TCONS_00004563 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004563
Unique NameTCONS_00004563
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1755

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004563 ID=TCONS_00004563|Name=TCONS_00004563|organism=Clytia hemisphaerica|type=transcript|length=1755bp
ACTGTATCGCAaattaattgtttttggagttttttttggaagaatagtgt
tttattttctaattcgaaACATGGTCGCAATGCTTGGATATAATTTTAAG
aCGCAGAACCCATCGTGGTCGTTCGACATTTCACCTCACGCTTCGAAACC
GCCTCACCTTTCACACTCGTCCGCGCTTCCAATGACACACGCAGACCCTt
tgaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacatc
aatAATAACCATCACCATCATCAACTCGATTCAGTGCCAGGTGAAACAGA
TTTGAACAGTGCTGTATCATCAGAAACGATGCCAGATTCCGAAGATTCCA
TTTTCAAAGATGACGAAGATGAGaaagacaaaagaaaacaaaagaaacga
gggatttttcccaaaatggcCACCAATATCATGAAAGCTTGGTTATTTCA
ACATTTAAATcaTCCATACCCCTCAGAAGAACAAAAACGTCAACTGGCAA
ATGAAACTGGTCTTACCATACTTCAAGTTAATAATTGGTTTATCAATGCA
AGGCGGCGTATCGTCCAACCCATGATCGATGCATCAAACCGGGCAGGTAA
ATCACCGGTTGTCACAGTATATAAATCACGTAAACGTAAAAATTCGGGAT
CGGACAGTATTTCACCAGGACCTTTTCCCTATCCACCAATGGGTGGCCAT
TATTCGGCGCCATATTTAAACGAACATTACTCTGGGATGTATTCACAATA
CCATAATGACATCACAGGAGCTTCAACGACTACACCGCATGCGCACTACA
GTCCAAGGTCGTACGGGTGTGGCGCATCTGATCAACATTCGATGGGTGTC
TCTCTACCTCCACAAACCAGCTGTGCTCCTATGAGACAGCATTCTTCATC
TTCTTATGGAACTTATAGGACCTCCCCGGTCCCTCCTACTCCACAGTCTC
CCTTCTTAGGGCACACACATCCTTCAATGATGCCACCGTCTACGAATACG
CCCAACCTTCATGGTTACCACCAGACACACCCAGCATCTTATCCGCCCCC
TCCGCCTCACCAATACACGCCCCACGAAGAACTCACGCCCCATACCGTTC
ATAGTGTTATGAATATGCATAATATATAACACTTGCCTCCCTTCTTTCTC
CCTTATTACGATATAAATAGTTTTcaccattaattttttctgtgtGTTGT
TTTTTATactattttttaagaaattttatgTTGCTGTTATATTAAATAAA
TCATAGTTCATTCTCCTTAGGGCCATGTAATGGTCTggagaattttttaa
aagaaattttaaccattttgttagataaaaaaaagttaaaagcggTCGTT
AATATATGTTTTctataatatttttaacctaacTTCGGAGAATCGGTGAT
GAATATCCTTAAATAACATATTTTCACATTTTAGGAAGCTATTTCTAATG
GATTCCTTTTGAAAATGCAATCGTTTGatgtattttgagttttttaaatt
ctaatttttcttaaaattccaGTTGCTTTTCTGTCTTAActttaaattaa
ttaaaaagtgcttaatatttattttatattatttcgcttgattttttaaa
gaaaatacttttttctgcttttagaaatttttgacCGTTTAATAATGGGC
TGTAAATAATGATGTAGCTTTGtcctttttgtaattttaccaTATTTTAA
TTAAAAGCAAGAACTTTAGTTCTTACCTTATTATatgagaaaatttgaaa
tagaa
Run BLAST on NCBI

transcript from alignment at sc0000045:648923..658213-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004563 ID=TCONS_00004563|Name=TCONS_00004563|organism=Clytia hemisphaerica|type=transcript|length=9291bp|location=Sequence derived from alignment at sc0000045:648923..658213- (Clytia hemisphaerica)
ACTGTATCGCAAATTAATTGTTTTTGGAGTTTTTTTTGGAAGAATAGTGT
TTTATTTTCTAATTCGAAACATGGTCGCAATGCTTGGATATAATTTTAAG
GTATTTATCATTTTTGCAATTTGAAATTTCGCTTCATGCTGGAAATTCCT
TAATCTTTCAAAATCAATATTGTTTTTTTTTTCAATAATACGCATCAGAA
CATCACCTAACATTTTATAATTCTGATATATTTCTTCCCTGCTAATCTAA
TGAAAATCCTCAGCGCTGCTACATCTTAGGTTCTGCAGTTTTCAAAATCT
TTTTTATCAAATTTCGTCATCGGTTGATTTAGTTGCAACATTTTGCCTTG
TTTTTTAATGGGGTGAAGAAATTACGAATGGTGGTTCTTAGGACTTTGGC
ATTGTTGATAAAAAAATGTGTTTTGTTTATTTGTTTCTTTTCTCGAGTAG
AACCGTAGGAAATTGTTAAGAAGAGGTTGAGTTTATTTTTCTAACGCATC
GAGTTCATCTCTACTTCACGAACTGCAGCAGTGTGGAATCATTTAATTTG
CCTTTCGTTACTTCGAGAGTGTGTAGCTGCAGTTAATAATTGACAATTTT
ACGATAGTAGTTTGTTGTAATCAAAAAAAACATTTTTGGAGTCTGAGGCT
TAATTTGTAAGTTGTTCTCTGTTATACTAAACTATGATATTTAAATGTGT
ACTTCTTCTGATTGGATTCAATTGACGTCATAACTCGGGTTTTTCATAAC
TCGGGTTTTCATAACTTGGGTTTTTTAACTCGGGTTTTCCAAGCCTCTTT
CAGTTCGGATTCAATTGATGTTGTGGTGCAATAATACAGATCTTGACAAA
TCCCAGCTACATTAAAGTAAAAGACCAGCACTGGCATTCCAGTCTACAAT
GTGCCGGATACCGATTCCATTGGAACCCTCAATACTTTCATATCTTAATC
TCAACCTTCTCAATCATCTTTCAATCTGTTCATCAATGGGTTTGTTACTC
TGCTTGGCTGGTTGGATTTGGCTTTAGGTTTGTTGAAGTTGCTTGTCGAA
TAAATGATTCTGAGGGACCGAAAGATATCTGCAACATCTTCACATGAAAA
TTTGTTTGCCTGTTTACTTACTAAAAAAAAGCTTGAATAGAAAGAGCCCT
TAAGAATTCCTTAATTCATCATCAACTTCTAATGTTTTNTGTTTTCCTGT
TTACTTACTAAAAAAAAGCTTGAATAGAAAGAGCCCTTAAGAATTCCTTA
ATTCATCATCAACTTCTAATGTTTTTTCCAAAACACTAATGACGTCATGC
TAAAGGGGCCTTTTCTCTATTATGAAAAACGTTAACCAAGTATGGTCAAT
AATTTTTCCTTGACTGGATAGGTAGTAAAATTGACTAAATCTAAACTGCA
ACAGTTTAAAAATTTCAATTTGACTCTTCGCTGATTCAATCGAAGTGGAA
CGGGGATCTAATGTTTTTGAATTAAAAAAAGATTCGAATATTAGAATAAA
GCATTTTAAGAGGGTTCCCTTTGGCGCGGAATGAGGATTAGTTTGAATTA
TAGAAATATTCAAATACTAGAAGTTCAAATTAGCAAGATTGTACTGCATT
CGTTGGTATGCTGCGTCTAGTTAATTCTAGGCCAATAAATGACTGTTTCC
TCAAGAAATGCAATACAAATCATTTTTCCAGCAATCTAGCAAGGAACCTT
GGCTTTTTTAAGGGTAAGAATGAGGGATAAGCTGACGAAAATAAGAATAC
AGTTAGAGTGCGAAAAGAAGGCCGTTATCCTTCTTTGTTGACAAAACAGG
AAACCATCTCTTTGTTCTTAACACCTTTCGTGTTACCTATATTTTTTTCT
CCTTTTTTTTGCGTTTATTTTGTTTGATACTTTGATCAGGTGCTTTTTCG
TGCCTTGACACGAGCTTTTCTGAGAATGATGATAGAACTTTCATATTTGA
TATTTGCTAAATGTTAGTCACCTGTGGAGTTTTCAATTACGTAAGGGTTT
GAGTTTTATTTTCCTTTTCTGATATAAAAATAATTTATAAAAACAATGAG
GCTCAAAAACGACCAAAAGTAAGAACAATTTTAGGGTCAAAGTAGTAAAT
ATTAGGAAATTTTAGGTATAGAGTACCTCACTTTTGTTTTAAAAACAAGA
ACAGGATAAGAACAATTTGAGGCTCAAGGTACAAGAAAAAAATAATCTTC
TGATTCCGCTCTGATAAAAAATTGGTTTATAACAAAAATTACCCAAATTA
TTTAAAGTGGTAAAGTTTTCGCCTCATTTAAGTCACTTAAAGCTAAGGCT
AAACAACACCTAAATTCTTCATTTTTTTATGAATCAAATTAATTGATTTT
TTATTGATTGGAAAAGACCTCGCGTGGAAAATAGCCCGTTTTCTTCCACA
AATATGAAAGAAGCTTAGTCAGCGGTATTGGTCTTGGTGTCCCAGCTCTC
GGAAATAGCCTCTCATGGAATTGTTGACTCTTCAACCGCAGCACTTCCTT
CACAAAGGCTTGCAAATACATGCATACAACAAAGCAAGTAAAAATTTGCG
GCTCAAGCACTTTGTCTTATATTATATCACAGTGGTGTGCGAAGTCTAAC
AGGTTGGACCATTATTTCATGATATTCACCTTTATCTGGTATCGTTATTT
TTCACCTATTTTCCTCAACTTTGAATGTCTTTCAGGCCTCCTCTTATATA
CCGTGAAGCTTCATTCAAAAAAGTTGGAGTTAGACTTAAATTCGCTTATT
TTTTGAGTTGTTATAAAAGCATTTTAAGACTCTCTCGTGAAAGAATTCAA
TTTGCTTGACCCTTGACCTAAGCTACTAAGCAACTATGGGATATCGTGCC
AAGAGGAATTTTATGACTCCTTTCTCAAAGACCACCCTATGCTTATAGAT
ACAATAAGTAGGAGAGAAATTTGTTCAATTTTAGAGGAAGGATCTGAAAA
ATTCGAATGAACCTTCAAGTCATTAAGTGATTTTATTGTTATTTTTGTCT
AAATATAGTTATTACCTGTTTCTAATCCGGATTCGAAATGAACCTCATCA
AAATGCAAATATCCCCAGTTACTCGAGGAAGTTTGCAACTTTTTATTGTT
ATTGATTTTGACTTTAAAAAACCGCAAAATTTGTTTAGGAAACGGGAGAA
ACGGGAAAGATATCTGTTCACATGCGAGAGTCATAGAAAGAAATGCCGTA
AAATAAGGGACTTTTTTCTTCCCTTTTCTGTTTCTCCCTTCAGCACCCCT
ATCTTCTCTAAAGGCCGGTAATTTTCTAAAACATTATGCGGTTTAAGGCA
TTGTTTCCACTTCAAAATAAAAGCAATTTTTTTGTTTTCTTATTAAACAT
ACTTGTATTATAGTTATAAAACTTTTAGGGTATCGCAGTCTTTCAAGAAA
CTTTTAACATTTACATTTTTTGTTTTATCCTTTGGGCATCAGGATATTGG
TTAAATGGTTTCATTGGGTTTTTAGGGAAGTAATTTGATTAATATAGCGT
TTGGTGATCTTGAATATTTATAAGGAGGAGCAAAAGAGATTTTTGTTTCA
TTCAATTGAAAGGGTTTGTTCGTGTTTTCCCACTCACAATAAAAGGTAAA
AAATTTCTTGACAGGTCCCATCAAACATAAGATCCCTTGGTATTATTTCA
AATGACAGAATTATGACAAAGTGGTTTTTGAACTTGATGGTTTAGACTGA
AAGTGCCTAGAAGCTGTTTTAACCATTGATTGGACTTATTTTTCTTAGAA
TTTAATGTTTCAGATTTAATTTCATAATCTTTTGGAATTTTTCCTGGTTC
CATTTTTTCTTGGCAAGGTTGAATTTTTTGAGAACTCTTCCTGAAGTATA
TAACAATATAATTAGGTACAATAGGCACAGAAGAAGGTTGAAATGAACTT
GTCTCAATGTAATTTAGGTATAAACCATCCCTGTATTTCGCTTAGTTCGC
CAGCTCTCATTAAGAAGACCGGTTGAAGTACAGTACCACTAGTTGCAATT
AAATCAACCGAAGTCGTTAGAAATCAAAAGTTCAATCACAACGACCCTAC
CATTGGTGGATATACTTAAAGAGCGTGTAAATATTGAATTACTTTTATTT
TATTCAGACGCAGAACCCATCGTGGTCGTTCGACATTTCACCTCACGCTT
CGAAACCGCCTCACCTTTCACACTCGTCCGCGCTTCCAATGACACACGCA
GACCCTTTGAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACATCAATAATAACCATCACCATCATCAACTCGATTCAGTGCCAGGTG
AAACAGGTAAATAGTTTTCTCTTTATTCACTTACATGAACTGAACCTTGA
GGAGTGGAGACCATCAAATGTGGTGGATCTCTGAAGTTTCAAAATTTATG
ACGAAGGGTGTTTCTTTTATCCATACTCCTTATAAGGAAATAACACTCTC
CCTCATAAAATCTGAAGCCTCCTTCGATCAGCAACTGTGATCTATAATGT
TTCCCGCCCGTCCACCTACGCCACAAAACGCCATAAGAACCGTTTCTAAC
CGTTTCTGTATATCGTCAATGGAATGTTTTTTGAACATTGAAGCTAGTCG
GCTCAAATCCACACTTTTTCGATATTCATTCAATCGATAATCAATCAATG
GACATCAGACGATTGTATGTAAATCACCTTAGGTAGGAATCTCGTTGGCA
CCTGCTTCAGTCTGATGGGGAAATTTAACATTAAAATAAAAGATGAGCTT
GGAGATTGATTCTCTGGTGGCGAAAGTGAGTAAACCATCGCACGCAGGTT
CATCTGTAGTTGTGCTCAGAACTAATTCAATTTGATCGTTGAGAATGAAT
AGTCTCCATTCACTAAACGAATGGCAACAGTCACGCGATGGGTGCGCTAA
AAATTATCAGCATGATCAGAGCTTCGAAATCAGAATGTATATTCATCAAT
TCAATTTGTTCTTTGTTAACAATCTAATAATCTATACTTATGATGGCCAA
AGACTACACGTTTTTTATAAAAACAAACTAAAGAACACGAGGCTTTGACA
GCAAAAATATTAAGAACAACTTGAAAATATGTTGAGGTTTTGCCAGGAGT
TTTGCGGAACCTTGAACACCCGATTTCTTAGGAAAATAGCCAATGTGGTA
AAAATATGAATATGTTAAGAAAATCTTTTGGCTTAAAACGCAAAAATCAA
AATCCGTAGGCTTTAAAAATTTTGGATGTTCTTAAAAAAATGTGTATTTG
AAGAACGGACCTATCCCAATCTAAGACCACACCCATGTTCAAAAAATGTT
TTCCTCCAGGAGTATTTATCGAAGATTTGTTTAGATGTGATAGCTGATAA
TAATTCATCATTCATTTATTTCGAAAGTTTTGACACTAATATCAAGTGAT
CACCTTGAGCTGCTTGATTGATTACAATCTATCCCTCTTTCTTTATTTTC
TAATCCATGAACAGGAGGATTTGGAATCCTATCAAATTAATATTTTTTTT
TACTTTTCCCGACATTAAGTAGTTTTGATCCGGCGACAACCTATTTTTTC
TTCTCCAGCCAAAGTTCATAATATCTGGAATGGGTTAATTTTTTACAATA
AAAGTGGACGCTGAAATTTGACCCAGTGAATTGATAAATATACAACAGTA
ATATGCGTTTTTTTTTTTATAAGTACGTCAAAAATTTTCGAAGCCTTCGG
ATGTTCTTAGTTTTTTAGATTTGAAGCCTAAAAATGTTCTTATAATGTTC
TTATTTTCAGCATTTTTTGAGCATTTTGATGTAATTTCTTAAGAAAATGC
ATGTTTTTAAGTCTCCAAAGCCTTAGAATGTTCTTAGGTTGTTCTTAAAT
TTTTGGGCCTCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAA
AAAACGTGTATGCTTCTAGCTATACCAGCCTTGTTAATCTAATATGATTA
CACCATTACACAATTTTAAGATATTAGATTACAATGGACAATCAATACCC
ATTTTCGATGAATTTGTAGGACAATAGAATTGTTCTCAAAGAGTGCTTAA
TTAAGCTCTTCATTTGATAGCGTGAAATTGTAACCTACTACAAGTCCCCG
TAATTGAATTTATAAGCCACACTTTCCTGTCACAGTTTCAAACAGATTCC
ATTTTAAATGATTGAAATGTCTACTAAAGACGGCGTGTGAATGAATGGAA
GGTTGGTTTTCTGTGGAAGTTTTTTAGAGGAAGAATTTTCTTTTGAAATT
TTGCTTGTGATGAAAGGCATTCAAGCGTGTGAAGTATTTCTTTCAAAAGT
GTCAAAAAGTTTATTCGTTTCTTGTCTTCAGGCTGTAAATGTTATCAGTT
TTTCAATCAAAATTTCTGTTTGGTTCAAATATGGTTCAATCAACATATTT
TTGGTTCAAGCAGTAATTTTTAGAAACTATTTTTGTAACAAGGTTTATGT
TATAGTTAGTGTAATAATTCGTAAACAAATGTTCTTCGCTATACAGCTGG
TGCGAAAATTTTCGAACATCCTGTCGTAAACTTGTCATATCGAAATTGCT
CGTAGCTATTCAAACAGTGTGAAAAGTGTCGAAATTTCATGTCGAAAATA
AACTTGTCTAGGGATTATCTGTCATTTGCTAATTATTTTTTTGGTAAATT
TTTTTAACATCTGTTTACGGTAAGTGGCATTTCTTGTCGTGAAAAACTGA
CAAATAAATTTTTTAGATGATACCAAAATAAAATTATTTTGTGAATTTCA
TTGATGGTTAGCTATATGGGCTCTTGGTTTTCTTGTAAATTTTGTAGAAG
AGTTTTTGGGTAGAAATCGCAAGTTTAACCATCATGGGAGAGAAAGATGT
TTATTGTATTGATAAAACTATGGCTGTACTGTATAACATTATAATGTCAT
TGATAGATTGCAGGTTTGTTAGCTTTGAAAATCGGAATGTGTCTTTTGTA
GATGTTCTAAAAGAAGTTGGCGTGAAAAATTACGGAGAATATACGTGAAT
GTATTTTTGGTCTAAAATGTGAAGTTACAGTGATGGTAAATAGCCAAGCC
TGGCTATTTCAAACGAAGATGTGTTGATGAGACCTCGACCAGTAATCACG
TGGTCAAATTTCGCCGTTAGATTTCTGTTGACCCTAAAATTGCACACTTT
TTATGAAAAAAATTCTATATGGAGATTGAGAAAAGTCACGATAAGAAAAT
TTATAAAATGTAACCCAAAGGAATTATTATCTTCGGTAATTAAAAAACGA
ATTTATTCTTCTTTCACCAGATTTGAACAGTGCTGTATCATCAGAAACGA
TGCCAGATTCCGAAGATTCCATTTTCAAAGATGACGAAGATGAGAAAGAC
AAAAGAAAACAAAAGAAACGAGGGATTTTTCCCAAAATGGCCACCAATAT
CATGAAAGCTTGGTTATTTCAACATTTAAATGTAAGCAGTATATTCAATA
TCTCATTTAGGCTTTGCGAAATTGAATACGATTGTAATTTTCAAAACCAC
TCTTGTTTGAGTTGATTCTACTCACATGTTACCTACTTAGGCTCATTAGT
TTGGACTCCCACAGTAATAATGTAATAACTAAATTGATGCCTAAGCAGAT
TATTCACGTTAAAGTGTTACCCCATCTATCAATGCATTCATGAACCTATC
TGCCGCATCTGTAACTGAAACTTTTATGAATATTTAACACTTCTTTTTTT
TCTAGCATCCATACCCCTCAGAAGAACAAAAACGTCAACTGGCAAATGAA
ACTGGTCTTACCATACTTCAAGTTAATAATTGGTATGTTTTCCAACAATC
TTTTAACAACCTGGCTATTCGTAAACGATAGACAGTATTCCGGTTCTAGA
AGGCTGCCCTGTCCGTAGACGTCAAATTTCATTTTTTTACCTTGCGCTGT
AATTTTACATAAAACTATTTGTTTTTTTTTTAGATTGACGATGTGCTCAA
GCGCTAAACATTGAATTTCAAAAATTTTCATCATCTGTTGAAACTATAGT
CCCCGATCAATACTTTTCTTTTCCCTTTTCAGAAAAGCTTATCATCGTCA
ATATTTTTTCATATTTCATGTAGGTTTATCAATGCAAGGCGGCGTATCGT
CCAACCCATGATCGATGCATCAAACCGGGCAGGTAAATCACCGGTTGTCA
CAGTATATAAATCACGTAAACGTAAAAATTCGGGATCGGACAGTATTTCA
CCAGGACCTTTTCCCTATCCACCAATGGGTGGCCATTATTCGGCGCCATA
TTTAAACGAACATTACTCTGGGATGTATTCACAATACCATAATGACATCA
CAGGAGCTTCAACGACTACACCGCATGCGCACTACAGTCCAAGGTCGTAC
GGGTGTGGCGCATCTGATCAACATTCGATGGGTGTCTCTCTACCTCCACA
AACCAGCTGTGCTCCTATGAGACAGCATTCTTCATCTTCTTATGGAACTT
ATAGGACCTCCCCGGTCCCTCCTACTCCACAGTCTCCCTTCTTAGGGCAC
ACACATCCTTCAATGATGCCACCGTCTACGAATACGCCCAACCTTCATGG
TTACCACCAGACACACCCAGCATCTTATCCGCCCCCTCCGCCTCACCAAT
ACACGCCCCACGAAGAACTCACGCCCCATACCGTTCATAGTGTTATGAAT
ATGCATAATATATAACACTTGCCTCCCTTCTTTCTCCCTTATTACGATAT
AAATAGTTTTCACCATTAATTTTTTCTGTGTGTTGTTTTTTATACTATTT
TTTAAGAAATTTTATGTTGCTGTTATATTAAATAAATCATAGTTCATTCT
CCTTAGGGCCATGTAATGGTCTGGAGAATTTTTTAAAAGAAATTTTAACC
ATTTTGTTAGATAAAAAAAAGTTAAAAGCGGTCGTTAATATATGTTTTCT
ATAATATTTTTAACCTAACTTCGGAGAATCGGTGATGAATATCCTTAAAT
AACATATTTTCACATTTTAGGAAGCTATTTCTAATGGATTCCTTTTGAAA
ATGCAATCGTTTGATGTATTTTGAGTTTTTTAAATTCTAATTTTTCTTAA
AATTCCAGTTGCTTTTCTGTCTTAACTTTAAATTAATTAAAAAGTGCTTA
ATATTTATTTTATATTATTTCGCTTGATTTTTTAAAGAAAATACTTTTTT
CTGCTTTTAGAAATTTTTGACCGTTTAATAATGGGCTGTAAATAATGATG
TAGCTTTGTCCTTTTTGTAATTTTACCATATTTTAATTAAAAGCAAGAAC
TTTAGTTCTTACCTTATTATATGAGAAAATTTGAAATAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002564XLOC_002564Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004563-exon-sc0000045-1575043694:658114..658213TCONS_00004563-exon-sc0000045-1575043694:658114..658213Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1575043694:653908..654106TCONS_00004563-exon-sc0000045-1575043694:653908..654106Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1575043694:650783..650943TCONS_00004563-exon-sc0000045-1575043694:650783..650943Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1575043694:650432..650508TCONS_00004563-exon-sc0000045-1575043694:650432..650508Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1575043694:648923..650140TCONS_00004563-exon-sc0000045-1575043694:648923..650140Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1510915933:658114..658213TCONS_00004563-exon-sc0000045-1510915933:658114..658213Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1510915933:653908..654106TCONS_00004563-exon-sc0000045-1510915933:653908..654106Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1510915933:650783..650943TCONS_00004563-exon-sc0000045-1510915933:650783..650943Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1510915933:650432..650508TCONS_00004563-exon-sc0000045-1510915933:650432..650508Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1510915933:648923..650140TCONS_00004563-exon-sc0000045-1510915933:648923..650140Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1491911889:658114..658213TCONS_00004563-exon-sc0000045-1491911889:658114..658213Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1491911889:653908..654106TCONS_00004563-exon-sc0000045-1491911889:653908..654106Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1491911889:650783..650943TCONS_00004563-exon-sc0000045-1491911889:650783..650943Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1491911889:650432..650508TCONS_00004563-exon-sc0000045-1491911889:650432..650508Clytia hemisphaericaexon
TCONS_00004563-exon-sc0000045-1491911889:648923..650140TCONS_00004563-exon-sc0000045-1491911889:648923..650140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:648923..658213 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	4.05778e-08	0	0	0	0	5.66901e-07	1.61587e-08	4.61054	4.17428	3.08935	1.19647	1.99035e-05	7.86032e-09	2.86817	0.442507	9.84032	5.12636	0	0	3.07985	6.01322	1.01603	1.60546	0.00337481	7.69172e-08	4.45069	6.57078	6.29284	4.63201
Blast
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BLAST of TCONS_00004563 vs. Swiss-Prot (Human)
Match: ME3L1 (Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1 PE=5 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.997e-35
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 2 
Query:  398 RGIFPKMATNIMKAWLFQHLNHPYPSEEQKRQLANETGLTILQVNNWFINARRRIVQPMIDASNRAGKSPVVT 616
            RGIFPK+ATNIM+AWLFQHL+HPYPSEEQK+QLA +TGLTILQVNNWFINARRRIVQPMID SNR G+    +
Sbjct:  165 RGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFS 237
The following BLAST results are available for this feature:
BLAST of TCONS_00004563 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ME3L11.997e-3580.82Putative homeobox protein Meis3-like 1 OS=Homo sap... [more]
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