACGTTCGATT
GGTACCGTCTGGTATACTGTAACTTTGTGTAATGTCCATGATTTTTCAAT
AATCTTCTTGACAACAGGATTGCTTGAATTTTAATTTGATGGCAGATTGG
CAGCAACTCATGCTCAAGCTCTAAAGGAGTTGGCCGATTTCCCATCAAAG
AGGAATGATAGTCGGCCCTAGATGTGCCGCATCCCTTTGATGCTTGGAAA
GTACTTAATGGGCAGTCGTCTTAGCTTAAACTCCTATATCAGGATTAGAA
ACTAGGCTAGTCTTACCTGTTATCTTTCCCTTTACTACAATATAATGCTG
ACAAGTTGATGCAACACATCGACAAGTAATCCCTGTGAGAGAAGTTTATC
GAAATCTGCAACAAAAACGAAAGTGGTCTCTTCTACTGATTTAGTTCCCC
TGACGCTCCTTCGCAAGCTGTTTATTAAATTTCCACCAATGAGATTGCCG
CATTTCAGATGGCCCTTCTTTTTAGCACCAATGGCCTCTCAGTGCTTTGC
ACGACGGGCGGCTGTAGAATCTCACCCTTCATATATTTGTTTCAATCTGT
GATCCTAAAAAGGATTGGGTTTTTTCTCATCTTCAATTTACTGAAGAAAG
CAGGAATTAGATGCAAGAGTTCCATTGTCAACAAAATGCCGTAGAAAATC
ATTGAATAAAAGAAGAACTTTAAATCTTAAATATTTTCATTTTGAAGAAG
TGGTGCAAAAAATTGAAACATGGAAAAGTTTCATTTTTTATTGGTTCAAT
CGAAATAAGGGATTTGGAGAACTCTCTGTGCTAGGTTTTTTGCACAAACC
CCTGTAACTATGGGAAAGCACACTGTTGCTAAGATATTGGCTCAAAATCG
AAAGTGAAACCACTGAAAGTGAAAGTGAAATCAGCCCACACTCCAAATCC
CGTAATCTTGATATAGGAGTTTTTAAGCATAGACTGATGGGGTATTGGCT
GGGAACTCCTGGTGTCATCAAGTGATGTTTTTATTTTCCCCTGTTAGGAA
TCTTGGAATCAGATATATTGCGAGTTGTATATAGATGATTTATCTACCAA
ACTCGAGATATTGAGCTTCAGAAAGTACAAAAAATGGACAAAATAGCTGT
TTCTGGCTGAGAAACACTATTTTTAAGGGACAATATTTTTAGTTAGGTAC
TGAAACGACCTGTACCCGCAAAAAAAGGTGCTGTGGTATAGTGGTCATTG
ACCTTGGTTGCTACACAGGCGACTGAGGTTCAATTCCCACTCGCAGCGGT
TCAATTGACAAGTGAATGGACCTTCGCCCGGATCACCAAAGTGTCCAAAA
AGCAATTATTATTTTGATTCCCCTACCCCTTAGCTTTCCAAAAATGTATA
ACAAATGCTTTGACTAAAAAAGTCACACAACCTCAAAAACTCAAACAAAT
TTCCCCCTACTAATATGCCGGCAATCACCTTTTTTTCGTAAATTTGTAAT
AATTTTTCATTTGACTTAGAGCTTGAACAATTCACTGTCGAAGCCAACTG
TTAAAACAAGTCCTGACTGGCTGAATTTGCCAATTTTTTCCTGAATTTGC
CAATTTTTTCCTGAATTTCTAACCTGATTTTTATCTGATTGGTTCAGGTA
GGACACTGCAAGAGCTTCATTTGTGTGAAAACCATGCAGGTAACGCATTT
TTTATGGGAAATAAGTGGCTTCACATCTAGGAGTTTCAAATCTAGGCCAT
TTAAGGCTTTGAAATCAGTGGTTTGAAAGATAAGTGAATCAGGCTCAAAG
TATGCTTATTAAATTTGCTTAGATTGAAATCTTTGACTAAGTTTTCAAGT
TTAAAATTTTCAAGCTATGTTAAGACAGGTTAAGAAAGAAATTTTGTCAA
GTTTTTTTTTGTCAGATTTTGTCAAAATAAATTGTAAAGGAAATTGGCTT
GATTTCAGAATCCATAGGTAATCAATTAAGACAATCCTAAAATCTTGAGT
ATAGATTGATCGTAGATTTTTTTTCATTGGCTGTCGATTGTGATCAATCG
AGCATCTTTAAAGTCAATCGATTAAAAATCGATCAATCTATAGCCAATTG
AGCTTCCCTTAAAATATTGATTTATCAATTTATTATCAAAATCAATTGAT
ATCCAATCTGTCGATTACCAAGCGGTAACTCTGATCACGATATCACGCAA
ATAAGCAAAAAAATGGACAATCGCACATCTCTTTGAAAAATTCCAAATCT
TATAGCACGGCTCAAAAATTTTTCAAATCACAATCACATTTTGACCTCTA
ATCACGCAAACACGAAGAAAAAATTTCCAAATCACGTAAATAATCACGCT
GCAAAAAAGTCCCTATGACATCATCACAAAAACTGCTTCGGGGCCTCATT
ACCTATTTATCGATTGGTCATGGATTGGAAAAAAGTTATTGATTGTATCG
AATAGGAGAGTCTGGCATGTTGGATTGGGGCTTCGTGGTATTGTTGGTAT
AGTTGTCATTGACCTTGGTTTCTACACAGGCAACTGAGGTTTTGATTCTC
ACTTGCAGGGGTCTTTGTCCTGGTCAACCCAAATGAATGAGAGGGAAAGA
ACAACAATAACCGAGGCTACCCTCGCATCCAATGGAAAGTGAAGTAAATG
AGATTTGTGCTGGAGTTTTTAATTATCCAACTTGATCTTGCGTCTAGCAA
AAGATCTATTGAATTCAATCAATCAACATTTTGACACTAAAGTATAATTG
AACATTGAAAATTTTGAATCTCTGTACCGTAAATCCTCGAATAAGCGCCC
TGGTGCTTATTTAATTTTTCAGGCTCTAAGGGGGGCGCTTATTCGAGCGG
CGCTCTTATTTTTTTATTTCAGAAATTCGTATATCAACAAATTCGGAATC
TGCTTAAACTTAACTGTTTCAAAGGGTTGATTTTTCAAAAAAGGAAGAAT
AAAAGAAAAATTGGAAAAATCCAATTGACAATGTCTATCATTTTATTCTT
AATCGCTTTCTTTCTTTTTAAGAAACAAGTATCTACTCAATATCATATTC
AATCAACAACAATATTCGAATAAGCGTCCCTCCCTGGAGGGGGGCGCTTA
TTCAAATGGGGCGCTTATAATATTATTTTAACTAAAAGGGGGCACTTATT
CGAGCGGGGCGCTTATTCGAGCAGGCGCTTATTCGAGGATTTACAGTACA
GAATTTACCTACCTCTCTACCAGGTATAAATCTTTTAATATTTTTGTAAA
TAGTAAAAGATATTTATTTATGTAACTTGGCCACACTGGGACAGGTCATT
TTTACGTGACAATAAAGATGTTTTCTAGTCCCGTTCTATTTATTGCATTC
TATTAATGGTGAGGGTGTGTGGTAACTTGGGCATAACTAGGTGTCATATG
TGTGCTGATGCTAAAATTTTGTTTTTGACCTTCCCAAGTCTCTGAATCAT
TTAAGGTACGAAAAACTTGAAAAGTCGAAAATGAAAATGTGCTCTTTTTT
TGCCTTGTCTCTCTAAGGGTAGCTTTATTCTCTATTATGGGCAGTTTTCT
CAGGTCCGACCTGATATTCTCCAACCCTAGTACTCCCCAGTCGTTTAAGG
GCTCTGATCATAGTCGAAAAATTGATTTTAGTATTTGAACATAAAAGTTA
TGTTTTGGGTTTTTTAACACTTTTAACAAAGACTTGCCTTTATAAATTGC
TTTCAAATCAAATCCCTTAAGAGTAATTAAGAATTTAATTGCGAAAATGA
AAATATGCATTACCTTCTTTTATAAAAAGTTTTAATGGGTAATAAATTAA
TACATCAAAAGTTATAGATGTTTTTCTATGAAAAATTGGGATGAAAAATT
GGTCAAAAAGCACTATTTTCAAGATTTTGAGACAAGTAAGCTTTTAGAAA
AATTTTCCAAAAATCTATCTACCGCAAAAAAATTTCCAAATTGTTTTTTC
TTCGTCGAAAATAAGCTCTTCAAAGTTGCAATACTCTTCTTCGCAAAAGT
CTGAATTTTCTTCTTCATCAAATTTTTCCATTGCAATTCTTAAATCTACT
CAAGGATAATTGGATTATCAAAAAATGTAAAACATGCCATAGTTTTGTTG
GTTACATCAGGCAGAAAACTATATTTTATACATGGCAAATATTAAGAAGT
CACAATGTTCAGAGCCCCTAATAATGATTATTGGACCTACCCCGGTGGGG
TGGAGGTCCTATAAATTAACCCATGTTCGTTAGTTAGTTAGTTACAGCTT
TTCTCGAGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACAAAGGTGCA
TGACCATAAACCCTCAAATGTGACGGAGCCCGATTTTCGAAAAAAAAAAT
TGGGGGGCAAATTTGGGCCAAAAAACGGCTTAAAAACAGGTTTTTTGGAG
TTTGTGAAAAATTGGATCATTAATTTTTTCTGATTTTTAGCATGAAAGTA
GGGTACAATCATAGTTAAAAGATGGCTCAAGCAGATTTTTGCAAAAAAAT
ATTTTTGGCTCAAAAATCACATTTTTATCTATAAGAACCACTTTTAATAA
GAATACATCAATGTTCTTAGCCATGTTGTTATTATTATTTTTATTAGTTT
TTTTTTAACATGAAAATGTCACGGTGCAGGGTAATGATTTGAGTTTTCTA
GAAACACTTATTATTTTTTTGGCTGAAAAACGAATCTTTATCTATAAGAA
TCACTAATTATAGGCATAGATCAATGTTCTTAGCCAAATTATTATTTTAT
TATTATTTTTTCTAAACAATGAAAATGTTACCTTAGAGCGCGATGGTTTG
AGTTTTCTGTAATCACTTATTATTTTTTTGGCTGAAAAACGAATCTTTAT
CTATAAGAATCACTAATTATAGGCATAGATCAATGTTCTTAGCCAAATTA
TTATTTTGTTATTATTTTTTCTAAACAATTAAAATGTCACCTTAGAGCTC
GATGGTTTGAGTTTTCTGTAAACACTAATTATTTTTTTGGCTGAAAAACG
AATCTTTATCTATAAGAATCACTAATTATAGGCATAGATCAATGTTCTTA
GCCAAATTAACCAGTTATGTCTTACGTGTTTCATTGTTTCAATGTTCACT
GATTAGTTTGATAAGCCAGGTAGGTCCATAAAAGTATCGCTTGTTTCATC
TATGAATAATCGAGCACTATGCGAAATTTTCGACTCTGAGTCGTCTTGTT
TCTTTTGATTTAAAAAAATTGGCTTGAAAATGATATTTGACTTGACCTAA
CTTGACAGGAATTTTTCCTGAGATATTTTAAAGGGTGGTATGGTACAGAG
TGCTGTGATATATTTTTTAATACAGTGTTGTAAATTTTTTTAGAAAATTT
AAAGGAAGTGTACCAGAAAGTACCAGAAACCAAAAAGTAAATTACTAAGA
ATTAAAGGGTGGTATACCTATTTTGAGGGGGGGAATCAACTTAGTACAGG
GTACTTAACGGTGGTGTGTCATTTCTCAATGGTGATATAAAGATTGTACT
GGGTACTACGGGGTGGTATACCTATTTTAAGGGGTAAATTCAACTTAGTA
CCAGGGTACAAAGTGGTGGTGGTCTCAGATAAATTTCAAAAAACAAGAAA
GTACAACTTTTCAGCACTGGTCCAGTACCACAACTTGGTACCTCCTGCCC
TAATTTTCATTTTGTGCGAGTCCTTTCACTTTTACTTTATTTTATTTTAA
TAGACCTTTTAAAAAATTCATGAAAGGACGAAAAGAAAGTGAGGTTTTAG
GTTTAGTCACTGCGTACGAGTGCCTATAAGAGGGCCTTCAGCCCTAAATT
GTGACTCTCGAGTCCAACCCTGACCCAAACTGGTAGTATCCTAATACCCC
CTGAGAAATAATGACAAAGAACGAGAAAAAACGACAATTAAACAACAATT
AAGAACAACATATTTAGCCATCCCAAGCCCCAACCTTATTAGTGCTTGTA
CTTTATGTCGTTTAACCACTAACAGCGCATTATATGTGCTGAAATTGGAG
CATCCACTATATGGTTGCTACCCTCAGAAAATCTTTAATTAAGCTGTTGC
AGGATAATTCTGATCAAAGATTTAAAAAAACATGCTTAACAAAAAACTGG
TCAAATATTTTGGGAACGCATGAAATTTACTTAAATTTGCAGAAAAAAAA
CAAATTTTGGTTGGAAGTGGATTTCGTAGATCTTTGGTAAATCTGCCAAA
TCTGCAAAAGAAAATCTGAAAATTTTCAATTTTGCTGACAATAATTTATT
TGGTTTGATTACGTTTAATACGTGTAATTCTACTGTCAGGGTTGCCACGT
CTGCCGAAAATGTCTGGAATTTAGCAAAAGTCTGGAAATGTCTGGAATTT
AGCAAAAGTCTGGAAATGTCTGGAAAGTCTGGAAAAAGTCTGGAAATATA
GCATACATGTCTGGAAAAAGCCTGGAAATAGAGAAATATTTCTCTTTTAT
TCGCTTTATCCATCCATTCTTGAAATGTTCAGTGTGAACCCGTGTGAACA
CCCTCATACTGGGAATAACCTGTACTGTTTTCACTGTTAACTTTATTATC
TTTGTTAAAGACAACCTTAGAATTTTGGTTTTTGCACGTTTTTTTACTTG
TANTGTTAACTTTATTATCTTTGTTAAAGACAACCTTAGAATTTTGGTTT
TTGCACGTTTTTCTACTTGTATATATTTTGTCACTTATAAAAAAGTCTGG
AAAATATTGGTGTTTTTTACCTAAAGTCTGGAAAAATTTGGCGATTTTAA
AAAATTGAGGTTTTTGGGCAAAAGTCTGGAATTTTGAAAGTTGCCTACCC
ATGGCAACCCTGACTGTAGAATCACTGTGAGAAGTGTGTCTGATTATAAA
AAGAGACCAATTTCTTCCCGTCCTTCTCCCCTTAACTTTTCAGAATACCA
TCCCTTTTGTTGGTCTCTGTTAGTAGGGAAATAATTTCTGATTAATATTT
CTTTTTGTAGTTAATCTCTTCAAGCCAGTTGCAAGTAAAGGGAAAAATAT
TCGACGCACAAACTCATTGGAAACACTATCAAGCTCGTACATCAATGGAC
AATGGCCTCGTGAAAGTGGTTCAGCACAACAACAGGTCAGCATTGGTTCT
GGGATTTGCAGATCAACACAGGTTGGTAATTCATAATGAGCCCCATCTTT
CTTTCATTATGATGCCAAGGGAAAATGACATAGCGTCAGCAATTACTCAA
ATTGAAGCTTATGAATCTGAAAAATAATTTTATAGAAAGTGTGCAAAATA
TTTTATCTTAAACTTAGAACTGAACGCAATTTACATTGGGAAACCCTTTT
TTACTGGATCAATTTTTTGAAAGTGTCTAGGGTCAAAAATCCTGGGGGCT
AACAAAAAATTCGTAAATCTTTGGGTGGACTTAAAACTCACGGGGGACCT
AATTTTTACCTGGGACCTAAACCCAGGCTGACGCTATGAATGAATGCCAT
TTCACTTTTGTATGTTGAACTTTGAGTATCGATAGTATCATCTTTAAGAA
GATGAAATAAAACACCCTGGTACTGCCTGGTAAAATTTTATTTCCAAACA
TGAAATCCGAAAAACTGAAATAAAGAAATGTTATCCGCCTCTTTCTCCAG
ACACAATGGGACTCTGACTCAGAAGAAAACCCTTTGCCACCTACCACTTA
TGAACATAGAAAACCACAAACAATAAATGGCAGTTCAAAGGAGGTATGAT
GATGAAGATTGATTCTCAAAGTTCTCTTACCATTTCATTTTTAGAGAGTA
ACTATTAATTCGGGTGGTTTTTAGATAATCAGGTTTTAAAATCCTTCTAT
AACGATCCTATATATAAGCAAAATCTATGTATTTTGTCTGAATATCTTCC
AAATTTTAGAAATTTGAATTACAAGGTCTCTAACTTCATAACCATCACAT
AGGTTAATAGAAACAAAACAAGAAATTCAGTTTATTCATAGTTCTGAAAC
AATTTCTTTTAGGTTTTCAAGCAACACCTTCAACGCAGTAAACAACAATC
ATCAACTCATATACAACATGGTAAACAGTCACCTTTGCAAGGTGACCACT
CAACATTTAGTCAATACTATCCTACAGCATATTCTCAATCTAAACCTGTT
CCCATACCACAAATTCCATCCAGTCCCAAGAATCCAATGCATACACGCAA
GAGTGTGGAAGGCTTGAATATTGAACTTGCTGGTCTGGAATTGGAAGACA
AAGTTGCTGATCAGGTGAGTCAAATTCCTGCCTTCTTTATTTATTTATCA
AATTCTACTTGTTTATGCTACATTAAGCTGCATTAAGGCTAACTAATTTG
GACGAAAACTGATTTTGAAGAGGGGAAAAAATCGTAAAAAAGATTAATTT
TAAGGAGGCTTGAATTATCTTAATTTAGACGAGAACTAAACTAATTTACA
GCGTATTATCAATAAAATTTGTTGTTTAGTGTATTTGTATTGGACAGGGG
TTGTTAGGGTCAAAATTCAAGTTTGCTGCTTGTGTATCAAAAACTGATTG
CTTAGAAAAATAACTTGAAAAAAAAAACTAACAACTTTTGTATTTTAATT
TCAGGTATTTGCGCGTACACCTCCTGACGGCCACAGACCACCTGTCCCAG
GTCAATACACACCCAAATCAGATGTCAAAAATGTTGATACTCAGACTGTC
AATAGTTGGATGGATGTTCTAGCTAGCTTATCACCAAATAACACAAGAGA
CAAACGTAGTAGCTCAATTTCTTCAATTTCACCCGGCTTTGCCATTTCGC
CGGCACCGACAGACAATAATACCCTCTCACCCAATCATGATTCTTCGAAT
AACACATCTCCGACCAAACCAGTATCTTCCTTGAACCTTGAACCACAAAC
AGAAGATGTTTCACATGTTCCAAAATATGCTTCTTCGCCGAAACCCAACA
ACTCTTTCATGTTCGCACGTGGACCGCCTGATGGAGCTGAAAAAGTTCCT
CTCAGTTTGGACGAGATCGAAAGGTTAGTACTTTCAACCTTTCTTGAGTT
TGTTTAAAGTGTCTAGATATAAGGGACCAAACGACCTTGACCAGGGAGGG
ACCTTGTGTAATAGTCTTTTGGAAACGTGAAAATTATCAATTATGGATTC
GTGTTATAGTCTTATAGTCCCCCTGATGCCTTGAAGTTTACTTTCCCAGT
GGTAAGGGGGTGAAACTATAGGTGTGTATTATCATAACAGTTTTTCATAA
CTTTGACTAGGATTGAGTAGTGATCACTAATATATTTTTTCAATTTTTCT
AATTTTCAGTGACGCCAAGGAGGAGAATCGAAACTCGTGCCCGGACAAAT
CCAAAATGAACTTTCAGTGTAGTACCAATTCTGCATTTTCTGAAATTTTG
ATTCAACGATGTGCTAAGAAGGTTTCTTGAGATTTCGTCCAACTTGTATT
AGTGTGGATTATGAAACGAGTGGATATTCTTGAAATGCGTAAGTCATTTT
TCTAGCGGAAACACCCTAAAAAAGCCGGGATTTGACCTCTCTCTGTTACT
AAAAATAGAAACACGGAGCTCAAAAACCGGCTTTTTTGGGTGCTTCTGTT
AAAAAATATGACGTCATCTTGACTTGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002848XLOC_002848Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005024-exon-sc0000050-1575043694:48789..49173TCONS_00005024-exon-sc0000050-1575043694:48789..49173Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1575043694:34239..34363TCONS_00005024-exon-sc0000050-1575043694:34239..34363Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1575043694:33631..33723TCONS_00005024-exon-sc0000050-1575043694:33631..33723Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1575043694:33110..33361TCONS_00005024-exon-sc0000050-1575043694:33110..33361Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1575043694:32351..32769TCONS_00005024-exon-sc0000050-1575043694:32351..32769Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1575043694:31745..32064TCONS_00005024-exon-sc0000050-1575043694:31745..32064Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1510915933:48789..49173TCONS_00005024-exon-sc0000050-1510915933:48789..49173Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1510915933:34239..34363TCONS_00005024-exon-sc0000050-1510915933:34239..34363Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1510915933:33631..33723TCONS_00005024-exon-sc0000050-1510915933:33631..33723Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1510915933:33110..33361TCONS_00005024-exon-sc0000050-1510915933:33110..33361Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1510915933:32351..32769TCONS_00005024-exon-sc0000050-1510915933:32351..32769Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1510915933:31745..32064TCONS_00005024-exon-sc0000050-1510915933:31745..32064Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1491911889:48789..49173TCONS_00005024-exon-sc0000050-1491911889:48789..49173Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1491911889:34239..34363TCONS_00005024-exon-sc0000050-1491911889:34239..34363Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1491911889:33631..33723TCONS_00005024-exon-sc0000050-1491911889:33631..33723Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1491911889:33110..33361TCONS_00005024-exon-sc0000050-1491911889:33110..33361Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1491911889:32351..32769TCONS_00005024-exon-sc0000050-1491911889:32351..32769Clytia hemisphaericaexon
TCONS_00005024-exon-sc0000050-1491911889:31745..32064TCONS_00005024-exon-sc0000050-1491911889:31745..32064Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:31745..49173 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.75818	2.82493	1.60591	0.515216	10.9791	12.5597	12.0797	12.0708	9.54201	7.56216	10.4337	6.11764	4.90937	1.93326	5.0169	4.71995	5.54938	7.20907	2.86706	1.59582	3.2968	2.42855	2.94861	9.63189	8.32126	20.213	2.77859	3.42869	4.02641	4.51146
Blast
[Close]
BLAST of TCONS_00005024 vs. Swiss-Prot (Human)
Match: F117B (Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.286e-27
Identity = 107/332 (32.23%), Postives = 151/332 (45.48%), Query Frame = 1 
Query:  433 TNSLETLSSSYINGQWPRESGSAQQQTQWDSDSEENPLPPTTYEHRKPQTINGSS--------KEV--FKQHLQRSKQQSSTHIQHGKQSPLQGDHSTFSQYYPTAYSQSKPVP----IPQIPSSPKNPMHTRKSVEGLN--IELAGLELEDKVADQVFARTPPDGHRPPVPGQYTPKSDVKNVDTQTVNSWMDVLASLSPNNTRDKRXXXXXX----XXPGFAISPAPTDNNTLSPNHDSSNNTSPTKPVSSLNLEPQTEDVSHVPKYASSPKPNNSFMFARGPPDGAEKVPLSLDEIESDAKEENRNSCPDKSKMNFQCSTNSAFSEILI 1368
            T+SL+TL++ Y+ G WPR+S         D  ++        Y  +K  +   S+        KE+   +Q LQRSK  S  H    +QSP  G+H+  +Q          PVP    IP IP +       R SVEGLN  IE+   E  +K  +Q+  +  PDGHR P P      S  +++DTQT        A    NN+   +S S +S     + G   SP   D+  + P    + N SP                  +PKYA+SPKPNNS+MF R PP+G E+V +  +       E     CPDK+K+NF   + SAF  + I
Sbjct:  218 TSSLDTLAAPYLAGHWPRDSHGQAAPCMRDKATQTESAWAEEYSEKKKGSHKRSASWGSTDQLKEIAKLRQQLQRSKHSSRHHRDKERQSPFHGNHAAINQCQ-------APVPKSALIPVIPITKSTGSRFRNSVEGLNQEIEIIIKETGEK-EEQLIPQDIPDGHRAPPP-LVQRSSSTRSIDTQTPGG-----ADRGSNNSSRSQSVSPTSFLTISNEGSEESPCSADDLLVDPRDKENGNNSP------------------LPKYATSPKPNNSYMFKREPPEGCERVKVFEECSPKQLHEIPAFYCPDKNKVNFIPKSGSAFCLVSI 517
The following BLAST results are available for this feature:
BLAST of TCONS_00005024 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
F117B4.286e-2732.23Protein FAM117B OS=Homo sapiens GN=FAM117B PE=1 SV... [more]
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