TCONS_00004989 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004989
Unique NameTCONS_00004989
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2440

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004989 ID=TCONS_00004989|Name=TCONS_00004989|organism=Clytia hemisphaerica|type=transcript|length=2440bp
ACCCGTACTCAGGCGATTGTGAATTACAGGATGGTGAAAAATTATCTAAA
ACGAATTTATATATTAGAGGGTTACCAATTTCAACGACAGACGATGACTT
AGTTAGTATGTGTAAAGTATATGGCAACATCATTTCGACCAAAGCGATTC
TCCACAAAGACACGAACCAATGCAAAGGATATGGCTTCGTCGACTTTGAC
AACCCAGCTTCAGCTCAAAGAGCAGTAGCATCTTTACAGAGTCAAGGTGT
TCAAGCTCAAATGGCTAAACAACAAGAACAAGACCCAACCAACCTTTATA
TCTCAAATCTACCGAAAACTTTAGATGAACAGaCCCTACAACAAATACTT
ATGCCATACGGAAATGTCATTTCAACACGAATTTTACGAGATTCGAACGG
ATGCAGCAAATGTGTTGGTTTTGCCAGAATGGAATCGAAAGAAATTTGTG
AGAAAATTATCAACAGTTTGAATGGCAAATATTTACAGGGAAGTTCAGAT
CCACTACTCGTGAAATTTGCTGATGGTGGACCAAAGAAAGCGAAACCAGa
TAAAGTGTGGCGATCTCATGACGAGagTTACATGGGTTATGATGTTCGAA
GTCCTGTATCctCTGTACCATCACAACCGACTGCACGAGTTACTCCAGTT
GTTCAAAATCAAATGATGTCACCATCGGGCGTCAATTGGGGTGTTCAACA
ACAATCATATACCGTCGTCTCACCGCAAGGGGTGCCAGTGTCGCCAGTGG
ACACAGCCACAGCAATGCAATCCAACATCACCCATATGACCAATCAAATG
GCACAAATGCAAATGCATGGTGCACCATCTAACAATGGTCAATACATCGT
GCCTGGTGGCTACCCGTCGGCCGCTGCGGCGCATCAAAACACATGGCATG
GAATGTCGCAACAGAGTCATCCACAGTCGAATATACAGGAATCACCAGTC
ATAATGACTGCAACCGAAGTAGAATCGAACTATCCTCCACCCCAGATACA
AACAACAGGGCCACAACAACACATGCCACATGTCGTCAGTAGTGAATTGT
ATTCCGACGATCAACAGAACAGAGTCTATTACGCAAGGAAATAGAGCACT
GACCCAAACAAGACCGATTATTTTTTGATACAGAAACGTGCAAGCAATGA
GCTGTTTCCTCGTTTCTTAAGAGACAGGTGGACTTCTTGCTGAGCTGGTG
AAATGTGTGGTTACGGAACCAAAGGAATAGAGACTAGCTGGAACGTTAGA
TGAGGGATTGAAACTTTGGGCTCTTTTTAAAAGATCCAAGGACAAATGGA
ATTGCTTGGACTAACCTTTGTAACGCGATCATTGATGATATTGTCTACTG
ATTCAACGTATCAATTTTGCCGGATTCGAATAATGGACAAGAAAGAGACT
ACCGAATCGGTGATAAAATTGAGATAATGTCGATGATAAATAGataaaat
gaacattttctacaaaacaattttttctttctttttattttatttttttg
tgacaGCGAAGCTTTGTTGCTGTTACAGAAATTTCTCAAACTTTTAGAGT
ATAAATTAACAATTTTCTAGGATACTCAGGGCATTGATAATAGTTTCAGG
CTAACGGcgatattttaaaaaatttctcgaTGAACAAAAATCTCTTTTAA
GCATTgataatgacttaaaaataattttccatgaaattttatcataactt
gaaatttcaaaaatcttttagaagaaagttttcaaaagaaaaccaaataa
ttttattatttttaggaagaattttttcttttagggaattttaaaatttt
aaacagaTTTAAAAGAGCTGTGAATATGTGAAGAGactaaaaagttttat
ttgaaaaaaagcaagtattttttatacttttagTGTTTGAAATTCCGTAG
TGCGTAGAAAAATTCGAGCGACAGTGAGTtagtgaaaaagatttttttta
cctttttgaatTCACGATTTATTTTGGGACGTGTAAAAAATGTGTGAGAA
AAATATAGACTGATAAGGCTttcaatttagaatttttgaatttgcAAATC
CAGGCAATGGGTCCGATTCCCTTAggttaatttcaattttgttgtttttg
ttatttttttgttttgtttttaatattgatgcttttgagaaaattttaat
tatttgattttattgtttttttctacttctcattttttcattttttttgt
tcttttagcACTTTATCCTTTTTGAAAGGATGGCACGCTAACTTAGACTT
TaagaagaaaatttattttatttattttcttggaATAGTTtttaggaaaa
gaaaaaaaaggtttttatgaagaattttttcatcattttttatgTCAGTG
ACCGGTTACCTTAGCAGCTGCGTTCCAGTCCTGGTTTCCTACCCTACAGA
ATCTTTTTTCACCTTCTTCGGGTAGTGGTGTTagtaattt
Run BLAST on NCBI

transcript from alignment at sc0000050:204465..214150+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004989 ID=TCONS_00004989|Name=TCONS_00004989|organism=Clytia hemisphaerica|type=transcript|length=9686bp|location=Sequence derived from alignment at sc0000050:204465..214150+ (Clytia hemisphaerica)
ACCCGTACTCAGGCGATTGTGAATTACAGGATGGTGAAAAATTATCTAAA
ACGAATTTATATATTAGAGGGTTACCAATTTCAACGACAGACGATGACTT
AGTTAGTATGTGTAAAGTGTAAGTAATGCTTTAGTTTTCTTTtcacattt
tcattaaagtgtaaaaaatgctttatttttctttccacGTTTTCATTAAA
GTGTAAATAATGCTTTAGTTCTCTTTTCacatttatttttaattgtaaGT
GATGCattagttttcttttaaaatctttcataTCTGGAATTATGCATGCT
AGGGTCATTCTAAGAAATTGTCAACTACGATTGGAGATCTACGCCTGATC
GGTGCTATCAAATGGTGCATGGGTCAGTGCGCTCCTAGGTCCCCTACTGG
TGGTATATCCAGTCAAAATAAGCGTGACCTATAACGTACCCCTTCCTCTG
GAAAGGCTGTTCATTCTTTCTGTTTACCACATGtatgaaacaaaacaaaa
atagataACCAATGTCTCATTCCTGTGGAAGCTGTTACCTCTGGATATTT
TCCGATTCCTTTCTGTATTTGTATGTAATACTTACATTAGTGACAAGGCT
CGGATTTTAAATAGATTTCAAGATGGTATCACAAGGCCAATTTTAAAGCA
TCGACCAGTAACTGCCGCGATACATTCCCTGTTAGAAACTGTataaattg
ggcttttccagaaatagtccgtgcccactgttgaggatatcggatggata
tccagggggttaaatatctacaagggagtggGTATCAGGGgataaagtgt
cttttcaagtaaaaaatacgatacccaggggtaagcatctttataaaagA
GGATATctagggggttgagcatatttttaagagtgtaTATCCAGGGGCAG
TTActggtctttactaataaagggggttcgatactttgaaaaatcaatat
cctcaacagtggggtaaaatcttttttctggaaaagcccattggaGCTGA
AATTACAAATCTTTATGCTCTATTTTTCCAATACAGATATGGCAACATCA
TTTCGACCAAAGCGATTCTCCACAAAGACACGAACCAATGCAAAGGATAT
GGCTTCGTCGACTTTGACAACCCAGCTTCAGCTCAAAGAGCAGTAGCATC
TTTACAGAGTCAAGGTGTTCAAGCTCAAATGGCTAAAGTAAGTTTTTAAA
GGCCTTACATTTTCATTGCCAACAAATAAGAGATTTGATTATGTTACTCT
TGAACCAAGATTTGTTTTGTATTCAATTATTCCATGAATTGTTTGGTCAG
GTCAGATATAAACGTCTAATGATTTCTACGAAATACTTTTACTTCTTTTC
AGCAACAAGAACAAGACCCAACCAACCTTTATATCTCAAATCTACCGAAA
ACTTTAGATGAACAGGTAAAAAGAATTAATAATTTTTACATTATCATACC
TAAAAAGCTACTATACACGTTTATATCACATGTTCATCCTTAAGCTTCTA
TAGTTTCCAGGCCATTGAAATAGCCAAAGTATACTGGTAACAATAAGGCA
CTATAGACTTACTGGCTTCGCAAAATACCTTTGACTAGAAATAAGTTGGA
GTGGTGTAATACTGCAGTGTATTATTGAATTCCCTGGAACACTCATAACA
GTTTCTAAtaccttcccagctggcacaaaacgttgtttcaacgttcatat
aacgttatatgaacgttatgaacattagaaaaacgttaaaacaacgttgt
ttgccaGCTGGGTTATTATATGTGTTCATAATATTAAACTatggattctt
ttgttttttatagaCCCTACAACAAATACTTATGCCATACGGAAATGTCA
TTTCAACACGAATTTTACGAGATTCGAACGGATGCAGCAAATGTGTTGGT
TTTGCCAGGTAAAAGAATTGTCTGATTTCACATCTTGCTTCATTGGAAAC
TATACCGAAGCCAttacattttttcaatttgataTATTTCACACTACCCT
TAGGCTCAGAATTCTAAAGCGATGTTCTGGATGCTCTAAGAAAAACATAT
GCCAGGGGCGACATTCTGATACCCACACCCTTGTTTAAACAAAGTAAACG
GAAAGAAATCAGCTATACATCTATTTCTGAATTTAATCACACGTTTTTTT
ACGagaagaaaactttttaagccttttgatgttctttatttttttgagtt
tcaaattttcaagtttaaaggtGTTCTATGTTCTTATTTATGTCCATTTT
CCTCTGAAAttgttttcgagtccgcaaagccataaaatgttcttaacttg
ttcttaacattttggccatggaagcattatgctcttatatagtttgttct
tataaaaaaaaaacgttttattaTAATTCTTTACCTCTGCTACACTTTTA
GAATGGAATCGAAAGAAATTTGTGAGAAAATTATCAACAGTTTGAATGGC
AAATATTTACAGGGAAGTTCAGATCCACTACTCGTGAAATTTGCTGATGG
TGGACCAAAGAAAGCGAAACCAGGTTTGTCTTAATAAGAATCATACCGTT
GGTCTTATTTCGatatccctcttctaatttcgacacccttctttagagat
agaaataatgggaaggtcggaatcactgattgaaactgattttctttgCT
TAACGATCACAGAGGAATAAATCTCTTGTCtgtcagtgattctgacctac
ctattattcctatctctaattagaagagggatgtcgacattaaaCCAACC
TACGGTACTTATTAATTTGAATTCTATTTTGTCTATGTGCGCTCTTAAAT
TACGAAACCTTTTCCCAAGAAACTGTAAAAGTGACGGATTAAAGTGTTAT
GGTGCTGTGTTATGTACAGTATTGCGTAGATTGAATTTGCACCAACGgga
ggatttttttatttcgatcctttaaaatgcttcaaaataCAATAAGCCGA
AGCGGTATAAAGGTCCAGCGACACGAAACTGTCGTTACTCTTAgatgcca
aataaacggccccccccccgcttgttaatttttcgatttttttccaaccc
ccccggactttattaggacccccccgtttattaagttttgaaataatttc
cagctcccaaaaggaaagtttcttgttttactctcaaaagcctaaattta
gtctatttgaccctttttagggtttttaaaagtcaattttccaacccccc
ggtaattatgtccccccccgtttatttgatttgaaaattctttccaaccc
ccctgtttattcgaaccccccgtttatttggcacctaagagtacaagGAC
AGCATGATTTCTTCTAAAATGAACTTGAATATTAAAGCACTGGACAAACC
ACGAACCAGAACTACGGACAGTAGGTGAAATGCTAAAAACGGCCCATGTA
CCTTTTAAAACGTGAAACCTTCTCTCAAGAAACTGTAAAAGTGACGGATT
AAAGTATTACATGGTGCTTTGTTAAGTACAGTATTGAGTAGATTGAATTT
CCCAATCTCTTACCCAGAGCTTcttgcaccactttttgattttacttatG
GGTGTGTGATACAATCCTTTCGTAAGTACGcacgctatcagaatcataaa
agagtgaactaagggactgggttcgagtttgaaatttttcaacactAACA
AACTACAAATGTACGATACGTaatatatttctattttttttctagaTAAA
GTGTGGCGATCTCATGACGAGGTatgttttgttgaaaaaaaaacactcaa
aagTTCCCgtattttttgctattttaaaTAAAGTTACATTCCATCCAGTa
tttagtctagcaagctagacgactaattcaaacATAATagaaatggagga
aaaaattTTAGTCTATaaaaactaaatcccgtaacaataatcgtattatc
atataacgcctatactactgtattccacgcattataaacgactccagtct
atccaATATTCGGTATTTCCGGAGCATAACGTTTGCATTTCTTGATTTTG
CAATATCCTTCACCGGGGAGGGGGTAACTAAGCAAGTGAAGGTACGTGTA
TGTGCCTTAAAGGCTACATTTTTAGAGGTTGGAGAGCACGGCGTccttcc
tcctttctgacataATGTATTATTAATCCTCGAACgctctctttcatttt
ttcagagTTACATGGGTTATGATGTTCGAAGTCCTGTATCGTAAGTAAAC
AAATTACATTCGATATTCTTTATAAAGTAATGAAGCACCATGCCAATATG
GGAATTTTGACTCATTTTAGCATTTAGCCCTTCCNATCTTTATATAGTAA
TGAAGCATCATGCCAATACGGGCATTTTGACTCATTTTAGCATTTAGCCC
TTCCATATAATTTGGAATATTCAAAAATTAGTATTCAATCAATGTTTTAG
CTTTTCATATCATCATTTTGCAAtcattgttttttaataaaaaatccaat
tttcagctCTGTACCATCACAACCGACTGCACGAGTTACTCCAGTTGTTC
AAAATCAAATGGTATTCCTTTATGTTTTTCTTCTATGATATTAAATTTTG
TTAGGCACTTGGCCCACCCTTATTTTTGATCAATGAAACTTTCGAAATCC
TTCTCCATTTATCAGGCCATCGTTACCGTACACATAGCCCACATTTAACG
TCTATCTAACGTCATGTACCGTCAGCTGACAGTGTGGAAAGTTTTCCCCA
TGCCCCAAAAGGGGGAGGGGGGTGTGCCACCAAAGTtggaaaaatggacc
ctacgtgggactcgtttttttttaaagtgaccTTGATGGAActgaaatat
atattttccaaattttccccAATAAAGATACCCTACGggtgactgatttt
tctattttggtgttttttgcgaccctacctgggactcatgaAGGTGAAAA
AAGATACCCTGACCAGCGACACATCCCCGTAAATTTTCGAATACACCAtc
tcaagcaaaatgactcacaagAAACCAATCCTGATAGCTCTTAGCGATAC
TGGTTACTTACTTTGTAGGATTTTTGCCAACTCTCTTTGACACTGTATCA
TTATTCATTCTAGATGTCACCATCGGGCGTCAATTGGGGTGTTCAACAAC
AATCATATACCGTCGTCTCACCGCAAGGGGTAATGCTACCTAATTCTAGT
TGGAATTTCAGGTCTAAACATTGAAAAAGTCTGTTCCGCTCACCAGAAGG
ACTCATATTGAAAAAGAATCCAGTGGCagttataaaaaaatttaaatgtg
GAAATTTTTTATATGGTTTTGACACAGTCATTGTAAATGACCCATTTTAT
AATGCATTATTAATAAAGACTATGGTTTAGGTTAGATTGCAATTTGTGAA
CGGATtgcgaaaatagaaaaaaaatcttcgcTTTATATTAACTAGATACT
ATTCTTGATNCTCTTTGACACTGTATCATTATTCATTCTAGATGTCACCA
TCGGGCGTCAATTGGGGTGTTCAACAACAATCATATACCGTCGTCTCACC
GCAAGGGGTAATGCTACCTAATTCTAGTTGGAATTTCAGGTCTAAACATT
GAAAAAGTCTGTTCCGCTCACCAGAAGGACTCATATTGAAAAAGAATCCA
GTGGCagttataaaaaaatttaaatgtgGAAATTTTTTATATGGTTTTGA
CACAGTCATTGTAAATGACCCATTTTATAATACATTATTAATAAAGACTA
TGGTTTAGGTTAGATTGCAATTTGTGAACGGATtgcgaaaatagaaaaaa
aatcttcgcTTTATATCAACTAGATACTATTCtttatgcgtaagtcaaga
tgacgtcatattttttaacggaagcacccaaaaaagccggtttttgtcct
ccgtgtttctatttttagtaacagagagaggtcaaatcctAGCTTTTTAG
GGTGTTTACGctagaaaaattactttcgcATATCAAGCATTATTCCTTCG
CTTCAAATGTACACTTCATTTTGCAAAATGTGAAAACCATTCTCAAGAGA
TATAGTCTAAATACTTACATGGTTTTCACATGGTAAAAATAGTGAACATT
CAAAACGAATGGACTTTAAGAGACAATTTTTCAATATTACTCCCttcaat
gggctattccagaaatagtctgtaccccttATGTTgcggaggtgtgacgt
ccagggtggtttggaaaattaaaaatccagagtggtcagtaaaatcgggt
tgaaaatccagggtggtcagtataacgaggtcgaaaatccagggtcCAAA
GATatgggagaaaaaaatccaagggggtcacctttttaaaaaaagatctc
cccagcatagggggtacaaattttttctggaatagcccaattgtATGAAC
TTACATAGATTTTAGTACCGCACTATATTATCATTTTCTTCTCATCAACA
GGTGCCAGTGTCGCCAGTGGACACAGCCACAGCAATGCAATCCAACATCA
CCCATATGACCAATCAAATGGCACAAATGCAAATGCATGGTGCACCATCT
AACAATGGTCAATACATCGTGCCTGGTGGCTACCCGTCGGCCGCTGCGGC
GCATCAAAACACATGGCATGGAATGTCGCAACAGAGTCATCCACAGTCGA
ATATACAGGTTCTTAAATGATTTCTTTCATTGCATCGTCTGGGTTTAATC
GTgttaaaaagctctaaaatCAAGAGAAGAAATAGATTGTTTAATCTATA
AATAAAACAGCCGTAATGACGGCTGCAAACTCCGGTAATTGTTATAGGTC
AGCCTTTCTTAAAATATCTAACATAAAAGTAAGTGCAAGCGCAAACACAA
accaaatcgggaaatcaaaccggaaagatcgggaaatcgaaccCGACTAT
CACGATTGATTggatttacgcacaattacaaatgaaaaacactgatttta
agaaactccttaACCGGGAGTTTAATTAGTTATAAGCATCTGAATCCAAT
ACGATTTCTATTATTGAAAATTCTCCAAACAGTTTTCtaacaaaatttca
atattttgaattttaagaatAATGAGAACCCGGGGCCCAGTTTTGGCTTA
AACTTTATCTCAAAAATAGAGCTTAAGAGAAAAACTTGAGAACAATTCGG
TAagaaaatatctaaaataataACACCTAAAGCCTCGACTAAACATTTTT
GCTCGTTAGAAAACTTCATAAAACGGTAAGCGTTTATATCTTTAGAAATT
AGTACAATCACCCTGCAAGTTTataagggacataaaagtactgacgaaat
ttgtaaacaaaccgcatgcagcgggatacaaaatcaaaacaaatatcaca
tgttaaaagaaaaaatccaaacaaatatggctgattttgattgtttcaat
tgttttacaagtttgttttggacacgtgattttaattgttctctttaatg
acacgtggttcgtgcattgtttacattttactacttttatgtccctttaa
tattGAAGATTCTTTCTTTCAACAGGAATCACCAGTCATAATGACTGCAA
CCGAAGTAGAATCGAACTATCCTCCACCCCAGATACAAACAACAGGGCCA
CAACAACACATGCCACATGTCGTCAGTAGTGAATTGTATTCCGACGATCA
ACAGAACAGAGTCTATTACGCAAGGTATGTTTTTTATCGAATTTATacca
aatagaccttttcataaatcacgtcacgaacatcacttgcctcgtattca
accaaatttccatggtgatcataTTCCTTgaaacattaaatgattttttt
gaacatttggGATGTGTTGTTGTGGCCATGTTGTTTGTATCTGGGGTGGA
GGATTCTACTTCGATTGCAGTCATTATagaaaatagttgtaataaaatcc
gctgggagttaatcgcCAAGGCAATAATTtaaaaacgaggcaagtgatgt
tcgtgacgtaatttatgaaaaggtttattgTAAAGAAGTAATGTGAaata
ttcaatgtttttgtCAAGATGAAGTATAACAGTCAGATTCTAGGACCCCC
TGTCTCCGTTTGAAATTCTTCCCATAGtgggaaaaaaatgtttatcgaAA
TCCAAATGGGNacccctgtctcacaactcCGTTTGAAATTCTTCCCATAG
TGGGAATTAAAATGTTTATCGAAATCCAAATGGGGATAGGAACCCTATCG
TTCAAATAATCAAGTATGATTCCCATTAGACTTCGAATGGGGATAAGAAA
ATTAATATCCCAGTAGGGCTGAAGTTGTGGGGTATAATTTTTCAATGTGT
CGGATGTCCAAGTAGGTCTGCGGCACTGCGGTGTTCTAGGAACCGAATAC
TAATTAAAAGTTCATTTCTTGTTTTCTTTATAGGAAATAGAGCACTGACC
CAAACAAGACCGATTATTTTTTGATACAGAAACGTGCAAGCAATGAGCTG
TTTCCTCGTTTCTTAAGAGACAGGTGGACTTCTTGCTGAGCTGGTGAAAT
GTGTGGTTACGGAACCAAAGGAATAGAGACTAGCTGGAACGTTAGATGAG
GGATTGAAACTTTGGGCTCTTTTTAAAAGATCCAAGGACAAATGGAATTG
CTTGGACTAACCTTTGTAACGCGATCATTGATGATATTGTCTACTGATTC
AACGTATCAATTTTGCCGGATTCGAATAATGGACAAGAAAGAGACTACCG
AATCGGTGATAAAATTGAGATAATGTCGATGATAAATAGataaaatgaac
attttctacaaaacaattttttctttctttttattttatttttttgtgac
aGCGAAGCTTTGTTGCTGTTACAGAAATTTCTCAAACTTTTAGAGTATAA
ATTAACAATTTTCTAGGATACTCAGGGCATTGATAATAGTTTCAGGCTAA
CGGcgatattttaaaaaatttctcgaTGAACAAAAATCTCTTTTAAGCAT
Tgataatgacttaaaaataattttccatgaaattttatcataacttgaaa
tttcaaaaatcttttagaagaaagttttcaaaagaaaaccaaataatttt
attatttttaggaagaattttttcttttagggaattttaaaattttaaac
agaTTTAAAAGAGCTGTGAATATGTGAAGAGactaaaaagttttatttga
aaaaaagcaagtattttttatacttttagTGTTTGAAATTCCGTAGTGCG
TAGAAAAATTCGAGCGACAGTGAGTtagtgaaaaagattttttttacctt
tttgaatTCACGATTTATTTTGGGACGTGTAAAAAATGTGTGAGAAAAAT
ATAGACTGATAAGGCTttcaatttagaatttttgaatttgcAAATCCAGG
CAATGGGTCCGATTCCCTTAggttaatttcaattttgttgtttttgttat
ttttttgttttgtttttaatattgatgcttttgagaaaattttaattatt
tgattttattgtttttttctacttctcattttttcattttttttgttctt
ttagcACTTTATCCTTTTTGAAAGGATGGCACGCTAACTTAGACTTTaag
aagaaaatttattttatttattttcttggaATAGTTtttaggaaaagaaa
aaaaaggtttttatgaagaattttttcatcattttttatgTCAGTGACCG
GTTACCTTAGCAGCTGCGTTCCAGTCCTGGTTTCCTACCCTACAGAATCT
TTTTTCACCTTCTTCGGGTAGTGGTGTTagtaattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002829XLOC_002829Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004989-exon-sc0000050-1491911889:204465..204582TCONS_00004989-exon-sc0000050-1491911889:204465..204582Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:204465..204582TCONS_00004989-exon-sc0000050-1510915933:204465..204582Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:204465..204582TCONS_00004989-exon-sc0000050-1575043694:204465..204582Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:205501..205651TCONS_00004989-exon-sc0000050-1491911889:205501..205651Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:205501..205651TCONS_00004989-exon-sc0000050-1510915933:205501..205651Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:205501..205651TCONS_00004989-exon-sc0000050-1575043694:205501..205651Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:205817..205879TCONS_00004989-exon-sc0000050-1491911889:205817..205879Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:205817..205879TCONS_00004989-exon-sc0000050-1510915933:205817..205879Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:205817..205879TCONS_00004989-exon-sc0000050-1575043694:205817..205879Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:206278..206372TCONS_00004989-exon-sc0000050-1491911889:206278..206372Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:206278..206372TCONS_00004989-exon-sc0000050-1510915933:206278..206372Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:206278..206372TCONS_00004989-exon-sc0000050-1575043694:206278..206372Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:206866..206987TCONS_00004989-exon-sc0000050-1491911889:206866..206987Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:206866..206987TCONS_00004989-exon-sc0000050-1510915933:206866..206987Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:206866..206987TCONS_00004989-exon-sc0000050-1575043694:206866..206987Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:208160..208185TCONS_00004989-exon-sc0000050-1491911889:208160..208185Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:208160..208185TCONS_00004989-exon-sc0000050-1510915933:208160..208185Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:208160..208185TCONS_00004989-exon-sc0000050-1575043694:208160..208185Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:208620..208654TCONS_00004989-exon-sc0000050-1491911889:208620..208654Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:208620..208654TCONS_00004989-exon-sc0000050-1510915933:208620..208654Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:208620..208654TCONS_00004989-exon-sc0000050-1575043694:208620..208654Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:208921..208975TCONS_00004989-exon-sc0000050-1491911889:208921..208975Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:208921..208975TCONS_00004989-exon-sc0000050-1510915933:208921..208975Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:208921..208975TCONS_00004989-exon-sc0000050-1575043694:208921..208975Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:209528..209593TCONS_00004989-exon-sc0000050-1491911889:209528..209593Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:209528..209593TCONS_00004989-exon-sc0000050-1510915933:209528..209593Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:209528..209593TCONS_00004989-exon-sc0000050-1575043694:209528..209593Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:210866..211072TCONS_00004989-exon-sc0000050-1491911889:210866..211072Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:210866..211072TCONS_00004989-exon-sc0000050-1510915933:210866..211072Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:210866..211072TCONS_00004989-exon-sc0000050-1575043694:210866..211072Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:211940..212088TCONS_00004989-exon-sc0000050-1491911889:211940..212088Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:211940..212088TCONS_00004989-exon-sc0000050-1510915933:211940..212088Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:211940..212088TCONS_00004989-exon-sc0000050-1575043694:211940..212088Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1491911889:212798..214150TCONS_00004989-exon-sc0000050-1491911889:212798..214150Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1510915933:212798..214150TCONS_00004989-exon-sc0000050-1510915933:212798..214150Clytia hemisphaericaexon
TCONS_00004989-exon-sc0000050-1575043694:212798..214150TCONS_00004989-exon-sc0000050-1575043694:212798..214150Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:204465..214150 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0154896	0.0146254	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00004989 vs. Swiss-Prot (Human)
Match: RBMS3 (RNA-binding motif, single-stranded-interacting protein 3 OS=Homo sapiens GN=RBMS3 PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 2.965e-77
Identity = 123/175 (70.29%), Postives = 145/175 (82.86%), Query Frame = 3 
Query:   33 GEKLSKTNLYIRGLPISTTDDDLVSMCKVYGNIISTKAILHKDTNQCKGYGFVDFDNPASAQRAVASLQSQGVQAQMAKQQEQDPTNLYISNLPKTLDEQTLQQILMPYGNVISTRILRDSNGCSKCVGFARMESKEICEKIINSLNGKYLQ------GSSDPLLVKFADGGPKK 539
            GE+LSKTNLYIRGLP  TTD DL+ +C+ YG I+STKAIL K+TNQCKGYGFVDFD+PA+AQ+AVASL++ GVQAQMAKQQEQDPTNLYISNLP ++DEQ L+ +L P+G+VISTRILRD+NG S+ VGFARMES E CE +I   NGKYL+        S+PLL KFADGG KK
Sbjct:   55 GEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKK 229
The following BLAST results are available for this feature:
BLAST of TCONS_00004989 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RBMS32.965e-7770.29RNA-binding motif, single-stranded-interacting pro... [more]
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