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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004642 ID=TCONS_00004642|Name=TCONS_00004642|organism=Clytia hemisphaerica|type=transcript|length=1940bp
TTAGCAACTaatcacaaaaaatgctttataAGTGGAGAAAGACATGGGAG
GAAAAGTACATTATAAAATTTTCACCATTTATAATTGTGACACCGAAGCA
AAGAAACATAATTTTGAATCATGGAATCTTTGGCAGCTcttctgtttgtt
ttttgttatcTACCTTTTAATGATGCGATCCCAGCCCGCATGCTTTCACT
ACGGTTCGCCAGTGCATCATTTAGTGGAGCACCAGCATCCAACATCGAAG
GATCCATGAGACGTGCCGAATATGCTGGCTTCaccaaatccaaaaagaaa
attgacatTACAGAATTCAAAAATGATTCAAAGGTTGTTGGGCACAAAGA
AAAAAGCGAAACGAATTATGAACAGAGAGTTCCATGTTGGAAGGTGACAG
CTATGGCACGAAAGATGCATGCAGTGGCACCACGATATGTTGGCCGGAAC
ACATTAGATAACGTAGCTTATGCAGCATATAAACAAGTCGGACCGATGAC
AACGAAAAATGATCAATGCAAATTAGGCCTTAACTTTCGAATGGAAGAAA
AGAAAGATTGTAGCCAAAGTAGTGGGAAATGTGATCAAGTGAAATCGCAT
AATATTTATCTAGAAACAGATGATGGAgaatgaaattcttttgttatttt
tattgattctttcatttttatcaaatttaataatttaCTTTTATAATTCA
ATGTATTGTAAATTAATTGCTAATGAAGTACCCGGAAGGTTAAGATATTC
TTCACAAGTTACAAAATTGGTCTCTGACAGATAACAGAGCTTTGCATTTC
CTATCCTCCGGATACCACGCCTAAATGTCACGTGTCTTTAAATAAGTTAC
CTATGTGTACAGTATATCAAATCCTAAAATTGGTTTAAATAATCttacaa
aatactaaaaaaaattatgtgcCCTTCTCAAAATGTTAATATTATCCCTA
CAAATCCATGtaaaaagtttgtaaaatgctaaaaaaaattaaaatgaaac
taGTATAACCTTTTAATCTAAAGGCATGTTAAATGTAGATTTGaaatacc
cctgtatcagtgactCGTTAAGATCCGCCACAGcggatacacgctttttt
taaataagaatatactttataagaatattcatgatgaaattggccaaaaa
tttaagaatatgcttagaatatcaccatcatggaatttggcaactgaagc
taagaatgccactTTTAggatattttaggatgattttccgcaaaaagtta
agaatgtacccatcatgaaatgaaaaaaaaacgtcattcttataaaaaaa
gcgtgtagacgGTGAAAGAATTACTAAAATGACCCAATTCTAGCCCCGTT
TGAATATGATTAACCAAGTCAAAATTTCATCGGGTCACTTTAACGGggat
tgttttgaataaattgCACTNTTAAATATGATTAACCCAGTCAAAAATTT
CATCGGGTCACTTTAACGGGggattgttttgaataaattgCGTTAAAAGG
AGAATTGTACCAAATAATTAAATAAGCTTATAAATGATAAAGGTTTGATT
TTCGAATacctttttgaaatatttagcgAAACTGGAATCATACTTAATTG
CATCACAAAATCTTGATGGCTTCTGTGAAGGATTGTTGACTTTGTGACCG
TTATCCAAATCCAAGATATCAATTAAACGACATCCAGCCTCTTGCCGTGA
ATAACAAATACTGTTCTCTAAGATGATGTAACTTGTGCCGTGGCGACGTA
AAATTTTATGCACGTCTTTTGGTTCTTGACGTGCGTAAATTTGATATACC
TCTCGAGTTCGTTCCCTTAAGAATTTGTTCTCGTAATGCGGATGATTAGT
GATTGGTCGGTCCGTGCAAAGTTTGACACCTGCCATCAGTTGCATGCTAC
CGGTGAACGCGGCGTCCGTTGGTGTTTCTTTCCTGAAAAG Run BLAST on NCBI protein sequence of TCONS_00004642-protein >TCONS_00004642-protein ID=TCONS_00004642-protein|Name=TCONS_00004642-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MESLAALLFVFCYLPFNDAIPARMLSLRFASASFSGAPASNIEGSMRRAE
YAGFTKSKKKIDITEFKNDSKVVGHKEKSETNYEQRVPCWKVTAMARKMH
AVAPRYVGRNTLDNVAYAAYKQVGPMTTKNDQCKLGLNFRMEEKKDCSQS
SGKCDQVKSHNIYLETDDGE Run BLAST on NCBI transcript from alignment at sc0000047:614539..625309+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004642 ID=TCONS_00004642|Name=TCONS_00004642|organism=Clytia hemisphaerica|type=transcript|length=10771bp|location=Sequence derived from alignment at sc0000047:614539..625309+ (Clytia hemisphaerica)
TTAGCAACTaatcacaaaaaatgctttataAGTGGAGAAAGACATGGGAG
GAAAAGTACATTATAAAATTTTCACCATTTATAATTGTGACACCGAAGCA
AAGAAACATAATTTTGAATCATGGAATCTTTGGCAGCTcttctgtttgtt
ttttgttatcTACCTTTTAATGGTGAGTAAAGCGAAgttgcacgtttttt
tttttattagaacacctaaaatttggctgagcctggatgtgcttattttt
ttagcaattttcagcctaaaatgttcttaaatgcgttcttaNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTAGTTGGCTAAAAACCACATTTGCTTTTTTTCATGGATGCAGCATGAA
TCACAATATGATTTTACCAAAGATGAAATTCTAGTCTTAATTAACAGTCT
ATAATAGTTCATAAAATAATCACTCTCAATCATCTGTTGTTTTGCCCCCA
CTTTGAACACCTGAAAATTCTTAAAGCTGTTCAATATGATCTTTTAAAAT
GGACCTCGAATCTTTCTAATAGATGCGATCCCAGCCCGCATGCTTTCACT
ACGGTTCGCCAGTGCATCATTTAGTGGAGCACCAGCATCCAACATCGAAG
GATCCATGAGACGTGCCGAATATGCTGGCTTCaccaaatccaaaaagaaa
attgacatTACAGAATTCAAAAATGATTCAAAGGTTGTTGGGCACAAAGA
AAAAAGCGAAACGAATTATGAACAGGTTTGATGTTTAAATTCTAGTTTCT
TAACTCTAGCCTCGAGTCTAACACGAGAGTCTGTCGTTTCTTTCTGCACA
TTCTCTTACCCTAAAGATTTTACAGTGAAGGAtctttaattcgaactttt
ataacttgaatgtctccttaactcgaataaattttCTCTTCAGAGTTAAC
AATGTCTCGAAATTTCCATAGCTAAAACAAATTTGTATTCCATGTGTGTA
TTTGAATTATGGACACTCAAGTGCATCATTTGATCCTACTCTATAAAAAT
TCGTCTAAGAAATATCTAAATTAGCGCCATTGTAAACACAACCTTTGATT
TTAGAGAGTTCCATGTTGGAAGGTGACAGCTATGGCACGAAAGATGCATG
CAGTGGCACCACGATATGTTGGCCGGAACACATTAGATAACGTAGCTTAT
GCAGCATATAAACAAGTCGGACCGATGACAACGAAAAATGATCAATGCAA
ATTAGGCCTTAACTTTCGAATGGAAGAAAAGAAAGATTGTAGCCAAAGTA
GTGGGAAATGTGATCAAGTGAAATCGCATAATATTTATCTAGAAACAGAT
GATGGAgaatgaaattcttttgttatttttattgattctttcatttttat
caaatttaataatttaCTTTTATAATTCAATGTATTGTAAATTAATTGCT
AATGAAGTACCCGGAAGGTTAAGATATTCTTCACAAGTTACAAAATTGGT
CTCTGACAGATAACAGAGCTTTGCATTTCCTATCCTCCGGATACCACGCC
TAAATGTCACGTGTCTTTAAATAAGTTACCTATGTGTACAGTATATCAAA
TCCTAAAATTGGTTTAAATAATCttacaaaatactaaaaaaaattatgtg
cCCTTCTCAAAATGTTAATATTATCCCTACAAATCCATGtaaaaagtttg
taaaatgctaaaaaaaattaaaatgaaactaGTATAACCTTTTAATCTAA
AGGCATGTTAAATGTAGATTTGaaatacccctgtatcagtgactCGTTAA
GATCCGCCACAGcggatacacgctttttttaaataagaatatactttata
agaatattcatgatgaaattggccaaaaatttaagaatatgcttagaata
tcaccatcatggaatttggcaactgaagctaagaatgccactTTTAggat
attttaggatgattttccgcaaaaagttaagaatgtacccatcatgaaat
gaaaaaaaaacgtcattcttataaaaaaagcgtgtagacgGTGAAAGAAT
TACTAAAATGACCCAATTCTAGCCCCGTTTGAATATGATTAACCAAGTCA
AAATTTCATCGGGTCACTTTAACGGggattgttttgaataaattgCACTN
TTAAATATGATTAACCCAGTCAAAAATTTCATCGGGTCACTTTAACGGGg
gattgttttgaataaattgCGTTAAAAGGAGAATTGTACCAAATAATTAA
ATAAGCTTATAAATGATAAAGGTTTGATTTTCGAATacctttttgaaata
tttagcgAAACTGGAATCATACTTAATTGCATCACAAAATCTTGATGGCT
TCTGTGAAGGATTGTTGACTTTGTGACCGTTATCCAAATCCAAGATATCA
ATTAAACGACATCCAGCCTCTTGCCGTGAATAACAAATACTGTTCTCTAA
GATGATGTAACTTGTGCCGTGGCGACGTAAAATTTTATGCACGTCTTTTG
GTTCTTGACGTGCGTAAATTTGATATACCTGAAGGATTGAGagatgaaaa
acaaaaatatccatgacatataccgggtgcaccaaaaaaaaagtatacag
gttgaGATATtatgagcttcaggatttaaattttttgttcaatctttttt
tattgtatagaggatgctctaacttgaatctTGAGCTATCATAcgttaag
tttgaaaaagtggttcaaaagttatttccaaaaaaatgactttttttcca
tgtcaaaatttcaaaaaattattaaaaacagcaatcacgctatgaATAAC
CTGGAATTacacaaaatgacaaaaacacaatttcattgtttttttattca
tttttcccTTATCTTaaattttgccaacagtttgtccatcttatttggac
gtcatgaacatttccaacatcagcaaactcaatgcagacccaagttcttt
taGCTGctagtcgaggaatggtgatctatttttttcaaaatttttctcac
atagcacacacataacatcaaaacctctcttggagatttccaaaaaaatc
tttcagcctttccaaaaatattatcccacgTGGGANaaaacctctcttgg
agatttccaaaaaaatctttcaacctttcaaaaaatattatcccacgtgg
gaatagcttgttttaccatattcttaaattctgcaacaagttttgatgaa
cacaattgcatttttttggtattttaatgtgtaaagaaggtaactgtcaa
gagaaaagttgactcgctgtttttaatgatttttctctatacaataaaaa
aaagaacgaacaaaaatttatatcctgaagctcacaatatctcgacaaag
ttgtatacttttttttggttcaCCCGGTACTATAGGACCCAAAAAAGACC
GGGTGTTTGCcacttattttgaatttaaaaggcAACAGAACTAGTGACAA
ACGCCCAGGGCTACTTTGGATGATTCCGTATTTACATCGTGAACATCATC
GGATACTTCAACTTAATAGTAGAAATTTTGcaattaacaaaaaatgaatt
tagtaAACCACTAACGAGCAGCGCTTCATGCTTCGTACAAATTTATGGAA
GCATTGAACGTCATTTAGGGTCATAAGCATAAATAGTCTGCAGCAAGTTT
TAAACTAAAATCTATACCATTTAAAGGTTCTTTGAATACTCTCGGATACC
TAATAGCCggagggttggaataagcagggggggtggGTGGGTTGGAAAAA
ACCTCAAACCCCCCGGGGGGGAGGTTTgcaataaaaatgtcctgggtgga
aaatttttgaaaaggaggctaatacagcagaattaggacaacagagggaa
ctttcaaaaatattttccgtaaaattaataagcgggggaggggggttgga
ataagaatgtcctcgGTGGAAAGTTTTCGacaaattaattagcgggggcg
gctattaggtacccgagagtagaacCAGTTTCGCAAATAAGAAAGGTATT
TAATTTAAGCCAGATATATATTATTTCTAACGTGCAATGGTTCCACTTTA
TCTTAAAAGAAATGCAAATTTTGTATAAGAACAGTTTTCTCGGgaattga
agaaattttcatttatggAAGAAGTAAAAGTAGTGTGTTAACTACAAGAA
GGTCATAACGAATGTAATGGAATGAGGCTGAGAAGATAACATTTCTATTG
CGAATTTCTTCCAGAAGAGTAAATATTGAACGCTGAATATTTGCAACTTT
TTTGATACAGTTGCCAAAATAATTGAACTGCTATTACACCCTGTATTTGA
CCAGCTCTGCGAGTTCTTTTAGATCCCAGACTTCTCAGCGTAAAATCATA
CGTAGGGTGTCCAGAAAAAGTCACATATTTATaacataacaaaagaaaat
tcatttaGAGACTAGTCCCCAGCTCTTCAAGTGACTGTAACACCTCGCAT
ATATGCATATTACGTCATTGATATCATATATCATACGATGTagcaaaaca
atagaaaattaaataaagatgTTTGAGGCGTTTCAAATTTCGAGTATAAA
AGGATAGTCGGTGTGTGTAAAATCTTCAATCATCAAGATTCGTacgaaac
tgaaaaaaacatCAACATGTTACGTTTCACATTTCTTTTCGCTTGTCTTT
TGGGAATTACCCTCGGAGGAGGTGGTCTTTTTCCAATGACAGAGGAAGAG
ATTGAAAAATGTATGCCTCTTCAAAACGGAATGGATATCGCTGTCGAACA
ATTGAACATGAAGAATGATAGGAAAGAAAATGATTACAGGTTTGTTGTAA
CTTATAATATATATCTACacgggctctgaccatagtccaaaaattgattt
tggtatttgaacataaaagttatatttcagcatggaggtataaagaaaca
ggagaagtatgctattgtaaccatgctcgccctacgattgaAAATATTAC
GAGGTAtacatgctcataatctcatatatcgtgcatttttaatgagctct
tttgttgataggtaaaatcttattggctaacttaagtgttggattNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgggcgagcctagaat
ttcttttgatttattacataaaagaaatcaaaagactttaacgaccaatt
accgacaaattcatctcctgtctttctttaaaCCTCTATGATTttaggtt
ccttaacacttttaacaaagaattgcatttataaattgcattttaattga
atcccttaagagtaattaagaatttaattgcaaaaatgacgttatgaact
ttaaaaagatgttaataatatgttccATCACCCTCACtctctttttgttt
caaaatttctttacactgtccgcaaagaattgaactattttaaattttgc
ggaaaatttttctaaaaagatgtgtcaaaagttgtgactgtttttttaag
caaaatccagataaaaaattgatgaaaaatcactttgaagatttcgagac
aaagaagcatttacaaaaattttccgcaaaaaattttatcgttcggtaaa
agatacaccatctactgcgaaaattttttcaaaatgttttttcttcgcca
aaactaagctcttcaaagttgaaatactcttcctcacaagtcttcatttt
cttcttcatcaaattttttcaatgcaatttttgaattttcagatttagga
atagtttgtctaacagaaaatgtataacattccatagttttgttggttac
atcagtcagaaaacacattttaaacacggcaattatgaaaaattcactat
ggtcagagcccttaagtagaCAAGCATTGAACGGCCTTAAAATTAACACG
CAAGAAATTAACATGATTTTTTTCCTCTTCTCAAAGACATCAAGGATGAT
TTTTTAATGGAAGGAGCTCATATTTCCATTTCCATTGATTACCTACTTAT
ATTCGTGTGATAGGGTAATTCCACCTTTTACCATATACACTAGCCAGTTT
ATTTTTCTGCGACGGAACGGTTTGGCGTTGTTTCGACCTTTTCTAATGTT
AAATGTCAGTTGCTCTTTATTCAAATTTCCCGTTCTCCACTCCAGATTGG
TTAGAACCGAAACAATCAAAGCATCCAAGCAAGTCGTTACTGGAGTGTTA
TACCGTGTACACGTCACCATGGAAGAAAGTGTTTGCCAAAACGTCGAAGG
AAACAAATACAAAGGATTGACTGACTGCCCAACCAAAGGGAATGGACAAA
ACAAAGATTGCGTCTTCACGATCTGGTCTCGACCGTGGATGAAGAAATTT
GGTAAAGATTTATTGATCAAAGGAATCAACTGCAACTAAAATGTTTCctt
gatttatttttcaaaattactatCTAGTTTGTTGGCGATAAAGAATAAAA
CTATATTCATTCAGTTCAAATTCGTTTGTTTTATAATCATTTGAAAGATG
GGTACTTCTGTGCACTATCacacgattttttttataaaaatgatgcaaat
ccatttcatcatggatattcttaactttttttgggaaaatcatccaaaaa
tattcttacagcattcttaggttaggatcctgattcagactagatttaac
atttatggcatttttgtgaaaggagtgagccttacttgggggtaattgac
aatttataatggaaaatgctctaaaaatggcattctcaGCTTGAGAAGCA
GTAGTCTTTCAAATCCGGTGCACAAAtcctttaaaagaacaaacagtatg
gcttcgatggccaagaTATTAAGAGCAAATTTAGAACATTTGAACACTTT
GCGGATTTTAAAACACCTGGATATCTTGGGAAAATATTCTCGTTTCATGT
CAGGTACGTTATTTCATATCAGGCAGATACTCTCCTGTTACTTTGTTGCT
TTAATTCTGTGCTGATATAACAAACACGATTTTCTTTCCTACATCTAACG
AATTGCTGCACAAAAGTGTCAATTAAATATAAAAAGGGCTTTTAATCTCA
AATTTGTGTGTTTAAAAAAAACCATAACAATACTTTATAaaagcaaaacc
tttaaagaatgCAAGCCCTAATTCGAAGGCCATCCTAATTACGGAACATC
CTATTCATGGTTTCACGACAAACTAAATAGGGCGTAAAATACCACCGAAA
ATTGTTAAACCAACAACGCCAAAAAGTGAAATACTGTGTATCTCAGCTAA
TAAAGAAAATCCGTAAAAGATTCTTGCGATCCTACCACCACTTACTCATT
ATTTTCACGACCGTAAAGTTTtaaacggaagcacccaaaataaACCGAGG
CGTCTACCACTAGTTTGGTTGTTTGAATTTAAAATTAGTGGGAGACACCC
CGGtctttttttgggtgcttccgtataaaacattacgtcatgaatatcaa
gaactTCACACGTTTTAGTGAATGAAGTTAAAAagattactctcgggtac
ctaataaccggggggccgctaattaatttttcgaaaattttccacccagg
acattcttattccaacccccccccccccccccctttttttcccccccccc
cccccccgcttattgatttttgaccATTTGACTTCCTATTATTCAGTATT
ATTCAAAGCCACCGTCAGCAAGAAATGACAATTTACAATTCGATAGGCTT
TCGAAAATCCAATTCtcattgaaaatcaaattagagaggATCAACTGTTA
TTGAGATTTGAAGAAACTGATTAATGTAGACTGGAGTCTTTtttaatgcg
tgtaatacagtagtgagtctgctaaattgcgtgggttgcgtgggtgcgtg
ggtcaatatttttgcgtgggttaatatttttgcgtgggtcatttttttgc
gtgggtgcgtgggtcaatatttttgcgtgggttaatatttttgcgtgggt
catttttttgcgtgggtgcgtgggtcaaaatattttttgcgtgggtcaaa
ttttttgcgtgggtcattttttttgcgtgggtcattattttttgcgtggg
tcatattttgtgcgtgggtcatatttttttgcgtgggtcattattttttg
cgtgggtcaaagttTTTGAGTGGGTCAgtatttttttggtgattttttag
ctaactcgattANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAACCCAAAAGATTAAAGCGTGCTATAAGAAGCTTTAAAGCTT
CTAAAAATATTCTATAAAGCTtcctcttataaaaagacagctacagctat
gcaaaataaacgaaataaaccaaaacgtgttatgtaaaacacatccaaca
ttttggatatgaccagttcgaatttcaagggaaggcattttttcgaatta
cagggagaattttgacccacgcaaaaattttgacccacgcaaaaaataat
gacccacgcacaaaatatgacccacgcaaaagttttgacccacgcaaaaa
atttgacccacgcaaaaaatatgacccacgcaaaaaatttgacccacgca
aaatttttgacccacgcaaaaaatattttgacccacgNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNaaaaatattttgacccacgcacccacgca
aaaaaatgacccacgcaaaaatatcgacccacgcacccacgcacccacgc
aacccacgcaatttagcagactctacagtagtataggcgttatatgataa
tgaGATTATTGTTaggggatttagtttgtataactaaaattgttttctcc
attactttttgctttatttctaccatgtctgaattagtcgtctacaGTAG
TTTGCTAGACTAGGATTAAATAAAACATACCTCTCGAGTTCGTTCCCTTA
AGAATTTGTTCTCGTAATGCGGATGATTAGTGATTGGTCGGTCCGTGCAA
AGTTTGACACCTGCCATCAGTTGCATGCTACCGGTGAACGCGGCGTCCGT
TGGTGTTTCTTTCCTGAAAAG Coding sequence (CDS) from alignment at sc0000047:614539..625309+ >TCONS_00004642 ID=TCONS_00004642|Name=TCONS_00004642|organism=Clytia hemisphaerica|type=CDS|length=1539bp|location=Sequence derived from alignment at sc0000047:614539..625309+ (Clytia hemisphaerica)
ATGGAATCTTTGGCAGCTcttctgtttgttttttgttatcTACCTTTTAA
TGATGCGATCCCAGCCCGCATGCTTTCACTACGGTTCGCCAGTGCATCAT
TTAGTGGAGCACCAGCATCCAACATCGAAGGATCCATGAGACGTGCCGAA
TATGCTGGCTTCaccaaatccaaaaagaaaattgacatTACAGAATTCAA
AAATGATTCAAAGGTTGTTGGGCACAAAGAAAAAAGCGAAACGAATTATG
AACAGAGAGTTCCATGTTGGAAGGTGACAGCTATGGCACGAAAGATGCAT
GCAGTGGCACCACGATATGTTGGCCGGAACACATTAGATAACGTAGCTTA
TGCAGCATATAAACAAGTCGGACCGATGACAACGAAAAATGATCAATGCA
AATTAGGCCTTAACTTTCGAATGGAAGAAAAGAAAGATTGTAGCCAAAGT
AGTGGGAAATGTGATCAAGTGAAATCGCATAATATTTATCTAGAAACAGA
TGATGGAgaatgaATGGAATCTTTGGCAGCTcttctgtttgttttttgtt
atcTACCTTTTAATGATGCGATCCCAGCCCGCATGCTTTCACTACGGTTC
GCCAGTGCATCATTTAGTGGAGCACCAGCATCCAACATCGAAGGATCCAT
GAGACGTGCCGAATATGCTGGCTTCaccaaatccaaaaagaaaattgaca
tTACAGAATTCAAAAATGATTCAAAGGTTGTTGGGCACAAAGAAAAAAGC
GAAACGAATTATGAACAGAGAGTTCCATGTTGGAAGGTGACAGCTATGGC
ACGAAAGATGCATGCAGTGGCACCACGATATGTTGGCCGGAACACATTAG
ATAACGTAGCTTATGCAGCATATAAACAAGTCGGACCGATGACAACGAAA
AATGATCAATGCAAATTAGGCCTTAACTTTCGAATGGAAGAAAAGAAAGA
TTGTAGCCAAAGTAGTGGGAAATGTGATCAAGTGAAATCGCATAATATTT
ATCTAGAAACAGATGATGGAgaatgaATGGAATCTTTGGCAGCTcttctg
tttgttttttgttatcTACCTTTTAATGATGCGATCCCAGCCCGCATGCT
TTCACTACGGTTCGCCAGTGCATCATTTAGTGGAGCACCAGCATCCAACA
TCGAAGGATCCATGAGACGTGCCGAATATGCTGGCTTCaccaaatccaaa
aagaaaattgacatTACAGAATTCAAAAATGATTCAAAGGTTGTTGGGCA
CAAAGAAAAAAGCGAAACGAATTATGAACAGAGAGTTCCATGTTGGAAGG
TGACAGCTATGGCACGAAAGATGCATGCAGTGGCACCACGATATGTTGGC
CGGAACACATTAGATAACGTAGCTTATGCAGCATATAAACAAGTCGGACC
GATGACAACGAAAAATGATCAATGCAAATTAGGCCTTAACTTTCGAATGG
AAGAAAAGAAAGATTGTAGCCAAAGTAGTGGGAAATGTGATCAAGTGAAA
TCGCATAATATTTATCTAGAAACAGATGATGGAgaatga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004642-exon-sc0000047-1491911889:614539..614710 | TCONS_00004642-exon-sc0000047-1491911889:614539..614710 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1510915933:614539..614710 | TCONS_00004642-exon-sc0000047-1510915933:614539..614710 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1575043694:614539..614710 | TCONS_00004642-exon-sc0000047-1575043694:614539..614710 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1491911889:615711..615913 | TCONS_00004642-exon-sc0000047-1491911889:615711..615913 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1510915933:615711..615913 | TCONS_00004642-exon-sc0000047-1510915933:615711..615913 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1575043694:615711..615913 | TCONS_00004642-exon-sc0000047-1575043694:615711..615913 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1491911889:616243..617662 | TCONS_00004642-exon-sc0000047-1491911889:616243..617662 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1510915933:616243..617662 | TCONS_00004642-exon-sc0000047-1510915933:616243..617662 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1575043694:616243..617662 | TCONS_00004642-exon-sc0000047-1575043694:616243..617662 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1491911889:625165..625309 | TCONS_00004642-exon-sc0000047-1491911889:625165..625309 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1510915933:625165..625309 | TCONS_00004642-exon-sc0000047-1510915933:625165..625309 | Clytia hemisphaerica | exon |
| TCONS_00004642-exon-sc0000047-1575043694:625165..625309 | TCONS_00004642-exon-sc0000047-1575043694:625165..625309 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000047 | supercontig | sc0000047:614539..625309 + |
Blast
BLAST of TCONS_00004642 vs. Swiss-Prot (Human)
Match: D19L3 (Probable C-mannosyltransferase DPY19L3 OS=Homo sapiens GN=DPY19L3 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 5.051e-38 Identity = 80/143 (55.94%), Postives = 102/143 (71.33%), Query Frame = -1
Query: 1527 TPTDAAFTGSMQLMAGVKLCTDRPITNHPHYENKFLRERTREVYQIYARQEPKDVHKILRRHGTSYIILENSICYS-RQEAGCRLIDILDLDNGHKV-----NNPSQKPS---RFCDAIKYD-SSFAKYFKKVFENQTFIIYK 1925
TP A F GSMQL+AGVKLCT R +TNHPHYE+ LRERTR VYQIYA++ P++VH +LR GT Y+ILE+SICY R GCRL D+LD+ NGH + N+P KP+ RFC+ IK + + YF +VF+N+TF +YK
Sbjct: 569 TPRKAVFAGSMQLLAGVKLCTGRTLTNHPHYEDSSLRERTRAVYQIYAKRAPEEVHALLRSFGTDYVILEDSICYERRHRRGCRLRDLLDIANGHMMDGPGENDPDLKPADHPRFCEEIKRNLPPYVAYFTRVFQNKTFHVYK 711
The following BLAST results are available for this feature:
|
