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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005017 ID=TCONS_00005017|Name=TCONS_00005017|organism=Clytia hemisphaerica|type=transcript|length=270bp
CCCTGAAGTGCAGAGTTTCCACATCACCATTCGACGATGTTTGGCGAATC
ACAATTTCCCTCAATTATGTACAGATGCAAAGTCTGAACGAGTTGGACTT
CTCAACATTCTCAAGAAGAGCTGCAAGGTGCTCAATGATCGTTTCAAGGG
ACAATCTTCCCCGTTGACGTTCCACGATGAGCATCTTGCAGACTTGTTGA
GGAAAGGCGTCATCAAACCTGAAGAGCAGAGTGAAGAAACAGCTTACTCA
ACAACTTATAAAGGACAGGG Run BLAST on NCBI transcript from alignment at sc0000050:807160..808294+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005017 ID=TCONS_00005017|Name=TCONS_00005017|organism=Clytia hemisphaerica|type=transcript|length=1135bp|location=Sequence derived from alignment at sc0000050:807160..808294+ (Clytia hemisphaerica)
CCCTGAAGTGCAGAGTTTCCACATCACCATTCGACGATGTTTGGCGAATC
ACAATTTCCCTCAATTATGTACAGATGCAAAGTCTGAACGAGTTGGACTT
CTCAACATTCTCAAGAAGAGCTGCAAGGTGCTCAATGGTAAGTAAAAGGG
TTTAATCTAAGCTGTGGTGTATGAAGAACTTTGTTTTATAAAGTCAGAAA
TCGATTNTAAGGTGCTCAATGGTAAGTAAAACGGTGTAATCGTTTAAGCT
CGTGTGGtgtataaagaactttttataaaGTCAGAAATCGATTCATGTTC
AAGTCACGGACACGAGTCTTCGTTAATCAGGTTATGCTGTGTTTTCTTCA
CTAAAAAAGTAAGATTAACCCATCAGAGCCATAGGGTTTACCAATACatc
tcattttttcaaaaacaattattttattGGCTTAGTGATTTAGTGTTGCC
TACACCCCCGCCTACACCTAGGCtgtacaaaactttttggaaggTTTGCC
ACACCAGTGCTCCAAATTGCCTGAAGCAGCTTGAAGAACAGTTTTAAATA
ATATCTATAACATGGTAAGGAGTGGTCATCGTTCTTGACTTCCGTGCTgg
aggtcagggttcgattcccactcggtgctgcaattcacttggcaagtgaa
tgtaccttggcccgtgtcaacccataccatgtgaggggaatagggtacca
tcactctgataccagtatggggagatatgctggacattgaatgtggtgtg
gtgatggtactcatatgttcagtacctgaaagaacgcaaggttctcccgt
actgttcgagtatcatcatcgatacagcacgattctgatgtgtcgcgagc
acagagtacaatgtctggtaagcgctgtgatttccctatctaggggtagg
aaactatcccgggatagggcccggtccgatgatatcggagggtTAGATTC
TCTCTTCTCTCTATAACAtggtaaaattaatttttgttttgcgGAACTTC
AGATCGTTTCAAGGGACAATCTTCCCCGTTGACGTTCCACGATGAGCATC
TTGCAGACTTGTTGAGGAAAGGCGTCATCAAACCTGAAGAGCAGAGTGAA
GAAACAGCTTACTCAACAACTTATAAAGGACAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005017-exon-sc0000050-1491911889:807160..807296 | TCONS_00005017-exon-sc0000050-1491911889:807160..807296 | Clytia hemisphaerica | exon |
| TCONS_00005017-exon-sc0000050-1510915933:807160..807296 | TCONS_00005017-exon-sc0000050-1510915933:807160..807296 | Clytia hemisphaerica | exon |
| TCONS_00005017-exon-sc0000050-1575043694:807160..807296 | TCONS_00005017-exon-sc0000050-1575043694:807160..807296 | Clytia hemisphaerica | exon |
| TCONS_00005017-exon-sc0000050-1491911889:808162..808294 | TCONS_00005017-exon-sc0000050-1491911889:808162..808294 | Clytia hemisphaerica | exon |
| TCONS_00005017-exon-sc0000050-1510915933:808162..808294 | TCONS_00005017-exon-sc0000050-1510915933:808162..808294 | Clytia hemisphaerica | exon |
| TCONS_00005017-exon-sc0000050-1575043694:808162..808294 | TCONS_00005017-exon-sc0000050-1575043694:808162..808294 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050 | supercontig | sc0000050:807160..808294 + |
Blast
The following BLAST results are available for this feature:
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