TCONS_00004535 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004535
Unique NameTCONS_00004535
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1590

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004535 ID=TCONS_00004535|Name=TCONS_00004535|organism=Clytia hemisphaerica|type=transcript|length=1590bp
aaataggGTGTTCGAGAAGATCGTATCATGGTTGAAGAAGAACCTCTAGT
GGAAGCGCAACGCGATGGAGATCTCTTTGCTGCCAATGACAACAACGGAG
GAGGGGATTTTATGAACGATGAATTGGATTGGCTAATGGAGAACACTCCT
TTGTCGACCAATCCTGTGAAGGATGGAAGGCAATCAGCCAATCAGAAACG
AGTACATGGAGTTATgaatGATCTGAAGAAAGAAAAGGACAGTATTcaac
aaaagttgaaaatcaaagaaaaagaactgcaaaaagttcaacaaaatttt
gatgagaaGGAACAAGAGATTCAAAGGATGAAGAATGAAATGATACGTAT
GACTGACCAACAAAAGCTGGCATCGGAGAAAGCAGGTGAAGAGAAAGAAG
CTGTGGAGTGTTTGAGATCACTGGTAGCAGACAACGAAGCTTACGTTAAA
TGTATTGCTGAACAACAAAGTATCATCAATTCGCTGAAGAGTGACAATTT
TGAGATATCAAGACGCATGAACGATACACTACACTCGCTTGAAGCAGAAT
GCGACACGTCGTTAAGAATGAAAGCAAAATTAAAGAACGTCATGGAAATC
AGCCTGACTCGTGAAAGTGACAAGAATTTCTTACAACGACAAGAAATTGA
AACACTAAAGAAACAACTAGAGGATATTCGtACTGAGCGTCAACAGTTAA
AGTTAGACCTGGAAGATAAAGTGTACGAACTTGATAAAACACAAAACGAT
TTGACTAGCCTGAAAAGTGTGGTTGAATACAACCTTGGTAGCATAGATGC
TGAAAAAAGATCAAAAGATTTTGTTGAAGAACAATTGAAACTGGTCATTC
AAGACCGTGGACACACTCTACAGAAACTTCGGTCATTGGAACTGGCCAAC
CAAGTCTTACAGAACAAGCTTCGTGATTTGCAGAAATGGCATAATCAAAT
GGAATTTCAACTGTTCAAATCACGTGATCACTACCAACCAATGACACCTT
CACCTGAAAATGTTGACTCCAATGAGCTGTGAATTCCGTAAAAAGCTATG
TTAAATTCGTTTGGATGACTGAGCAAAATCATGGTGAACCATCAATTACT
GCTTTATACAAAAACGTTGACTCGGACGTGTAGTGACTGCCGCACAAGAC
GctgttgaatattttttgggTAATAGAGAAAAATTATGGATCCTAGTAAA
CCAATGACACCTTCACCTAAAAATGTTGACTCCAATGAGCTGTGAATTCC
GTAAAAAGCTATGTTAAATTCGTTTGGATAACTGAGTGAAATCATTAATT
CAATTGACTTCAATTGACTCGTGAACTATAGTGAACCAATGACTTATTCC
TAAAAACATTAAGTCCAAGTTATGAGTTTATTCGTATAAAATGATGTTGA
AACACTTTTGATAATCAAGCGAAAATTTGGACTAAATGTTAAATTTGTTC
AAGCCGTTCCTTTATCTGGAAACATTGACTCGAACAAATTGTGAGTTTCG
TATAAAATGCTGTTAAAATGTTTTGGATAATCAAGCAAAATCATTGATTA
CCGCAAATCAtcagtgaggttaagtaaatcggtataATCN
Run BLAST on NCBI

transcript from alignment at sc0000045:2440..14981-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004535 ID=TCONS_00004535|Name=TCONS_00004535|organism=Clytia hemisphaerica|type=transcript|length=12542bp|location=Sequence derived from alignment at sc0000045:2440..14981- (Clytia hemisphaerica)
AAATAGGGTGTTCGAGAAGATCGTATCATGGTTGAAGAAGAACCTCTAGT
GGAAGCGCAACGCGATGGAGATCTCTTTGCTGCCAATGACAACAACGGAG
GAGGGGATTTTATGAACGATGAATTGGATTGGCTAATGGAGAACACTCCT
TTGTCGACCAATCCTGTGAAGGATGGAAGGCAATCAGCCAATCAGAAACG
AGTACATGGAGTTATGAATGTACATGTTTTTTTTTTTATAAGCAAGTGTC
TGTCCCTATGTCAGGCTCGCATTATGCTTAGCATTCTATTGTTCTCAAAC
AATAGAGCCATTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTTTCCATTGTTTTGTTTTT
TTCAAAAATATTCTATTTGTATGTGTGCGTGGGAAAAATAAAAATAGCAA
CAGTTCTTGCAACATCTACTTCCGTGTAAGACACATTCCAGGAGATGTTA
ACAAACAAGCTCCCGAATTCTCAAAACAATGTCTTGGTTGATTTTTGTCA
ATTTGTGTTTTCTTTCTCGCCAATATCTTCTTTCTTCTAACTTTCAAGCT
AACGAAGAGACGTCGAAATGCAGCGTCTCCAATTATTTTCAGAAAATGGT
TGAACCCCCACAAAATCGAAGTCGCCACGCTTGCTAGGCCTGTACAGTAC
CGAGTTTTATTTTACACTTGTTTCTAGCTGAGGAGACAAATATTTAAGTT
CGAATTACAGAAAGATTGAAAAAGTAGAGGTTCGAGTTATAGAGTATCAA
ACATCAAACGCTCTTTTGGCCATAGGACTTAAAAAAGAAAAAGACGGCAT
TTTTTATTTAGATTCTCTTTTTTCTCTTTTCTGTCTTGTCTTCCCTAAAG
GATGATGGAGCTACAGTTGACTCTCTCTAATTCGACCTTCAAGAAACCAA
GAATTTTCTTCGAATTAGAGAAAAATCGAATTACAAAAAGTCATTTTAGA
TGATTTTCCAGCTGTGGGCACCAATATCTTAGTTTGAATTAAGAAAGATT
TGAATGATTTGATTTCGAATGATANTGCCACCGGATTCTCGAAGCTTCCT
TGCATTAAAAAATCAATAGAAAATAGCTTCTTACAGTGTTAAGTTATTTC
GTCTCATTGTATACAGAGGCTTTTCTGTCTCAAAATTCGCATAATTCGCT
AAAAGCTCAATAATAGGTACTAATTTTCTGTGTACAGCATGGCGTTTAGC
AAGTGTGCAGCGACTTCGATTTTGTGGGGGCTCAATTTTTAAAAGTTGTT
GCATTGATACTAATACAAAATGGAGCAAAAATTTCAGTACAAAAATGAAT
TTTTGTTTTGTTTCGGCGCCCCTTCCAAAGCTTAAGTGTTAATCTAGGTT
GAGTCCAATTTGTTTTCTTAAAACTTTAAGTGCATCGATTCAAGTACCAA
ATCTTTTCCAGACTTTAAAAGAGAAATCGAAGTCAAGATTAAAATATTCT
TAATATTAACTTAATATTTTCGAGAGATTTCCATGATGATCTATGTGAGT
CTTTCTTTCTAAACCTTTCCAAAATTTCACTAAAATCCACCAGAAAAAAG
AATAGACTGTCAACACTGTGATGAATATGATTAATATTGCACTATGCTTG
AACCAAAGCAAAAAAGACCCAAAGAGAAAGATGGTGTTGTTTTGCAAAAG
CTCCTCTTTTGACAGAGGAGGAGAGGAGATTCTTCTCAACCTTTTCAAAT
CCATTTACAAAAATCCATCAGTCTTTAAAAAAAAAGAATAGACAAACGGG
TGTCACTGACGAATGCCAAATTCGTTCAATTTTCATCAATAAAGAATATT
TTTCAGAATATTCGTTCACGTACTAAAAATAACATATCCAACTCAAGGCT
GGTATATTATTGTCTGTAAGATTTTTAAGTGCAAAAGTAGATGGCCAAAA
TCCACCATTTCAAAATAATGTCAATTTAAATTATCAAACTACTAATACCC
CGAGTAGATGATAACTGTCTTTAAAATTTCCAATGCAAATGTCGATGGCC
GAAATAAAATCCATCAGTATATAATGTTACCCATATAACCAAAATCAGAA
CCATTATGCCGTAGTAAAACTTTTGATGAACATAATGCCTTTGGTTACAG
CTTGATCAGTCTGTCCATGATTTTACCCCATTTCCATGTCTGATAAATTT
CTGGTAAAAATTGAAATAAGTTGTTCATTTTTCGAGTTTTTTTTTTCAGC
GTCCATCTCCAACAAATTCTTGCAAAGAATGCGAAGTGTTTGTCTACTTT
TTGATGATAATTTTCGAACGTACATACTTTTTCGAACGTAACACGTTCGA
TTGTTCGAAAGTTCGAAATGTTGACTTTCCATTGTTTTGTTTTTTTCAAA
AATATTCTATTTGTATGTGTGCGTGGGAAAAATAAAAATAGCAACAGTTC
TTGCAACATCTACTTCCGTGTAAGACACATTCCAGGAGATGTTAACAAAC
AAGCTCCCGAATTCTCAAAACAATGTCTTGGTTGATTTTTGTCAATTTGT
GCTTTCTTTCTCGCCAATATCTTCTTCCTGCTAACTTTCAAGCTAACGAA
GAGACGTCGAAATGCAGCGTCTCCAATTATTTTCAGAAAATGGTTGAACC
CCCACAAAATCGAAGTCGCCACGCTTGCTAGGCCTGTACAGTACCGAGTT
TTATTTTACACTTGTTTCTAGCTGAGGAGACAAATATTTAAGTTCGAATT
ACAGAAAGATTGAAAAAGTAGAGGTTCGACGGCATTTTTTATTTAGATTC
TCTTTTTTCTCTTTTCTGTCTTGTCTTCCCTAAAGGATGATGGAGCTACA
GTTGACTCTCTCTAATTCGACCTTCAAGAAACCAAGAATTTTCTTCGAAT
TAGAGAAAAATCGAATTACAAAAAGTCATTTTAGATGATTTTCCAGCTGT
GGGCACCAATATCTTAGTTTGAATTAAGAAAGATTTGAATGATTTGATTT
CGAATGATAAGGGAGAGCTGACTATATGATCGAACACTCTTTTGACCACA
GGATCTGAAGAAAGAAAAGGACAGTATTCAACAAAAGTTGAAAATCAAAG
AAAAAGAACTGCAAAAAGTTCAACAAAATTTTGATGAGAAGGAACAAGAG
ATTCAAAGGATGAAGAATGAAATGATACGTATGACTGACCAACAAAAGGT
ATTGAGATTCTCTTTTTGTCGGAATTTCTGTCTCGTCGGCTTTTCCAAAA
AAGGACGCTTTTTTAATAGGGACACAAAGGTTCCAATTCCAGGAACAATT
TTAAAATAATATCAGCTTTAAAGATTGGCTGATTTGAACCATTTTCAAGT
TTATAAGTGAATAGAATTTATCTCCGAGTAGATTCTGATACTCCGTNCTT
TCTTTCTCGCCAATATCTTCTTCCTGCTAACTTTCAAGCTAACGAAGAGA
CGTCGAAATGCAGCGTCTCCAATTATTTTCAGAAAATGGTTGAACCCCCA
CAAAATCGAAGTCGCCACGCTTGCTAGGCCTGTACAGTACCGAGTTTTAT
TTTACACTTGTTTCTAGCTGAGGAGACAAATATTTAAGTTCGAATTACAG
AAAGATTGAAAAAGTAGAGGTTCGACGGCATTTTTTATTTAGATTCTCTT
TTTTCTCTTTTCTGTCTTGTCTTCCCTAAAGGATGATGGAGCTACAGTTG
ACTCTCTCTAATTCGACCTTCAAGAAACCAAGAATTTTCTTCGAATTAGA
GAAAAATCGAATTACAAAAAGTCATTTTAGATGATTTTCCAGCTGTGGGC
ACCAATATCTTAGTTTGAATTAAGAAAGATTTGAATGATTTGATTTCGAA
TGATAAGGGAGAGCTGACTATATGATCGAACACTCTTTTGACCACAGGAT
CTGAAGAAAGAAAAGGACAGTATTCAACAAAAGTTGAAAATCAAAGAAAA
AGAACTGCAAAAAGTTCAACAAAATTTTGATGAGAAGGAACAAGAGATTC
AAAGGATGAAGAATGAAATGATACGTATGACTGACCAACAAAAGGTATTT
AGATTCTCTTTTTGTCGGAATTTCTGTCTCGTCGGCTTTTCCAAAAAAGG
ACGCTTTTTTAATAGGGACACAAAGGTTCCAATTCCAGGAACAATTTTAG
AATAATATCAGCTTTAAAGATTGGCTGATTTGAACCATTTTCAAGTTTAT
AAGTGAATAGAATTTATCTCCGAGTAGATTCTGATACTCCGTGCATGGCA
CGTATCTCTAGATTATCGTTTCGTAGTACACTCTGTGCGCATTGTCTGTT
TGATAAAAAACTTTCCGCGCGGAAAACTCTGCGATGAAGTATGATTTATA
AATAGCGATACTTCTCACGTCGTCTCCCCTCTCTCACCCGCACTTTATCG
CAGTGGTCGATTTGAAAATCTCAAATCAGACAATGCAGCAGACCCTCTAC
GGTAATGAATTTTCAAGTTAGCGGTAGATATTGTACATATACATATTGTA
CAGACTAGGCACGTTTTCACGCTGACGGTAGGCTGTACGTGTCCCCTCTG
ATATGTTTTGATATAAGGTATGCGTATTGTGTATAAAACCCTCGTCTGAT
AGTTTGTAGACTTTAAAATGCCAAATTTCTTAAGAAATTGCCCAAAAATG
CTCATATAAAATGATCAAAATAATAAGAACATTTTAAGACAATTTTAGGC
TTAAAAATCAAAATGCTTCAAAAATTCTGAACGTTCTTATGAAAAAGAAA
TCAAGGGTTATCGATTGCCATGCTTAGATTATCTGAAAACCTTTTACTTT
AAGAAAAAGAAAATTGGCTAATTTCAGGGCTGGAGAGAACAAAACTGTGT
ACTATTGATTTTTAGCTGGCATCGGAGAAAGCAGGTGAAGAGAAAGAAGC
TGTGGAGTGTTTGAGATCACTGGTAGCAGACAACGAAGCTTACGTTAAAT
GTATTGCTGAACAACAAAGTATCATCAATTCGCTGAAGAGTGACAATTTT
GAGATATCAAGACGCATGAACGATACACTACGTAAGCTTGTTTAGTTTAT
ATTGATTGCCATCCATATGCTTACCATGCTAAAAAATTTAAAGGCCATAA
TGGGCTTTTCCAGAAAAAAATTTTACCCCCACTGTTGAGGATATTGATTT
TTCGAAGTATCGAACCCCCTGATTAATCACGGGTAATCAGGACTGATTGC
GCTTCCCGNTTTTCACCGCCACTGTTGAGGATATTGATTTTTCGAAGTAT
CGAACCCCCTGATTAATCACGGGTAATCAGGACTGATTGCGCTTCCATAA
CGGCTTCCCGTTTGTAAAACCTTCAAAATTCGATAGAAGCACCCCCTTCT
CACAGACCCGGCAGGATTTTTCAGCCAGGGGGGGGTATGACGGACCAAAA
TTTGATGTGGATTAATGTTCCCATCTTTTTTATGGCTGGGATTTGATTTA
AATTTTTTCGAGCCAGAAAACTCAATGGAGATGGAAAAGATAACATAATA
TTTTGCAGTGAAAATTTGTTTATTTTCAGCGGGGACAACATTTGGGAAAT
AATTTTCCACTGGGGACGATGATTTGACCAATTTTTTCCAGTGGGAAGGG
GTCCTAGTGGGTCTTTGAGAAGGTGGTTTTTTCGACCATGGAATGGCCCC
TTCAGTGGATTCTCGGTAATTAGTAGTTCCAAAAGGGTAGGAAACCCCCG
GCTGTGAGAAAACGAAAAAGTTAAAAATATCTAAAACAAAGGTTTCAAAA
ATGTCCGACGTTTTTTAAGTAGTATTACTTTCACAATTTTGTTTCAATTC
CTTGAAAAATCGCTTGAATCGAGTCTTGGAACTTGACGCAATGCTCTTGG
TATTTTTCATCGAAGTGTCTAGACGATCCCATCGTCTACATGATTTAATA
ATTTCACCAAAAAGGGAATAATTCAGGGGGCGGGATGAATTTGAAAACGA
ACTTTAGTTCGGAGCGGACAGGTTTATACAAACTGTACGTGATGGCTGTA
AACTCTGCACACTGCGTTTGCTATCCCTCTAACGGACGATAGCCGTTATT
CTCGTACTTCTTCGTTTAAGAATATAATGCCAAAAATGTGCATCAACATA
CATTTTAGACTCGCTTGAAGCAGAATGCGACACGTCGTTAAGAATGAAAG
CAAAATTAAAGAACGTCATGGAAATCAGCCTGACTCGTGAAAGTGACAAG
AATTTCTTACAACGACAAGAAATTGAAACACTAAAGAAACAACTAGAGGA
TATTCGGTATGTCTTGTGTGGTTCTTTTGACCTTAATTCATGGACGTCAA
TCTTATGCGAAAAAAGGTCACCTCTCGTTACAATACACCTTTTCGACTGT
GGTCGCACGGTCAGGCGCGTGCCACTTAATTATTTAATTATCCTGTTTTG
ACACCTTTTTCTATTGTCTATATATGCGAAAAAAGGACCGGAACGGTTTC
AGCGGAATAAAGCGGACAAAAAAATGCCCGCACGGCAATTGGCGGTTACG
GTCGAAAAGGTGTATACTGTTCTATTATATAATGGGCTTTTCCAGAAAAA
AATTGAATATGGGGGGTGGCCCAAATTACCCCCGGACAGAGAAAATTTAC
CCCCCAGACAAGGTAAATTTTGAGGATTTTTCGCTACCCCTGGACAATAT
ATCCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNACGGACATTTTCTGGAAGAGCCCAATCGAGCACTCTAAGAGGAAAAG
ATAAAAACTTTCCAAGTCGACCAAATTTATAGAGTTAAGGTGAATGAACT
GGTGAGATTACATAGACACAAGAGTGTTATTTAGCGGAATTGTACTGTAT
GTCATATTCTATGTTTTGTTTTTTCAGTACTGAGCGTCAACAGTTAAAGT
TAGACCTGGAAGATAAAGTGTACGAACTTGATAAAACACAAAACGATTTG
ACTAGCCTGAAAAGTGTGGTTGAATACAACCTTGGTAGCATAGATGCTGA
AAAAAGGTATAACGCTCGATTTTCTTTGTGTGCCAGATTTTGATCTTTAA
AGGAATACGAGATTGTTTTAAGTGATTTTCCTGACCTTTCGAAGTTGAAT
TCATTTGATGTGTTTGAATAGGAGATGCACGATATATTGGTAGCAAAACG
TTCTTCGATATAAGTTCTTTGTTCCTTTAACATGTAGTAGTTTGATCGGA
CTAGTTTTCGCAAGATTTAATTTCACGAGCTAAAATAAATTTCTTTACGT
TCGAAATTTTCTAGTTTTATTTTTGACGAATCAGCGTTTTGAATAAATTT
GCGAATAGAACGAAATTTAATTGAAAGTTGTCCTGTCAAAAAGTGAAAAT
ATACCGGGTGACCCACGAAAAAGTTCAGACGTTTCCCGACGTCTTGAGGC
CGAACAAATGTCCCAAAGTGCTTGGAGTTTTGATATTTAGAAAGTAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
ATCAAATTCCAATAGCATTATAACACCATCAATCCCCCTAGAGGCAAACA
AGAAAAATATGTTATTATTGCAAAAACTATTAAAAAGCAGCAATAAAAAG
AAAATTCAACATAAACAAAAACTTGAGCAAAAACGGCTTTAAACCTTCAA
AGGATGTAGAAAAAGAATCACCTTGATGAAAATCATGTGTTTGATTTGCC
GAGTTAAAAAAATAAATAACAGAAATTGAATCTTGCAACAGATTTACACT
GGAAATACTTTGGTACAACACTGACTTATCACATCTGACTATCGCTCGAG
CCGCCATCTTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTATGATCT
GTATAAACAACGCACGCTAAAAGTACCCAAAAAGTTAACCCGATCGGAAG
AAAGTTTAGAAATCAAAGTGAGATCGAAAAATCGGATTTTTTTTTTGCCG
TCTTATGGAGGAACTGGAAAATTTTACCTATTTGAATGCTCAGCTTAGGC
TGACCAATTACTCTCAAAGGTGTTTTTATTAATTATTAATGTCATAAAAC
TCGTTAAATAAGTCAATTTGTAATTGATTGCATGAATTTAATACCTCTTT
TTACGTGTTTTTTACACTTTTCGAAAAGTGAATTTTGACTTTAAAAGCTC
ATAAGCAGAGAACAAGTTGGTCAAATTTAAAAAGTGATGGCTCAAGTTTT
AAGTTAGGATATCTATTTTTTAAATATCAAAACTCCAAGCGCTTTGGGAC
ATTTATTCGGCCTCAAGACGTCGGGAAACGTCTGAACTTTTTCGTGGGTC
ACCCGGTATATCATATTTTACGCTGAAAATCTGATTTTGAGTATTTTACG
TGGATTTCATGAGTCAGCATTTTCACGCGATTTTGCGAGATTTATTTTCG
CGAAAATGGCAAAAATTCGCGAAAATATGATTAGAGTAATTCTATTCAGC
ACGAAAGAAAGTTTTGAAAAGTGACTTATGCTTCTTTTTTTCAGATCAAA
AGATTTTGTTGAAGAACAATTGAAACTGGTCATTCAAGACCGTGGACACA
CTCTACAGAAACTTCGGTCATTGGAACTGGCCAACCAAGTCTTACAGGTA
GTGATCAATACTCAAGCTTTGGGCTTCCTACAATCATGGTCGTAATGGTA
ACATGTATAAATCAAGCAAAATAAATTTTTGAAGATGTTTTCCTCTGATA
AGATATTATTAAGATTTCAATACGTCATTTGAGAATTTGAGTTAATGAAT
TTGTTTTTGTCAAGTTCGTGATTCACTGCTAATTAAGTAATATTACTCGT
TAATTATATTGATAATATCTCATTCATTTTTTGATTGCTTTCCTACTCTT
GGTATATTTCCCTGTTTCACCAATCAAATACACCTTTTCGACCGTAGCCG
CCAATTACCGCGCGGGCATTTTCTTGTCCGTTTTACCAGTCTTTTTTTCG
CACCTAAAGACAATAGAAAAAGGTGCATAAAAGGATCGGATCGAGTTTAG
GGAAATGATTAAATGATAAAGTGGCACGCGTCTGACTGCGCGACTACGGT
CGAAAAGGTGTGTAGGCGAATCTTCTATTTAGAATATGAAACCGCCAAAT
CCTACCTAAGCTGCGCGGCGCCGCGCGAGACATTTTCGCCGCATGGTAGA
TCATGATGCATTGAGACGATCCCCACTGGGCATTTTACGCTCGGGAACAA
TAGAATTTCTATCCCTACTGTGGGGAAAATTTCCACCGGAGCTGTGAAAC
AGGGCTGTTTCCATTGTATATTTCGATTTTGGAGGGATTCAGTGGCTTCT
AGGCTATATTCCCAGCCTTATTGGAATAAAAATGAGCTTTTAAATTCTTA
CATCCTAAGGTCCCAAGCGTTTAAGACTCGTGTTACAGCTCGTTAATAAA
ACTCTACGTTCCAGAATCAAATTAGAGCGCTTGATTTTGCAGGGATTTAC
CCGTTTTATCAAATATTATGCACTTTATTGCATTAAAAGGAGACACGAAA
TCTTAAATTTGAACCCCTTTACTCTATGGTATTCATTCGAGTGACATTTT
TCATTTTTCTGTAGAACAAGCTTCGTGATTTGCAGAAATGGCATAATCAA
ATGGAATTTCAACTGTTCAAATCACGTGATCACTACCAACCAATGACACC
TTCACCTGAAAATGTTGACTCCAATGAGCTGTGAATTCCGTAAAAAGCTA
TGTTAAATTCGTTTGGATGACTGAGCAAAATCATGGTGAACCATCAATTA
CTGCTTTATACAAAAACGTTGACTCGGACGTGTAGTGACTGCCGCACAAG
ACGCTGTTGAATATTTTTTGGGTAATAGAGAAAAATTATGGATCCTAGTA
AACCAATGACACCTTCACCTAAAAATGTTGACTCCAATGAGCTGTGAATT
CCGTAAAAAGCTATGTTAAATTCGTTTGGATAACTGAGTGAAATCATTAA
TTCAATTGACTTCAATTGACTCGTGAACTATAGTGAACCAATGACTTATT
CCTAAAAACATTAAGTCCAAGTTATGAGTTTATTCGTATAAAATGATGTT
GAAACACTTTTGATAATCAAGCGAAAATTTGGACTAAATGTTAAATTTGT
TCAAGCCGTTCCTTTATCTGGAAACATTGACTCGAACAAATTGTGAGTTT
CGTATAAAATGCTGTTAAAATGTTTTGGATAATCAAGCAAAATCATTGAT
TACCGCAAATCATCAGTGAGGTTAAGTAAATCGGTATAATCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002552XLOC_002552Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004535-exon-sc0000045-1575043694:14763..14981TCONS_00004535-exon-sc0000045-1575043694:14763..14981Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1575043694:10288..10434TCONS_00004535-exon-sc0000045-1575043694:10288..10434Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1575043694:9301..9466TCONS_00004535-exon-sc0000045-1575043694:9301..9466Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1575043694:8076..8223TCONS_00004535-exon-sc0000045-1575043694:8076..8223Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1575043694:6776..6904TCONS_00004535-exon-sc0000045-1575043694:6776..6904Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1575043694:4085..4187TCONS_00004535-exon-sc0000045-1575043694:4085..4187Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1575043694:2440..3117TCONS_00004535-exon-sc0000045-1575043694:2440..3117Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1510915933:14763..14981TCONS_00004535-exon-sc0000045-1510915933:14763..14981Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1510915933:10288..10434TCONS_00004535-exon-sc0000045-1510915933:10288..10434Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1510915933:9301..9466TCONS_00004535-exon-sc0000045-1510915933:9301..9466Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1510915933:8076..8223TCONS_00004535-exon-sc0000045-1510915933:8076..8223Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1510915933:6776..6904TCONS_00004535-exon-sc0000045-1510915933:6776..6904Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1510915933:4085..4187TCONS_00004535-exon-sc0000045-1510915933:4085..4187Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1510915933:2440..3117TCONS_00004535-exon-sc0000045-1510915933:2440..3117Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1491911889:14763..14981TCONS_00004535-exon-sc0000045-1491911889:14763..14981Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1491911889:10288..10434TCONS_00004535-exon-sc0000045-1491911889:10288..10434Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1491911889:9301..9466TCONS_00004535-exon-sc0000045-1491911889:9301..9466Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1491911889:8076..8223TCONS_00004535-exon-sc0000045-1491911889:8076..8223Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1491911889:6776..6904TCONS_00004535-exon-sc0000045-1491911889:6776..6904Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1491911889:4085..4187TCONS_00004535-exon-sc0000045-1491911889:4085..4187Clytia hemisphaericaexon
TCONS_00004535-exon-sc0000045-1491911889:2440..3117TCONS_00004535-exon-sc0000045-1491911889:2440..3117Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:2440..14981 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.51282	2.29414	1.14689	0.833145	0	0	0	0	2.41576e-05	0.759145	0	2.22019e-07	0.000711131	0.0485263	1.70886e-09	1.44637	4.46981e-05	0	3.14728	0.0160412	0.000187795	0.00628215	0.0015886	5.27983	0.000108498	0	9.25223e-08	1.47712e-07	3.33895e-07	3.22941e-08
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004535 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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