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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005014 ID=TCONS_00005014|Name=TCONS_00005014|organism=Clytia hemisphaerica|type=transcript|length=273bp
CTCAGCTATGAAATAATTCACTAAAGTCATTGCTGACTCTTCTGTTTTAT
CTGTTTGGTGAGATATTTTCACTACAATTATAAAAATAACCACAGTCAAA
GGTAGAGTGCACATTACGTATACCAGATTTATAATCAAAAGCCGGTTTGA
cgcttttttatgcttttcgAAAACCAGACTCTCGTGAACTAGTCTTGAGG
TCCTTAAGGTCCAAATTAGAACCACATTTAAGACGACACTTAAAAGCATA
CACAAGGCAATCATGGATCCATA Run BLAST on NCBI transcript from alignment at sc0000050:763148..764938+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005014 ID=TCONS_00005014|Name=TCONS_00005014|organism=Clytia hemisphaerica|type=transcript|length=1791bp|location=Sequence derived from alignment at sc0000050:763148..764938+ (Clytia hemisphaerica)
CTCAGCTATGAAATAATTCACTAAAGTCATTGCTGACTCTTCTGTTTTAT
CTGTTTGGTGAGATATTTTCACTACAATTATAAAAATAACCACAGTCAAA
GGTAGAGTGCACATTACGTATACCAGATTTATAATCAAAAGCCGGTTTGA
cgcttttttatgcttttcgAAAACCAGACTCTCGTGAACTAGTCTTGAGG
TCCTTAAGGTCCAAATTAGAACCACATTTAAGACGACACTTAAAAGCATA
CATGATGCAACCATGGATCCATAAGTGGAGAAGTAAGCTTGATAATTAGC
TTCACCAATAGAGAAGCTAACCAGGTAACACAATTTTGTCATCAATGCTG
CAATAAATATCTGAATGAACCAAGTCGTGTAGATTGTCTTTTCTTGTATC
TGTTTTAATGGATATTTAATTGCAATAAATCGCACAATACAAATACATAG
TAGATTACcgaaatcgaaaaaatatgATGAAATTCAAGGCAGTGTCCTTA
ATCGATTCCTGCAGACATTCATCAGAAAATGGTAGAAGTTTCcaaatatt
atcaaataaataaatcaagcCACAAGCCACTCCACAAATGCAAgtcaaca
aaaacattttcttatgGATTGAGAATTTCAAGTTTGTTTTATATATGCCG
TAAAACATCACAGAGTTGGAAACCAATAAGAAAACTGATAGGATAAAGTT
AAGCCAATTTTCGTGTGCATAGTGTCTATCCAAGAAGTCTTTGAACTGTT
GTCCCCAAGATGTGTTGCTATCTGGATGGAAATCAAAAAAAGCTGAAATG
ACATTTTGTGACAAACACTTCATTCTTACTTCTGGTCACTCCAGTATGGA
GCTTTGGCCAGTCTATGAGGCCAGAACCAACAATCCAGGGGCTCCTTGTT
CGAATCCCCACTCCTTCCTGTTCAGTTCATATATAACCCCGTGAAAAAAT
CAAGAGACTCTCTAAAAATACTAGTTTACTTGTCTATTCACGTAAAATAT
CAAATATTCGCCGCCTATATGGCTCTTCATCTTTCAAAATAATATATGTT
TATATctatcttttttgaaatatttattcaccTATGGGTACTactcataa
aaaatataaacaatttgaaatgaactgtaaacaaaaattaattttatcgG
AGCCCCATGTTCATGTGAAAATTGTAACCTGTTGGCTCTAtgtttttcca
atgtaaataCAGCCTTATCAAATAAACACTAAGGTACACTAAGCAAACTC
TTTATTGTCACGAGATCACacaaaaaaatgataacaatAAAAAGAGTAGA
AAGCAATAGATCATGAAATTTGAATAGGAAAAATTCCTGGCTCAAGGTAA
TATACTATAGAAATAAGAAGCAAAATTTACTTGTGTTTTACTTTATTTCT
TCGTTGGACAACAAAAACGTTGGTAACAGATCTCATAAAAAGCCACAATC
TTCTGATCGAATCTAACATATATAACAGCATTCAGTCCACTGTACAAGAC
ATAAACATTAAAACACCATGACTCAGCTATGAAATAGTTCACTAAAGTCA
TTGCTGACTCTGTTTTGTCTGTTTGGTGAGATATTTTCACTACAATTATA
AAAATAACCACAGTCAAAGGTAGAGTGCACATTACGTATACCAGATTTAT
AATCAAAAGCCGGTTTGAcgcttttttatgcttttcgAAAACGAGACTGT
CGTGAACTAGTCTTGAGGTCCTTAAGGTCCAAATTAGAACCAAATTTAAG
ACGACACTTATTAGTATACACAAGGCAATCATGGATCCATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005014-exon-sc0000050-1491911889:763148..763398 | TCONS_00005014-exon-sc0000050-1491911889:763148..763398 | Clytia hemisphaerica | exon |
| TCONS_00005014-exon-sc0000050-1510915933:763148..763398 | TCONS_00005014-exon-sc0000050-1510915933:763148..763398 | Clytia hemisphaerica | exon |
| TCONS_00005014-exon-sc0000050-1575043694:763148..763398 | TCONS_00005014-exon-sc0000050-1575043694:763148..763398 | Clytia hemisphaerica | exon |
| TCONS_00005014-exon-sc0000050-1491911889:764917..764938 | TCONS_00005014-exon-sc0000050-1491911889:764917..764938 | Clytia hemisphaerica | exon |
| TCONS_00005014-exon-sc0000050-1510915933:764917..764938 | TCONS_00005014-exon-sc0000050-1510915933:764917..764938 | Clytia hemisphaerica | exon |
| TCONS_00005014-exon-sc0000050-1575043694:764917..764938 | TCONS_00005014-exon-sc0000050-1575043694:764917..764938 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000050 | supercontig | sc0000050:763148..764938 + |
Blast
The following BLAST results are available for this feature:
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