TCONS_00004750 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004750
Unique NameTCONS_00004750
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2295

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004750 ID=TCONS_00004750|Name=TCONS_00004750|organism=Clytia hemisphaerica|type=transcript|length=2295bp
gtagagcgtcgtttatgagaacggtgactttcaatttgatcgaataatgg
agcgtattgaatagtagaatgtcgagtaaaagagcgtcaactgtaactTT
TTCTCTCTTGTAGATCTTATTTTGGAATCATCATTTTGTCAATTGTTCTT
CTGGCAAACGTAAATACAGTGAATAGCACATGCGCAGGTCGTCAAGAGGG
AGAACAATGGACCGAAGGAAGCTGTAAAGTCTGTTTCTGTCACAGAAAAA
GGGTGACGTGTGGAACAATTTGTGGAAGAGGGAAAGCTATTTCAGATGCA
ATACAAAAGAATCTGGATATTCAAAGTGCTGGCAACAATCTCATAACGGC
AGCTCTGgctaattcaaaattttcatgttaTCATGATGGTCGAAAAAGAC
TTCATTTAGAATCTTGGCAAGAAACCAATCATCATGCAAgtttattgaaa
caaaagaacCAGGAATGCATGCTTTGTCAATGCAAGaaaaatatggtGTC
ATGTACGGTCAGATTTTGTCCACGTGTCGCGTGTGCCAATCCTGTCCGGA
AGAAAGGAACCTGTTGCAAACACTGTCCAGataGTCGTCTTTtactaaag
aaaagaaaaggtTGTGAATATTTCGGATCGGTATTCGATAGAGGAAGCCA
ATGGACCGTTTACATTCCAAACAGCCGACAAAACCATTGTTTAGAATGCT
CTTGTAAAAAGAAAGGGTGTCGTCCAACTTATGCATGTCAACGTAAAATA
TGTCCTGTACTTCGATGCAGAGAACAAGTGAACAGACCTGGCAATTGCTG
CAAGACTTGTAAAGACGACCTGACGTCACAACAACAGATCATTGGTAACC
ATCAACTAGAAAACATACAGCATGACAATCTCTACAACACTCAACAACAA
CATTCATCATCTCAGGGTGAAACATTTACTTTCTTTGATTCGCTTAAAGA
CGATCGTTCATTGTCGCCGTCACAAAAAGACGACAACGAAGATGACGACG
ACAATGACGACAAATGCAATGATGAGAATGATGAGGAAGACAAAACTCGC
CGTCCAACTTCACAACTAACAAAGAAGCCATTGACTGTCATTAAAATCAC
AGAAAAACCAATCAAGCCAAAGAAAACATATTGTGATTTTGGTAAGATTT
ACAAAAATGGAGAATCATTCATACCAGAGGGTTTCAATTGTCTTCGTTGC
TCTTGTAAGAACTCGAACGTGACATGCGGACGAGTATTTTGTCCTGTAAC
GTACACCTGTAAGAATCCAAGGCGTCAAAAAGGACTTTGTTGTAAAATAT
GTCCAGGAACATCAAGATCAGAAGCATTGAAAACGGAGGAGCGAGATGTC
CGACCGTTGATGAAGCCACGGAAATCATGCAGTCGCAATCGCAAAGAAGA
CAGAATACAAGTCTTTGAGTATGAATCGCCCACATCTTTACTTGGAGGAA
GAATGCTTAACAATTACTTCTTATTCGATCGATCACAAATGACACCACCT
GGTCGTTCAGAGATTCATTCATTGAAGTTCACTGCACCAAATATGGTAGA
CATAGCTGTGGACCAAATTACAAGTGATAGTGAATCCTTCTTCTCTAAAT
GGAAATATATCGGCTCAGTGAAAACAAAAGTGCTAGAGCGAGTACACCGA
CACGAGAAGAACTTGAAATCAGCCAAATCCTTACACAGGTATAACAATCT
GGTCAAATTAATCAAAGAGAAAGCAGCCAAAGGGAAAGTTCACCGAAGAG
GTGGACGATGCGAACGCAAATCGACTGGTGAACATGATACCATAGCAAAC
CAAGAActaatcaaaacattgaaagaaATAAGAAGAAAATAGTACATCTT
CAATTATCCAAGACATGGTAAAGAAATGGATCTTCCATGGTTTGCTTTTG
GTCATGAAACTAATgtaaataataattaaaaagaataataaaaATACCGT
CCCATTTTGGATGAAGATGAGAATGAAACAAACACTCATTTTAGCGACAG
ATTTAATAAGCCTACCAATTTGATCAATGTGGTggccaatttttaaaaat
tcatacGACTTTCTTTATATTCCCTCTTTTGGAGTTTAAAAGGGAATTGA
AGGGACAATTTTCTTTGTAACATAAAACATTCTTTGTTGTTGTAAATAGG
TAGTTAATTCGTTCATTCTTTGTGCTAGTCAGTTTTTTNCTTTGTTGTTG
TAAATAGGTAGTTAATTCGTTCATTCTTTGTGCTGGTCAgttttttgtat
tatttattgGTTGAAATGAGATTAAATATAGATTTTTAGCGGTAG
Run BLAST on NCBI

transcript from alignment at sc0000048:267898..281097+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004750 ID=TCONS_00004750|Name=TCONS_00004750|organism=Clytia hemisphaerica|type=transcript|length=13200bp|location=Sequence derived from alignment at sc0000048:267898..281097+ (Clytia hemisphaerica)
gtagagcgtcgtttatgagaacggtgactttcaatttgatcgaataatgg
agcgtattgaatagtagaatgtcgagtaaaagagcgtcaactgtaactTT
TTCTCTCTTGTAGATCTTATTTTGGAATCATCATTTTGTCAATTGTTCTT
CTGGCAAACGTAAATACAGGTAGGTGGCCAAAAACTCATTAACAAAGTGT
TAAATGCTTACTCTACGGTGCGCCGTGATTTTGAAATCTTGGCACGCCAA
TGCTTTACTCCGATGGAAGCgtaatcaaacaaaaacttagaaatttttgt
caaaactaTTCCTTGAAACCTAACGAACTTATAGAATCTTAGGGTTTTTA
AAAAAGGTTattaaaagttaagaaaaagGTCCCTGTCTTGTATTCAATCT
TGCTTTTTTTACCCCTCCCAACATAACAAAATCATAAATGTTCCTAGATT
GTCCTTTGTATGTCTGATGTCTGATTTTCGATCAAAGTTGTCAATCAAAA
GAAACTTGCTAACAAGCTCAAAACACTTTTAAGTTTTTATTTGGTAGATC
TTAAATTATAATCCTTTTGAAAAACGTTTAGCACAAGCCTGTGAAATCCA
TCGTACGTCACGTGGATAGTATTTTTGTCACAAAAGCTTCAACCTGAGCT
CCTTTAAAACGTTAGGGCGGGGAGATGAAACTTTTCACAGGCTATCAATA
ACAAACTGGGGGCGGGCTtagaaaaacaaacaacaaacattaGTATAGAG
ATGTTTAggatattttgttttgataagtAAACAGATAAATAGCTATTGTT
GGGATTTTTTCAATGAGTTCTCCGCCTATCTGTCAATAACTGTCTTAACT
CTCATTGATAATTCCCCTTTTAGTCGAATAGAGATTAATTTGGTAGTGCC
ACCCGCATTTACGTAAGCAATCTGACCCTACAATCAAAGTGTCAACCTCT
CAAGGCTTCATGCATTCCCTCTGATATATTTTGATTTAGGAGGGCTacat
tgtgtataaaattgtagTTCTAGAGTTACCCGTAAAGTTTGGGTAACCTG
cttcaaatttcttaaaaaaggtttaaaaatccAATAATTGCATTAACCTT
tagccattcaaatttttcattcaaattaaggaaatttaaagatctctcat
GTAAGACTTACAATCAAGTTTCTTAAACTAAAAAACACAAAGACTGGGTT
TGCGTTTAGCCTATCTAACCCTACAATTAAAGTTGCCAACCTAGAAGAAG
TATTTCGAGCCCAATTTTAAGTTCAATAAAAAGCACTGGAGTCCTTAGCT
AAAATCATTACTCATTCTGATATTGTCATATGTTTTTCGGCCTATTACAT
GAGATATAATCAAGTGTTTAAGCTCTCATTTCGTCTCAAGTAAAGTTTTT
GCGAAATTATTGTGCTGGGAAATAAATAAGGAAAACCTTTGTGcatgaat
acaccttttcgaccgtagccgccaattaccaAGCGTGCATTTTTTctccc
taaactcgatccaatccctttttgacacctttttctattgtctacaGGTG
CGGAAAAAAGACTcagacggttttagggtggtaaaacggacaaataAAAT
Ggctgcgcggcaattggcggctacgaccaaaaaggtttataaggaacggt
tcttcaaaaaaaaaaaatatatattgcaaaattcaaattttgaaatatct
tgtAAGTAATGTGATCATTATATTGCATTTCGTTAATAGTGAATAGCACA
TGCGCAGGTCGTCAAGAGGGAGAACAATGGACCGAAGGAAGCTGTAAAGT
CTGTTTCTGTCACGTAAGTATGACAATTTAtttcttcatcattttcaaTG
AGTAATTATGCAAGTTATTTACCCGCTTGACTTTGTGAAAATTTCCTTGG
ATGAGGATGAAATGTTAGGGTATTTGTGTACGCCCCCTTCTTGCGTTACA
TTTAATGAGCTCAAAAACATCACGAGGCGACTAAAGggcggtctccactt
tcgcgcgaaatcagcgaaaactttttaacgtttttgtaaggtcattggtt
ggttgaaaaatgaagcaattccattggttaaaattgacgtaacggttgaa
aaaagttgaacttttttaacctttttttttgtttgcacaaaactttttta
tgacgtaatcttttcttcaggcaaaaaaagttgagaaaaaaaactgtcgc
ccatttcgcgtgAAAGTGGCATGGATACCGGCCTTAAGACAAGGGCTTTA
ATGTAGACAAAATCTTAAGATAATTTTacgcaaaaatcaatttttgaatt
tgactacagtatatggcccccaaaacggagacggcccccaaaacggaggt
tttcattaaaatgaagattctgacttgtagatttatcagaattaaacgat
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNtcagaattaaacgattattttttattttgaaagaatgatggtta
tacttaaaaatgagcatgtttttgctggtttgagactgattcaaaataac
atatttccgtgtaaaggaaatattttaacaccaaaattagataaaaattg
cagataactcactctagctccttggatattgaaaataagttatgaaaacg
gggtataggaaactttctacacccaatgccgttcagaaaatgcaaataca
tttGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNataaagtagagatgttaaaggttttcatacag
caaaaatttttgtaaaatctcttttcctctagatttgagagaaatttcaa
atttgatcgccgttttgggggcccacATACTGTAGGTTTTCCACGAGGAA
TATATTTATGATTTAATCTAACCTGCTGAAACTTATAAACTGTTGCAATA
TTTAGCTTCTTAATTGCGCTTAATCGATCTATAAAATGAATATAGTGGTT
TATTTTATTGCCTATTGTTAAAAACTAATTATTTGTTTCGCTACCTGTAT
TTATAAGACCCATCATTTGATATCATTGCTCCCTAATTACCCTTGAGTAT
CCGTTAGATCATTTAATCGAAACCAAATATTTACGTCACTGTccaaaaat
attgcattttcattttctaagaatatgaaaaataaatagaaccaaaaaaa
gacttaaaaatcGAATATTCATTAATGCAGAAAACTTTACACACGTCAAA
TGGAGAATGGGGGCCTCTAAAACCTAAAAGAAAACGCGAAAAAGCACTTT
CACAGataaattgacaaaaactgaGGTCGTTATTGACAAAccacttttca
atatattttttactcaaatgaatgatttgaaattttagacCAAGAAGGGG
CGTGTCGATCGAAGTTTGAAGAGTAGAGACACATACAGTATCAATTCTTA
GCAAAACCTAATTATGCCAGACAAAATAAACCCCGGTCTTACAGATCCAC
TGGGAACCCCTACCAtaggaaaaattggccaaattatCGTCcctagtgga
aaattatactctaatttatGTTCCCACCGAGAAATgttaaataaaccaat
cctcacctTAAAATATTGTCCTTTCAATCTCACTGAATCTTCTGACTTGA
AACAGAGAACTATAACATCTATctgcttgaaaacaatggaattctaatcc
caagccataaaaaaacattagaatatCAACCCCCTTCGAGCGTCTCTCTG
CTTCGAGCttcagttcgttatttttacCTCCATAGGCTGAAGACATCCTa
ccgggtttgtgagaagggggtggcAAAATTTGACCCGTGGCCAAATTAAG
ACcatgacaaaaagaatttggAGTGGAATTACACCCCAAAACTAGAATCT
GTCAGATATATCATCCCGATTTGGATTAGTGGCCCTGTTAAATGTTTTAA
GAGCATGGAAAGGGATCCCTAGTAttttaaaatgttaatttctttttgat
atCAGAGAAAAAGGGTGACGTGTGGAACAATTTGTGGAAGAGGGAAAGCT
ATTTCAGGtaacaaatttcaatttcaatttttatatttcCCATTCTGAAC
TgacaaaaatcttcttttttgaaggacataaatgaaattgaattaccTTA
AAGGCAAAAATCTTAAATTCTTTACATTTGAAAGAACTCTTCAGATAAAA
CTAAATCGTTCTTAGAAACGAAATATACTGGGGAAAAAAGTTGACAGGGG
TACAGTTTGCGTCTTATTCGTTTATTTGACCAAATTAAGGTATTATTTCT
ACATTTTCTTCAGATGCAATACAAAAGAATCTGGATATTCAAAGTGCTGG
CAACAATCTCATAACGGCAGCTCTGgctaattcaaaattttcatgttaTC
ATGATGGTCGAAAAAGACTTCATTTAGAATCTTGGCAAGAAACCAATCAT
CATGCAAgtttattgaaacaaaagaacCAGGAATGCATGCTTTGTCAATG
CAAGGTTTGTTGTATATTAActttacccagctggcacacaacgttgtttc
aacgtttatctaaccttatatggacgttgtgaatgttagaaaaacgttca
aacaacgttgtgtgccagctggttaTCTTTTCCCGGCTTCCAAAAGAGTA
ATAAGGGTCCTGGAGAAAAAGAAGTTTgtaaaacaaaatttgatttttcc
ctTAAAAAGGTAAAGGGAAATGTACCAAAAGGTTTGTTCTTTTTGCTCCG
AATCTCCAGCGTATATTTTCCGCACATACGATCGTTTTAGTTATTAGTTT
TCCAAACTGCATGTTTCTAAACCAGTCAAATAAAATCATACAATGGAGCC
GTTTTACAGGAAATTCATGTAGAGAATAATTTACGATGAGCAGTAACGAA
CAAATGTTTTTCAAGACAGTATGTCATTATATCATTTTGTCTTGGTGACA
CtatttttaatgacgtcatttttgaccTAGGACCATCCGCAGTGAATGAT
TGATTGGCTAAGCCTCATCtcgatacaccttttcgactgcAGTCGCGTGT
TCAGGCGCGTGTCactttattatttcatttaccaccctaaactcgatcca
atcctttttacaatttcttctattgtctttaggtgcgaaaaaaagactgg
gacggttttagggtggtaaaacggacaaaaaaatgcccgcgcggcaattg
gcggctacggtcgaaaaggtgtatttaacTTCCATGTATCAGTGATCCGG
GAAAAACTTTTTAACATTAATGTTTATAAGAGTTGAATGGAAATATCTAC
ACCAAAGATGTATGTAGATAGAAACGAGGAGCTTTAAGTCAATGGGAAAG
AGCTTCTCGTTTTTTTTATCAGGGACATCAAAAACATGTTTAGTTCAGtc
cgtatattaagaggataaataggatttcttgttctcaGAGCTATGGGCGC
TATAAGCCTTGctggcaggtagttacgtaaataagaCGGAGTTAAGTTGT
TTATAATTTtatagaagaatgtcattcttcttgCAAAACGCCTGTCAGCA
AGGCTATCAAGACCAAGCTAAGAGTATATTTTAtcctgagacgttccacg
aagaTAGCCTGTGATGGCTAAACAGGCATTGTATTGAATGGTTTCCAGCT
TCTGCNTTCAAGACCAAGCCAAAGCCTCTCGTTTTAATGATTGGTGATTT
TAAAGTTCATTGTTCACAAGTTAGGGAGTGCCAGTGGTAATCCTCTTCAT
GTCATCGAGTCAAGTTTTACCCTGATCAATATTATGAATTGCCATACTCC
CACGTAGGGGCTTGTGATATAATCGAGTGGGGAtcccaaaaatctaagaa
tttTGTAGTTGCGTTAAGTTTTACTAAAGTTTGTCAAGATGGGACAGAAT
TACAGGGTATTTTCACACAAGGGACGCTTTTATTGGCTAATTTTTCCTTT
GAGTACATTGTCCTACTGTGTTTTCTAAATGTTACGTAGCTGAAATTAGC
AGCTTGTTGATGAAAACacagtataagaaagccgcggctggaatatgtac
cgcattgtcttttaattgttaattgctgttccatttctgtctccgagctt
tataagaacatcagtttgttattggtagatagtttttgaaattttgcgct
tattttccttcacaaaaagttttttttttgctttcttatactatgttgAA
AACACATGACCGAGAAACACTTAGTTGGTGTTTTTTTAGAATGTACCTGA
TGGAATTTTCAGAGATctttaaaatcatatttttcgCAGTATCTTCTTTG
ATGTTAGGAGTATTTGGACCTTATTTTCAGAAATGACGTATTTTTCCACG
AGGATTCCAATGATATAGGTTTCAGAGTAATTTGGGATGAAATATTCCAG
CGGGGGGGGGGAGACAaaagtaaattttcaaatttaaatttaaggaGTAG
AAAATGATGAAGAATTCCACAATTTTCGATTTCGGGTGACataaaaagtg
gaatatttcaTCCTATGTCACTCTTTCGGTGATTGCTATTTTCAGAAAGA
TACACTCTTGTTTACACTCTACTTTACACTTATGTAATTTTTCTCCTCAA
AATAATATCCAttagtttttaaaacatttcttttggacaacccttttatc
aatatttttggaatatctccTTTCATCATTTTGCTTACATTTTCTAATAA
TTTATATGGTACACTATTTGAGAGTATAATTTCAAGACGGAATCTTTAAT
AGATAAGGAGCAATTAACTGTGGAATTTTTCATCCATCCGCACATAAGAA
AGCTCTCACCCTAGATTACTCCTAATTTTGTCCATAAATTGTAGCTGTCC
AACTCATGCAATTAAAGCCGGACTAAAAAAATCGGAATATTTCATCCTAt
ctctttttctcaaaataaattataaattaaaaaaatactcaTGTAAAAGT
TTTCATTAAGAAAGGTAACCTTAAACAGGAGATAACCAAAAATTTGGTAC
ACTCTAAAAAAAACACCGACGTAAGAATTTTCGTTATCCAATAAATCAAG
CCTTTCTTTTTCgtcctttcagaaaaatatggtGTCATGTACGGTCAGAT
TTTGTCCACGTGTCGCGTGTGCCAATCCTGTCCGGAAGAAAGGAACCTGT
TGCAAACACTGTCCAGGTATGAGCTTTAGATTATGCTAATTTCTTTATGT
CACGTTTTCTACTTTAGTCGTTCTTCCAGGTTATTGGTTTGGTACTGTGA
TGtttcaaaagctttaaaaatttaccaaatggttacaaaaattcaaaaat
atctttaaggGTCATATAGATTTTAAGATCTTTTTAGACTAAAAGAGTAA
AAGATTCTTTTCAGATTCAGTGTTTCTATGGGTCAGGTTGGTGTAAACCT
CCAAAAACCGTAAAAAAACTTGACAAAGATCACATTTTCCGAGTTGGAAC
GTCTATACTATAAATCTTATTTTgatcttcttttttcattttagataGTC
GTCTTTtactaaagaaaagaaaaggtaaAGATATTACACCAATATATAAT
CACTtcctagctggcacacaacgttgtttcaacatttatctaacgttcac
aacgtccaNACTtcctagctggcacacaacgttgtttcaacatttatcta
acgttcacaatgtccatatagcgttagatgaacgttgaaacaacgttctg
tgccagctgggttaaaCCTccatttttgattctttttagtTCCGTCCAAG
ATTCATCCATCACTGCATTAAATCACCATAGCCCTAACTTActgcaattt
tctttttaaggtTGTGAATATTTCGGATCGGTATTCGATAGAGGAAGCCA
ATGGACCGTTTACATTCCAAACAGCCGACAAAACCATTGTTTAGAATGCT
CTTGTAAAAAGGTGAGTGAATGTAAAAGAACTCTAAAGTGCAAGGATGAC
AACCAGCTTTTTCGctaattcaaatttctattatccaaatctttctataa
ttcaactTCGAATTATCGAGAGTTAACTGTATATCAGCGACAAATATGCA
GAAATATGTACCTTATCgaggaaaacttcgtcgggaaaaagtggcgaaat
tttggccaaatgacgaatatttttccccgatgaaaattttccccggcctt
aatgcgtttaccaactaccagcaagtgacgaatatttttccccaacaaaa
attttccccgatgaaGTTTTCTCCGATAAGGTATACTCCTTCTAGAAGGA
GTGGTGTTAtattattttgacaaatatagGCTGTTTTAATTCTGAAAACT
CTTATTTCATATATTTTGATGCAGAACTCCCAAATACCAAATTAATAAAA
TGAAATCTGTTGCACTTTCTCATAGAAAGGGTGTCGTCCAACTTATGCAT
GTCAACGTAAAATATGTCCTGTACTTCGATGCAGAGAACAAGTGAACAGA
CCTGGCAATTGCTGCAAGACTTGTAAAGGTATTGTAATGTAATGCAGCGT
GATTGCTGACTAAAAATGAATGATTTATAAACCTATTTTCTTGATCTTTT
GCTGGTATGGCTCAATTTTACGGTTCATAAAGTCCATAACAAATTTGCAT
TTACGGTTCGCAGTTTGCTTTTGCTTTTGGCGTGATTATACATGATTGGG
GACTCTGCTTGGGGCTTCATAGATATAGAGAAACTTCACAAGAAAACTTT
GTCTCGATAAGATTCTTTAATGTCACAGCTGTATTTTAAGTGTTTCTCTC
TTAAAACCCACTTGTTCTTTCCTCATAGACGACCTGACGTCACAACAACA
GATCATTGGTAACCATCAACTAGAAAACATACAGCATGACAATCTCTACA
ACACTCAACAACAACATTCATCATCTCAGGGTGAAACATTTACTTTCTTT
GATTCGCTTAAAGACGATCGTTCATTGTCGCCGTCACAAAAAGACGACAA
CGAAGATGACGACGACAATGACGACAAATGCAATGATGAGAATGATGAGG
AAGACAAAACTCGCCGTCCAACTTCACAACTAACAAAGAAGCCATTGACT
GTCATTAAAATCACAGAAAAACCAATCAAGCCAAAGAAAACATGTAAGGA
GGACCCGAAAGGTACCCCATTGGTGAAAGATGAAGTTTGTCTAATTATGT
AAATGCAGATAAATGCACTGCAAGAATATATACATTCacacacagaaaaa
aatcaccttGATTTTTAGTGCATGTAACAAGCTCCATTTTAAACAACACT
TTTGATGGAAAACGTATCTTTAAAATGAGGAATtatctttaaaatgaaaa
tttttcaaattttaccattATGATTTCTGTTTTTGTAGAGTATTCAATCT
TTAATTCTTCTATATAGATTGTGATTTTGGTAAGATTTACAAAAATGGAG
AATCATTCATACCAGAGGGTTTCAATTGTCTTCGTTGCTCTTGTAAGGTA
GGTGCTCTTAGTCCAAAATTTAACTCTGGTTTTTTAACAAATTATCAGCA
AAAAAAGCTGAGAGGTATTAAGTATCCTTTTTGTACCAAGTTTAAGTATA
AAATCTTTGGTATGGCCTGGCCGGGGAGTACCCACGATCTTGTGCACTGA
AGCCAAATGCACTACACTACGGTCAATGTTAATACAAGTAAATGGAAAAC
CGGATGTGTATCGAATCTGTGTTTTGTCTTTCAGAACTCGAACGTGACAT
GCGGACGAGTATTTTGTCCTGTAACGTACACCTGTAAGAATCCAAGGCGT
CAAAAAGGACTTTGTTGTAAAATATGTCCAGGTATGGTAAACGTTTAgat
atttcaatctttttcataactttttgttgGGTCGATATTTTAGACaatct
ttcgattgttttcgtgGATTCCACAACCCAGGCTCGGCTATATATAAGCT
AAaaggaacattggaaggagcggagATTCAAACTTGGAAGCTGATGCCTT
GATTACTCGGTCTTCGCTCCTTTGTGTTCACCTATTCTTTattctttatt
ctttatttCCCTATTCCCCTAGGTATATAACTATAATTTCGTTCAGATAA
ACGATAAAGTATTGTGTAGGAAGTATTCGGAAAGTCTCTTTAGTTTTGTA
TATAAGCCTGTCATGGTTTTATAATTCCTTCCCCTCCTAgttttacatcc
gaaattttaaCGTTATTTGAGGGTTGAAAATTCTACCCATTTAGAATACA
TTCTAAATATTTCCACGTTGTATTCACCTGAAGGAACATCAAGATCAGAA
GCATTGAAAACGGAGGAGCGAGATGTCCGACCGTTGATGAAGCCACGGAA
ATCATGCAGTCGCAATCGCAAAGAAGACAGAATACAAGTCTTTGAGTATG
AATCGCCCACATCTTTACTTGGAGGAAGAATGCTTAACAAGTAAGCCAAG
TTAATAAAGAACGAACAACCTTACCGCGATAACAACAGATCTTTTTCAAG
CCTGaaaggctagatgtcgtgctttaagttcttccaagcaaaaaaaagtg
aatttcgcgaaaaatattgctccaattgttttcgaaaacctgcgaagtct
ctaattggtcaagcgctgaaattatattgtaatgtcacgtgacatAAGAC
Tctctacctaacctcggcacacttttcagccaaagcacgacaactagccc
ttcgggctttaaaaatctatggtctcaacctctataactcaaccatgtcc
ttaactcgaacaagttttctccattttgtgttCCCACGtgcgggttcgag
ttatggagactccgctGTAACTACGTTTAATTATATATCTGAATtcaaac
agaaaaagaaaaagtgatcAGATGGTGGAGCTTGCAGATGGAGGTAGAAG
GAATTTTATAGGAAAAAAGTGGCCCCTACCTCCACCAGTTACACTCTGAT
ACATTTAGTGGCTAGTAGATATAGACACGCTTGTGTCACATACCTGGGAA
CCCAGCCCTACTcgaaaattttgcgaaaatttcgtccccggtgggaaaac
accctgaaaatttcagacccactgggaaattgactttgatttcgaCCCCA
TTAGAAGTTTGAtgcttaaaaattgcactccaaacccatccccactggat
ttttcaacctttgaatataatagaatttctatcctcacTTGGATTTCAAT
ACGAGTTTTTAggaaaaaagttctaccggggctgtgagacaggggtgtat
atacCAGATGCCAAGAAAGTGTCTATTTTCGAATCTTAATATTAATTGGA
CCAATCCGCTGCTTTATTTTAGTTACTTCTTATTCGATCGATCACAAATG
ACACCACCTGGTCGTTCAGAGATTCATTCATTGAAGTTCACTGCACCAAA
TATGGTAGACATAGCTGTGGACCAAATTACAAGTGATAGTGAATCCTTCT
TCTCTAAATGGAAATATATCGGCTCAGTGAAAACAAGTaagattttttaa
ctttttggtgtcaaagtttatttattttaccGTTTAAAAGATAATTGTCA
TAAGGAAAACAAATATTAGTAAACGCTTAAAAGCGAATTGACATTTATTC
TTGAATTTggctttttattttcaaaccaATGTTTCAATCTTGGTTGAATT
actatcgttggaaagatattttactTACTAAATTATAAATTTCATCTTTG
GTACAgaggtattttaaaaaaatactgtaAGTAGTATTTTTGCAGAGTGT
CGACTGACGACAATTTGTTGAAAACATTACCCGATAAGATTTCTTTCAAA
GCATGCTCTTTTATTATATTCACATTTTACAGAAGTGCTAGAGCGAGTAC
ACCGACACGAGAAGAACTTGAAATCAGCCAAATCCTTACACAGGTATAAC
AATCTGGTCAAATTAATCAAAGAGAAAGCAGCCAAAGGGAAAGTTCACCG
AAGAGGTGGACGATGCGAACGCAAATCGACTGGTGAACATGATACCATAG
CAAACCAAGAActaatcaaaacattgaaagaaATAAGAAGAAAATAGTAC
ATCTTCAATTATCCAAGACATGGTAAAGAAATGGATCTTCCATGGTTTGC
TTTTGGTCATGAAACTAATgtaaataataattaaaaagaataataaaaAT
ACCGTCCCATTTTGGATGAAGATGAGAATGAAACAAACACTCATTTTAGC
GACAGATTTAATAAGCCTACCAATTTGATCAATGTGGTggccaattttta
aaaattcatacGACTTTCTTTATATTCCCTCTTTTGGAGTTTAAAAGGGA
ATTGAAGGGACAATTTTCTTTGTAACATAAAACATTCTTTGTTGTTGTAA
ATAGGTAGTTAATTCGTTCATTCTTTGTGCTAGTCAGTTTTTTNCTTTGT
TGTTGTAAATAGGTAGTTAATTCGTTCATTCTTTGTGCTGGTCAgttttt
tgtattatttattgGTTGAAATGAGATTAAATATAGATTTTTAGCGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002687XLOC_002687Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004750-exon-sc0000048-1491911889:267898..268066TCONS_00004750-exon-sc0000048-1491911889:267898..268066Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:267898..268066TCONS_00004750-exon-sc0000048-1510915933:267898..268066Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:267898..268066TCONS_00004750-exon-sc0000048-1575043694:267898..268066Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:269637..269710TCONS_00004750-exon-sc0000048-1491911889:269637..269710Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:269637..269710TCONS_00004750-exon-sc0000048-1510915933:269637..269710Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:269637..269710TCONS_00004750-exon-sc0000048-1575043694:269637..269710Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:272653..272704TCONS_00004750-exon-sc0000048-1491911889:272653..272704Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:272653..272704TCONS_00004750-exon-sc0000048-1510915933:272653..272704Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:272653..272704TCONS_00004750-exon-sc0000048-1575043694:272653..272704Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:272961..273151TCONS_00004750-exon-sc0000048-1491911889:272961..273151Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:272961..273151TCONS_00004750-exon-sc0000048-1510915933:272961..273151Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:272961..273151TCONS_00004750-exon-sc0000048-1575043694:272961..273151Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:275720..275813TCONS_00004750-exon-sc0000048-1491911889:275720..275813Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:275720..275813TCONS_00004750-exon-sc0000048-1510915933:275720..275813Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:275720..275813TCONS_00004750-exon-sc0000048-1575043694:275720..275813Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:276142..276171TCONS_00004750-exon-sc0000048-1491911889:276142..276171Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:276142..276171TCONS_00004750-exon-sc0000048-1510915933:276142..276171Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:276142..276171TCONS_00004750-exon-sc0000048-1575043694:276142..276171Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:276458..276558TCONS_00004750-exon-sc0000048-1491911889:276458..276558Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:276458..276558TCONS_00004750-exon-sc0000048-1510915933:276458..276558Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:276458..276558TCONS_00004750-exon-sc0000048-1575043694:276458..276558Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:277023..277125TCONS_00004750-exon-sc0000048-1491911889:277023..277125Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:277023..277125TCONS_00004750-exon-sc0000048-1510915933:277023..277125Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:277023..277125TCONS_00004750-exon-sc0000048-1575043694:277023..277125Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:277426..277740TCONS_00004750-exon-sc0000048-1491911889:277426..277740Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:277426..277740TCONS_00004750-exon-sc0000048-1510915933:277426..277740Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:277426..277740TCONS_00004750-exon-sc0000048-1575043694:277426..277740Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:278015..278094TCONS_00004750-exon-sc0000048-1491911889:278015..278094Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:278015..278094TCONS_00004750-exon-sc0000048-1510915933:278015..278094Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:278015..278094TCONS_00004750-exon-sc0000048-1575043694:278015..278094Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:278332..278428TCONS_00004750-exon-sc0000048-1491911889:278332..278428Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:278332..278428TCONS_00004750-exon-sc0000048-1510915933:278332..278428Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:278332..278428TCONS_00004750-exon-sc0000048-1575043694:278332..278428Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:278881..279037TCONS_00004750-exon-sc0000048-1491911889:278881..279037Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:278881..279037TCONS_00004750-exon-sc0000048-1510915933:278881..279037Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:278881..279037TCONS_00004750-exon-sc0000048-1575043694:278881..279037Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:279920..280083TCONS_00004750-exon-sc0000048-1491911889:279920..280083Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:279920..280083TCONS_00004750-exon-sc0000048-1510915933:279920..280083Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:279920..280083TCONS_00004750-exon-sc0000048-1575043694:279920..280083Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1491911889:280430..281097TCONS_00004750-exon-sc0000048-1491911889:280430..281097Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1510915933:280430..281097TCONS_00004750-exon-sc0000048-1510915933:280430..281097Clytia hemisphaericaexon
TCONS_00004750-exon-sc0000048-1575043694:280430..281097TCONS_00004750-exon-sc0000048-1575043694:280430..281097Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:267898..281097 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0331694	0.192567	0.244912	0.0688046	0.0724948	0.743412	0.71647	0.561658	1.18941	2.55008	0.00461943	2.45763	1.54624	0.181816	1.8868e-06	2.80833e-05	0.0540737	9.03868e-05	1.02982e-05	2.39415	2.94091	0.00196613	3.09112	6.21491	8.72032	8.81516	3.23546	0.868334	0.807736
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004750 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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