TCONS_00004897 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004897
Unique NameTCONS_00004897
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1478

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004897 ID=TCONS_00004897|Name=TCONS_00004897|organism=Clytia hemisphaerica|type=transcript|length=1478bp
ATTAATACAATTAATTAAAGAGCGTGGTATCAAAGGTATCCACGTAACCA
TTTATTGATTGAATTGGGGCAAAAAAGGGTACACCAATAACTTATATACC
CAGAATTGATGTACCAGTGGGGTTTCTGAAAATAACCTCTGTAGAAAACA
TTCTTTATTATTAACTATTGTTTTTGCTGACAGATATctaataatatttt
tgtcaaatccaCAACTCATTTCAAGATGAAGAGAAATTTTGAGTCCATCA
AGCTTGACGATGATGAAGACGATGACGTCTTAATTGTGAGCTCTTATAAA
AGAGACCAACAGAATCCTGCATCACAGCCAAGCACTACAGCATTGACATC
TGCAACACCAGCAACATCATCTACCATAACAACTATCACCACTTCGATCC
CTAAAACAATAACAATTACACTTGGGTCTTCTTTAAAGGCACCTTCTAGT
GCAACAAATACGCTACCTGGGCCGTCGAGCCTTTCCCATCCTCCATTTAG
ACCAGTGCAAGTTTTTGCAGGGCCATCAAGTATACGCAGTGGTTTGATGT
CTTTCAATCCTGGATCATCTGCCTCTTCCCCTAAGTCATCTTTCTTAATC
AACTCCATCAGAATGGGACCACCGTATCCATCAGGCATCAGAAATCGTAT
TCCTGTTCGACCCCCTGTTCAAAAGTTCCAACCTGGTCCAGCTAGGCCGA
TGAGCTTCAGGCACAGATTCTTCAATCCTCAAGAAACATCGCAACCATAC
GTGTCAACAATTGATTTATTGGATACTGACTCAAGTGGTGGTCCATCTAC
TGATCACAGTTCTGATGGTGAGGATGACAATGCAAGCACATCGTCAAACA
CTAATGATGCACCGCCTGAATCAACTCAAAGTAAAAAATCCACTCTTATT
GACTCGAGTAAAAAAGTATCACCTGATCAAAAGACAAAGAGTTCCGGAAT
GAGATCGTCAGCATCGTCAAAAAtaatcgaaccaatcatcATCGAGGATT
CCCCACCGAGCAGTCCCTCTTACAGCCCAGAATGCAGTCCACCTCACACC
AGTGAAGATCAAGTCAAACCTACACAAAATAAGAAAGTGAAAGTGGGCAT
GGGAATTACATATGGAGCTCAAGCTGAACCACAAGTTGATGCCATTAGTA
AAGAAACAGAAAGGATGCTTCAAAATTTGTTACCAAGTGAAGAAAGTGGT
GAAAATGATGAAGAACTATCAAATCTacttaaaacTGGTATGAATATGAT
TGATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAac
CAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAACATGGCAAT
ATACCAAGAGTGCTTTCCTTTTTATATGGTGGTACGAACCCTTGTGGAAT
CGTCAAAAACGAAGAAGGAAAAACTCCCCTACATATTGCAGCAAGCAAAG
GACATCTTGAAATTCTTTTACTTCTACT
Run BLAST on NCBI

protein sequence of TCONS_00004897-protein

>TCONS_00004897-protein ID=TCONS_00004897-protein|Name=TCONS_00004897-protein|organism=Clytia hemisphaerica|type=polypeptide|length=417bp
MKRNFESIKLDDDEDDDVLIVSSYKRDQQNPASQPSTTALTSATPATSST
ITTITTSIPKTITITLGSSLKAPSSATNTLPGPSSLSHPPFRPVQVFAGP
SSIRSGLMSFNPGSSASSPKSSFLINSIRMGPPYPSGIRNRIPVRPPVQK
FQPGPARPMSFRHRFFNPQETSQPYVSTIDLLDTDSSGGPSTDHSSDGED
DNASTSSNTNDAPPESTQSKKSTLIDSSKKVSPDQKTKSSGMRSSASSKI
IEPIIIEDSPPSSPSYSPECSPPHTSEDQVKPTQNKKVKVGMGITYGAQA
EPQVDAISKETERMLQNLLPSEESGENDEELSNLLKTGMNMIDPEDLLQK
MKQLPNDKPKRLYIKGLYSQAKHGNIPRVLSFLYGGTNPCGIVKNEEGKT
PLHIAASKGHLEILLLL
Run BLAST on NCBI

transcript from alignment at sc0000049:142176..145284-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004897 ID=TCONS_00004897|Name=TCONS_00004897|organism=Clytia hemisphaerica|type=transcript|length=3109bp|location=Sequence derived from alignment at sc0000049:142176..145284- (Clytia hemisphaerica)
ATTAATACAATTAATTAAAGAGCGTGGTATCAAAGGTATCCACGTAACCA
TTTATTGATTGAATTGGGGCAAAAAAGGGTACACCAATAACTTATATACC
CAGAATTGATGTACCAGTGGGGTTTCTGAAAATAACCTCTGTAGAAAACA
TTCTTTATTATTAACTATTGTTTTTGCTGACAGATATCTAATAATATTTT
TGTCAAATCCACAACTCATTTCAAGATGAAGAGAAATTTTGAGTCCATCA
AGCTTGACGATGATGAAGACGATGACGGTTTGATTTAAACTTTTGTCACT
TTTGTTAAGGTTTCTTTTCTTGTGCCTCAAGAGTTTTCTAGCAAAATTGG
TAACTGAACTATTGGTAAATGAACCGTTAAAAATATTTTAGATTTTTTTT
TTTCAACGTAAGATAACGAGCTTATTTTGATTTTCTTATAAAAAAATTGA
TTCGTAAAACATGAGCTTTACTAGTTATATGAAATTAATATCTGGATAAG
CAATGCAATCCATAACATTAAAACTTACGTCTTTTTTCAGTCTTAATTGT
GAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCACAGCCAAGCACTA
CAGCATTGACATCTGCAACACCAGCAACATCATCTACCATAACAACTATC
ACCACTTCGATCCCTAAAACAATAACAATTACACTTGGGTCTTCTTTAAA
GGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCGTCGAGCCTTTCCC
ATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCCATCAAGTATACGC
AGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCTCTTCCCCTAAGTC
ATCTTTCTTAATCAACTCCATCAGAATGGGACCACCGTATCCATCAGGCA
TCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAAGTTCCAACCTGGT
CCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCAATCCTCGTAAATC
AATTTCTTCATTTTTAATTGTTGATTTCTTGCATTTATTTCTTCTGTAGT
TTTTTATTATTTTACAGCAAGATTGGAAACACATTTTTGCGAATTATTTT
TTGTCAACTCAGGTCAACTGTATTTGATTATTTATCAGGAGTTGTTCAAA
CTTTTCCATTATTTTCTCGATAGAAGAAACATCGCAACCATACGTGTCAA
CAATTGATTTATTGGATACTGACTCAAGTGGTGGTCCATCTACTGATCAC
AGTTCTGATGGTGGTAAGTTTAGAAAAATTAATTAATTGCAATATTGGCT
CTTTTTTATTATTTTGAAGTTCTTAAAACACAATTTAAAACCAGCTTTAT
AAAATGTGAAAATGGCTCTATTGTCTTAAATTTATGTATTGACTCTTTCA
TTACTTTACTAAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAAT
GATGCACCGCCTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTC
GAGTAAAAAAGTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGAT
CGTCAGCATCGTCAAAAAGTAAGTATTAAAGAAATTTCATAAAAAATTAC
TCAATACATAACCTTTGTTCTTTCAGAGGATTAAAGAATTATTTGCTTTT
TCTTCTAGTAATCGAACCAATCATCATCGAGGATTCCCCACCGAGCAGTC
CCTCTTACAGCCCAGAATGCAGTCCACCTCACACCAGTGAAGATCAAGTC
AAACCTACACAAAATAAGAAAGGTGTGGTATTTTCAGCTACCTAATTCTT
CTTAGCCGTTTGATTGGTATTATTGTAACAATACAGCAAATCAACCTTTT
ACGTATGACAATTCAAAAATCATTTTAATCAGATGTTTACACCATAAATT
ATTTTTTAAACAAAAATTCAATTGCTTTTATTATTTTACAGTGAAAGTGG
GCATGGGAATTACATATGGAGCTCAAGCTGAACCACAAGTTGATGCCATT
AGTAAAGAAACAGAAAGGTAAGATCTATATACTTTAATGGGATAGATTTT
CCCAAAATCTAATTCCAATGGAAATTTGGAAAGGTCTTATCCACGAAATT
CTTTTGAACAAAACTAAAACAATGTCAGACAATAATTACTTTTAAAATGT
ATAAAGACAAGAAATTATAAAGATTTGTCTTCTGAAAATGCCATCCATGA
AATAAAGTTTCCTCTAAATCTTAAAATTTTGCGGATGTGCTCAACGAAAA
TTTATCCCATTAATAATTGGCTACATTGGATGACTTGCTCAAATAATGAC
AAAATCATTTTTAAATGAATTTATATTTTAATTTCATCTCATTTTTTAAG
GATGCTTCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAG
AACTATCAAATCTACTTAAAAGTAAGAAAATGCACTTAACATGTCCTTAC
CAATTTTTTAATTGCCGATTTTAGACAATGCGGTTTTTCATAATGTTTTG
AGGAAATCTTTGTGTGATTTTCCTTACTATACTTTTTGATCACCTGAAGA
TATAGTCTATTCGACCATATTTGATTTTTAAGCTGGTATGAATATGATTG
ATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGTGA
GTTTTTGTTATTATTTTCAAGTTATTGAACTCACTACACTCGCGATGAAT
CGTTCATGCAAGGCATACTTTTTAAGAATTTTGAAATATTTTTCTTTCTT
TTTCAGACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAAC
ATGGCAATATACCAAGAGTGCTTTCCTTTTTATGTAAGGGTCTTATTTCA
TCAGCAAAGTAATTGTATCGATGTGGTCTTATGTTGTTTTCCTTTAATAT
GTAGCTCATTTTGACATGAGAAGGAAAAGTATAACTTTTTTTATTTGAAA
ATATTATTCAAGCTTTGGCTATCATATGTTACGCTTTTTATTTTTTTGCA
CCTTAGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGA
AAAACTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTT
ACTTCTACT

Coding sequence (CDS) from alignment at sc0000049:142176..145284-

>TCONS_00004897 ID=TCONS_00004897|Name=TCONS_00004897|organism=Clytia hemisphaerica|type=CDS|length=12510bp|location=Sequence derived from alignment at sc0000049:142176..145284- (Clytia hemisphaerica)
ATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGAAAAACT
CCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTTACTTCT
AACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAACATGGC
AATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATGATTGATCC
AGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGATGCTTC
AAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGAACTATCA
AATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGAGCTCAAGC
TGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAATCGAACCA
ATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGCCCAGAATG
CAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACAAAATAAGA
AAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATGCACCGCCT
GAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGTAAAAAAGT
ATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTCAGCATCGT
CAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATTTATTGGAT
ACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGTGTCTT
AATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCACAGCCAA
GCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTACCATAACA
ACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTTGGGTCTTC
TTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCGTCGAGCC
TTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCCATCAAGT
ATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCTCTTCCCC
TAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACCGTATCCAT
CAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAAGTTCCAA
CCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCAATCCTCA
TGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACGATGAC
GATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGAAAAAC
TCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTTACTTC
TAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAACATGG
CAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATGATTGATC
CAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGATGCTT
CAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGAACTATC
AAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGAGCTCAAG
CTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAATCGAACC
AATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGCCCAGAAT
GCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACAAAATAAG
AAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATGCACCGCC
TGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGTAAAAAAG
TATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTCAGCATCG
TCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATTTATTGGA
TACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGTGTCT
TAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCACAGCCA
AGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTACCATAAC
AACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTTGGGTCTT
CTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCGTCGAGC
CTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCCATCAAG
TATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCTCTTCCC
CTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACCGTATCCA
TCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAAGTTCCA
ACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCAATCCTC
ATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACGATGA
CGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGAAAAA
CTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTTACTT
CTAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAACATG
GCAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATGATTGAT
CCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGATGCT
TCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGAACTAT
CAAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGAGCTCAA
GCTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAATCGAAC
CAATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGCCCAGAA
TGCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACAAAATAA
GAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATGCACCGC
CTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGTAAAAAA
GTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTCAGCATC
GTCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATTTATTGG
ATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGTGTC
TTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCACAGCC
AAGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTACCATAA
CAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTTGGGTCT
TCTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCGTCGAG
CCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCCATCAA
GTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCTCTTCC
CCTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACCGTATCC
ATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAAGTTCC
AACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCAATCCT
CATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACGATG
ACGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGAAAA
ACTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTTACT
TCTAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAACAT
GGCAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATGATTGA
TCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGATGC
TTCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGAACTA
TCAAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGAGCTCA
AGCTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAATCGAA
CCAATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGCCCAGA
ATGCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACAAAATA
AGAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATGCACCG
CCTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGTAAAAA
AGTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTCAGCAT
CGTCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATTTATTG
GATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGTGT
CTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCACAGC
CAAGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTACCATA
ACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTTGGGTC
TTCTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCGTCGA
GCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCCATCA
AGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCTCTTC
CCCTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACCGTATC
CATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAAGTTC
CAACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCAATCC
TCATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACGAT
GACGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGAAA
AACTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTTAC
TTCTAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAACA
TGGCAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATGATTG
ATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGATG
CTTCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGAACT
ATCAAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGAGCTC
AAGCTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAATCGA
ACCAATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGCCCAG
AATGCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACAAAAT
AAGAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATGCACC
GCCTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGTAAAA
AAGTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTCAGCA
TCGTCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATTTATT
GGATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGTG
TCTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCACAG
CCAAGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTACCAT
AACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTTGGGT
CTTCTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCGTCG
AGCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCCATC
AAGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCTCTT
CCCCTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACCGTAT
CCATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAAGTT
CCAACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCAATC
CTCATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACGA
TGACGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGAA
AAACTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTTA
CTTCTAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAAC
ATGGCAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATGATT
GATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGAT
GCTTCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGAAC
TATCAAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGAGCT
CAAGCTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAATCG
AACCAATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGCCCA
GAATGCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACAAAA
TAAGAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATGCAC
CGCCTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGTAAA
AAAGTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTCAGC
ATCGTCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATTTAT
TGGATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGGT
GTCTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCACA
GCCAAGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTACCA
TAACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTTGGG
TCTTCTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCGTC
GAGCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCCAT
CAAGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCTCT
TCCCCTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACCGTA
TCCATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAAGT
TCCAACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCAAT
CCTCATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGACG
ATGACGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGGA
AAAACTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTTT
ACTTCTAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAAA
CATGGCAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATGAT
TGATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAGA
TGCTTCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGAA
CTATCAAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGAGC
TCAAGCTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAATC
GAACCAATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGCCC
AGAATGCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACAAA
ATAAGAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATGCA
CCGCCTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGTAA
AAAAGTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTCAG
CATCGTCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATTTA
TTGGATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATGG
TGTCTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCAC
AGCCAAGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTACC
ATAACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTTGG
GTCTTCTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCGT
CGAGCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCCA
TCAAGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCTC
TTCCCCTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACCGT
ATCCATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAAG
TTCCAACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCAA
TCCTCATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGAC
GATGACGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAGG
AAAAACTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTTT
TACTTCTAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAAA
ACATGGCAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATGA
TTGATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAAG
ATGCTTCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAGA
ACTATCAAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGAG
CTCAAGCTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAAT
CGAACCAATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGCC
CAGAATGCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACAA
AATAAGAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATGC
ACCGCCTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGTA
AAAAAGTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTCA
GCATCGTCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATTT
ATTGGATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGATG
GTGTCTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATCA
CAGCCAAGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTAC
CATAACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTTG
GGTCTTCTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCCG
TCGAGCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGCC
ATCAAGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCCT
CTTCCCCTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACCG
TATCCATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAAA
GTTCCAACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTCA
ATCCTCATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAGA
CGATGACGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAAG
GAAAAACTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCTT
TTACTTCTAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCAA
AACATGGCAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATATG
ATTGATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATAA
GATGCTTCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAAG
AACTATCAAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGGA
GCTCAAGCTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTAA
TCGAACCAATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAGC
CCAGAATGCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACACA
AAATAAGAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGATG
CACCGCCTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAGT
AAAAAAGTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGTC
AGCATCGTCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGATT
TATTGGATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGAT
GGTGTCTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCATC
ACAGCCAAGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCTA
CCATAACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACTT
GGGTCTTCTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGCC
GTCGAGCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGGC
CATCAAGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGCC
TCTTCCCCTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCACC
GTATCCATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAAA
AGTTCCAACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTTC
AATCCTCATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAAG
ACGATGACGATGGTGGTACGAACCCTTGTGGAATCGTCAAAAACGAAGAA
GGAAAAACTCCCCTACATATTGCAGCAAGCAAAGGACATCTTGAAATTCT
TTTACTTCTAACCAAAACGTTTGTACATCAAGGGGTTGTATTCGCAAGCA
AAACATGGCAATATACCAAGAGTGCTTTCCTTTTTATCTGGTATGAATAT
GATTGATCCAGAAGATTTGCTTCAAAAGATGAAGCAATTACCAAATGATA
AGATGCTTCAAAATTTGTTACCAAGTGAAGAAAGTGGTGAAAATGATGAA
GAACTATCAAATCTACTTAAAATGAAAGTGGGCATGGGAATTACATATGG
AGCTCAAGCTGAACCACAAGTTGATGCCATTAGTAAAGAAACAGAAAGTA
ATCGAACCAATCATCATCGAGGATTCCCCACCGAGCAGTCCCTCTTACAG
CCCAGAATGCAGTCCACCTCACACCAGTGAAGATCAAGTCAAACCTACAC
AAAATAAGAAAGAGGATGACAATGCAAGCACATCGTCAAACACTAATGAT
GCACCGCCTGAATCAACTCAAAGTAAAAAATCCACTCTTATTGACTCGAG
TAAAAAAGTATCACCTGATCAAAAGACAAAGAGTTCCGGAATGAGATCGT
CAGCATCGTCAAAAAAAGAAACATCGCAACCATACGTGTCAACAATTGAT
TTATTGGATACTGACTCAAGTGGTGGTCCATCTACTGATCACAGTTCTGA
TGGTGTCTTAATTGTGAGCTCTTATAAAAGAGACCAACAGAATCCTGCAT
CACAGCCAAGCACTACAGCATTGACATCTGCAACACCAGCAACATCATCT
ACCATAACAACTATCACCACTTCGATCCCTAAAACAATAACAATTACACT
TGGGTCTTCTTTAAAGGCACCTTCTAGTGCAACAAATACGCTACCTGGGC
CGTCGAGCCTTTCCCATCCTCCATTTAGACCAGTGCAAGTTTTTGCAGGG
CCATCAAGTATACGCAGTGGTTTGATGTCTTTCAATCCTGGATCATCTGC
CTCTTCCCCTAAGTCATCTTTCTTAATCAACTCCATCAGAATGGGACCAC
CGTATCCATCAGGCATCAGAAATCGTATTCCTGTTCGACCCCCTGTTCAA
AAGTTCCAACCTGGTCCAGCTAGGCCGATGAGCTTCAGGCACAGATTCTT
CAATCCTCATGAAGAGAAATTTTGAGTCCATCAAGCTTGACGATGATGAA
GACGATGACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002772XLOC_002772Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004897-proteinTCONS_00004897-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004897-exon-sc0000049-1575043694:145008..145284TCONS_00004897-exon-sc0000049-1575043694:145008..145284Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:144292..144744TCONS_00004897-exon-sc0000049-1575043694:144292..144744Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:144022..144111TCONS_00004897-exon-sc0000049-1575043694:144022..144111Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:143717..143869TCONS_00004897-exon-sc0000049-1575043694:143717..143869Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:143513..143626TCONS_00004897-exon-sc0000049-1575043694:143513..143626Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:143268..143343TCONS_00004897-exon-sc0000049-1575043694:143268..143343Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:142864..142934TCONS_00004897-exon-sc0000049-1575043694:142864..142934Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:142639..142702TCONS_00004897-exon-sc0000049-1575043694:142639..142702Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:142452..142528TCONS_00004897-exon-sc0000049-1575043694:142452..142528Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1575043694:142176..142278TCONS_00004897-exon-sc0000049-1575043694:142176..142278Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:145008..145284TCONS_00004897-exon-sc0000049-1510915933:145008..145284Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:144292..144744TCONS_00004897-exon-sc0000049-1510915933:144292..144744Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:144022..144111TCONS_00004897-exon-sc0000049-1510915933:144022..144111Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:143717..143869TCONS_00004897-exon-sc0000049-1510915933:143717..143869Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:143513..143626TCONS_00004897-exon-sc0000049-1510915933:143513..143626Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:143268..143343TCONS_00004897-exon-sc0000049-1510915933:143268..143343Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:142864..142934TCONS_00004897-exon-sc0000049-1510915933:142864..142934Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:142639..142702TCONS_00004897-exon-sc0000049-1510915933:142639..142702Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:142452..142528TCONS_00004897-exon-sc0000049-1510915933:142452..142528Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1510915933:142176..142278TCONS_00004897-exon-sc0000049-1510915933:142176..142278Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:145008..145284TCONS_00004897-exon-sc0000049-1491911889:145008..145284Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:144292..144744TCONS_00004897-exon-sc0000049-1491911889:144292..144744Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:144022..144111TCONS_00004897-exon-sc0000049-1491911889:144022..144111Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:143717..143869TCONS_00004897-exon-sc0000049-1491911889:143717..143869Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:143513..143626TCONS_00004897-exon-sc0000049-1491911889:143513..143626Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:143268..143343TCONS_00004897-exon-sc0000049-1491911889:143268..143343Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:142864..142934TCONS_00004897-exon-sc0000049-1491911889:142864..142934Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:142639..142702TCONS_00004897-exon-sc0000049-1491911889:142639..142702Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:142452..142528TCONS_00004897-exon-sc0000049-1491911889:142452..142528Clytia hemisphaericaexon
TCONS_00004897-exon-sc0000049-1491911889:142176..142278TCONS_00004897-exon-sc0000049-1491911889:142176..142278Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:142176..145284 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.63444	2.9989	0.917984	0.960042	13.3465	10.6061	10.0282	11.9457	7.44465	8.52105	7.10943	5.60443	6.45194	5.65769	6.01664	6.61011	7.36658	6.43191	3.4177	3.98067	4.59521	4.07404	5.54555	6.49886	6.78372	7.25981	2.03175	1.51375	4.62352	5.72232
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004897 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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