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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004704 ID=TCONS_00004704|Name=TCONS_00004704|organism=Clytia hemisphaerica|type=transcript|length=1208bp
ATGCtagtcaaaaatagtgtgacatttttatttctccaaaaaaacaccaa
atttagaattttgtcAATAACTTTCTCAAATCTTGGTATCCTGAAATAAG
ATTTCAGGAGGTGATAGAGCTAATGAAGACAAAGCCATGGATATAGGCAT
TTCCCTTATTCGAGCCAGTTTGAAGTTGACAGACCAAAAATGACCATTTC
AAGGAAATGTCATCCTCAGAAAAGGGAACTAAAAAGGAAATGTAAAAAAT
GGTGAGAATAGCCTCCTGGATAGTAATACAAGacaaaaagtgttaaaaga
aCCAAGATTTCATGTTATATTACCTAATTTGAGGTTGACAAAGTCGAAGT
tattaaaatgcactgtaaaccTCAAAATTTGGACTTTGAACATTACAATA
AGTTTTAAGTAAGGCAAAAAAGCTAAgcaaagatagatttttaaacaaaa
cccATTAAAATGAGCTGTTTTTGAGGTTGACAAGCCGCAAAAGTCTGTAT
TGAGTCAAAAGTGGGGAGAAAAGGCTTTTTGGGCTGTCAACCTTAAAAAA
CGCTTCAATAACCATTTGAATCCAATTCCATAGTCTTTCtgtcttaaaaa
caaatataattgaggtttacaaatgattttaaaagagCTTCTGGCTGTTT
CCATCATAAGACACTTTACCTTGCATTGAAATAAACGTTGTTGTAAACct
caaaacttgctcaaataaCAGATATTTCcttggaaaaagatttttagatg
gtcaataatgatattttgtaagCCAAAGTCATCATATTGATCTACCTTTG
TCAAAATTATGCACAAAACTAATGTTAACCTCATTTTTGGAGCCATTTAA
taattgtcaacctcaaataaCACCCTTCATAGCAATTTTCAACCATTTGA
GATAATTTCAGAGCTATAACATATCCAAAATCTAATTCAAAAGTCAACTT
ACAAGGTGTCAAAGAGCCCTAACAGTGTCAACCTCAGGTCATGTTAACCT
CAACTTTGGCTCCCACTTCAAAAAAGCGTATCTCGAGTTAGGGTAAACCT
CATAAAAAGATACTTATATGCCTAGAAAGCAAAATTATTCAGCCTAACCA
TACTAAAGTTTCAGTTGTCAACCTCAAACTTAGCACATTTTATGGGGCTA
AATGTAAACCTCgacaaaaatgtcacaaataccccctctatttttgacca
gcatcact Run BLAST on NCBI transcript from alignment at sc0000047:1614..2821 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004704 ID=TCONS_00004704|Name=TCONS_00004704|organism=Clytia hemisphaerica|type=transcript|length=1208bp|location=Sequence derived from alignment at sc0000047:1614..2821 (Clytia hemisphaerica)
agtgatgctggtcaaaaatagagggggtatttgtgacatttttgtcGAGG
TTTACATTTAGCCCCATAAAATGTGCTAAGTTTGAGGTTGACAACTGAAA
CTTTAGTATGGTTAGGCTGAATAATTTTGCTTTCTAGGCATATAAGTATC
TTTTTATGAGGTTTACCCTAACTCGAGATACGCTTTTTTGAAGTGGGAGC
CAAAGTTGAGGTTAACATGACCTGAGGTTGACACTGTTAGGGCTCTTTGA
CACCTTGTAAGTTGACTTTTGAATTAGATTTTGGATATGTTATAGCTCTG
AAATTATCTCAAATGGTTGAAAATTGCTATGAAGGGTGttatttgaggtt
gacaattaTTAAATGGCTCCAAAAATGAGGTTAACATTAGTTTTGTGCAT
AATTTTGACAAAGGTAGATCAATATGATGACTTTGGcttacaaaatatca
ttattgaccatctaaaaatctttttccaagGAAATATCTGttatttgagc
aagttttgagGTTTACAACAACGTTTATTTCAATGCAAGGTAAAGTGTCT
TATGATGGAAACAGCCAGAAGctcttttaaaatcatttgtaaacctcaat
tatatttgtttttaagacaGAAAGACTATGGAATTGGATTCAAATGGTTA
TTGAAGCGTTTTTTAAGGTTGACAGCCCAAAAAGCCTTTTCTCCCCACTT
TTGACTCAATACAGACTTTTGCGGCTTGTCAACCTCAAAAACAGCTCATT
TTAATgggttttgtttaaaaatctatctttgcTTAGCTTTTTTGCCTTAC
TTAAAACTTATTGTAATGTTCAAAGTCCAAATTTTGAggtttacagtgca
ttttaataACTTCGACTTTGTCAACCTCAAATTAGGTAATATAACATGAA
ATCTTGGttcttttaacactttttgtCTTGTATTACTATCCAGGAGGCTA
TTCTCACCATTTTTTACATTTCCTTTTTAGTTCCCTTTTCTGAGGATGAC
ATTTCCTTGAAATGGTCATTTTTGGTCTGTCAACTTCAAACTGGCTCGAA
TAAGGGAAATGCCTATATCCATGGCTTTGTCTTCATTAGCTCTATCACCT
CCTGAAATCTTATTTCAGGATACCAAGATTTGAGAAAGTTATTgacaaaa
ttctaaatttggtgtttttttggagaaataaaaatgtcacactatttttg
actaGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004704-exon-sc0000047-1491911889:1614..2821 | TCONS_00004704-exon-sc0000047-1491911889:1614..2821 | Clytia hemisphaerica | exon |
| TCONS_00004704-exon-sc0000047-1510915933:1614..2821 | TCONS_00004704-exon-sc0000047-1510915933:1614..2821 | Clytia hemisphaerica | exon |
| TCONS_00004704-exon-sc0000047-1575043694:1614..2821 | TCONS_00004704-exon-sc0000047-1575043694:1614..2821 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000047 | supercontig | sc0000047:1614..2821 . |
Blast
The following BLAST results are available for this feature:
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