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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004625 ID=TCONS_00004625|Name=TCONS_00004625|organism=Clytia hemisphaerica|type=transcript|length=615bp
ATTTTTTTATCAAGgtAAAAGTTGGTGATGGAAAATACATCCATGTCAGG
GTATTCCGTCCATTACCACACACCAATGGTAGCCCTGAAGTACATTCTGT
ACAAATGGATAAAAGTGAACAGGATGCTATTGTTCATTTTTGAAGAAGTG
cacaaaaaatagaaattatttCTAATGGGAATGTCTTAGGATAAAGTGtg
gttttttttaatgataatttttttttctaaattataCTGAAATGTATATA
GTCAAATTTCTAGCTCAACAATATTTTGCATTCACCAATTTTATTTTTCC
GGTAATAACATTGGAAACAATATCTAACTAAACAATATAACTAGAAACTG
TCATAGGTTTCACTTTCTTACGGaggttattttttgtttactatgTGTCT
ACAACCAAGTCTTGCTTCTAAACATTTTCAAGttacaattattttttatt
ataatataattttcacagtcatgaaataatttcttaaagaaaaagaatga
ggaattaaaaataatatctaaaaatggaaaatgatTATTTCATTATAAAA
ATGTATATATGATTTTGGGGATCATTTTATTCGTTTGAATCTGTTTATTC
GACAAAATGTTTGAG Run BLAST on NCBI transcript from alignment at sc0000047:379906..381125+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004625 ID=TCONS_00004625|Name=TCONS_00004625|organism=Clytia hemisphaerica|type=transcript|length=1220bp|location=Sequence derived from alignment at sc0000047:379906..381125+ (Clytia hemisphaerica)
ATTTTTTTATCAAGGTATATTTTTCAACGAAAAGGCTCAGTATACtttaa
ggcaaaaataaaaaaatatcctGTTTCCATAAATCGACCcgttgaacttt
ttttcgagAGTCATCCGgccgcaaaaaaaaaattttttttataagcaacg
tgattttttagataatctaaagATTAGTTTTTATATTActaaatagtaaa
aaaaaataaccTGCTTATTTGAAGGTTCAAACCTGGTTGCTTATGAAATG
TGTATTTTTTGATTGTATATTTTACGctgtattatttttgttttttgaaa
ctATAAAAACAATCTATAATTTCTACAAAGAAAATCAAGGAACAAAGCTA
AACACACTTACAAGTTTTGTATTtctgtttaaaaagaaaaaaatcaagac
tgtaagaaaaatttcaaaatgtaaaaaacaaattatacgGCCGGCcggct
gattttttttcatcagcTACATTTCCGGAAACTTTTGGCCTAACTTTTGC
TTTATCTGAGAATCTAAACTTAATCAAAATTTTCGTATTCAATGTTTTTA
GTTATTATTGTTTGGAgtaattttaaagatattacaTTCTCCAATTAtaa
tgctttctttttctttcaggtAAAAGTTGGTGATGGAAAATACATCCATG
TCAGGGTATTCCGTCCATTACCACACACCAATGGTAGCCCTGAAGTACAT
TCTGTACAAATGGATAAAAGTGAACAGGATGCTATTGTTCATTTTTGAAG
AAGTGcacaaaaaatagaaattatttCTAATGGGAATGTCTTAGGATAAA
GTGtggttttttttaatgataatttttttttctaaattataCTGAAATGT
ATATAGTCAAATTTCTAGCTCAACAATATTTTGCATTCACCAATTTTATT
TTTCCGGTAATAACATTGGAAACAATATCTAACTAAACAATATAACTAGA
AACTGTCATAGGTTTCACTTTCTTACGGaggttattttttgtttactatg
TGTCTACAACCAAGTCTTGCTTCTAAACATTTTCAAGttacaattatttt
ttattataatataattttcacagtcatgaaataatttcttaaagaaaaag
aatgaggaattaaaaataatatctaaaaatggaaaatgatTATTTCATTA
TAAAAATGTATATATGATTTTGGGGATCATTTTATTCGTTTGAATCTGTT
TATTCGACAAAATGTTTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004625-exon-sc0000047-1491911889:379906..379919 | TCONS_00004625-exon-sc0000047-1491911889:379906..379919 | Clytia hemisphaerica | exon |
| TCONS_00004625-exon-sc0000047-1510915933:379906..379919 | TCONS_00004625-exon-sc0000047-1510915933:379906..379919 | Clytia hemisphaerica | exon |
| TCONS_00004625-exon-sc0000047-1575043694:379906..379919 | TCONS_00004625-exon-sc0000047-1575043694:379906..379919 | Clytia hemisphaerica | exon |
| TCONS_00004625-exon-sc0000047-1491911889:380525..381125 | TCONS_00004625-exon-sc0000047-1491911889:380525..381125 | Clytia hemisphaerica | exon |
| TCONS_00004625-exon-sc0000047-1510915933:380525..381125 | TCONS_00004625-exon-sc0000047-1510915933:380525..381125 | Clytia hemisphaerica | exon |
| TCONS_00004625-exon-sc0000047-1575043694:380525..381125 | TCONS_00004625-exon-sc0000047-1575043694:380525..381125 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000047 | supercontig | sc0000047:379906..381125 + |
Blast
The following BLAST results are available for this feature:
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