TCONS_00004539 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004539
Unique NameTCONS_00004539
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1706

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004539 ID=TCONS_00004539|Name=TCONS_00004539|organism=Clytia hemisphaerica|type=transcript|length=1706bp
gaaaaaaattcatacccTTCATTATGTATGTaatgtaaattaaaaaaaac
acacaaaacgAACTAAAAAAATGGCATTCGATGATGAAGAAAGTCAAAGT
GATTATGGTTCATTGATATCACCAAGAAAAACTAAAGAGagGACAGCTAC
AATCAAGACGCTCAAAGCTGACGATATCAAACTGTTACAGCTTGAGGATG
AAAATGCATGGCGAATCAATCAAGTATCAAATTCTATGAAAGAGCTGGTT
AGAGTGCGTCAAATCTTGGACAACAGCGAGCACGACCGTTTAAATGAGAG
ACGTGAAAAACTGTCAACTGTGCATAAATTGATTGACCTAACCAAAGTAA
AGAATCAAATTGAAAGACGGCTACAAGATTTTAATAATCAGACTACAGAT
GAAGAATCGAAGTACACCCGTTTATATGGTAAATACGAACAAGCTTTGGA
GAAGATCAAAGAACTTCGCCAGTTGACAGCATCCGATACTGAGCATGCGC
AGAAAGATTATCTTGATGAACTTGCCAATATCAAGgcGTCTTATAAACGG
GACATGCGTAGTGCGGAAGAAGAAAGCAAGAAATTGAAACAATCATTGGA
AGAACTGTATTCAAGAAGACAAAATAATACGACAGCCACTGACAAAAATA
ATACGCTCTCTGATGTTGAGAATTTAAAGGATGACTTACCAGCGATCGTC
GAAGCTTTATCCAAAGAAGGGATTGAAGTTGAAAATGAGTCATCAGGCAA
ACAAGTGCTGGCTGATCTTTTCAAAGAATACAAGCGTATATTCAACCGGT
TAAAACACAATAACATTGGGTTTACTCATTCAGATGAGGAATATAAGGGA
CTTCAGCGTGAGCTGAGAAGCGAAAAGACAAAAAATGAGAAGAATACAAA
ACAACTACAAGAAAAAGACGATTCTATTGGTATTCTAAAAGGTCAAATCG
ATACTTTGTTAAAAGAACAGAAAGAGAAGCACCTTCAAATGCAATCATTA
CACGATGAAAGTGAATCCTCCAAAGAAGGAATCGATGACATCAAAGCGCA
ATTGAAAAAATCTCGCGAAACATTAAGTAAACAGACTGCTAAGCTTAATG
TGACTGAAGAGGATTTGACGAGAGTTACAGACGAACTTCACGTGACCGAA
GCAGAACACGAGCGTACGAAACGACAGATAGCCGTCAAAGATGCTGAAAT
TGCACGCCTCAAACAAGATCTTGAAAATGAGAGTGATCGACTGAACAAAG
AGATCGAACGTGTAAAGAAATTACAAGAATTACTGGAACAGAAAGAACGT
TCGAATGTTGATGGAGACGACCACGTGTTCACTCTTGAGTTGAAAGTCAA
AGAGCTAGAGAAAGAGCTACATACTTTCCATCAAAAAAACGAGCGGCTGG
TTTCCGAGCTAGATGAAACTTTACAAAGCAGAGACGACTTGCAAAACCAT
TTGAATGAACGAAAAACTGAATTTTCGAAACAAAATACAACTATAAAGAC
CCTTCAAACTAAGAATGAAGAACTATCAAGAGATCTTGAAGAGAAGAGAA
ATTCTTTCATGGAGCTTTCACAAAAGCTTGATGAAACATCAACAGAACTA
TTAACAACTAAAGATCTTCTTATGGAAAAAGACGAGGAAGTGAAACAGGG
TCAATTGCAACTCTCACAAATTTCTGAAGAATTGACTTTAAACGATACAT
TGAAGG
Run BLAST on NCBI

transcript from alignment at sc0000045:16137..28820-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004539 ID=TCONS_00004539|Name=TCONS_00004539|organism=Clytia hemisphaerica|type=transcript|length=12684bp|location=Sequence derived from alignment at sc0000045:16137..28820- (Clytia hemisphaerica)
GAAAAAAATTCATACCCTTCATTATGTATGTAATGTAAATTAAAAAAAAC ACACAAAACGAACTAAAAAAATGGCATTCGATGATGAAGAAAGTCAAAGT GATTATGGTTCATTGATATCACCAAGAAAAACTAAAGAGGTATAGTGTAG CTCTGGTTAAGGAGGCCCAATTTTTGCGCCACATATTTTATTTGTAGGCA AAAACTTGGCAGTTGAAAGCTTTGTTTGAAAATATTAAAAGAAGTCATTA CATTGAAGTCAAAGAAGGCCAGTGTATTAACTTNATGTAGCTCAGGTTAA GAAGGCCCAATTTTTGCGCCACCTATTTTATATGTAGGCAAAAACTTGGC AGTTGAAAGCTTTGTTTGAAAATATTAAAAGAAGTCATTACATTGAAGTC AAAGAAGGCCAGTGTATTAACTTTATTTCTGCACTTTTATTCACAAGTAG CTAAAGGCAGGGTTATTTATATTGGACTGTCTAGACCAGACCTTAGATAT TATGACATCTCAGAAGATTTTCTATATGTAAAAGTAATTTTTTGATTCTA TTGGGAAATTTTGCCATTCTTAGGGAAATCTGTAATTTTTGAATAAACGT CCCTTGTGGTTTAATGGTTCTGACATCATTGCCTTTTCCTGGGAGATGAA GCTCAAGTTTGATAACCACTGTGTCATAACGATTCAATAATCAAGTGAAA TTATATTTTTATTAAAGAAAAACATAGTATGTACAGGTATGTATCGCTTT TTTCTTTGAAGAGGACAGCTACAATCAAGACGCTCAAAGCTGACGATATC AAACTGTTACAGCTTGAGGATGAAAATGCATGGCGAATCAATCAAGTATC AAATTCTATGGTATGTTTATTCATTATTTAACCTACTTCCAAAAATCTAA AAATTTTAAGCATGTAGACAAACAATAGACTCCTCCTCCAACTTATCTGC CAGCTTGATTTTAACTTTTTTGAAATTTTGAAATGGCTGTACCACAGCAC TATCCGAAATTTTGCGATTTTTTGTTTCTTTATTGCCAACTTTAGGATTG TTAGACGTAGTACTGTGTTTATTATTTATTCCCAATCTCTCTATCTTGTT AATTTAAAGTTTGTATATAAAATATAGAGACAGGCTTTATACGAGCCTAT GTTATTATAATAATGGTGAAAATTTTAAATAACATAATTTTAAAGGTTTT ATTTTTACATAAGTGTTCCCGTTTCATATTAGACACATGTTTCATATCAG GACAGTGTCCCCTTATTGTTATAATATGCTAATAAGCCAAAAAACGTTTT TGTTTCCTTTTTCTGACCAATCTTGCTCCACATCCGTGTCAATCCAATGT GAAAAAGCTCGTGAAAAATTGATGCGTAAGCAATCGATATCACCCTTATT TAAAAACAAATCCTTTAATTATAAACTTATAATTTCACTTATGATTTTTC ATTTTCACAAATCTAATAGTTTCTACGAAACGTTTTAAAAATACAAAGTT CTTTGAAAGCTACTCATTTTCATAATGTACATTTTATTCAATTTCTAGAA AGAGCTGGTTAGAGTGCGTCAAATCTTGGACAACAGCGAGCACGACCGTT TAAATGAGAGACGTGAAAAACTGTCAACTGTGCATAAATTGATTGACCTA ACCAAAGTAAAGAATCAAATTGAAAGACGGCTACAAGATTTTAATAATCA GACTACAGATGAAGAATCGAAGGTATTTATTCCAGATATGTTTTTTGTAG TTTCCAGTCAGTAGGGTGATGCGAAAAAGTTTCTGGATGGCCATGTTGTA GATCATTGCGCCTTTTTGAGAGATATTTTGTCTTTAACATTCTGAACCGC TTTAAAAAGTTTTCTAAGTAAAAATCTGCGAGCATAGTAAGCGAAAATGA TATATGAACTGACAAGGGTCGCCATTTGTTGGTGTTGTGTTTCAAATGTC AATTATTTGACCTGAAAAGTCTTTTTTGCGCCCTTTAATTTTTTGTGCCT CATAGCAAAAGGGCTCCGCTGGGAGGCGGCTGTCTCGTGCAATCACGTCA CTAGTTCAAATCCTTCTCCAATTTTCTAGTTTTGAAGACTTTGTACTCTG TACAAAACGGTACTTGATGCCTCTCTGCTTGACACTCAGCTATTACCCAG AGAAAGAGTGATGCTCTCCCCTACCATTTGGGTAGATAGCTAATGAAGGG GAGTCTTTTGGGTCGCCTCTGACTTCGGTCGCACTCTTCCTTACTTATTA AGACGGATGATACATGCAATACATACATTAACCATGGTTCGAACACCTCC CCCTCCCCCCTTTCTAAAGTGGGATTGGGAAGGGAGTTTTTCTTAAAAAG AGGAATTTCCTGCATTCTTTCGTTCACCTAGCATGCTAGAATGTTGAACC TTATCTCCCAACCCGCGAAAATATCCGAATCGGTAAAAAAATTTATCTGA AAACAAGCCCTTTGACATATGAATATAAAAGACTGCTGTGCTCAGATTGG TAGGAACATCTTTATATCCGAACACGTTTTGAATATAAGATCAAAGTATA TAAGATTTTAAGAACAAAAGATGTGAAGGCCAGAAATCTCAGAACATTAT AAGAACATTTCAAGGCTTCGCAGATTATACAAAAAGTAATTTCTTAAGAA CTAAAATAATAAAAGATAAAAGACTGGAAAATAAGAACACTTTCAGAACA TTTTTAAGCTTAAAAGACCGCTGAGAGATCATTGACGTTCTTATAAAAAA CGTGCATTTGTTAGCTGTTGAATGTATCTAGGTATCATTTATTTAATGGT GCATTCCATTTGGATTTTCCTGTGTTTGTTTCATGTATACACGTTTTTTT TTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAAC TAAGAAACATCCAAGAAACATGCTGAGGCTGAGAATGAGAAAAAAACATT CTTTAATTCGTTTTTTTAAGAACCTTCCAATCCAGCCTTTTATAAGGCTG ATTATGCCAAAAAGTTTAGAAACATGTAAGAAACATTTAAGGCTAAAAAG GCCGATTTCTTAAGAAACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAA AAAAAAAAAACGTGTATCTTCATCAATCTTTAAATTTGAGTCATGAATCG CAATTCACCTTAAATATTATTATTTTCAACTTTTTTCGTGTTTCTTTTCT TACGATTTTTCCTTTCCTACTGGAAAAACTATGCTTAGTTAGCTGTTCTT ATTTTGCTGGGTATGCTTATTTGCTGAGCTTTAATTTGTCTGTTACAGGG AATATTCTCAACTTCAGTTGAGCTACAATCTGACAATGTCTGTGTGTCTG TGTGTGTGTGTCTGTCTGTCTGTCACAAAAACTTTAGGGCAGCCTGGAGA CTTCAAAAGTGGTCGGATTAGGTTGAAATTTGGCACACTTGTTCCTTAGG TAAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAATTTTGATTTTTGGG GCCTGGGGACGAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGCC TGGAGACTTCAAAAATTGTCGGATTTGGCTAAAATTTGGCACACTTATTC ATTGGGTGAATATCTGGGGGTCTACAATTGGGCGTATGAAGAATTTGAAG ACACTGGAGTTGAGCCCAGTGCGTTGCGCACGTTCAACTATATTTGAAGC CAAGTCTGTATTCAGGGATATTCGTCTTGTTTCCAATCTCTTTTCTTTAG ATTTTCCATTTCTGCTTGCTAGTTTTTGCTTCGGTTTTAGCTGATCTTTT TTTACTGATATTGTTTATGTGCTGTGCTTTAAAACTAAGTTAGTTGTACT TAAATGGAGGTTGTAATCGCTATGAAAATATGCTGAGCTTGCGAAAATAA TACAGTTTTTGAAATGATTCATCAAAACAAAACAGTGCGCGCCACGTTAG TTGAAAGCCTGGATGTAGACGAAACAAATGGTCTACATTTTGCATGGTGA GTAAATTGCATCTGATTTTGCAAGATCAGCAAACAGCTTCATTATGTATT GATTTATATCAGTCCTATATCACAGAACCGCTGGGAGCCCAGCGCCACTG GAAAATTTGGCCAAAATTCCAGCCCTCCTGGGAAATTTCGTTCAAATTTC ATCCAAATTTCATCATGAAAAAATTGCACTCCAAAACCACCCCTCTGGGT TTTTTAAGCTTGGAACAATAGAATCTCTATCCCCATTGGGATTACGATGG AAAATTTTATCCCTGCTGGTGGGAAAAAGTTTTACCGGGGCTGTGAAACA GGGGTGTTAAAGTTTTAGAATTATGTTTTGTTAAAACTGCAGCGGTCTGC AGGGAAATTTGGCTTGTGTGAAACAATGAAGATATAGAGAATCTTCAATG TTATTTCATAAAATCATTATGAGGACTTGTGGTGAAGAAAAAAATATTTT GTGTTATACGTATAACAAGAAATGAAACTTGTTTTTGCTTTAGTGTCCTG TTTCTAGTTTTAGTTATAGAAACCAAGCTTTATTAAAATAGTCGATATCT CTCGTCATTTTAGTATACCCATTTATAATTCTTTCTGTCTCCTCTGGTGG TGATGAAAAATAAGAAGTTCTTGAGGCACATTTGGATGATCAAGGGCATC AAGTGGCTAAACTTTTTGAGTTTTTTTTCTGTTCATTCGTTCGTCATTAA ATCTGTTTTTATATTTAAAAATGGTTGGATCAAAAGATTCCTAAAGTCAA ATATGCTTCTAGTTTCTATACACTTAACTCGCTCGCTATTTCAAACTGCT ATCATTCAGTGAGAGTAAACTGTTGGGCTAGGGGCTGAATTATTTTGACG ATCAGGCTAGAATTTGAGTATTAGCGAGTTTATATAATGGCACTGTTGAT TACGGTGGGGTGACTGAAGGAATAACCCGTACACGCTTTTTTTATAAGAA TACACTTTATAAGAATGTCCATGATGAAAATGGCTAAAAAATTAAGAATA TGGTAAGAATATTACCATCATAGAATTTAGCAACTGAACCTAAGAATGCC ATTTTTAATGCATTTTAACCTGTAGATTGCCAATTTCGATCCTAACCTAA GAATACCATAAGAATATTTTGGGATGATTTTCGCCAAAAAGTTAAGAATA TCCATGATGAAATGAAAAAACAACATTCTTATAAAAAAAAGCGTGTAGTT TTGACCTGCAAATCGAGGACGGTAAAATTGCTGTTTTACCATGTCGTCTT CAGTCAATCATCAGAAGCTATGACAGGTTGGATTTAGTTCGATTGATTTA TTTATGTTCGGACGTTCTTTATCTCGTCAAAAGCAAAAAAAAACGCCCAC TATGTATAAATTAAAAAAATATTCACAAGACATTGGCAGTAAGATAGCAA TTTATGGTAATATTGCTCGATGTGGTGATGTTGAGTTTTTCACCATTGCA AGGGAAGAACTGTTTATGAAATTCTGGTTTTGTCAGGTACAGTCTATATA CTTAAACAACTAAAGATCATATGGCTATGGAGTTGTATATCTGACAGCTC TATATGTCCGGGTTGTTCCGGTACAGTCTATTTAAATGGGTAAAAACTTC CTAAATTCTAAGAAAGTACATGTCGGGGTTTTGTCAGGCACAGTCTACAT ATTTAAACGACTATAAAGATCTTAGGCGCTATAAAAATAGCGAATAAAAT AAAATATCGTATGCCGAATATTCACTGGCGTCCGTCAGTCAACGGTGCTG ATAGTAATGTAACGAAACCTGGGATGCGGAGGGATGAGGTTGATTGATCG TCATTTACCTGAAAATTTCGTCACAACCTCGTTTCCTGCGTATGATCGGC TTTTCGTTTCTTACTGATAGCGGCGGTACGTGAAGAAGTTTTCCCTGTTG AAAACCTTTCTTTCACAAAAGTGAAGAACTTTCGGCCTTAACTTTAATTT TATCCTGCGAAAAGTTTTACCCCACTAAGTTTTACCCATATGTCCATTTT CATGTTTTAGTACACCCGTTTATATGGTAAATACGAACAAGCTTTGGAGA AGATCAAAGAACTTCGCCAGTTGACAGCATCCGATACTGAGCATGCGCAG AAAGATTATCTTGATGAACTTGCCAATATCAAGGTAATTTTCAATCTTAT AACTTTGCAATGATGTTTTAATTATACAGTGGAGTCTCCATGACAAGGAC ATTTAGAGTTATTGAGTAAGGTTTATATACGACCATGGATTTATTATAGA GACTCTGGATAAACATCAAATGAAACGGTGGAGAGAGAAGTATTGTCTTT CTATTGTTTCAGAAAACAATTGATGTTCTAGCTTTGTCCGCAAAGGACAA CTGTCATGGTGGCTCGAAGGACTCTGATTTTGAAAAATGATTAATACTCG AATTTTTAAAAAGTTTTCTAACTTTTTCTATTCGTACTTTTGCTGGCCAA AAGTTTGAAAATAAATGCTAGAATACCAAACGGATACATTTATGAAATCT GGTGTGAGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNATGAGTAAAATCAAACAAAATGCTTATAATGACACGAAATTTT GAATTGGGAATATCTTTCCAATATTTCTCCGAGAAGAGCTGAGATTGACA TATATTAGATAGCTCCATAGCTCCACTGTGGTATGAAAATCTTTTGGTGG CACGTGGTGGCACGGTGGATTTTTTGAGGTTGAAGTTTAAAAATTTCTGG TGTCAATATTCAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAATGCAATTAAAATAATA CGGAAAATCATTTAATGGTGGAAGGAGGGTGAACAATAATGTCATTACTG CGGACAAGGCTTGTACATGAGAAATTGACAAAAATCAGCTCATTGTTTTT CCAGTGTCTATAATAATTCCATGATACGACTGAAGGGACCTTTTTCGAGT TAAGGGAACATTCGACTTATAGAGGTTCGAGTTAAAGCGATATTGTATAC TACAGTGAGGCATCGAATGGCCTTGAAAATAAGATCGCAATCATCCATCC GTAACAGCCCGACAATTAATATAAAAGGAAAAAGAAACTCTGATCGACTT ACGAGATAAGAATTTTCTGACTTCAAAGCACATTAACAGCTAAATTATTA TAAAAAACACAATTATCACTTTTCATTTCTTGTGTCTTTGTTGAGCCAAA ATGTGTTAATTTTTCTCTCAAAATTTTTTGAATGAAAACACTTTGTTTTT GTGAAAATGATCTTGAAGGTGATCATCAAAAAGGATAAACCAGAAAATCG ATGAACGAGAATATTTATTTCGAATCACTTCGTCATATTTCCACGTAGAA TTTGGGAGTCATGGTATGGTTAGTTGTCTCTACTCAAATTAATTCAAGGG TAGTCTTCGATTTTTTTTATTTCGATTTTAACAGTTGTAAGAAAGCTTTT TGCAATTTTTGAGCATCGAGTACAAGCTGTACCAGTTCAGGGCCCCTTTT CGTAGTTTCCATCCCGCCTAAGGATGGGGTAAGATCACACACCACATTTT ACCAGAGTGTCCACCTAAATGGGTTGAAAGAATGAAAAACGAGTCAAGTT CATAATTATTCATCCTATCGCTAGAAAATTCATCGGTGAAAAAATTATTC AGCAGAAAATATTTGTCGGTAAAATATACGTCATCAATCCGATTTTTCCG TCACTTTTTGCCGACAAATTAAGTATCAACTGATAAGGTGAAGTTCTGAG GGATCAAAAACGGTAGCCAATAGTTGACGAATTTCACTTTTTTTAATTAT TTTTGTTTTTAATTTTCAGGCGTCTTATAAACGGGACATGCGTAGTGCGG AAGAAGAAAGCAAGAAATTGAAACAATCATTGGAAGAACTGTATTCAAGA AGACAAAATAATACGACAGCCACTGACAAAAATAATACGCTCTCTGATGT TGAGAATTTAAAGGTAAGAAATACCTAGTGTGTATATTTTAGCAGGTGCT AAATTTCCGCGAGATTTTAGGCACAATTTCACAAATTTAATTATTGTTTT ATTTTAATTTAGCTTTATTTTCTCTAAAACACAAAATTGCGAAATGAAAT TGACGGGGAAAATTCTCACAAAATTGCGAAATGAAATTCACGGGGAAAAT TCTCACAAAATTGCGAAATTTTTGAAAATAGAAGAGAAATTAATTTTTTT AGGGATCAGTGATACGTTGATACGTTCGACTTTTTAAGAATCTTTCAGTA TTCTGTATGAAAAATTAATTAATTAAAAATCAAAATTTAATTAATAATAT CAAGTACTATTTTGGAATTTTTGGTATGATCCAGCTAGGGATTAAACCCA CGACATCGCGCACCGTAGCCGAATGGTTTACCTTTTCATTAAAGTCACTC AAATATCAATAAGATAGCAATTCTCATATTTTCCTTTAGGATGACTTACC AGCGATCGTCGAAGCTTTATCCAAAGAAGGGATTGAAGTTGAAAATGAGT CATCAGGCAAACAAGTGCTGGCTGATCTTTTCAAAGAATACAAGCGTATA TTCAACCGGTTAAAACACAATAACATTGGGTTTACTCATTCAGATGAGGA ATATAAGGTACATTTTACTGATATCTTCATTTGTTATGGATCTTAGATGG ACGTTGTTTTGGCGTTCTGGGTTAGATTTATTCCGCCAAGCGCTGGAACT TCTATTTTCACTATAGTCAACAAACACCTACAATTACTTCTTCGTGAAAG TTGTTATGAATATCTTGATCAAGATTCTTACGTCTGTACGAGACAGAAAG AATTCAAAATAACCGACGTATGAAAGAGCCTTTTTGGACCTACCCCGGTG GGGTGGAGGTCCTATAAATTAACCCATGTTCGTTAGTTAGTTAGTTACCA GCTTTCCTCGAGATTGGCTCATTCAAATTTTCTGATTTTTTGCAGAAAGG TGCATGACTATAAACCCTCGAATGTGACAGAGCCGGATTTTCGAAAAAAA AGTTTTTGGGCAAATTTAGGCCAAAAAACGGCTAAAAAACGGGTTTTTTG GACTTTGTGAAAAATTGGACTTTTTCTGATTTTTTGCATGAAAGTAGGGT ACCATCATAGGTAAAAGATGGCTCAAGCAGATTTTTTCAAAAAAATTTTG TTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCAT ACATCAATGTTCTTAGTTAAATTACTCAATTTTTTCATGAGATATATGTT TTTTTTGCTCATGAGGGCTTACTTTTGAAAAATGTATGTCTTTAGACATG AAATTTTGGTTTCTTGGCGTGTTTTTTTATAAGAAACAAACGACTAATTT TAATAGATCGTCACTATGTTCTGAATGATTGTTTAATGGTCACGTAGATA TCAATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATC ACTTGTTCACCTTGAATTTCTGCCCTATTTTGCAGAATTTGAAAAAGCAT AGCAAATCTTTGTGTGAATTTGGAATTATATTGGACACGAACAACTTAGG TTTGAACACTTACTGTTTTCATTAATCCATTCATTCATTCAATATTGCAG GGACTTCAGCGTGAGCTGAGAAGCGAAAAGACAAAAAATGAGAAGAATAC AAAACAACTACAAGAAAAAGACGATTCTATTGGTATTCTAAAAGGGTATA TGAAATTAAAAAAAGTCATCTTAAGTTATTTAAAAATGTTTTTTTCGGAG CCCGAAAACTTGTGCTCCGAACAATTGAAAAAGTCGCAAAGTGGAATATA GACGTTACTGCATAGAGAAAAAATGCCGTAGCGTCTAGTATAGGCTACTC ACTCTTTTCACCTCTTTTCTCCTTTAGTCAAATCGATACTTTGTTAAAAG AACAGAAAGAGAAGCACCTTCAAATGCAATCATTACACGATGAAAGTGAA TCCTCCAAAGAAGGAATCGATGACATCAAAGCGCAATTGAAAAAATCTCG CGAAACATTAAGTAAACAGACTGCTAAGCTTAATGTGACTGAAGGTAATT TTTGAAGGTTTGAAATATATTTACGAGTCTTTTAATAAAAATAAAATTCT TCGAAATACAGTTGACTTTCTCTAATTCGAGCTCGAACGGGGAATCTTAT TTGTTCGAATTACAGAGAGGTTCGAGTTATAGAAAGTATTTCATGAGGGT TTCCCCTTTACGAGGAATAGGAATAAGTTCGAATTATAGGAAAATTCGAA TAGTAGAAATTCGAATAAACGAGAGTCTACTGTACAATCATGGACAAAAG GCCTGTAGACTTTTCAAAAATTCCTCAATAGTGCCAAGATAAGCCTTTTT ACATTTGGGAAATTCCCCAAATGAACCACAAGTGGTTATTTGGCAGAAGA CACCCAAAGGCTTGCTAGCAGTCCTTGTGGCTTTAGTCCTTGTGATTTTT AGACTTTCAAAGACTGAAAATGGGTGAACTTCATCCACACAGGGTCTACT GTACTATTTAAAAGTCGCCTCACGGTGAAAAATCTATCGCATTGAGACAG GCTTTACTTAGTTTGCAGAGGGGTATGAGCATATATTCATAGAAGATGGA AACTAATCGGCTCAGGGTAACTCACGGCACGTTTTTACCAGCTCCTGCCT GAATCCTGAATCCTGAATCCTACTTGTTGAAATACGTTATTAGGGCTATT TACGGTTACGCAGACAGTTTGAAGCATTTTAAAGATAGGGAGGGAGTTTA AACAAATCCACAAAATAGTCTCATAATTGTTTACACCTTTTTATCTTACA GAGGATTTGACGAGAGTTACAGACGAACTTCACGTGACCGAAGCAGAACA CGAGCGTACGAAACGACAGATAGCCGTCAAAGATGCTGAAATTGCACGCC TCAAACAAGATCTTGAAAATGAGAGTGATCGACTGAACAAAGAGATCGAA CGTGTAAAGAAATTACAAGAATTACTGGAACAGAAAGAACGTTCGAATGT TGATGGAGACGACCACGTGTTCACTCTTGAGTTGAAAGTAAGTTTGCCCT GTTTGAAAAACGGATCAAGAAAGCTAACACAATGCCAATAAAGGGCTTTA TAGCGTCAGCTTGTGTTTGGCGCCACTATGTTTCGGTCTATCGAACGATG CATAGAGCGATGGCTGGGTGTTCTGGGTGCCAGTGCCTGAAACCAGCCAA ACCATGTTCGAATACCCCTCCTCTCCAACATTTCGTTCGGGTTCATATAG ATGGTTGGCTGTTGACCCCGTGACAGGAATCGAAAGACCGTCTAAATCAC TGATCACTGGGCTACCCACGTAGAATTTTTGTGTCATTTATGTTAAAGAA ATACATAAAAATCCGAAAACAGGCTCAGAGATGCTTAGGTCGAAAGCTTA ATAAGGCTGAAAAATGCTTGAAAGGATGCTTAAATCTAAAGCATAAATTT AGGGAAATACTGAAAATCCGTAAAATTTCAGCCAAAAAAAGCCATATGCT TATAAGTACAATGCTTATAAAAAAAGCATGTAGCTCTTAAGTACAATAAA TTAAATAATGAATTATAAAGAAGTCCCGACAAGTATAATCTCGTGTTTCC TTTTCACAGGTCAAAGAGCTAGAGAAAGAGCTACATACTTTCCATCAAAA AAACGAGCGGCTGGTTTCCGAGCTAGATGAAACTTTACAAAGCAGAGACG ACTTGCAAAACCATTTGAATGAACGAAAAACTGAATTTTCGAAACAAAAT ACAACTATAAAGACCCTTCAAACTAAGGTATTCTTAAAAATTTCAGATTT CTTAGATTAATATTTGCCTAAAAATTGCTATTCCTTGATAACAAGCTGGG GACTTATCGGGGAAGGAGCCACTTCACAATGGTTGATTAATTGGTTGAGT CATTAGTTCGATTTCGGCATTGATTGCCTTGAATTAAAATCATTTAAATC CTATATTCATCAAAAAAGGTTTTTTTAACCAAAAAAGGTTTTTTTAACTT GTTAAATGGAAATTATCTCCATATTTCCAATCTCCTCAGTGAGGATTGTG AAAGATTTTGGTAAAACCTTGAAACCCAAAAAACCTACAAAGTCCAACCA CAAGAAAGTTTAGATTATTTTGAATTCCTTTTCGTTCTTAGAATGAAGAA CTATCAAGAGATCTTGAAGAGAAGAGAAATTCTTTCATGGAGCTTTCACA AAAGCTTGATGAAACATCAACAGAACTATTAACAACTAAAGATCTTCTTA TGGAAAAAGACGAGGAAGTGAAACAGGGTCAATTGCAACTCTCACAAATT TCTGAAGAATTGACTTTAAACGATACATTGAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002553XLOC_002553Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004539-exon-sc0000045-1575043694:28682..28820TCONS_00004539-exon-sc0000045-1575043694:28682..28820Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:27961..28059TCONS_00004539-exon-sc0000045-1575043694:27961..28059Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:27099..27272TCONS_00004539-exon-sc0000045-1575043694:27099..27272Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:22688..22810TCONS_00004539-exon-sc0000045-1575043694:22688..22810Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:20508..20651TCONS_00004539-exon-sc0000045-1575043694:20508..20651Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:19864..20031TCONS_00004539-exon-sc0000045-1575043694:19864..20031Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:18776..18870TCONS_00004539-exon-sc0000045-1575043694:18776..18870Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:18427..18593TCONS_00004539-exon-sc0000045-1575043694:18427..18593Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:17434..17669TCONS_00004539-exon-sc0000045-1575043694:17434..17669Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:16694..16861TCONS_00004539-exon-sc0000045-1575043694:16694..16861Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1575043694:16137..16329TCONS_00004539-exon-sc0000045-1575043694:16137..16329Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:28682..28820TCONS_00004539-exon-sc0000045-1510915933:28682..28820Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:27961..28059TCONS_00004539-exon-sc0000045-1510915933:27961..28059Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:27099..27272TCONS_00004539-exon-sc0000045-1510915933:27099..27272Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:22688..22810TCONS_00004539-exon-sc0000045-1510915933:22688..22810Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:20508..20651TCONS_00004539-exon-sc0000045-1510915933:20508..20651Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:19864..20031TCONS_00004539-exon-sc0000045-1510915933:19864..20031Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:18776..18870TCONS_00004539-exon-sc0000045-1510915933:18776..18870Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:18427..18593TCONS_00004539-exon-sc0000045-1510915933:18427..18593Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:17434..17669TCONS_00004539-exon-sc0000045-1510915933:17434..17669Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:16694..16861TCONS_00004539-exon-sc0000045-1510915933:16694..16861Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1510915933:16137..16329TCONS_00004539-exon-sc0000045-1510915933:16137..16329Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:28682..28820TCONS_00004539-exon-sc0000045-1491911889:28682..28820Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:27961..28059TCONS_00004539-exon-sc0000045-1491911889:27961..28059Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:27099..27272TCONS_00004539-exon-sc0000045-1491911889:27099..27272Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:22688..22810TCONS_00004539-exon-sc0000045-1491911889:22688..22810Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:20508..20651TCONS_00004539-exon-sc0000045-1491911889:20508..20651Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:19864..20031TCONS_00004539-exon-sc0000045-1491911889:19864..20031Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:18776..18870TCONS_00004539-exon-sc0000045-1491911889:18776..18870Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:18427..18593TCONS_00004539-exon-sc0000045-1491911889:18427..18593Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:17434..17669TCONS_00004539-exon-sc0000045-1491911889:17434..17669Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:16694..16861TCONS_00004539-exon-sc0000045-1491911889:16694..16861Clytia hemisphaericaexon
TCONS_00004539-exon-sc0000045-1491911889:16137..16329TCONS_00004539-exon-sc0000045-1491911889:16137..16329Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:16137..28820 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.13336 3.02747 1.50267 0.997374 60.7929 50.409 24.5604 27.2512 12.8614 20.5731 21.3 11.9264 2.93995 3.18183 3.95172 4.12673 4.79846 5.50389 3.86806 3.81763 3.73486 3.24516 5.76069 5.33644 5.64309 8.15666 4.98944 4.43916 6.0574 5.02922
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004539 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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