TCONS_00004601 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004601
Unique NameTCONS_00004601
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004601 ID=TCONS_00004601|Name=TCONS_00004601|organism=Clytia hemisphaerica|type=transcript|length=317bp
TTATCTTAGTATGCTACTTAGATCACATGTCAATAATTTTTCCGGCAAGG
ACAATGTGAACTTCCTTAGGAAAAGGATCGATACAGTTTTAAATTATCGA
TTCCATCAATACAAACATAGGCCTATTGATAGACTTTTATCGATAAGATT
TTAACAATCCCAAGTTAACGATAGAAAATTAGTGATAGGAGCTTTATCCA
TGAAAATCAAAGTGTCCTGGCAGGTTATCATATGCCAATAATTTCTTTGA
CAAGGACCTATCTTGACTGTaacttccattctatttctaCCAGGTGTCTA
TCTATGATTCGTGGTTA
Run BLAST on NCBI

transcript from alignment at sc0000045:805111..805427

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004601 ID=TCONS_00004601|Name=TCONS_00004601|organism=Clytia hemisphaerica|type=transcript|length=317bp|location=Sequence derived from alignment at sc0000045:805111..805427 (Clytia hemisphaerica)
TAACCACGAATCATAGATAGACACCTGGtagaaatagaatggaagttACA
GTCAAGATAGGTCCTTGTCAAAGAAATTATTGGCATATGATAACCTGCCA
GGACACTTTGATTTTCATGGATAAAGCTCCTATCACTAATTTTCTATCGT
TAACTTGGGATTGTTAAAATCTTATCGATAAAAGTCTATCAATAGGCCTA
TGTTTGTATTGATGGAATCGATAATTTAAAACTGTATCGATCCTTTTCCT
AAGGAAGTTCACATTGTCCTTGCCGGAAAAATTATTGACATGTGATCTAA
GTAGCATACTAAGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002595XLOC_002595Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004601-exon-sc0000045-1491911889:805111..805427TCONS_00004601-exon-sc0000045-1491911889:805111..805427Clytia hemisphaericaexon
TCONS_00004601-exon-sc0000045-1510915933:805111..805427TCONS_00004601-exon-sc0000045-1510915933:805111..805427Clytia hemisphaericaexon
TCONS_00004601-exon-sc0000045-1575043694:805111..805427TCONS_00004601-exon-sc0000045-1575043694:805111..805427Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:805111..805427 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.320279	0.371875	0.363821	0	0	0	0.790628	0	0	0	0	0.873736	0.453692	0.745993	0.200141	0	0	0.698275	0	0.317553	1.85869	0	0	0	0	0.450354	0.48063	0.364541	0.742819
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004601 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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