TCONS_00004742 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004742
Unique NameTCONS_00004742
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4917

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004742 ID=TCONS_00004742|Name=TCONS_00004742|organism=Clytia hemisphaerica|type=transcript|length=4917bp
taaccTGATTGTACCGCGGACAAGAGGAGAGCGATTAATGCAGCCAATCG
AACATGATTATTGAATACAATTGAAGCAGCAAgATGAGAGAAGACcctgc
aaaataaaaaattatgaaaatttccaCCATCATCATAACAATATGGACTG
TGTTGATGTTTGATAAAACTTCAATTGCATCTGCATCATCATTTATCTCC
TCTAAGTCTAACCAACACGAATCGTTTTCATGGAGTACACAAAATTCTGG
TGTTTTGACATCGGTTGATAATCTTAAACAGCCAACAACTTTAGCTCCTT
CAAATACATTCACAACGATGTCAGAAGGGTCAACATCAATCATCGGCCCC
AGCGAATCCACTATAGATAATTCGCTGGATAATTCTGGAATAGTAACAAC
ACCTGTTACCATCTCTGAGCAATTGTCTACGTATAGATCAGAAaccattt
tacaaaaattttctacgCAATCCAAACTTcattcaacattttcaaacacA
TTACCCGTTAGTGATAGCTCAATCATTATTAGTACTATTTCAGACCAATT
CAACCCTTTAAGCTCTCTTACGATAAAGAATTTACCGTCACTAACAACAG
AAGTATCATTCTCAACACCAGCAATGGCTTCGTTAATGAACCAAGAATCA
AGCTCACAAATATTGACGCATTATACACAATCCTTATCTAGTAACATTGA
TGTCTCCAGTCAATCAAGCGGAACACAATCTTTATCCAGTAACATTGATG
TCTCCAGTCAAGCAAGCGGAACACAATTTTTATCTAGTAACATTGATGTC
TCAAGTCAATCAAGAGGAACACAATCAAAGACACTATCAGAAAATTCGCC
AAATCTTTCTTCATCAACAACATCGATACAGTATCCAGactcatcttcat
tttcaactcAAATGCAACTTTCATCAGTCATAACATCCAACATTATTGTG
GACTCAATAACTTTTACCAAGACAGAATCACTGACCAAAACTAGCACACC
ATTGAtcgaaaatgtttcaattttctcttCTATGGTCAATGAATCTGTTT
CTACAGTAACATATTTGCCAAGATTTACAGCAAGTCAAAGTAACTTTTTG
GAAACCAAATCTTCTATAATGGAGGAATCAGATATCCAAAGTTCCCAAGC
ATCAGAAATCGTTTCgtcttcaaattttgattccTCCTTCATCATTTCAA
GTCAACTAAATTTGATATCAACTGATACGTCATCGTCAGTCTTTACTTCT
TCAAAAATGATAAGTGAATTTATTGAAAACTCAGAAACCTTACTTTATTC
TAGCTTGGAAACCAGTAGTTCTTCATTTTCTAATCTTCCTCTTTCATCCA
ACTATGAAGCATTTGAATCAATAACATTATTGACAGAGTTAGTCCAAGCA
TCTGCTTCCTTATTCACCGTATCAGTTGATGTATCATTGTCCAGCATTAG
ATCATCTATTGACATAGAACAATCACATACTTTACAGAAGACTCCTGTAT
TTTCGACTTTCTATACTCAACTTTTATCTACTGTGTCAACAAATAAAATC
TCAAGCTCGATATCCTCAGTAGGGAAATCCTCCATGATTCCGTCACAAAT
GAAGAGCTCAGAAGCATTGGCAACATTAACATTAATATCAAACATGTATT
CATCAATAAATACCAATGTCTTGAATAGTTTTTCAACTTCCGAAACAACA
TCAACCAATGTTGCATCAATTCAACAATCAGATAGTATACTCGTTTCCCA
TGACTCATCATTACCAACAACTTCAAAAAGAGCAGAACACTCAACATTTG
TATTAGGCGGTTCATCGAGTTCATCCTTACTCCAAAGTTCCAAGAAAGTT
ATGGATTTTTCAAGTAATATTAGCCCTGAAGTTTCTTCATTCAAGGTCGA
TCTGGAACCTTCATCGACACTGATATTGATAGAACCCACCAGTTTTGTAC
ACAATATACCAACTTCAGCTGTATTTGAAAGTTCAGAGAAAAGCATCGAA
TCACAAAGCCCTGCTACAACCACGAGGGTTAATCTTCATCAGACATCTTC
GTCACAAATCATAGTTTTAATCAGCTCATCAAGTATCAAAACATCAACAT
CGATACCAGTTCAAATATTACCAAGCGCGTTACCAGTTAATAATGACAAA
CTAACCAAGATGGTTCTTCGAATTCCTCAAAATGTTGACGTTTCTACGGA
AGATTTCAAGAGAAAAACGACTCAAAGTTTGCAGGCTGTTTACAACCAAG
GGAAGACTAATCggaaaaggaaaagaagaaacatTGCAAATGATGTTGTT
GTTGTGAAAAGTATTACTCGTCAACCATCCAATCCTGAAGATGTGGATGT
CCGATTCTACATCGAGGAAAATGGTTCTATCTTGCCCACACAACAAGTCA
TGTCAATATTCAATAAAGTCCCTACTTCTGATGTAGATAAAGAAATGGGT
TATACTgtattAAGAATAGAGAGTGTTCAACAAACAACTACATCAGACGA
TGAGATTGCACCTTGGATTATCGTTGTAGCAGTCCTTGCACCAATTGTTC
TTTTACTGACGATTGTTTTGTTGgttagttgctatagaaacaAAGCTTTG
AGGAAGATACAACTGCATcCTTTGGTAGAAGATGAACCACAACTCTACAA
AGAGGGTTTAAACCAAAAGATCTTGACGCCACGCGAACAAAAATACACAG
ACGACAATCCACCAAAAACATTGCCACCCATTCTCTCACCTAACTACAAA
GTAAAtaacaagaagaagaaaatgccGGCAGCCGATCGTTTTGAACAATT
TGTTGAACGAGAGGAAGAAGAAATCTTACATTTCGTACCCAAAATGAATA
AGAAAAACTTCAAAGCGAATTCTCTGGTCAAACCTTTGCAACCGAACAAG
AGTATCGCGGCGGAGATTGAAGATTTGACGAGAGGTTGTAAGAAGTTTCA
AGCGAATCCGATGAGTAAGAATGTTGGCGTTCGTCTTCATGCTGATATTC
TTTCGCCACCTTCCTCTAATCGCTCATTGGCTGATGGCCAAGcaTCGACC
CATCTAGGGATGTCGTCACCATTACACCATTCACGATTTGATTCTCCAGG
AGGTCTGACATCGTCTCTCGGTGATAGTCCTGAACATCTTCGAATCATGG
AGAAGATATCAGCTCTTCAATTGACTGTCGATTCTTTACAAGGGAAAAGA
GGAACGAAAAGCGAAAGTGTTAATGAAAGGAAAAGTGTTAGCCAATCAAC
GGTGCTCAATGAAGCAGATGAAAAGCCTGATATCTCAAGGATTCGCAACA
AAGAACGTATACGAAAACGTGAAGAAGCAAAAGCCAAACGCAGGCTAAAG
CGTAATGAAGTTATCGAGTTGAACGATATGCAAAACCATGCCATCAATGA
TGAGGATGAAACCGCTGAACATTTGCCCGATATGAACTTGGACGGTGAAG
ATTACAAAAAGAAGAAGGACGCAGTCAACAAGTTgttgaagaagaaaagg
aaaatgaaaaagtcCGGGAAAATTGTACCTTCGCTTCATTCTACGGATAC
GGAAAGTCCACGTTCAATGTGTACAAGTGACGAGAATGATGAGAAACCTT
TGTTCAAACAATCAAGGAAACAACGTTTCTATAATCAGCCAGAAGATATG
TCACCTTTTCAAGGGCGGTTACCGCCATTGCATTACCCTAATCCGTACAT
GCCGGGCGTTGGCGTATTCCCACCACACCCTATGAGTGGCCCTTACCCGA
GTATGGTACCAACATTCTACGCTTCACCGACCATGCATGATGGTTACCAT
CAACCACCCAACATGTTCACCTCACCATGGGGTAGGTTACCTCAGAGTAG
GATTAGAGGTCTGGAACCAAGGATCGAACAACTATCACCTGACTCAACTG
AAAGCAATAATAATGAAGATCTTTCATCGAGTTCGGCGGGTATGGTGTTA
CCGAATGGTCGTGGTCAACCTCGCAAGAAGATACGTCACGTGACGGAACA
TGATATCGAATCATTGGAGCGAGCGCAAGCCTCCGCGCGTGCCAAACTGA
AAACGGTGCTTGATAAAGCGAGCGAAGATGCAAGGGAATTGCTACAAAGC
TCTGgaaaagAGAGTTCGATTACGTGAcgataaaagaaacaaaagtgTTC
AAATTTAGAATCTTTCGTGAGGTGATGACAGTTTCCAGCAAAAATCAATA
TCATTGAAACTTGGTGCTATGAGATCCATTGGTCCACTTGGCATTGTGAT
CTCTTGGAGAAAAAAactcttgtaaaaatattagagAAGTTTTATCAAAT
GATGAATGGAGAAATGGCTTTTTCCATGGTCCTGATTGAAACTGACTCGG
TAGAATCAACTTACACCATGTAAATGCCCGATGAAAAGTTTTGGAGAATC
ATATTCGCATCGGCATTATGAGATTaagttaaaacattttctttgacaGT
TTTCGATACGGCGAACACGTTGAGAATGGTTAAAATTCTGAGGCTTATGA
CCTGATAAAAAAGCCAACAGCTCTCGAGTTATCTGCTTTCCGTTCACCCA
GGACCCTACGAGCAGTGACAAATTCTAATAATTTGATAGTTCATTTTTTG
TTGATATCAAGTAGAACAAAAGACTAAAAATTGACGAGGAGATGAATTCG
AGAGAGTTGCAAGTACAGTCAATTTTCACTTATTTGGACCTCTTTAACTA
GCAATTCTAGAACAAGGCTTTATAGTAGGGGGCCATTCTTTAGGACCCGT
GACAACAATTTACAgagtggaattttttttgctcattcgaaagaagaatg
tatttagaaacttttttgagagggagcAAGTTAATTAGGTCcagcaattt
tttttatgggGAAAAgactgacgtcacaagcaaaaaccCTTGGGACCCGA
AATTTgacgaaatttca
Run BLAST on NCBI

transcript from alignment at sc0000048:153212..166438+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004742 ID=TCONS_00004742|Name=TCONS_00004742|organism=Clytia hemisphaerica|type=transcript|length=13227bp|location=Sequence derived from alignment at sc0000048:153212..166438+ (Clytia hemisphaerica)
taaccTGATTGTACCGCGGACAAGAGGAGAGCGATTAATGCAGCCAATCG
AACATGATTATTGAATACAATTGAAGCAGCAAggtaatcgaacagcaaat
cctggtgATATTTGATTAcaatttgattgcgttcgacaatcaaatgGCAA
TTATTTGATTGCTTATCGACATTTGGTTtgtttcgattgacatcgtctgg
tttCATAATTAAATCACAATCAAACCAATAGAATGTGTTTATCTTAAAGC
CCATTGGATGTAGGAATAATTGAGCTTATCTTATCTTACCAAGTTAAAAA
CCTAATAAATGTTTTGGTCAACAACAGGCAATCTCAAATAGACTCTTTAT
ATAGATGACTTACGAATAGATAAAACTTTTTCAGGCTAAGGAAATGAAGA
CTTTTAGACTTAATTCATAGGTTAAGAAATCCTTTAGTAATATGTTTTTT
CTTATTCTACTTTTTTCAGATGAGAGAAGACcctgcaaaataaaaaatta
tgaaaatttccaCCATCATCATAACAATATGGACTGTGTTGATGTTTGAT
AAAACTTCAATTGCATCTGCATCATCATTTATCTCCTCTAAGTCTAACCA
ACACGAATCGTTTTCATGGAGTACACAAAATTCTGGTGTTTTGACATCGG
TTGATAATCTTAAACAGCCAACAACTTTAGCTCCTTCAAATACATTCACA
ACGATGTCAGAAGGGTCAACATCAATCATCGGCCCCAGCGAATCCACTAT
AGATAATTCGCTGGATAATTCTGGAATAGTAACAACACCTGTTACCATCT
CTGAGCAATTGTCTACGTATAGATCAGAAaccattttacaaaaattttct
acgCAATCCAAACTTcattcaacattttcaaacacATTACCCGTTAGTGA
TAGCTCAATCATTATTAGTACTATTTCAGACCAATTCAACCCTTTAAGCT
CTCTTACGATAAAGAATTTACCGTCACTAACAACAGAAGTATCATTCTCA
ACACCAGCAATGGCTTCGTTAATGAACCAAGAATCAAGCTCACAAATATT
GACGCATTATACACAATCCTTATCTAGTAACATTGATGTCTCCAGTCAAT
CAAGCGGAACACAATCTTTATCCAGTAACATTGATGTCTCCAGTCAAGCA
AGCGGAACACAATTTTTATCTAGTAACATTGATGTCTCGAGTCAATCAAG
AGGAACACAATTTTTATCTAGTAACATTGATGTCTCCAGTCAAGCAAGCG
GAACACCATCTTTGTCTAGTAACATTGATGTCTCAAGTCAATCAAGAGGA
ACACAATCAAAGACACTATCAGAAAATTCGCCAAATCTTTCTTCATCAAC
AACATCGATACAGTATCCAGactcatcttcattttcaactcAAATGCAAC
TTTCATCAGTCATAACATCCAACATTATTGTGGACTCAATAACTTTTACC
AAGACAGAATCACTGACCAAAACTAGCACACCATTGAtcgaaaatgtttc
aattttctcttCTATGGTCAATGAATCTGTTTCTACAGTAACATATTTGC
CAAGATTTACAGCAAGTCAAAGTAACTTTTTGGAAACCAAATCTTCTATA
ATGGAGGAATCAGATATCCAAAGTTCCCAAGCATCAGAAATCGTTTCgtc
ttcaaattttgattccTCCTTCATCATTTCAAGTCAACTAAATTTGATAT
CAACTGATACGTCATCGTCAGTCTTTACTTCTTCAAAAATGATAAGTGAA
TTTATTGAAAACTCAGAAACCTTACTTTATTCTAGCTTGGAAACCAGTAG
TTCTTCATTTTCTAATCTTCCTCTTTCATCCAACTATGAAGCATTTGAAT
CAATAACATTATTGACAGAGTTAGTCCAAGCATCTGCTTCCTTATTCACC
GTATCAGTTGATGTATCATTGTCCAGCATTAGATCATCTATTGACATAGA
ACAATCACATACTTTACAGAAGACTCCTGTATTTTCGACTTTCTATACTC
AACTTTTATCTACTGTGTCAACAAATAAAATCTCAAGCTCGATATCCTCA
GTAGGGAAATCCTCCATGATTCCGTCACAAATGAAGAGCTCAGAAGCATT
GGCAACATTAACATTAATATCAAACATGTATTCATCAATAAATACCAATG
TCTTGAATAGTTTTTCAACTTCCGAAACAACATCAACCAATGTTGCATCA
ATTCAACAATCAGATAGTATACTCGTTTCCCATGACTCATCATTACCAAC
AACTTCAAAAAGAGCAGAACACTCAACATTTGTATTAGGCGGTTCATCGA
GTTCATCCTTACTCCAAAGTTCCAAGAAAGTTATGGATTTTTCAAGTAAT
ATTAGCCCTGAAGTTTCTTCATTCAAGGTCGATCTGGAACCTTCATCGAC
ACTGATATTGATAGAACCCACCAGTTTTGTACACAATATACCAACTTCAG
CTGTATTTGAAAGTTCAGAGAAAAGCATCGAATCACAAAGCCCTGCTACA
ACCACGAGGGTTAATCTTCATCAGACATCTTCGTCACAAATCATAGTTTT
AATCAGCTCATCAAGTATCAAAACATCAACATCGATACCAGTTCAAATAT
TACCAAGCGCGTTACCAGTTAATAATGACAAACTAACCAAGATGGTTCTT
CGAATTCCTCAAAATGTTGACGTTTCTACGGAAGATTTCAAGAGAAAAAC
GACTCAAAGTTTGCAGGCTGTTTACAACCAAGGGAAGACTAATCggaaaa
ggaaaagaagaaacatTGCAAATGATGTTGTTGTTGTGAGTTTAAATGCT
TTCTGAAGTTTCCtaacttctttcaatctttttcaagtaAGCCAACTTTC
TGCCCTCTTTCTGCcctctttctgcctactctaacaattagaatagacag
ggcaGAAAATCAAATAATCAACCcatctcttttcttttttctccagTGAA
CAAGTCAGATAATGTCTCCATCTTGCCTCTaatttagacggccgactttc
tgccctgtcttttctaattgttagagtacgCAAATAGTGGGCAGTAAGAT
GgcttgcttgaaaaagattgaaaaaagtcATTGCCATCTATGTCAAAGGA
GGGTTAGACAACCAACTTTGTGCTCAATTTAGAGGTAAAGCAAAAAGTAG
ACCATCTAAACCAGGGCTTCATCTCTATATCAAAAGTCAACGTTTACTGT
CATATGCATCAAAGTGGATTGTGAATTTGTTCTTGTAATCGCATCTTTTT
CCATTATCACTTACAGGTGAAAAGTATTACTCGTCAACCATCCAATCCTG
AAGATGTGGATGTCCGATTCTACATCGAGGAAAATGGTTCTATCTTGCCC
ACACAACAAGTCATGTCAATATTCAATAAAGTCCCTACTTCTGATGTAGA
TAAAGAAATGGGTTATACTGTAAGTCTAGTATCTTTTTTTGATCTCCTCG
TTTCTGATGCCTCTTAAATTAgtgaaacattttattttgattcTCTTAAA
AATTCATTGTTTGGAATGAAATGAAATGTTAGATTGGTTAAGGCGCCTGT
GTGGCCAGACCAGTCAGGTCCGCAGTTTAAATTCTCGCTCATTGCAATGT
CAAGTTCTGCTCTTAGATAGATGAGCCGCCTGAAAACAACCAAAAGACTT
CCCAGATTACTAGGGTGCCCATCTTAAATGTGGACTCTATCTATGAGATA
TATTTTGATGGGAACACAAAAAGACTTTCCACGACATTCTTTCGGAGAAA
AAAAGGGGGTTTTCAGTCTTTTAATTCCgaaagaaaattgttttgattat
CACACTATGAGCTCGTTAAAAATGAGAATCGATGTTATTCATCAAAAAAC
TGGTTCATCCCAGAATCTTAATATGTCGTTGTTGTAGGAACTTGGAGGGT
CAGTGCAAAACCTGGCCTACCTCTGTTGCCCGGTTATATGGCCTTCCTTG
GCCATATTGGCCCACCAAAAAATCTATTTAGACGACCCTTAGGACCTTCG
GACCAAAACATGGTGAAAGTCTTTTGATCCGAACCAGATTCGAACTCTTG
CCCTGATAGTGCGTGAAGCCTTGGGCAACTGGCTGACTTCTGATAAAGCG
CTGGGAAGACTTTTCAGGGGTGTTCATGGGCTTGCCACCGAGCTCAAAAG
GGACACTTAGAGTATTGCAAAGGTGCAAAACAAACATGGAAGTAATGGAT
GCTTTGTTCACAGAAGGGCTACTTTCTCAATGTTTAGTTAAATAGTTTGT
ATTGTATTGGGTGTATGCCTTTTTCTGTATTCAACATTCAACATAAAGTT
AGAATGGTTCGAAGAATTGTTATTAAACATAATTCTGTTCTTCAGAgtcc
tgttcaattttttctgaatGGAACATAAAAATGACATCAATAATTTACAA
ATCCATTTTTATTCATTATACTCCATGTAGGGAAACTTCAAATAATTCTT
tcacttttaataaaaatattttttcagttGTTATTAGCAACTAAATATAA
ATGTGAAAAGCAAAGTGAACATATTGGAATTAGACGTTTCTCTTCATGTG
CGAAGTAAAGGGGAAAGTTTTAAGGAATTTTTTGTCTTGTTATTTTTACC
TCAAGTTTCAATTCTGGATGAACATTGCTTTTAAAACCGCTATCTTTATA
ATAGAGAGTCGCCGTTTATTCTCAAATGTAAACTGTAccgtatttttttt
tcttcagaatcTTTTCCCTCTAACATCGAAGGAaggctaaaaataaaaat
gtctatCTTGTTGAAAAGTTGGAAGTTTTACTCTTTAGGCTCCTCCTTCA
CATAGGTTTCTTGCGTTGTCTTAAGAATACGATATAATTCGTGCTTATCA
TCCGAGTTTTTGTAGAGATGTGCGCTTCAGACTGACTGTCATCCAAATCG
taaagatttccaaaatatatttaatatacAGGGAAGGTGTATATGATGAC
AGTCTGAGATTTGAAAGTCTGGAAAGTTTAATTAAAACTGTACACTTTGA
AGGAttctaatttttcaggtattAAGAATAGAGAGTGTTCAACAAACAAC
TACATCAGACGATGAGATTGCACCTTGGATTATCGTTGTAGCAGTCCTTG
CACCAATTGTTCTTTTACTGACGATTGTTTTGTTGgttagttgctataga
aacaAAGCTTTGAGGAAGATACAACTGCATGTAAGTTTTCACCCCTTTTG
TTATCCTTGATAAAAAACGTTTCTGTTGAACTTTAGATATATGTTATCCT
CGCAGATTTGCAATAGCCGTGTCTGATACAACCTTTAATATTCTATCAAG
TCGTGATGAAGAGTGATTGGCTGATTTTTTCAAAGTTCGAGTCCTAACAG
ATCCTAATAAAACGttttaaatttgtatatgtaatcacatgataacgagt
gcaattcgagaataattgcacgagtgatttttttgttattaattcgGAAC
AAAACAATcgcgagtgcaattttcgaattgtacgagttattatgcgatta
cgagctaatcgcactcATATTTTTCTCTCAAAGAGTGTGATtgacgatta
attgctctctacaggatgcagtTAATGATTAATTGCTCTGTTTGAAGgag
cgccaaataagaaaaaataactcatcgtgcgattatgcCCATTATTATCA
AGGTggagatttttcattttcaatgtttcagtttttattttctttaagcC
TTTGGTAGAAGATGAACCACAACTCTACAAAGAGGGGTAAGAAATATATC
TTTCTCTCAACCCTAGGGCTTGTCTCGGCAAGTGGGTTGAAAAAAGCCCG
TTTTGGGATAAATTTCGCGTCGACTTTTCACGTGAATCGAAGATCTAAAA
GTTTTGCGTGGACAATTTTGCGAATCGGCCACTCTTTGAcctaatttctt
ttattttcctagggattttggCAGAAATccagttttttaatttttcgtgA
AAGTTATCAAAATGGATGTTATTTTTCAGTTTAAACCAAAAGATCTTGAC
GCCACGCGAACAAAAATACACAGACGACAATCCACCAAAAACATTGCCAC
CCATTCTCTCACCTAACTACAAAGTAAAtaacaagaagaagaaaatgccG
GCAGCCGATCGTTTTGAACAATTTGTTGAACGAGAGGAAGAAGAAATCTT
ACATTTCGTACCCAAAATGAATAAGAAAAACTTCAAAGCGAATTCTCTGG
TCAAACCTTTGCAACCGGTATGGAAAATTTTATAACTATCTTTTTTTGTC
AACAGTTGGCGCTGATTTTAAATGGTGAAGCTTCGTCGTAATTTCTTCAT
CGGAAGGTTTTTCCGCTTTTGCTGAAGAAATTTAGCActtcaaaatgttc
ttacctACAACAGATCAAGCGTGTAGTATACTTAAACATAATCTCGAAAC
CTATTTCTTTGATAAACAGTCTCTCTAGATTTTGGTTTTTTCTTATTGGA
CCTTTTATTATAAACTTTCCTTTACATCTCCTTTTTACTGCTATATTGGT
TTTCCAGGTTTTGCCAAAATTACGTAAATAAAGGAAATCCACAATTACGG
AAACAGACGTTCGAATTTGCAGAGGTGACCCCTTACGCagatcgaacgtt
tgcttccacaATGGCGAAAGTTACATAACTTGAAAAACCTCTATGCTTCT
TACATTTTCAGAACAAGAGTATCGCGGCGGAGATTGAAGATTTGACGAGA
GGTTGTAAGAAGTTTCAAGCGAATCCGATGAGTAAGAATGTTGGCGTTCG
TCTTCATGCTGATATTCTTTCGCCACCTTCCTCTAATCGCTCATTGGCTG
ATGGCCAAGGTAACCAAGTgttgaaatacacgttttttaatcgacttcgg
gtctTCTCAATTTTAAGCCtatgagttttaagcctaaaattgttcttcaA
ATGTtctcttttttaatcatttttcaccgttttgtgagtatttttgtgcg
attttttaagaaacatggcGTGTTAGAGCTTGCAAAGCCTAAAATAAATG
TATTCAACTTATTCTTAATACATATTTTTGCCCTCAAAGCCTTGgctttt
taaatactatttcgttcttataaaaagacatcCTAAGTGTATTCCCGCCC
ACTGTACTGCCATACAATACCTATGTCGACAAATTTTCCTGGATGATTTC
AAGACACTTTTATAAAAGAACACACATTTATAAAAGGTTaacattttaaa
ggtttttttaaaaataattttctagcaTCGACCCATCTAGGGATGTCGTC
ACCATTACACCATTCACGATTTGATTCTCCAGGAGGTCTGACATCGTCTC
TCGGTGATAGTCCTGAACATCTTCGAATCATGGAGAAGATATCAGCTCTT
CAATTGACTGTCGATTCTTTACAAGGGAAAAGAGGAACGAAAAGCGAAAG
TGTTAATGAAAGGAAAAGTGTTAGCCAATCAACGGTGCTCAATGAAGCAG
ATGAAAAGGTATGGCGGGCTGAATGATGTATTTAATAATAATGTTAGTAA
TAAACATCAGTGTTAAAAGCTCTTCAGAATCAGACCGATTTCCGTCTCAG
CAAAGTTTAAAGATGTTTtcccgtctcaaaattctgcataattcaccaaa
ttttaagaaaatatgcTGATTTTCTTCGTAAAATCGCTTTGACCATTCCA
TTTTCCATTTCGGATTTTCGGATTTCACTTTATTTCATTTCAATGTTCTG
TTAATTTCACCCTTACTACCGTAAACCAGTTTTCCTCCAGGATTATAAAA
TTCTAATCAGCACGATGCACTGTCACACTTATTTTAGTTCACATTATGCT
GTAACTTGAATTGTTTTACAATCTTGTACCAATGAATAAGGCTCTATACA
GCTAAAAACGTTTAACAAAAATGTGTTTACCgattgtttttaatcaaaag
tggGATATGTGAATGCTTTTAAAAACAGACATACACCTTCCAAAGTAGGA
ATAGGCCCTCCAACCTAAACAGATAAAGACGGACGGGGGTTTTGTCCGAA
ATTAAGGACAAATAATTTTTcgtatttttagaaaaatcattttAGATTAA
AATTCACTGCTCAGGAgatgaatttttcatattttcattcatAATCTTTT
AGCCTGATATCTCAAGGATTCGCAACAAAGAACGTATACGAAAACGTGAA
GAAGCAAAAGCCAAACGCAGGCTAAAGCGTAATGAAGTTATCGAGTTGAA
CGATATGCAAAACCATGCCATCAATGATGAGGATGAAACCGCTGAACATT
TGCCCGATATGGTATGCGAAATAATGTTTCGTTCAAATTGTCTTACTTTT
AAATTCGTGAAAGTCCAAGTCAAACACTTGGTTGATACGTAACTTTCGAA
AAGCTTATAACAATGGGCTGttccaaaaaatttccatacattgggggggg
gggggggggggaacctTTTCAATTCAATACGAATTTTTGAAATGTGTTTG
CAAAAAAGAACCTGGAAATAATCCTTTTCATGatttaaagtgagggtgga
cgagtCAGTCCTTTACCCCTGGAAAGTTTAAGAATCGATTTTTACTCCct
ggaaaaacgaaaaaacacaTATTTAGACCTCCTGGAAATTTCGTCCCGGA
TTTACCCCCCttgaaatgttcgtccaccccctggaatggttataaaatgg
aatgacccaATCTTGTTTTAGAGATATTTTTGTTATGTCCGTAAAATATA
AATCACTCTAAAAGCAATAGGTATAGGAAAGGACTCTAATTGTATGTCTT
CCAGGGGAATAAGAGAAAAGTAATTTTACTTCATGTCTAAACATATGCGG
AATTCATTCACACAGAAAAAAATATGGAGCCTTGGCGCGGTTTAAGATTC
TTGAAGTAGACTTATTTTCAGAACGGAGTTCATAGCGTTAAATTTTATAT
TTAACCAAACTTACTTTTTCTTCACAGAACTTGGACGGTGAAGATTACAA
AAAGAAGAAGGACGCAGTCAACAAGTTgttgaagaagaaaaggaaaatga
aaaagtcCGGGAAAATTGTACCTTCGCTTCATTCTACGGATACGGTAAGT
TGCGTATTTTAATCCAGTTATAAGAAGTGCAGcgagaaaaagaatgaaaa
tttttacaCGGGCGTATTAACAGGTACCCTACTTATCAGTgaaattctgg
tctgtaatttaaACGAAACAGATCTTAAGTGAAATACGTTCTGGTGAAGA
GGTTCTGGTGAAGAGGTTCTGGTTACCTGAAATAGCGACCCTATAAAATT
TTCCTATATACATAAAAAAGATAACAAATAGCTATTACTTAACCAACCAG
TTTCTTGAAACCTGGAGAGTATACACCTATCAACCTTTAACGGCGCGGAC
GATTTACCAGGggactggtaatgaatttacaaggaaatgACAGCGAAATA
TTTTGTCTTTGGGAATGTTAACGTAACGACTCCAGTCATTCTGACGTCAT
TCCTTACTGGTAAACTCGATTCCAGATTGGCAGGTGTAATAAAACTGCCC
TCATTCTCAACGAAGTGTAATACGTGAATAAATACTCATGAAAGAATGAC
TGTTTTTATCATTTCCAGGAAAGTCCACGTTCAATGTGTACAAGTGACGA
GAATGATGAGAAACCTTTGTTCAAACAATCAAGGAAACAACGTTTCTATA
ATGTAAGTGACTTGTTGCTCTAACCGTTCGCGTTTGTTGCCGGGGTTTTT
ATCCAAACAAACACGATGAAGGCTGAATTATTCGTTGAAAATTTGTCTTC
GTTTCCAGgatgaaaattatgaacatcagCCGATTAATTGCTCGAATCTT
GATTTATGGCTATGACTTTGAATCATGCCGaggtataaaatttcaaaaaa
gtaaaacatcACTAGCTtcatttttgctgaaaatgacTCATTATCCTGTT
CTTCTATTCTCTTTTCAGCAGCCAGAAGATATGTCACCTTTTCAAGGGCG
GTTACCGCCATTGCATTACCCTAATCCGTACATGCCGGGCGTTGGCGTAT
TCCCACCACACCCTATGAGTGGTAAGCATTGTTCTTAATCATCGATCTTA
GCACAAGGAgtatttgacaaattttcttGTTACCACAAATCTACATATAA
AAATGTCCTTCCCTTCTTACTAGGCCCTTACCCGAGTATGGTACCAACAT
TCTACGCTTCACCGACCATGCATGATGGTTACCATCAACCACCCAACATG
TTCACCTCACCATGGGGTAGGTTACCTCAGAGTAGGATTAGAGGTCTGGA
ACCAAGGATCGAACAACTATCACCTGACTCAACTGAAAGCAATAATAATG
AAGGTTAGGGTTCTTTATTTAGCTTATTCGcctattttcaacatttcttt
CTGGGTGGAACAAAATCTTAATCTCGAACAGTTTGAGCTGAAAATCCTAG
CTTTTCCAATTGATAGGACTTTTTGGTTAGAAATGTCATGGTTATGAGCC
TTGATTTTTAGTCTGTGTTCTTGAAACATCGAAATTTCCTATAGAATTAT
GAACGATTATATGACTGTAGGAGATAATCTATCGCATTAACAACATAAAT
TTTGACGCAGTAAAAATAAAGCTCTTCTATTGTCTGCTTTGCAGATCTTT
CATCGAGTTCGGCGGGTATGGTGTTACCGAATGGTCGTGGTCAACCTCGC
AAGAAGATACGTCACGTGACGGAACATGATATCGAATCATTGGAGCGAGC
GCAAGCCTCCGCGCGTGCCAAACTGAAAACGGTGCTTGATAAAGCGAGCG
AAGATGCAAGGGAATTGCTACAAAGCTCTGGTGAGTGTTTATAATCGGAT
TTTTGGGCAGACCTGGGTAGACTTAAGCTTCCTCATAAGTATAAGAAGTA
GTCCCGAAAAGTTCATTGTCTTTTTATGTCCGAAAGTCCTGAGGGGATTG
TGTTTTTACTCTGTGGTACTCTGTACCAGATTCTTAAATAtaactactct
taggttccaaataaacgtcccctcccgcttattaatttttcgaagatCTT
CCAACCCCCCAGTCCTTATTAGGACCCaattttttgagaatattttcagc
tgtcaaagtgaaggccccttattttgctctaaatagcctgattttagcct
atatttaccttatttttcggttttcagaagtacaatttccaacccccagc
ccggcaattaggtccaaTACCCACCctcgtttattaaaatctcgaaaatt
ttccaaccccccccccctttattcgAACNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNcccccccccctttattcgaagtcccccctgttt
atttagaacctaagagtaatcGTAGAACGGCAGTGAAGTTTAAAATTTCC
GTATATTGGGTCTGCTGCTTACAGAAAGGCTTAGTGGATGGcggtcaaaa
ataaaaatgatgaaaaattctgAACGCTTGCACCATAGTATAGCATAAAA
TCTAAGATCGGATCTTAAAGCCGAAACTTTTTATTTCTTCCTCTTCCTTG
CACGAAAGAAAAACTAATTGGGTTTTCTCATCTATGTGCGTATGTAACAG
GATACAAATTTTATGATTTATCTTTTACGAAACAAATGATGCCTTCTGGT
AATCAACATTTTGGATGTCTTTTCAATTTTGCTTCCTGTTTGGCATGTCT
TCTGTAAAAAGACAACCAAGCTTGTATAGTTGTTTCGATACCTAATGGTT
GGGTAATTTTTAAGTAGCCGGCtcatattttctttcaagtcaaaaaaccg
CTAAGTAAAACATTGCTCGTTAATTATTAAATTTTGGAAAAGCTGTGTCT
AGGAAACAGTTTCCTAGCAAACAAGGAATTACTATACAAGTTTCTACGGA
AATTTGAATATATCGCGAACGTTGACTGGCTGGTATTTCCTATTAGACCA
CCAAAAGAAAAGTAATTTCTCATGGATTGTTTGTGAACTAAGAATTTCCT
AGTTGCATCTTCCTGTCAAAGTGTTTCTCTCTTGGTGGTCTAACAACGAT
TACAATATTCCAATACCATAGAAACCCATATAGTATCCCCCTGTTTGTCT
GTTTGTCTTGGATCTGTTACATTTACGTAGCTTCTCAAAATACTTCGATC
AATGAGTGACTTCACAAAGCCAAGTAAGATTTTTAGCGAAGAATCattga
tacaccttttcgaccgtagtcgcgcgggtaTTTTtctgtccgctttatcc
cactaaaaccgtcccaatccttttttgacgcatttttctattgtctattt
gTGCGAAGAAAGggctgggacggttttagtgggataaagcggacaaaaaa
atgcccgcgcgactacggtcgaaaaggtgtattgatcaTTAGCtactatt
aattttttttccaggaaaagAGAGTTCGATTACGTGAcgataaaagaaac
aaaagtgTTCAAATTTAGAATCTTTCGTGAGGTGATGACAGTTTCCAGCA
AAAATCAATATCATTGAAACTTGGTGCTATGAGATCCATTGGTCCACTTG
GCATTGTGATCTCTTGGAGAAAAAAactcttgtaaaaatattagagAAGT
TTTATCAAATGATGAATGGAGAAATGGCTTTTTCCATGGTCCTGATTGAA
ACTGACTCGGTAGAATCAACTTACACCATGTAAATGCCCGATGAAAAGTT
TTGGAGAATCATATTCGCATCGGCATTATGAGATTaagttaaaacatttt
ctttgacaGTTTTCGATACGGCGAACACGTTGAGAATGGTTAAAATTCTG
AGGCTTATGACCTGATAAAAAAGCCAACAGCTCTCGAGTTATCTGCTTTC
CGTTCACCCAGGACCCTACGAGCAGTGACAAATTCTAATAATTTGATAGT
TCATTTTTTGTTGATATCAAGTAGAACAAAAGACTAAAAATTGACGAGGA
GATGAATTCGAGAGAGTTGCAAGTACAGTCAATTTTCACTTATTTGGACC
TCTTTAACTAGCAATTCTAGAACAAGGCTTTATAGTAGGGGGCCATTCTT
TAGGACCCGTGACAACAATTTACAgagtggaattttttttgctcattcga
aagaagaatgtatttagaaacttttttgagagggagcAAGTTAATTAGGT
CcagcaattttttttatgggGAAAAgactgacgtcacaagcaaaaaccCT
TGGGACCCGAAATTTgacgaaatttca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002684XLOC_002684Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004742-exon-sc0000048-1491911889:153212..153294TCONS_00004742-exon-sc0000048-1491911889:153212..153294Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:153212..153294TCONS_00004742-exon-sc0000048-1510915933:153212..153294Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:153212..153294TCONS_00004742-exon-sc0000048-1575043694:153212..153294Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:153681..154388TCONS_00004742-exon-sc0000048-1491911889:153681..154388Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:153681..154388TCONS_00004742-exon-sc0000048-1510915933:153681..154388Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:153681..154388TCONS_00004742-exon-sc0000048-1575043694:153681..154388Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:154485..155996TCONS_00004742-exon-sc0000048-1491911889:154485..155996Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:154485..155996TCONS_00004742-exon-sc0000048-1510915933:154485..155996Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:154485..155996TCONS_00004742-exon-sc0000048-1575043694:154485..155996Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:156478..156630TCONS_00004742-exon-sc0000048-1491911889:156478..156630Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:156478..156630TCONS_00004742-exon-sc0000048-1510915933:156478..156630Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:156478..156630TCONS_00004742-exon-sc0000048-1575043694:156478..156630Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:158230..158391TCONS_00004742-exon-sc0000048-1491911889:158230..158391Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:158230..158391TCONS_00004742-exon-sc0000048-1510915933:158230..158391Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:158230..158391TCONS_00004742-exon-sc0000048-1575043694:158230..158391Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:158910..158947TCONS_00004742-exon-sc0000048-1491911889:158910..158947Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:158910..158947TCONS_00004742-exon-sc0000048-1510915933:158910..158947Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:158910..158947TCONS_00004742-exon-sc0000048-1575043694:158910..158947Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:159191..159428TCONS_00004742-exon-sc0000048-1491911889:159191..159428Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:159191..159428TCONS_00004742-exon-sc0000048-1510915933:159191..159428Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:159191..159428TCONS_00004742-exon-sc0000048-1575043694:159191..159428Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:159873..160020TCONS_00004742-exon-sc0000048-1491911889:159873..160020Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:159873..160020TCONS_00004742-exon-sc0000048-1510915933:159873..160020Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:159873..160020TCONS_00004742-exon-sc0000048-1575043694:159873..160020Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:160437..160669TCONS_00004742-exon-sc0000048-1491911889:160437..160669Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:160437..160669TCONS_00004742-exon-sc0000048-1510915933:160437..160669Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:160437..160669TCONS_00004742-exon-sc0000048-1575043694:160437..160669Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:161314..161472TCONS_00004742-exon-sc0000048-1491911889:161314..161472Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:161314..161472TCONS_00004742-exon-sc0000048-1510915933:161314..161472Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:161314..161472TCONS_00004742-exon-sc0000048-1575043694:161314..161472Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:162139..162255TCONS_00004742-exon-sc0000048-1491911889:162139..162255Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:162139..162255TCONS_00004742-exon-sc0000048-1510915933:162139..162255Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:162139..162255TCONS_00004742-exon-sc0000048-1575043694:162139..162255Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:162780..162863TCONS_00004742-exon-sc0000048-1491911889:162780..162863Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:162780..162863TCONS_00004742-exon-sc0000048-1510915933:162780..162863Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:162780..162863TCONS_00004742-exon-sc0000048-1575043694:162780..162863Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:163130..163232TCONS_00004742-exon-sc0000048-1491911889:163130..163232Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:163130..163232TCONS_00004742-exon-sc0000048-1510915933:163130..163232Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:163130..163232TCONS_00004742-exon-sc0000048-1575043694:163130..163232Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:163335..163514TCONS_00004742-exon-sc0000048-1491911889:163335..163514Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:163335..163514TCONS_00004742-exon-sc0000048-1510915933:163335..163514Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:163335..163514TCONS_00004742-exon-sc0000048-1575043694:163335..163514Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:163806..163991TCONS_00004742-exon-sc0000048-1491911889:163806..163991Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:163806..163991TCONS_00004742-exon-sc0000048-1510915933:163806..163991Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:163806..163991TCONS_00004742-exon-sc0000048-1575043694:163806..163991Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1491911889:165626..166438TCONS_00004742-exon-sc0000048-1491911889:165626..166438Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1510915933:165626..166438TCONS_00004742-exon-sc0000048-1510915933:165626..166438Clytia hemisphaericaexon
TCONS_00004742-exon-sc0000048-1575043694:165626..166438TCONS_00004742-exon-sc0000048-1575043694:165626..166438Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:153212..166438 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.77783	2.07941	1.64859	5.31192e-06	38.3779	25.0295	15.9208	19.0203	9.24956	14.3855	8.36788	10.2114	2.75585	2.37207	2.92452	3.00315	3.565e-06	0.568735	0.686419	3.24807	1.35016	3.35833	3.84598	2.31229	3.40122	4.91986	3.81521	7.48246	0.777093	1.6301
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004742 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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