|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004451 ID=TCONS_00004451|Name=TCONS_00004451|organism=Clytia hemisphaerica|type=transcript|length=1273bp
TTTCTGTTGAAATTGTCAACAGGAACTTTTAATTGCTCTTGATTGTGTAA
CCATAATTATAATTACTTTCTTCGATCAATCACAAATGATATAAAAGACG
ATGCTTGATACTCAAACAGTATCAATTCATACTTGAAACACACAACACAT
AAACAACAACtaaaaagaaatcttcatttttttcaacatATTTCAAACAC
ACATATCAAGAATGGCAATCAAATTTTCATCATATTTCAAGAAATCAACC
ACAGCTGGAACCATCAACAATGTCAGCAAATCAACTGACACCAAgaagaa
acaacaaacaaaaaacacattGCAATCAAGCAAATTATCGAAATCATCAT
CGAATGTGAGCAATGTTAACACCAGCAGCTCTGGCgataagaagaaaata
aaagtgGTTCGTGTCAGCTTTGTTAACAAGAATGGCAACACTTTCCAAAT
GAATTAGATGCAAGATTCAGGAGATGATAAGCAATGGTGGAACAAGAAAT
CCAGTAGAAAATTTGCTGACACCAATGATGGACGAAGGAGGGTCAATACC
ATGAACGAGAAGAATCAACGATAGATTCAAATGTCATTGGCTCAAAATTA
AAGTAGCAATCAATTTATGTGCAATCGAACTCGAAGAAGCCAAGTCTAGA
ACTGGTTGCACTTACACGGTATCATTCAAATCTTAATCCATCCTATCTGG
ATGTCTGGCGTGAAATTTCCAGAGATTAACAAGGAAAAGAAGCTTTTCCA
AGATTTAATCATCTTTGTCCGATCAAGGGAGGACAAATTTGTTGCTTTGA
TACAAAATTATCTTTCTGACTTTCTAATGAACTGGACAGGAAATGTTCAA
TTCTTGTTTCATTGAAATCAATAGCAAATAGCCTGTCATCATCATCATGG
AGTTACAATGACGGATTGGATTCAAATCAATCATGGAGTTTGATCATTAA
TAAATTTGTGGTAAACAAACCAATTACTGAGTTTTAATGATGCCATTAAT
TGGActtatttttgatcaaattgTACAGTAGTAACTTTATTGCTAATTAA
GTTagtaattttgaatttcaatttgaaattgaaaagccggtcttttcaaa
atcaattttatttagtttagtacaaatttagcattttattttttccttta
gTGTAGTTTTTAGACCATCAAATCATGTACATTgttttaaaatgtaaata
tattgatataaatataaaaaatcgtagaaaatattgaaaaatttgaaatg
aaaatatatattgagaattaaac Run BLAST on NCBI transcript from alignment at sc0000044:390267..391539 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004451 ID=TCONS_00004451|Name=TCONS_00004451|organism=Clytia hemisphaerica|type=transcript|length=1273bp|location=Sequence derived from alignment at sc0000044:390267..391539 (Clytia hemisphaerica)
gtttaattctcaatatatattttcatttcaaatttttcaatattttctac
gattttttatatttatatcaatatatttacattttaaaacAATGTACATG
ATTTGATGGTCTAAAAACTACActaaaggaaaaaataaaatgctaaattt
gtactaaactaaataaaattgattttgaaaagaccggcttttcaatttca
aattgaaattcaaaattactAACTTAATTAGCAATAAAGTTACTACTGTA
caatttgatcaaaaataagTCCAATTAATGGCATCATTAAAACTCAGTAA
TTGGTTTGTTTACCACAAATTTATTAATGATCAAACTCCATGATTGATTT
GAATCCAATCCGTCATTGTAACTCCATGATGATGATGACAGGCTATTTGC
TATTGATTTCAATGAAACAAGAATTGAACATTTCCTGTCCAGTTCATTAG
AAAGTCAGAAAGATAATTTTGTATCAAAGCAACAAATTTGTCCTCCCTTG
ATCGGACAAAGATGATTAAATCTTGGAAAAGCTTCTTTTCCTTGTTAATC
TCTGGAAATTTCACGCCAGACATCCAGATAGGATGGATTAAGATTTGAAT
GATACCGTGTAAGTGCAACCAGTTCTAGACTTGGCTTCTTCGAGTTCGAT
TGCACATAAATTGATTGCTACTTTAATTTTGAGCCAATGACATTTGAATC
TATCGTTGATTCTTCTCGTTCATGGTATTGACCCTCCTTCGTCCATCATT
GGTGTCAGCAAATTTTCTACTGGATTTCTTGTTCCACCATTGCTTATCAT
CTCCTGAATCTTGCATCTAATTCATTTGGAAAGTGTTGCCATTCTTGTTA
ACAAAGCTGACACGAACcacttttattttcttcttatcGCCAGAGCTGCT
GGTGTTAACATTGCTCACATTCGATGATGATTTCGATAATTTGCTTGATT
GCaatgtgttttttgtttgttgtttcttcTTGGTGTCAGTTGATTTGCTG
ACATTGTTGATGGTTCCAGCTGTGGTTGATTTCTTGAAATATGATGAAAA
TTTGATTGCCATTCTTGATATGTGTGTTTGAAATatgttgaaaaaaatga
agatttctttttaGTTGTTGTTTATGTGTTGTGTGTTTCAAGTATGAATT
GATACTGTTTGAGTATCAAGCATCGTCTTTTATATCATTTGTGATTGATC
GAAGAAAGTAATTATAATTATGGTTACACAATCAAGAGCAATTAAAAGTT
CCTGTTGACAATTTCAACAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004451-exon-sc0000044-1491911889:390267..391539 | TCONS_00004451-exon-sc0000044-1491911889:390267..391539 | Clytia hemisphaerica | exon |
| TCONS_00004451-exon-sc0000044-1510915933:390267..391539 | TCONS_00004451-exon-sc0000044-1510915933:390267..391539 | Clytia hemisphaerica | exon |
| TCONS_00004451-exon-sc0000044-1575043694:390267..391539 | TCONS_00004451-exon-sc0000044-1575043694:390267..391539 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044 | supercontig | sc0000044:390267..391539 . |
Blast
The following BLAST results are available for this feature:
|
