TCONS_00004760 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004760
Unique NameTCONS_00004760
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3485

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004760 ID=TCONS_00004760|Name=TCONS_00004760|organism=Clytia hemisphaerica|type=transcript|length=3485bp
GTTGAATTGGTTTTTAATACACTTATCAACGCTTAAATCGTGAAAGGGCT
GGGCATTTACCTAGTTTGTTAAAGTTGTTTCATAATTTTCTATTTATAAT
TTTGgctattgcaatgtcttctggcaTTACATCATAGGCCCAATAGCTGA
TTAGTTGTAAGTGGCATAAAGCccgtcaatacgtcactttcaaccaatca
gctggcGGGTTCATCCatgattgacgtcaaaagacGGTTTACTATTTTGA
CGTTATTTCATGGTAAGGTGTAAAGTattcttcattttgattttcatttt
cttctagggactaaataaaaaataatcatgGCACCTAGGGcgtgcacccc
ctgccaggcggGATATTTTCTCAGTAAAATGTGCACAAGTAGCTCAGATA
CAGTATGTCGGCTCTGTGCCGACAATTTTTTTAATCCCAATGTTGGCTTT
TCAAAGACCTGTAATAGATGTTCACCTTGTAAAAGGAATGAACACATCGA
CAAGCCGTGCACCCCAATAAGTGATGTAGTTTGTAAATGCGAGAAGCAAA
ATCACATTTACGACAAATTTAAACCGTGTCAGGCGTGTCCAAAGggcACA
GTTGTGATCAACAATAAATGTGCGAATGAAACTTCATTTTTCACGACGAG
ACAACCCACCACTAATAATAACAGCCAAGTTCATTCGAAAGTGATCGCAC
TCAGTATTGGACTCGGTGTAATAGCAATTGTCGTCTCAATTATAGTGGCT
TTGTGTTGTTATTACAGTCGTCGGCGTAGAAGGCATCTTCCTCCGATAGA
TGatgCACCTTCAGAAGCCAACGAAGTAGAAACGAACGAAAAACTACATA
TTAAAGCACCTAGATCTCCACCTAAAGaaaacgtTTACTCTGCAATTCCG
CTGAACGTGAAAGACGATAAACGAATATGTTCGCACCAGCTGCCGTTTTC
ATTGGTCCACGAACTTGGGGGCCTCTTAGCAGCCTCGCACTCGAAGAATT
ATAAGCACCTCGCGGACAAGCTTGGCTATAAATATTCATTTATTAAAAGA
CTAGAATCCTCGGAAGATCCTGTTGAGGCTCTTCTTGATGATTATGTAAC
GGGGGAAAACCCCACTAAAGAACAATTATATTCTTCACTTTTGGCGATTG
GTCGGCCGGACGCTGCAAAGGTGGTTATGGATGAGCTCTAAAATCATCAG
AAAATGAACCGAATAGTTTTATGTTGAATAACCAGGGTGTCGCGAATCAA
GTTGCATTCGTATGTCATTTTTTGGAATCGATTCCTGTTTTGGTTTGAAT
ATTGAGATCTTTGACAATCAACATGATTATTATATGATACCGATCATAAA
TTGGATGCGAATGAGATTGTTTTCGAAACACCTTTGGCTATGTCATGCTT
AAATAATGAAGCTTTTAGAGTTCGTCCATGGCTTTCTTTGTGGTTGTTCA
ATATGTCAGTAAAAAGAAAGATTGAGGCACCATCTccaatagtttataac
aaattATATACTTTAAGTGAATTTTAGtgagaaaaaaaacacgaaaaaat
tacattcaaattttttgatgaaaaatggccGAATTTGTAATTCACGGGTT
CTAATTTAATTAATAATTTAGGTTTCTAATATATAGTCTTTGgtatgaaa
aatatataaaaagattTGCGACAAAATTGTACTGTATTTGTAACTAACGC
GATGAAGATGAGATGTTATCAGGTTTAGGcttaaaattgaaaagtttgac
AGATTTATTTGGGGCTAATAATTTGGTTCATTTTTGGAAATGGTGTCTTC
AAAAATAATAAACTTAAacgtcatttttttttaaaaaagagaaatttatc
caaattttatattataataGTATCTACATATTAGTGCATAAGAAAATTAA
cttattattcaattttttttcccatATTTTCTGGCTTTTTTTTATACACG
AAggaattttagaaaacattatAGTAACGTTACTACGAAGGACAAACATC
CtctttttttgtatgaaaacttTATATTAGTATTTATTAAATAATGTGCC
TGGCTAGTCCTTTTTAATCCCAAGGTATTTTACGTCTGAATCCAGATATA
TTTTGTGTCCTTTATTGAAATAACTCTTACTCAAAACTAATTTGACCATT
GATAAAATGAAATGACACAGTGCCATTTTAATGTAAACTACCTTGGAATA
GAGACTTCTCtctaatgtttttctttttgctttttacCAAAACTAAACCT
ATATTCTTAACATGAACCTATATTTGTGGATTGGGGCCTGCCCAAAAATT
GTGAAATGTCATCTAGGACCTCTTGAAATCTGATACAAAGGATGATTTTC
AAGTATGCAACAATAACAACCTTTTAAATAGGTTCTTGTTATGGCTAAGG
CTAAATTTTTGGCACCATGTTAATCCTTTCCATCAAAAACTTTGCTCGAA
ACTTTTTAACCCTTCATTTTTGCAACCTCTTCTTTTCTACCGTTTTTcta
ctctttttttttcttagatctttttttttcaactttagtTTTTATGCCAG
TCGGAATAAAGATGACAGAGTTATCTTATGTTCTGCTTTAAATTTTGTTt
gtcttgtttgtttttttgtttttttgtaaatttaacttatttaactttcg
ttttttgTAGTAAGCATTTTTTATTACGTAATGATGTTATCTTACAAACG
AAATCAGCCCCGGGTGTTTTGCTTGAAGTGTTACGTCATTGATATAATCC
CTGTTACCATACATACAGAaaacgggggtccccgaacgGTCCCCTGGACC
TGGACCGGGAATAATGGCATGCTTTACATATCTAAATTGAAGTGTTCTTA
GACATGATAACTAGATAATTCCCTAGTTTTAAGGTTGacctaaaaataat
tattcatttGTCAGAAATTTTAACGAGCCTCTCTTATAGACCCGAAAATT
TCCCTGTATTCTTTTGTAAAATAATCGTCTTTGTTATTCTGTTTGGAAAA
TTTGTTATTTAGCNTAGTAAGCATTTTTTATTACGTAATGATGTAATCTT
ACAAACGAAATCAGCCCCGGGTGTTTTGCTTGAAGTGTTACGTCATTGAT
ATAATCCCTGTTACCATACATACAGAaaacgggggtccccgaacgGTCCC
CTGGACCTGGACCGGGAATAATGGCATGCTTTACATATCTAAATTGAAGT
GTTCTTAGACATGATAACTAGATAATTCCCTAGTTTTAAGGTTGacctaa
aaataattattcatttGTCAGAAATTTTAACGAGCCTCTCTTATAGACCC
GAAAATTTCCCTGTATTCTTTTGTAAAATAATCGTCTTTGTTATTCTGTC
TGGAAAATTTGTTATTTagcttttaaaatttattaattatATTAGATTAT
TTCATGACTATTGTGAGATTTGAAACAGTTTTCCTGAAATCTTTTATGCA
AATATCACCCACGAGtatttgaatgaatatttttg
Run BLAST on NCBI

protein sequence of TCONS_00004760-protein

>TCONS_00004760-protein ID=TCONS_00004760-protein|Name=TCONS_00004760-protein|organism=Clytia hemisphaerica|type=polypeptide|length=287bp
MAPRACTPCQAGYFLSKMCTSSSDTVCRLCADNFFNPNVGFSKTCNRCSP
CKRNEHIDKPCTPISDVVCKCEKQNHIYDKFKPCQACPKGTVVINNKCAN
ETSFFTTRQPTTNNNSQVHSKVIALSIGLGVIAIVVSIIVALCCYYSRRR
RRHLPPIDDAPSEANEVETNEKLHIKAPRSPPKENVYSAIPLNVKDDKRI
CSHQLPFSLVHELGGLLAASHSKNYKHLADKLGYKYSFIKRLESSEDPVE
ALLDDYVTGENPTKEQLYSSLLAIGRPDAAKVVMDEL
Run BLAST on NCBI

transcript from alignment at sc0000048:524575..530315+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004760 ID=TCONS_00004760|Name=TCONS_00004760|organism=Clytia hemisphaerica|type=transcript|length=5741bp|location=Sequence derived from alignment at sc0000048:524575..530315+ (Clytia hemisphaerica)
GTTGAATTGGTTTTTAATACACTTATCAACGCTTAAATCGTGAAAGGGCT
GGGCATTTACCTAGTTTGTTAAAGTTGTTTCATAATTTTCTATTTATAAT
TTTGgctattgcaatgtcttctggcaTTACATCATAGGCCCAATAGCTGA
TTAGTTGTAAGTGGCATAAAGCccgtcaatacgtcactttcaaccaatca
gctggcGGGTTCATCCatgattgacgtcaaaagacGGTTTACTATTTTGA
CGTTATTTCATGGTAAGGTGTAAAGTattcttcattttgattttcatttt
cttctagggactaaataaaaaataatcatgGCACCTAGGGcgtgcacccc
ctgccaggcggGATATTTTCTCAGTAAAATGTGCACAAGTAGCTCAGATA
CAGTATGTCGGCTCTGTGCCGACAATTTTTTTAATCCCAATGTTGGCTTT
TCAAAGACCTGTAATAGGTACGTTTGTCTTTTTTTACGATTGACGGTCAA
TTAATCATATGTTCATTAAGTCCTAGAAGTACAAATATTATGTGACACGA
TTcgctaaaataatttttgtgatAATTATAACACAAAACTGGTTTGATGG
ACTGAAAATTTACTTTTAATTCTTAGATGTTCACCTTGTAAAAGGAATGA
ACACATCGACAAGCCGTGCACCCCAATAAGTGATGTAGTTTGTAAATGCG
AGAAGCAAAATCACATTTACGACAAATTTAAACCGTGTCAGGCGTGTCCA
AAGGTTTGTATAGTCTGTTTACTTTCATTTGGATAatgctttttttcata
aactcccaattttatcgttttttttaATCTCTTTTTCAAACTATAATATA
CTCCATTTTTCGAACTCTCAGAGTTGTTTATAGAAAACTTTACCCGGtct
aaaatcttcttttttcaaattttcagggcACAGTTGTGATCAACAATAAA
TGTGCGAATGAAACTTCATTTTTCACGACGAGACAACCCACCACTAATAA
TAACAGCCAAGGTAGTTAAAAATTGCCCCGCGATGTAGAAATCCAGGCTT
GATTCTCACCTACCTTTTGGTAAACAGATATGGAAGAGAGAGGGTAGCTA
GAAATTCTAATTTTAACTTCCCTTAAGTGTTTAATTACGAGGGGCAGATT
GAAGacttatttcaaatattttaaggCAATGGTTGGCAGATCTTGAGATT
TGTCTTCACTCTAGGAACTTTCTTGACATTGGTTTCTTGTAgttattatc
aaaatttcattctttaGACTTTTGTGTTAACTATTATTACCTTCCCTTAT
TTTTGCTtcatttaaatgtgatttttttctgttatAGTTCATTCGAAAGT
GATCGCACTCAGTATTGGACTCGGTGTAATAGCAATTGTCGTCTCAATTA
TAGTGGCTTTGTGTTGTTATTACAGTATGTTTTTCAAATGAATATAatta
ttcttcaattttttaattgtttttcaatatttattcttTCGCGGGTCCTT
CACcccaaaaagaaaataaatttcaggGGACTAATATTCAGAATTCGACC
GGACCCAATCAATAGAGTATCCGCATTTTGACTAACCAAAAACAAGTTGC
TGCAAGAACTGTTTATTCGTTGATGAATTCTGTACTAATTTTCTTCTTAT
TATTATTCGTCATTCTAGGTCGTCGGCGTAGAAGGCATCTTCCTCCGATA
GATGGTAAGTTATCCTATGTGTCATGGGAAAGTTAAACACATATTGAAAA
TTTCGTAAACCTTTCCAATAACTTGAAAAATCCCCTTAAAAAGTCGTTGT
CTCACAGTAATAAAAACTCTTACACATACGTTTATTCCGACTCAGCGTCA
ACATAAAAcatatgagcaatctgattggttttaaAAACGcatacataaat
gctgtatttcatattgtaccgtacaaatacaagaccgaCCGCGTTCAAAA
AGGGGTCCAATTCCAATTTCTATAGAGACTAACCCCTTTGCAGATTGAGT
TTCATAGTTATATGTTCTTGTTTAAtacgtttctttttattttctagatg
CACCTTCAGAAGCCAACGAAGTAGAAACGAACGAAAAACTACATATTAAA
GCACCTAGATCTCCACCTAAAGGTATGAACTAGAAACTCTGCAAATTTGT
TCAATTAAATCAAAGGCAGGGTAAAATTTCAGAGAGAAATACTTGTAGAT
AAAGTGTCTGCAATAAAAAACGAAAGAATTGTCCTAGCACTTTGTACTAT
TGTCaaccaaaaaaaagatttcctttGAAACTTTActgaatgattaaaaa
atactGAATGGTAAAtaataaatagtttttttttttttttcagaaaacgt
TTACTCTGCAATTCCGCTGAACGGTAAGAAGCCTTTCTTTCGATTATTTG
TTAAAAGGAATAACCAGATAGAAATTAGAACTTAAATTTAAAGATTCCTC
CCTTGGTCCTTAGTAAGACCAccaaatatttttcagaaaaaaaaacattt
tgaagaaaGTTATATGAGGATTTGAAATCTGAGATTTtcacgttgaaatt
ctattattttcaagcagaacctaaaaattacaaacctaaatatcttgaat
ttgaaaagcaaaTAGCAAGTGAAATTTTGAGGTTCTGTTAAGGGCTATGG
AAGGattcttttgattgaattttttttttctggtaatCCCTTTAAATAAG
ATTGAAGATTTCTGcaacaaaatttttgacgttgtTTTATCTAGAAAATT
GAATGCTGGGCTGGAGAACAATGAAtcccaaaaaaatgtttttgttttcg
gCGGTTTTAATTTTGATAGATTACGAAAGAGTATCAATACCTTTAAGAGA
ATAagttttggcgagaattaattttagcgaacgacccatttttgttcaat
attttagctgagAAAAGAGGAAAAAGGAGTTTTTAGGAGAAATTAatact
aaattgaaagaaacttgaatttggcgagaatttattttggcaaatgacct
ataaatttaaatttagcggaaagaaattttggcgaaattttcaggcaatt
cgccaaattcaccaaaattctttcccttaaggtagattCCCTAAGACGAC
CTTTTGGTTTGCTTTTTATTAAGCTCCGAAGTTCATCAAAAAGTTAATCT
TCTTCTTTTATAGTGAAAGACGATAAACGAATATGTTCGCACCAGCTGCC
GTTTTCATTGGTCCACGAACTTGGGGGCCTCTTAGCAGCCTCGCACTCGA
AGAATTATAAGCACCTCGCGGACAAGCTTGGCTATAAATATTCATTTATT
AAAAGACTAGAATCCTCGGAAGATCCTGTTGAGGCTCTTCTTGATGATTA
TGTAACGGGGGAAAACCCCACTAAAGAACAATTATATTCTTCACTTTTGG
CGATTGGTCGGCCGGACGCTGCAAAGGTGGTTATGGATGAGCTCTAAAAT
CATCAGAAAATGAACCGAATAGTTTTATGTTGAATAACCAGGGTGTCGCG
AATCAAGTTGCATTCGTATGTCATTTTTTGGAATCGATTCCTGTTTTGGT
TTGAATATTGAGATCTTTGACAATCAACATGATTATTATATGATACCGAT
CATAAATTGGATGCGAATGAGATTGTTTTCGAAACACCTTTGGCTATGTC
ATGCTTAAATAATGAAGCTTTTAGAGTTCGTCCATGGCTTTCTTTGTGGT
TGTTCAATATGTCAGTAAAAAGAAAGATTGAGGCACCATCTccaatagtt
tataacaaattATATACTTTAAGTGAATTTTAGtgagaaaaaaaacacga
aaaaattacattcaaattttttgatgaaaaatggccGAATTTGTAATTCA
CGGGTTCTAATTTAATTAATAATTTAGGTTTCTAATATATAGTCTTTGgt
atgaaaaatatataaaaagattTGCGACAAAATTGTACTGTATTTGTAAC
TAACGCGATGAAGATGAGATGTTATCAGGTTTAGGcttaaaattgaaaag
tttgacAGATTTATTTGGGGCTAATAATTTGGTTCATTTTTGGAAATGGT
GTCTTCAAAAATAATAAACTTAAacgtcatttttttttaaaaaagagaaa
tttatccaaattttatattataataGTATCTACATATTAGTGCATAAGAA
AATTAActtattattcaattttttttcccatATTTTCTGGCTTTTTTTTA
TACACGAAggaattttagaaaacattatAGTAACGTTACTACGAAGGACA
AACATCCtctttttttgtatgaaaacttTATATTAGTATTTATTAAATAA
TGTGCCTGGCTAGTCCTTTTTAATCCCAAGGTATTTTACGTCTGAATCCA
GATATATTTTGTGTCCTTTATTGAAATAACTCTTACTCAAAACTAATTTG
ACCATTGATAAAATGAAATGACACAGTGCCATTTTAATGTAAACTACCTT
GGAATAGAGACTTCTCtctaatgtttttctttttgctttttacCAAAACT
AAACCTATATTCTTAACATGAACCTATATTTGTGGATTGGGGCCTGCCCA
AAAATTGTGAAATGTCATCTAGGACCTCTTGAAATCTGATACAAAGGATG
ATTTTCAAGTATGCAACAATAACAACCTTTTAAATAGGTTCTTGTTATGG
CTAAGGCTAAATTTTTGGCACCATGTTAATCCTTTCCATCAAAAACTTTG
CTCGAAACTTTTTAACCCTTCATTTTTGCAACCTCTTCTTTTCTACCGTT
TTTctactctttttttttcttagatctttttttttcaactttagtTTTTA
TGCCAGTCGGAATAAAGATGACAGAGTTATCTTATGTTCTGCTTTAAATT
TTGTTtgtcttgtttgtttttttgtttttttgtaaatttaacttatttaa
ctttcgttttttgTAGTAAGCATTTTTTATTACGTAATGATGTTATCTTA
CAAACGAAATCAGCCCCGGGTGTTTTGCTTGAAGTGTTACGTCATTGATA
TAATCCCTGTTACCATACATACAGAaaacgggggtccccgaacgGTCCCC
TGGACCTGGACCGGGAATAATGGCATGCTTTACATATCTAAATTGAAGTG
TTCTTAGACATGATAACTAGATAATTCCCTAGTTTTAAGGTTGacctaaa
aataattattcatttGTCAGAAATTTTAACGAGCCTCTCTTATAGACCCG
AAAATTTCCCTGTATTCTTTTGTAAAATAATCGTCTTTGTTATTCTGTTT
GGAAAATTTGTTATTTAGCNTAGTAAGCATTTTTTATTACGTAATGATGT
AATCTTACAAACGAAATCAGCCCCGGGTGTTTTGCTTGAAGTGTTACGTC
ATTGATATAATCCCTGTTACCATACATACAGAaaacgggggtccccgaac
gGTCCCCTGGACCTGGACCGGGAATAATGGCATGCTTTACATATCTAAAT
TGAAGTGTTCTTAGACATGATAACTAGATAATTCCCTAGTTTTAAGGTTG
acctaaaaataattattcatttGTCAGAAATTTTAACGAGCCTCTCTTAT
AGACCCGAAAATTTCCCTGTATTCTTTTGTAAAATAATCGTCTTTGTTAT
TCTGTCTGGAAAATTTGTTATTTagcttttaaaatttattaattatATTA
GATTATTTCATGACTATTGTGAGATTTGAAACAGTTTTCCTGAAATCTTT
TATGCAAATATCACCCACGAGtatttgaatgaatatttttg

Coding sequence (CDS) from alignment at sc0000048:524575..530315+

>TCONS_00004760 ID=TCONS_00004760|Name=TCONS_00004760|organism=Clytia hemisphaerica|type=CDS|length=6912bp|location=Sequence derived from alignment at sc0000048:524575..530315+ (Clytia hemisphaerica)
atgGCACCTAGGGcgtgcaccccctgccaggcggGATATTTTCTCAGTAA
AATGTGCACAAGTAGCTCAGATACAGTATGTCGGCTCTGTGCCGACAATT
TTTTTAATCCCAATGTTGGCTTTTCAAAGACCTGTAATAGATGTTCACCT
TGTAAAAGGAATGAACACATCGACAAGCCGTGCACCCCAATAAGTGATGT
AGTTTGTAAATGCGAGAAGCAAAATCACATTTACGACAAATTTAAACCGT
GTCAGGCGTGTCCAAAGggcACAGTTGTGATCAACAATAAATGTGCGAAT
GAAACTTCATTTTTCACGACGAGACAACCCACCACTAATAATAACAGCCA
AGTTCATTCGAAAGTGATCGCACTCAGTATTGGACTCGGTGTAATAGCAA
TTGTCGTCTCAATTATAGTGGCTTTGTGTTGTTATTACAGTCGTCGGCGT
AGAAGGCATCTTCCTCCGATAGATGatgCACCTTCAGAAGCCAACGAAGT
AGAAACGAACGAAAAACTACATATTAAAGCACCTAGATCTCCACCTAAAG
aaaacgtTTACTCTGCAATTCCGCTGAACGTGAAAGACGATAAACGAATA
TGTTCGCACCAGCTGCCGTTTTCATTGGTCCACGAACTTGGGGGCCTCTT
AGCAGCCTCGCACTCGAAGAATTATAAGCACCTCGCGGACAAGCTTGGCT
ATAAATATTCATTTATTAAAAGACTAGAATCCTCGGAAGATCCTGTTGAG
GCTCTTCTTGATGATTATGTAACGGGGGAAAACCCCACTAAAGAACAATT
ATATTCTTCACTTTTGGCGATTGGTCGGCCGGACGCTGCAAAGGTGGTTA
TGGATGAGCTCTAAatgGCACCTAGGGcgtgcaccccctgccaggcggGA
TATTTTCTCAGTAAAATGTGCACAAGTAGCTCAGATACAGTATGTCGGCT
CTGTGCCGACAATTTTTTTAATCCCAATGTTGGCTTTTCAAAGACCTGTA
ATAGATGTTCACCTTGTAAAAGGAATGAACACATCGACAAGCCGTGCACC
CCAATAAGTGATGTAGTTTGTAAATGCGAGAAGCAAAATCACATTTACGA
CAAATTTAAACCGTGTCAGGCGTGTCCAAAGggcACAGTTGTGATCAACA
ATAAATGTGCGAATGAAACTTCATTTTTCACGACGAGACAACCCACCACT
AATAATAACAGCCAAGTTCATTCGAAAGTGATCGCACTCAGTATTGGACT
CGGTGTAATAGCAATTGTCGTCTCAATTATAGTGGCTTTGTGTTGTTATT
ACAGTCGTCGGCGTAGAAGGCATCTTCCTCCGATAGATGatgCACCTTCA
GAAGCCAACGAAGTAGAAACGAACGAAAAACTACATATTAAAGCACCTAG
ATCTCCACCTAAAGaaaacgtTTACTCTGCAATTCCGCTGAACGTGAAAG
ACGATAAACGAATATGTTCGCACCAGCTGCCGTTTTCATTGGTCCACGAA
CTTGGGGGCCTCTTAGCAGCCTCGCACTCGAAGAATTATAAGCACCTCGC
GGACAAGCTTGGCTATAAATATTCATTTATTAAAAGACTAGAATCCTCGG
AAGATCCTGTTGAGGCTCTTCTTGATGATTATGTAACGGGGGAAAACCCC
ACTAAAGAACAATTATATTCTTCACTTTTGGCGATTGGTCGGCCGGACGC
TGCAAAGGTGGTTATGGATGAGCTCTAAatgGCACCTAGGGcgtgcaccc
cctgccaggcggGATATTTTCTCAGTAAAATGTGCACAAGTAGCTCAGAT
ACAGTATGTCGGCTCTGTGCCGACAATTTTTTTAATCCCAATGTTGGCTT
TTCAAAGACCTGTAATAGATGTTCACCTTGTAAAAGGAATGAACACATCG
ACAAGCCGTGCACCCCAATAAGTGATGTAGTTTGTAAATGCGAGAAGCAA
AATCACATTTACGACAAATTTAAACCGTGTCAGGCGTGTCCAAAGggcAC
AGTTGTGATCAACAATAAATGTGCGAATGAAACTTCATTTTTCACGACGA
GACAACCCACCACTAATAATAACAGCCAAGTTCATTCGAAAGTGATCGCA
CTCAGTATTGGACTCGGTGTAATAGCAATTGTCGTCTCAATTATAGTGGC
TTTGTGTTGTTATTACAGTCGTCGGCGTAGAAGGCATCTTCCTCCGATAG
ATGatgCACCTTCAGAAGCCAACGAAGTAGAAACGAACGAAAAACTACAT
ATTAAAGCACCTAGATCTCCACCTAAAGaaaacgtTTACTCTGCAATTCC
GCTGAACGTGAAAGACGATAAACGAATATGTTCGCACCAGCTGCCGTTTT
CATTGGTCCACGAACTTGGGGGCCTCTTAGCAGCCTCGCACTCGAAGAAT
TATAAGCACCTCGCGGACAAGCTTGGCTATAAATATTCATTTATTAAAAG
ACTAGAATCCTCGGAAGATCCTGTTGAGGCTCTTCTTGATGATTATGTAA
CGGGGGAAAACCCCACTAAAGAACAATTATATTCTTCACTTTTGGCGATT
GGTCGGCCGGACGCTGCAAAGGTGGTTATGGATGAGCTCTAAatgGCACC
TAGGGcgtgcaccccctgccaggcggGATATTTTCTCAGTAAAATGTGCA
CAAGTAGCTCAGATACAGTATGTCGGCTCTGTGCCGACAATTTTTTTAAT
CCCAATGTTGGCTTTTCAAAGACCTGTAATAGATGTTCACCTTGTAAAAG
GAATGAACACATCGACAAGCCGTGCACCCCAATAAGTGATGTAGTTTGTA
AATGCGAGAAGCAAAATCACATTTACGACAAATTTAAACCGTGTCAGGCG
TGTCCAAAGggcACAGTTGTGATCAACAATAAATGTGCGAATGAAACTTC
ATTTTTCACGACGAGACAACCCACCACTAATAATAACAGCCAAGTTCATT
CGAAAGTGATCGCACTCAGTATTGGACTCGGTGTAATAGCAATTGTCGTC
TCAATTATAGTGGCTTTGTGTTGTTATTACAGTCGTCGGCGTAGAAGGCA
TCTTCCTCCGATAGATGatgCACCTTCAGAAGCCAACGAAGTAGAAACGA
ACGAAAAACTACATATTAAAGCACCTAGATCTCCACCTAAAGaaaacgtT
TACTCTGCAATTCCGCTGAACGTGAAAGACGATAAACGAATATGTTCGCA
CCAGCTGCCGTTTTCATTGGTCCACGAACTTGGGGGCCTCTTAGCAGCCT
CGCACTCGAAGAATTATAAGCACCTCGCGGACAAGCTTGGCTATAAATAT
TCATTTATTAAAAGACTAGAATCCTCGGAAGATCCTGTTGAGGCTCTTCT
TGATGATTATGTAACGGGGGAAAACCCCACTAAAGAACAATTATATTCTT
CACTTTTGGCGATTGGTCGGCCGGACGCTGCAAAGGTGGTTATGGATGAG
CTCTAAatgGCACCTAGGGcgtgcaccccctgccaggcggGATATTTTCT
CAGTAAAATGTGCACAAGTAGCTCAGATACAGTATGTCGGCTCTGTGCCG
ACAATTTTTTTAATCCCAATGTTGGCTTTTCAAAGACCTGTAATAGATGT
TCACCTTGTAAAAGGAATGAACACATCGACAAGCCGTGCACCCCAATAAG
TGATGTAGTTTGTAAATGCGAGAAGCAAAATCACATTTACGACAAATTTA
AACCGTGTCAGGCGTGTCCAAAGggcACAGTTGTGATCAACAATAAATGT
GCGAATGAAACTTCATTTTTCACGACGAGACAACCCACCACTAATAATAA
CAGCCAAGTTCATTCGAAAGTGATCGCACTCAGTATTGGACTCGGTGTAA
TAGCAATTGTCGTCTCAATTATAGTGGCTTTGTGTTGTTATTACAGTCGT
CGGCGTAGAAGGCATCTTCCTCCGATAGATGatgCACCTTCAGAAGCCAA
CGAAGTAGAAACGAACGAAAAACTACATATTAAAGCACCTAGATCTCCAC
CTAAAGaaaacgtTTACTCTGCAATTCCGCTGAACGTGAAAGACGATAAA
CGAATATGTTCGCACCAGCTGCCGTTTTCATTGGTCCACGAACTTGGGGG
CCTCTTAGCAGCCTCGCACTCGAAGAATTATAAGCACCTCGCGGACAAGC
TTGGCTATAAATATTCATTTATTAAAAGACTAGAATCCTCGGAAGATCCT
GTTGAGGCTCTTCTTGATGATTATGTAACGGGGGAAAACCCCACTAAAGA
ACAATTATATTCTTCACTTTTGGCGATTGGTCGGCCGGACGCTGCAAAGG
TGGTTATGGATGAGCTCTAAatgGCACCTAGGGcgtgcaccccctgccag
gcggGATATTTTCTCAGTAAAATGTGCACAAGTAGCTCAGATACAGTATG
TCGGCTCTGTGCCGACAATTTTTTTAATCCCAATGTTGGCTTTTCAAAGA
CCTGTAATAGATGTTCACCTTGTAAAAGGAATGAACACATCGACAAGCCG
TGCACCCCAATAAGTGATGTAGTTTGTAAATGCGAGAAGCAAAATCACAT
TTACGACAAATTTAAACCGTGTCAGGCGTGTCCAAAGggcACAGTTGTGA
TCAACAATAAATGTGCGAATGAAACTTCATTTTTCACGACGAGACAACCC
ACCACTAATAATAACAGCCAAGTTCATTCGAAAGTGATCGCACTCAGTAT
TGGACTCGGTGTAATAGCAATTGTCGTCTCAATTATAGTGGCTTTGTGTT
GTTATTACAGTCGTCGGCGTAGAAGGCATCTTCCTCCGATAGATGatgCA
CCTTCAGAAGCCAACGAAGTAGAAACGAACGAAAAACTACATATTAAAGC
ACCTAGATCTCCACCTAAAGaaaacgtTTACTCTGCAATTCCGCTGAACG
TGAAAGACGATAAACGAATATGTTCGCACCAGCTGCCGTTTTCATTGGTC
CACGAACTTGGGGGCCTCTTAGCAGCCTCGCACTCGAAGAATTATAAGCA
CCTCGCGGACAAGCTTGGCTATAAATATTCATTTATTAAAAGACTAGAAT
CCTCGGAAGATCCTGTTGAGGCTCTTCTTGATGATTATGTAACGGGGGAA
AACCCCACTAAAGAACAATTATATTCTTCACTTTTGGCGATTGGTCGGCC
GGACGCTGCAAAGGTGGTTATGGATGAGCTCTAAatgGCACCTAGGGcgt
gcaccccctgccaggcggGATATTTTCTCAGTAAAATGTGCACAAGTAGC
TCAGATACAGTATGTCGGCTCTGTGCCGACAATTTTTTTAATCCCAATGT
TGGCTTTTCAAAGACCTGTAATAGATGTTCACCTTGTAAAAGGAATGAAC
ACATCGACAAGCCGTGCACCCCAATAAGTGATGTAGTTTGTAAATGCGAG
AAGCAAAATCACATTTACGACAAATTTAAACCGTGTCAGGCGTGTCCAAA
GggcACAGTTGTGATCAACAATAAATGTGCGAATGAAACTTCATTTTTCA
CGACGAGACAACCCACCACTAATAATAACAGCCAAGTTCATTCGAAAGTG
ATCGCACTCAGTATTGGACTCGGTGTAATAGCAATTGTCGTCTCAATTAT
AGTGGCTTTGTGTTGTTATTACAGTCGTCGGCGTAGAAGGCATCTTCCTC
CGATAGATGatgCACCTTCAGAAGCCAACGAAGTAGAAACGAACGAAAAA
CTACATATTAAAGCACCTAGATCTCCACCTAAAGaaaacgtTTACTCTGC
AATTCCGCTGAACGTGAAAGACGATAAACGAATATGTTCGCACCAGCTGC
CGTTTTCATTGGTCCACGAACTTGGGGGCCTCTTAGCAGCCTCGCACTCG
AAGAATTATAAGCACCTCGCGGACAAGCTTGGCTATAAATATTCATTTAT
TAAAAGACTAGAATCCTCGGAAGATCCTGTTGAGGCTCTTCTTGATGATT
ATGTAACGGGGGAAAACCCCACTAAAGAACAATTATATTCTTCACTTTTG
GCGATTGGTCGGCCGGACGCTGCAAAGGTGGTTATGGATGAGCTCTAAat
gGCACCTAGGGcgtgcaccccctgccaggcggGATATTTTCTCAGTAAAA
TGTGCACAAGTAGCTCAGATACAGTATGTCGGCTCTGTGCCGACAATTTT
TTTAATCCCAATGTTGGCTTTTCAAAGACCTGTAATAGATGTTCACCTTG
TAAAAGGAATGAACACATCGACAAGCCGTGCACCCCAATAAGTGATGTAG
TTTGTAAATGCGAGAAGCAAAATCACATTTACGACAAATTTAAACCGTGT
CAGGCGTGTCCAAAGggcACAGTTGTGATCAACAATAAATGTGCGAATGA
AACTTCATTTTTCACGACGAGACAACCCACCACTAATAATAACAGCCAAG
TTCATTCGAAAGTGATCGCACTCAGTATTGGACTCGGTGTAATAGCAATT
GTCGTCTCAATTATAGTGGCTTTGTGTTGTTATTACAGTCGTCGGCGTAG
AAGGCATCTTCCTCCGATAGATGatgCACCTTCAGAAGCCAACGAAGTAG
AAACGAACGAAAAACTACATATTAAAGCACCTAGATCTCCACCTAAAGaa
aacgtTTACTCTGCAATTCCGCTGAACGTGAAAGACGATAAACGAATATG
TTCGCACCAGCTGCCGTTTTCATTGGTCCACGAACTTGGGGGCCTCTTAG
CAGCCTCGCACTCGAAGAATTATAAGCACCTCGCGGACAAGCTTGGCTAT
AAATATTCATTTATTAAAAGACTAGAATCCTCGGAAGATCCTGTTGAGGC
TCTTCTTGATGATTATGTAACGGGGGAAAACCCCACTAAAGAACAATTAT
ATTCTTCACTTTTGGCGATTGGTCGGCCGGACGCTGCAAAGGTGGTTATG
GATGAGCTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002694XLOC_002694Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004760-exon-sc0000048-1491911889:524575..525041TCONS_00004760-exon-sc0000048-1491911889:524575..525041Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1510915933:524575..525041TCONS_00004760-exon-sc0000048-1510915933:524575..525041Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1575043694:524575..525041TCONS_00004760-exon-sc0000048-1575043694:524575..525041Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1491911889:525201..525327TCONS_00004760-exon-sc0000048-1491911889:525201..525327Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1510915933:525201..525327TCONS_00004760-exon-sc0000048-1510915933:525201..525327Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1575043694:525201..525327TCONS_00004760-exon-sc0000048-1575043694:525201..525327Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1491911889:525501..525585TCONS_00004760-exon-sc0000048-1491911889:525501..525585Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1510915933:525501..525585TCONS_00004760-exon-sc0000048-1510915933:525501..525585Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1575043694:525501..525585TCONS_00004760-exon-sc0000048-1575043694:525501..525585Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1491911889:525912..525998TCONS_00004760-exon-sc0000048-1491911889:525912..525998Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1510915933:525912..525998TCONS_00004760-exon-sc0000048-1510915933:525912..525998Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1575043694:525912..525998TCONS_00004760-exon-sc0000048-1575043694:525912..525998Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1491911889:526243..526278TCONS_00004760-exon-sc0000048-1491911889:526243..526278Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1510915933:526243..526278TCONS_00004760-exon-sc0000048-1510915933:526243..526278Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1575043694:526243..526278TCONS_00004760-exon-sc0000048-1575043694:526243..526278Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1491911889:526622..526696TCONS_00004760-exon-sc0000048-1491911889:526622..526696Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1510915933:526622..526696TCONS_00004760-exon-sc0000048-1510915933:526622..526696Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1575043694:526622..526696TCONS_00004760-exon-sc0000048-1575043694:526622..526696Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1491911889:526918..526947TCONS_00004760-exon-sc0000048-1491911889:526918..526947Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1510915933:526918..526947TCONS_00004760-exon-sc0000048-1510915933:526918..526947Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1575043694:526918..526947TCONS_00004760-exon-sc0000048-1575043694:526918..526947Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1491911889:527738..530315TCONS_00004760-exon-sc0000048-1491911889:527738..530315Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1510915933:527738..530315TCONS_00004760-exon-sc0000048-1510915933:527738..530315Clytia hemisphaericaexon
TCONS_00004760-exon-sc0000048-1575043694:527738..530315TCONS_00004760-exon-sc0000048-1575043694:527738..530315Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004760-proteinTCONS_00004760-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:524575..530315 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.697399	0.633633	0.103344	0.0839739	5.6741	4.5775	5.15157	5.40939	4.31039	5.97976	4.61914	4.07814	9.23745	8.74475	3.34518	3.73365	5.50152	5.33836	7.19506	8.86056	7.50351	7.39988	2.7021	3.0859	4.35805	5.73851	5.78446	6.1758	16.7115	15.287
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001368TNFR/NGFR_Cys_rich_reg
IPR000488Death_domain
IPR011029DEATH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004760 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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