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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004659 ID=TCONS_00004659|Name=TCONS_00004659|organism=Clytia hemisphaerica|type=transcript|length=1125bp
NNACCAATAAATGTCTTTTAGTGTGTAAGTAATTATCTACTGGTTATCCC
AGGCACACTTACAACTTCCAACTGatacaattaaaaataaaaaacatttc
attaaGTCAgggaaagacttttttattttattttttaatttttaatggaT
AAAgttctttgtgaaaaaaaaactgttGTCCAACCGTTATATACCCTACT
TTTATCAAAGACTGTATAATATGCTCCTTGTATTcttctttctgtttttc
tttctgttttaatttttaggttCTACCCTTCATTGGCAAGGATCAATTTG
AATCAAGTCGAGATGTATCAACATTCTTGCAGAACCTCATCATGCATGAA
GATGTATATGCTGTCATAACGAGAGGTCAAAAGTTTTTACGATAGCAGCA
CCTTTACATATCGCAAAAAATTTTGAGTACGCATTAAAACCAGAAGCTAC
GCTGTCAAAGAAACGTCGTTGAAAATGCTGTTTGGGTTTTGGTAGTCTAA
TTCAGTCTTGACGAATATGAACTGAATCATTGTAACAATAGTGAGACTTG
GAATGCCTTTTTCCTACCAAATATGTTCATCACATATACACAACCTCAGC
AACTGTTACCTCCGTTAAATTATGAAGAATAATTAGTTTGCAAGTAATAT
CCAAAGTTAATATCCAAATTGATGTAATTCAGCTTAACAAACCTCTTGAT
CTTGTGCATCGTATGGAAGATTTGTACCTAAATAGCTATGCACTTGGacg
ttttgaaatttaattttggaaaaatttgtcCAAGATCGGGCGAAGAATAG
GGAATTTTATTGAAGCTTGAATTAATCTAGGTACGAAGTGACTCATACAT
TAAAGAAATATATTAATTAGATAttgcttttaatttttattctatTCTCG
GATACTTAATAAACTTCCCACTGGAAAGTGCTAGTGAAAAAGAGTCTAGG
CCTAGAGCACGcgaaaaaaacaaatatgacATAGTTCCCGCCAACGTTCT
TTATAAACAAGCACCCACAGTACACTCTTCAGTTGAATATTATGTCCTCC
CATcacgaatttttcgaaaaaaactgcCGTGAATTGGCGCATGCGCAAAT
GTAAGTGTCGCGCTGTAATTAGCCG Run BLAST on NCBI transcript from alignment at sc0000047:86829..89197- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004659 ID=TCONS_00004659|Name=TCONS_00004659|organism=Clytia hemisphaerica|type=transcript|length=2369bp|location=Sequence derived from alignment at sc0000047:86829..89197- (Clytia hemisphaerica)
NNACCAATAAATGTCTTTTAGTGTGTAAGTAATTATCTACTGGTTATCCC
AGGCACACTTACAACTTCCAACTGATACAATTAAAAATAAAAAACATTTC
ATTAAGTCAGGGAAAGACTTTTTTATTTTATTTTTTAATTTTTAATGGAT
AAAGTTCTTTGTGAAAAAAAAACTGTTGTCCAACCGTTATATACCCTACT
TTTATCAAAGACTGTATAATATGCTCCTTGTATTCTTCTTTCTGTTTTTC
TTTCTGTTTTAATTTTTAGGTTCTACCCTTCATTGGCAAGGATCAATTTG
AATCAAGTCGAGATGTATCAACATTCTTGCAGAACCTCATCATGCATGGT
AAAAATGTTTTACAAACATCTGTTTTCCTCAAACCTCATTTTTCTTGACA
AAATGCTATTCGAGCCTCAGATATATTTCTTCTGCAAACAACAAAGAGTG
GCTGAATTCTTTTTCCTCTTAGAGAGACGTTGTTACAATGAAAGGGTAAT
TAGTCCTCTCTGGGTCCCTCTGTCTTTTATCCTGGCTTGGGACAGGTTGA
TTGTCATTTAAAAAAGTCAGGCGACATTTATTGTAATTTATTCATAAGAT
ATAGCAAATTATATCATACCTTAATGCCTTAAATTTTCGCGCCTTTCATT
TTCGCGCATCCCTTAAAAACGACCTTTCCCTAACCCCTATTATTATCAAT
TTCTGAGTATCCTAAAATCTGTTTCTCTATACATATTTTTTTCTGGCCGT
TTTCTAGTCAAATCCTCATAAAAAGTCTCCAAAAGGCGGTCACTAATCTT
TCCCCAGCGGTGTCCGCTAATTAGAGGCTCTACTGTACTATGAATAATAT
ATTTTAAAATAGAAAATCATGATTTATTGCAAGACAAGTCAAGACACAAG
CCAAACCTATTTTCTTCTTTCTATACTCTTATTTTTGGTGAGGGGCGGGA
GCAAAGAGAAGAGGCGATCCTTAGAAAACGCCCTAGGAAAAAACTCTACC
TTAAGAAAATTGTAAACCAAACAAAGAGCGGTTCATAGAGGCCCATGTGC
TCGCACGGTGGCCTACGAACTTGTATAGCATTATTATTATTATTGTTATT
CATATTATTGAAAAGCCATAAGTGACTTAAAATTTGCTAATTAGCGCACC
TTTCAATTTTCGCGCGGCCTTAGTGCGCTATTAAGGTACGTGAAAACTAA
ATGCATTAAGGTACGAGGAAAGATATTTTCCTTAACAAATCCTTACAATG
AGTAAAATGTACCCCCTAAACTCGGGTCCAGTATGAAAGTTTGACTAGGA
ATTAGCTTTGGAGACCAAGAAATTCTTAAACTAGGATAGTTGAGGATTCC
AAAATTGTATAGTTTATCCTGTAGAATCTTGGGTTAAGCAAAATGCCCTT
TTTCAGGTGTGGCTCCCGGACTATTCATATTGCTAAGTTTCTTTTTAGCT
TAGGATTCTTAGTAAAAATTGCATTTCGTGTTAACTAACTTACCTGGTAG
ACACTCAAAAACGCGAAAATAGTTCTCTTAAGATATCTCTTTCACAATTG
AATTATACATTGTATAAAAATTGTTTTTCTGCTTCTTTTTAGAAGATGTA
TATGCTGTCATAACGAGAGGTCAAAAGTTTTTACGATAGCAGCACCTTTA
CATATCGCAAAAAATTTTGAGTACGCATTAAAACCAGAAGCTACGCTGTC
AAAGAAACGTCGTTGAAAATGCTGTTTGGGTTTTGGTAGTCTAATTCAGT
CTTGACGAATATGAACTGAATCATTGTAACAATAGTGAGACTTGGAATGC
CTTTTTCCTACCAAATATGTTCATCACATATACACAACCTCAGCAACTGT
TACCTCCGTTAAATTATGAAGAATAATTAGTTTGCAAGTAATATCCAAAG
TTAATATCCAAATTGATGTAATTCAGCTTAACAAACCTCTTGATCTTGTG
CATCGTATGGAAGATTTGTACCTAAATAGCTATGCACTTGGACGTTTTGA
AATTTAATTTTGGAAAAATTTGTCCAAGATCGGGCGAAGAATAGGGAATT
TTATTGAAGCTTGAATTAATCTAGGTACGAAGTGACTCATACATTAAAGA
AATATATTAATTAGATATTGCTTTTAATTTTTATTCTATTCTCGGATACT
TAATAAACTTCCCACTGGAAAGTGCTAGTGAAAAAGAGTCTAGGCCTAGA
GCACGCGAAAAAAACAAATATGACATAGTTCCCGCCAACGTTCTTTATAA
ACAAGCACCCACAGTACACTCTTCAGTTGAATATTATGTCCTCCCATCAC
GAATTTTTCGAAAAAAACTGCCGTGAATTGGCGCATGCGCAAATGTAAGT
GTCGCGCTGTAATTAGCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004659-exon-sc0000047-1575043694:88850..89197 | TCONS_00004659-exon-sc0000047-1575043694:88850..89197 | Clytia hemisphaerica | exon |
| TCONS_00004659-exon-sc0000047-1575043694:86829..87605 | TCONS_00004659-exon-sc0000047-1575043694:86829..87605 | Clytia hemisphaerica | exon |
| TCONS_00004659-exon-sc0000047-1510915933:88850..89197 | TCONS_00004659-exon-sc0000047-1510915933:88850..89197 | Clytia hemisphaerica | exon |
| TCONS_00004659-exon-sc0000047-1510915933:86829..87605 | TCONS_00004659-exon-sc0000047-1510915933:86829..87605 | Clytia hemisphaerica | exon |
| TCONS_00004659-exon-sc0000047-1491911889:88850..89197 | TCONS_00004659-exon-sc0000047-1491911889:88850..89197 | Clytia hemisphaerica | exon |
| TCONS_00004659-exon-sc0000047-1491911889:86829..87605 | TCONS_00004659-exon-sc0000047-1491911889:86829..87605 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000047 | supercontig | sc0000047:86829..89197 - |
Blast
The following BLAST results are available for this feature:
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