TCONS_00004991 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00004991
Unique Name	TCONS_00004991
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	793

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000050:259606..268303+
coding sequence from alignment at sc0000050:259606..268303+

transcript sequence

>TCONS_00004991 ID=TCONS_00004991|Name=TCONS_00004991|organism=Clytia hemisphaerica|type=transcript|length=793bp
TTTTTAACTCCACGAAATGATTCCTTATTATTCTAATAGGAAAAGGCTGG
TTTACATGAAATTCACTATCTAAACATGTTTCAGGCACGTTAAAGTTAAA
AACAGCATGATACGGTCACCAAAATATATCTCATCAATTGTATCACGATC
AATTCGTTTGTTGGTTGCAAGAAATCTTTCGTCATCAGTTACAAGaATGA
GTTATCCGAGCAAAGAGGAGATATCCAATGCAGTTCAAGAGTCCCACTCA
TCAACAAAACAGTTCGTCTTAACAGAGACTGCTATACGTATATCTAAACC
TTTGGAAACGATCAAATTTTACACTGGAGTACTTGGAATGACTCTATTGC
TGACAAGAGATGACGAGACAACAAGGTCTTCATATTACGTCTTCACTTTT
GTGGATAAAAATCTGATACCGCAGAACGATGAAAAAGCATTTCATAAATG
GCGATTGGGAAGATCTGGAAACTTAGAGATGGCTTATTCATGGGATTCGA
TTGAACATCCGACGAAATACCAATGCGGTAAACTCAATCCGGACAGCTTT
GGACATTTTGGTATCTGTGTTCCTGATTACGAAGCTGCTATGAAACGATT
CCGAGAGCTTGGATGTCAAGTTGTTGAAAATCCAGCCGACACATCACTCT
CATATATCCTTGATCCAGATGGATACAAAGTGGAAATATTTGAATGTCAT
TGGTCATAATTTCCCTTCGACGCGATGTACTATTCATGAGTGGAATATCA
AAACTCCATATCCAAAAATTTGAACAGTTATTTCTTTCTGACC

Run BLAST on NCBI

protein sequence of TCONS_00004991-protein

>TCONS_00004991-protein ID=TCONS_00004991-protein|Name=TCONS_00004991-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MIRSPKYISSIVSRSIRLLVARNLSSSVTRMSYPSKEEISNAVQESHSST
KQFVLTETAIRISKPLETIKFYTGVLGMTLLLTRDDETTRSSYYVFTFVD
KNLIPQNDEKAFHKWRLGRSGNLEMAYSWDSIEHPTKYQCGKLNPDSFGH
FGICVPDYEAAMKRFRELGCQVVENPADTSLSYILDPDGYKVEIFECHWS

Run BLAST on NCBI

transcript from alignment at sc0000050:259606..268303+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00004991 ID=TCONS_00004991|Name=TCONS_00004991|organism=Clytia hemisphaerica|type=transcript|length=8698bp|location=Sequence derived from alignment at sc0000050:259606..268303+ (Clytia hemisphaerica)
TTTTTAACTCCACGAAATGATTCCTTATTATTCTAATAGGAAAAGGCTGG
TTTACATGAAATTCACTATCTAAACATGTTTCAGGCACGTTAAAGTTAAA
AACAGCATGATACGGTCACCAAAATATATCTCATCAATTGTATCACGATC
AATTCGTTTGTTGGTTGCAAGAAATCTTTCGTCATCAGTTACAAGGTGAA
TGCTTCTACCatcgttttgcataagattctCATTCTTGCACTAAGATTTT
AGTCACTTTTTCCGGAtttttccgctatttttcccgggATAGCTGGTATG
AGATTGGAGAGTGTTTTATTCATTCAAATGTACAGAAAATCTTGCGTTCA
CTTCGTTcgaaactgcctaactttccgaagctcatTTCTCAACTACCCAG
AATTCTTGTCTTATTTTCcgatggaaaaaaaaaacatatgaaTCTTAGTG
CAGGAACAGGAATCTTATACCGGGAAAAGCACAGGCCGATATCATACCTG
TGtggaccaatccagattctattcatcgcgcaatcaacgcagagaaaagt
aaccatgacgaacatccaagatcttggatgaagttcaaagttgatatttt
taatcccgtcgttgaaaacacaactcaaaaatggcatcaatgctttttaa
aaagagtcagtgatagagaatcataacataaagtctgtttatcatttcga
ttcaattaaagtaacATCTcaataattaatagtttagtattGTAATTACT
gtttatacatttgggaatcatgtaaaagatttcttttgagagaaactcat
ttcaattacacttggaggtttctcgggaattcgtaaatagtaaactgcat
actggtACAGtttgctagacattaatatggtactatttgctcttcatctt
tgattctttctactgTGATTACATTGACATTGCGCgatagaatttctatt
attggtcttcagaggctgatatattctttgaaaactcaacctctgatggg
tctgatactcagggtaggaaTTTTATGCAAAACGACGCcaatttctttat
attttcgATAAAAACACCTGTCTCACTTAATCTCCTAACATATTCTGATA
CACCACGCAAGGCACGTTGGCTAAAGCAAAAATTGACTCTTGATAAACGT
CAGTCACAAACATTAAAACCCAGAATgcttctgttttctttttgaaacaa
aaagtgaCGCAGTTTTGATTGCttgtgttgaaaaaaaaaacaaggtgAAA
TCATCACATTTGACACAACCTTTTTAAGGGCGGTTCGGGGTTTGCGCAGA
AAGGATAATTTGTTTTATGATTATATCTTACTTGAAAACTGATAGTTTTC
AATGTtggggggtcaaattaaattgtttaaccatttaagtgccaatgtcg
tatatatcagacatgggctacgTAGGAGGGCATGcactcctgtaatgccc
agtttgagttagaaatcgtcatttttggtttaactcgtaggaattggatt
gggcttcatgctcaagcaaaaaaaatcaaaagtcagTCTTTCCaacgaga
ttttaagccaaaaattcaaaaaaatgcaaaaaagtgGCCAAATgtggccc
tgctttacttgattctgtcctccagcgaattaatttgaagttttaccata
gtataagaaagccgcggctggaatatgtactgcattgtcttttcagctaa
ttgctgttctatctctgtctccgagctttataagaacatcaagattgtca
gtttattattggtagatagtgtttgaaatattttcttattttcattcaca
aaaaatttttttattgctagatatttttgaatctgtacccaatagaaaac
ttgaactgattttagacatattttaggggtattttgtggaaacgatagtt
tttcgccaaaattaaaattataagaaatatattcaagatgacaactttcc
tgtcagtttgaatggtAAATTTtcaaggtgctggcttgaaattttcacag
aattatcttgatgttctatttcattgatttctaaaaagatttcactgaaa
tattgtgaaggcatttcgaggcactttattaatttttgagttctttcagt
cCAGctattttgtgcttgttgaaatttcttattgttgatctttcctgcac
aatgatttcatattgcaagtgtattatcaagggtatatcattaatgtcta
aaacgcagtGAGAaataagtattaacgacaaaccaataaaatttaccatt
taagatgctacattacttatttcttgatcacaaatagtcatcaaatacga
cagagatagaacaacagaaattcagatgttatcattccagccgcggcttt
cttatactatggttttACCATTGtgcatcattctatcattcacTGCTTTA
ATTTCCCTTACCTACTCCCCCCTTAGCCGACGTCGCCCACCCCACCCTTC
CTAAATCGGACGGCGCTGAAAgcgcctaaaagaaagaggagactctaaac
TATCTAACGAGCTACGAacaagcttctaactccttctagatctcgagata
taagccttttaagtttgaactagcgattttctttaaaaaagttagaaaaa
atgactgtggcacttaaagggttaaatgaCTTTTTGCATTTGCCAGTGGT
GAGGatcttttttggaaattcaATGCTAACCTCAAAATATCTTTCAGGGT
AAAAAATATCCATTATGgtttttgcaatgcaatgttggGTTTGATAACAG
AAATTACATCCAGCCTAGGCAACCCACCTAAACAATTACTTAAAATACGT
GATGAAATGATGATATTAGCAATGTAATTATAGTCAATCATGAGTCACTA
TCATAATACGTTTTCACAATCCCTGTGAAATTTTACTCTGCAAACCTCTG
ATTATCAAGCCGAAATAAATATTTAAACCGAAAAAGACAGagaaaataat
tcaatttcTGGGAAATTTGACCACTGACTGGGTTTTGAGTGACCTTTGAT
GACCTTTCAAACAGAGAAAGGATCAATTGCTAAAGTTTGTATCTTATTGG
AATATTCAcaatttttgttgatatttaaaactttttcagaATGAGTTATC
CGAGCAAAGAGGAGATATCCAATGCAGTTCAAGAGTCCCACTCATCAACA
AAACAGTTCGTCTTAACAGAGACTGCTATACGTATATCTAAACCTTTGGA
AACGATCAAATTTTACACTGGAGTACTTGGAATGACGTaagtatgttttt
tttcttctctcagTTTTGTTGATTTCAACAGAATTTTGGTAGACCAATAT
CAAGCGACAATTTACCAACCACGAGGCTATCAATTATATTTGCAGCCAAG
AGGTAGTTTAATTACAATATCAGATTGTCAATCAACTCACCCTTGTGTCA
CAGGACCCGCTGGGACCCTAACCCCACTCGAAATTACggcaaaatttagt
tcccggtgggaaaaatactttaatttcatccatttaaaattcaatagaaa
aagttgcactccaaaaccattccctCTGGATTATTTTTACCtgagaacaa
cagaaattcaaaattcccatttggatttcgaaagaatttttatccccact
gtgggaagaaGCTCagccggggctgtgagacaggatgTATCAACTTTCTC
CGAAAAAGCTCTTCGTTTCTCATAGAGTTAACGTTCTCTGAttcgatttt
catcgaataagcaTCGAATAAGGAATCGTATTAAATGCAAGAATATCgag
ttagagagcatcaactgtatttCAAAAGATGGACGAAAGCTTAATAatgt
taagggctctgaccatagtataagaaagccgcggctggaatatctaccgc
attgtcttttcagttaatacacgggtttcgaattaaatctggcgcgagag
aaaaaatcaagtaaataaaaggagcgataaggggaaatgccttataaaag
gttgatagatttcctttcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGGCTGGAATAtctaccgcattgtcttttcagttaat
tgctgttccatctctgtctccgagctttataagaacatcaagatgctcag
tttatcATTGGTAGatagcttttgaaatttttctcttactttccttcaca
aaaagtttttttgttgctagatatctttgaatctgtacccaatagaactt
ttaggggtattttgtggaaacaatagttttttgccaaaattgaaattata
agaaactatattcaagatgacaactttcttgtcagtttgaatgataaatt
ttgaaggtgctggcttgaaactttcacagtattatctagatgtacttttt
cattgatttttaaaagaaaattcagtgaaatattgcgaaggcattcgagg
cactttgtttattttttagttctttcagcccagccattttgtgcttgttt
aaatttcttattgttgatcttttttttacaatggttttataatgcaagtg
tattatcaagggcatatcattgggatatcattaatgtctaaaacacactg
aaaagtaagtattaacgacaaaccaataaaatttaccattaaagatgcta
cattactgatctcttgatcaaaaaatagtcatcaaatacgacagagatag
aacaacagaagttCAGATGTTACCATTCCAGCcacggctttcttatacta
tgctctgaccatagtcggaaaatagattttagtatttgaatataaaaatt
atgttttaggttctttaacacttttaacaaagaattgcctttataaattg
cctTTTGATCAAATCCCTCAAGAGTAATTaggaatttaattgcaaaaatg
acgttacgaactttaaaaagacgttaatgatatgttgcatcaccttcttt
tataaaaagtgctaagtcttaatgggtaattaacctttttgtttcgaagt
tttttcaaactgtacgcaaagaattgaacttttttaaatttttcggaaaa
attttctaaatcaatgcatcaaaagttatgactgtttttctatgaaaaat
tgggataaaaaactggtcaaaaagcactattttcaagattttgaagcaaa
taagcattcagaaaaattttccgaaaaaataattttagttcggtaaaaga
tacaccatctagcgcaaaaaagttttcaaaatgttttttcttcgccgaaa
ataagctcttcaaagttgaaatactcttcttcgcaaaattcttcattttc
ttcttcatcaaattttttcattgcagttcttaaattttcagactcacaga
taattggcctaacagaatatgtaaaacatgccacagttttgtgggctaca
tcaagtagaactttacattttgtaagtggcaaatataaaaaatttactat
ggtcagagcccttaattttgttttatttgctCCAACATGATaactttttc
aagaaatttacgACATAACCTTTTGCGCATAATCAAAGTGTAAATGAAGA
TTATAAAACGAAAATTGGCTTCCATGTTATACTTTCCGTTCCAGTCTATT
GCTGACAAGAGATGACGAGACAACAAGGTCTTCATATTACGTCTTCACTT
TTGTGGATAAAAATCTGATACCGCAGAACGATGAAAAAGCATTTCATAAA
TGGCGATTGGGAAGATCTGGAAACTTAGAGATGGCTTAGTAAGAGAAGAC
GTTAACATTCGATATTTTTCATCGTGATACGCTTTAATGGATCAAAGTCG
GGCTTTTTTACTATTTTGGTCTTCATTCTATTCTGTTTTCATTAAGCGgg
cccaatgaagtataagcccgaagggctagaatcgttggtaggatttgaag
ccaccAGCCCGTGTGGTTTTTATACAATTTCCGtattaaaagtaaaattc
tCCACtagattaaaaagaaataccactcgaaaacaaagaaatcgctaaat
tcaatccgtcatAAAAAAATACGGATGtattttcccagctggcacacaac
gttgtttcaatgttcatatGACGTTATAtaacgttgtgaacgttatttaa
acgttgaaacaacgttgtgtgccagctgggttaaggcttcattttttctt
gcctgagaaaggtcaaagattcgattctagagtttcgggcttatacttca
ttgagcTGGCCAATAAAACAAATCTTTTTACTAGCAGGTGCTATTGAAAA
GGCTCATGTTGCTAGGTTGTTTATACAAGTGGCTAATAGGTTTCAAGAAT
AAAATTTTCGATTAAGACACCTTTTTTCAACCGAAGGGGCCTGTTCTTCA
GCTAAATTTTAAGGTATTTAAATATCTTCTGATAATCTATGTGAACTCTT
TATATGGATAATTCTTTATGCTGGGATGAGACATTAAATAATTACCCCCT
ACTACGACAATGACCAAGTACAAACCATTGCCTTTTTAGCAGCGATTCAA
TCTCGTACCCACAGTCACTTGCAatcgttttgatttttctagtgGCCCTT
GGTTCAATCGTACCTTTCGTGACCGCTTAAAAGCAAACTTATCGTCTGAA
TCGAAAGTGCTggacgtttttttcttttcatacaGTTCATGGGATTCGAT
TGAACATCCGACGAAATACCAATGCGGTAAACTCAATCCGGACAGCTTTG
GTGAGTATTTCACTTTGCAAATTGAACATCTAACCATGTACTTGCGTTAG
CTAACAATTTGAATCAACAGTTACATGAAGAATATCCATTTGGGGTATAA
AAAAATTGCTAGGTCAAAATTCACGTCATGTAGAGGCGTAGCAAATTGTT
ATacaattaatttttcattttcacatatTAGGACATTTTGGTATCTGTGT
TCCTGATTACGAAGCTGCTATGAAACGATTCCGAGAGCTTGGATGTCAAG
TTGTTGAAAATCCAGGTGCGTCAAActcgataattttttcaaagctatag
taacgtaccctgagtatcagaggttaagttttcaaagaatatattaacct
ctgaagaccaataatagaaaatttatcgcgcatgtgtcaatctaatcact
gtagaaagaatcaaagatgaagagcaaatattaccatattaatgtctagc
agactgtatcagtatgcagtttactatttacaaattcccaagaaacctcc
aagtgtaattgaagtgagtttctttcgaaagaaatcttttacatgatccc
caaatgtataacagtaattactaaactataattgaatcgaaataatagac
agactttatgttatgattctctatcactgactctttttaaaaagcattga
tgatatctttttgttgtgttttcaacgacgagaataaaaatatcaacttt
gaacttcatccaagatcttggacgGTCGTCATGGTtccttttgtcttcgt
tgattgcgcgatgaatataatctcgattcgtcggcacagcgtcaatatat
gattttgacctgtgcttttcacggtaatagTAACGGGCTTCATGATTTAA
ATTACTGGATTTAAATTCCACACCGCAACTAtcaatgggggggggggtaa
tgaaattttgaaagttattcaatttccttattttacACATAAGCAATATG
CCGTACAACTGGAAAAAAACGTTTAGCACTTTCAGTCGGCTGTCTCAAAT
AAAATTATCCCGGACGAAAAGTTAGTTGGGAAATATCAAACTtgtatccc
agctggcacacaacgttgtttcaacgtttatctaatgttcataacgtcca
tataaccttaggtgaacgttgaaacaatgttgtgtgccagctgggattct
GAATTACGGTAGTGTGTTCATATATGTTGAGAGCTGTAAGTGTGAGAGCC
TCCGAACGGTTTCGGCCACGTGGATCACCGTTGGACCTCTCAGGCTACTG
GTTCCCAGACCCCTGGTCACTGAACCAGACCCTCCACAGTGAGACCGAGG
CAGTTCACGTGCGACTCCAAGGGAAGAAGGACGTTTTTAATGGCACTTAT
ATCATGACAATGAAAGAAACTGTTTAAACCAATATACTATTGTGTCCAAC
GTCGTTTATTCTATTTACTACCCCTTTGAGCCCCCTTTTAACATACGGTA
AGCTCtcattttctctttttgatttctgCTTCTCTTTCAGCCGACACATC
ACTCTCATATATCCTTGATCCAGATGGATACAAAGTGGAAATATTTGAAT
GTCATTGGTCATAATTTCCCTTCGACGCGATGTACTATTCATGAGTGGAA
TATCAAAACTCCATATCCAAAAATTTGAACAGTTATTTCTTTCTGACC

Coding sequence (CDS) from alignment at sc0000050:259606..268303+

>TCONS_00004991 ID=TCONS_00004991|Name=TCONS_00004991|organism=Clytia hemisphaerica|type=CDS|length=3618bp|location=Sequence derived from alignment at sc0000050:259606..268303+ (Clytia hemisphaerica)
ATGATACGGTCACCAAAATATATCTCATCAATTGTATCACGATCAATTCG
TTTGTTGGTTGCAAGAAATCTTTCGTCATCAGTTACAAGaATGAGTTATC
CGAGCAAAGAGGAGATATCCAATGCAGTTCAAGAGTCCCACTCATCAACA
AAACAGTTCGTCTTAACAGAGACTGCTATACGTATATCTAAACCTTTGGA
AACGATCAAATTTTACACTGGAGTACTTGGAATGACTCTATTGCTGACAA
GAGATGACGAGACAACAAGGTCTTCATATTACGTCTTCACTTTTGTGGAT
AAAAATCTGATACCGCAGAACGATGAAAAAGCATTTCATAAATGGCGATT
GGGAAGATCTGGAAACTTAGAGATGGCTTATTCATGGGATTCGATTGAAC
ATCCGACGAAATACCAATGCGGTAAACTCAATCCGGACAGCTTTGGACAT
TTTGGTATCTGTGTTCCTGATTACGAAGCTGCTATGAAACGATTCCGAGA
GCTTGGATGTCAAGTTGTTGAAAATCCAGCCGACACATCACTCTCATATA
TCCTTGATCCAGATGGATACAAAGTGGAAATATTTGAATGTCATTGGTCA
TAAATGATACGGTCACCAAAATATATCTCATCAATTGTATCACGATCAAT
TCGTTTGTTGGTTGCAAGAAATCTTTCGTCATCAGTTACAAGaATGAGTT
ATCCGAGCAAAGAGGAGATATCCAATGCAGTTCAAGAGTCCCACTCATCA
ACAAAACAGTTCGTCTTAACAGAGACTGCTATACGTATATCTAAACCTTT
GGAAACGATCAAATTTTACACTGGAGTACTTGGAATGACTCTATTGCTGA
CAAGAGATGACGAGACAACAAGGTCTTCATATTACGTCTTCACTTTTGTG
GATAAAAATCTGATACCGCAGAACGATGAAAAAGCATTTCATAAATGGCG
ATTGGGAAGATCTGGAAACTTAGAGATGGCTTATTCATGGGATTCGATTG
AACATCCGACGAAATACCAATGCGGTAAACTCAATCCGGACAGCTTTGGA
CATTTTGGTATCTGTGTTCCTGATTACGAAGCTGCTATGAAACGATTCCG
AGAGCTTGGATGTCAAGTTGTTGAAAATCCAGCCGACACATCACTCTCAT
ATATCCTTGATCCAGATGGATACAAAGTGGAAATATTTGAATGTCATTGG
TCATAAATGATACGGTCACCAAAATATATCTCATCAATTGTATCACGATC
AATTCGTTTGTTGGTTGCAAGAAATCTTTCGTCATCAGTTACAAGaATGA
GTTATCCGAGCAAAGAGGAGATATCCAATGCAGTTCAAGAGTCCCACTCA
TCAACAAAACAGTTCGTCTTAACAGAGACTGCTATACGTATATCTAAACC
TTTGGAAACGATCAAATTTTACACTGGAGTACTTGGAATGACTCTATTGC
TGACAAGAGATGACGAGACAACAAGGTCTTCATATTACGTCTTCACTTTT
GTGGATAAAAATCTGATACCGCAGAACGATGAAAAAGCATTTCATAAATG
GCGATTGGGAAGATCTGGAAACTTAGAGATGGCTTATTCATGGGATTCGA
TTGAACATCCGACGAAATACCAATGCGGTAAACTCAATCCGGACAGCTTT
GGACATTTTGGTATCTGTGTTCCTGATTACGAAGCTGCTATGAAACGATT
CCGAGAGCTTGGATGTCAAGTTGTTGAAAATCCAGCCGACACATCACTCT
CATATATCCTTGATCCAGATGGATACAAAGTGGAAATATTTGAATGTCAT
TGGTCATAAATGATACGGTCACCAAAATATATCTCATCAATTGTATCACG
ATCAATTCGTTTGTTGGTTGCAAGAAATCTTTCGTCATCAGTTACAAGaA
TGAGTTATCCGAGCAAAGAGGAGATATCCAATGCAGTTCAAGAGTCCCAC
TCATCAACAAAACAGTTCGTCTTAACAGAGACTGCTATACGTATATCTAA
ACCTTTGGAAACGATCAAATTTTACACTGGAGTACTTGGAATGACTCTAT
TGCTGACAAGAGATGACGAGACAACAAGGTCTTCATATTACGTCTTCACT
TTTGTGGATAAAAATCTGATACCGCAGAACGATGAAAAAGCATTTCATAA
ATGGCGATTGGGAAGATCTGGAAACTTAGAGATGGCTTATTCATGGGATT
CGATTGAACATCCGACGAAATACCAATGCGGTAAACTCAATCCGGACAGC
TTTGGACATTTTGGTATCTGTGTTCCTGATTACGAAGCTGCTATGAAACG
ATTCCGAGAGCTTGGATGTCAAGTTGTTGAAAATCCAGCCGACACATCAC
TCTCATATATCCTTGATCCAGATGGATACAAAGTGGAAATATTTGAATGT
CATTGGTCATAAATGATACGGTCACCAAAATATATCTCATCAATTGTATC
ACGATCAATTCGTTTGTTGGTTGCAAGAAATCTTTCGTCATCAGTTACAA
GaATGAGTTATCCGAGCAAAGAGGAGATATCCAATGCAGTTCAAGAGTCC
CACTCATCAACAAAACAGTTCGTCTTAACAGAGACTGCTATACGTATATC
TAAACCTTTGGAAACGATCAAATTTTACACTGGAGTACTTGGAATGACTC
TATTGCTGACAAGAGATGACGAGACAACAAGGTCTTCATATTACGTCTTC
ACTTTTGTGGATAAAAATCTGATACCGCAGAACGATGAAAAAGCATTTCA
TAAATGGCGATTGGGAAGATCTGGAAACTTAGAGATGGCTTATTCATGGG
ATTCGATTGAACATCCGACGAAATACCAATGCGGTAAACTCAATCCGGAC
AGCTTTGGACATTTTGGTATCTGTGTTCCTGATTACGAAGCTGCTATGAA
ACGATTCCGAGAGCTTGGATGTCAAGTTGTTGAAAATCCAGCCGACACAT
CACTCTCATATATCCTTGATCCAGATGGATACAAAGTGGAAATATTTGAA
TGTCATTGGTCATAAATGATACGGTCACCAAAATATATCTCATCAATTGT
ATCACGATCAATTCGTTTGTTGGTTGCAAGAAATCTTTCGTCATCAGTTA
CAAGaATGAGTTATCCGAGCAAAGAGGAGATATCCAATGCAGTTCAAGAG
TCCCACTCATCAACAAAACAGTTCGTCTTAACAGAGACTGCTATACGTAT
ATCTAAACCTTTGGAAACGATCAAATTTTACACTGGAGTACTTGGAATGA
CTCTATTGCTGACAAGAGATGACGAGACAACAAGGTCTTCATATTACGTC
TTCACTTTTGTGGATAAAAATCTGATACCGCAGAACGATGAAAAAGCATT
TCATAAATGGCGATTGGGAAGATCTGGAAACTTAGAGATGGCTTATTCAT
GGGATTCGATTGAACATCCGACGAAATACCAATGCGGTAAACTCAATCCG
GACAGCTTTGGACATTTTGGTATCTGTGTTCCTGATTACGAAGCTGCTAT
GAAACGATTCCGAGAGCTTGGATGTCAAGTTGTTGAAAATCCAGCCGACA
CATCACTCTCATATATCCTTGATCCAGATGGATACAAAGTGGAAATATTT
GAATGTCATTGGTCATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_002831	XLOC_002831	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00004991-protein	TCONS_00004991-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000050	supercontig	sc0000050:259606..268303 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.425247	0.0592404	0.137568	0.134588	16.221	14.1775	13.5118	13.2346	2.61082	3.55097	1.72333	2.42753	15.9994	23.3289	22.2152	7.51487	3.96759	5.00151	7.87853	2.83821	23.0833	17.0178	12.7467	16.0214	10.4359	15.2513	13.9111	25.9587	56.1669	53.3094

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR029068	Glyas_Bleomycin-R_OHBP_Dase
IPR004360	Glyas_Fos-R_dOase_dom

Blast

[Close]

BLAST of TCONS_00004991 vs. Swiss-Prot (Human)
Match: LGUL (Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4)

HSP 1 Score: 112.079 bits (279), Expect = 1.409e-29
Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = 2

Query:  209 SKEEISNAVQESHSSTKQFVLTETAIRISKPLETIKFYTGVLGMXXXXXXXXXXXXSSYYVFTFVDKNLIP-QNDEKAFHKWRLGRSGNLEMAYSWDSIEHPTK-YQCGKLNPDSFGHFGICVPDYEAAMKRFRELGCQVVENPAD---TSLSYILDPDGYKVEIF 691
            + E   +   ++  STK F+L +T +R+  P +++ FYT VLGMTL+   D    + S Y   + DKN IP + DEK    W L R   LE+ ++W + +  T+ Y  G  +P  FGH GI VPD  +A KRF ELG + V+ P D     L++I DPDGY +EI 
Sbjct:   12 TDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKI--AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEIL 175

The following BLAST results are available for this feature:

BLAST of TCONS_00004991 vs. Swiss-Prot (Human)

BLAST of TCONS_00004991 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
LGUL	1.409e-29	39.76	Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 P...	[more]

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TCONS_00004991 (transcript) - C. hemisphaerica