TCONS_00004404 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004404
Unique NameTCONS_00004404
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1475

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004404 ID=TCONS_00004404|Name=TCONS_00004404|organism=Clytia hemisphaerica|type=transcript|length=1475bp
TAAATAAAAATGTACACGTCTCCTTTGcgaattttagaaacttttacAGA
AAATATGAAACAGTTTTAGTCAAAAGATTTCCAAAGATAACATTTTTGTC
ATAAGTTTGAATCATTCAGAAAAACATAAAATCCTAGTCGAATTTCAGCA
GCTCGCAATGGAAAGTTCATTAGCGTTGTTGATGGCATCTTTTGGTTTAC
TGTATGCGACGGTGAAATGTGATTTGAGTAAAACCGATTGGTTTCACAAC
CGGCTGGAAGAACCGAACTGTTACGAGGCTGACCAAGTGAAATGCGAGAC
ATCTTTGTACTGGCAAGCGTTATGTCAAGTGTGTAAGGATTGCTACAATG
TCTGTCCAGAATGTAGAGACCAGTTGGTGTATTGTAAACAAATGGCGGCG
TTCACCAAAGAGCAACAATGCAATGACCCTGACAGTGATGTTTACCACAA
ATGCCCCAACACATGCGGAAGGTGCAAATGCAAACGTTCTGTTATGGATA
TCCACCATAATTGGCAATGTCAACAACATTTCAAACGTGTCGCCAAGAAA
AGCAGGGCACTACATGACGAACTTTAAGTGTCTACTAATTCCATCGTTTG
ATGAGATCGTTGGATCTTGTATTCGGTAATCCGACAATCGTATTCAATAT
TTATTAATAAACTTTGTACCTGTGTTCGtttaacatttttagaattttaa
ttttcaagtttcaagaTTTTAGTGCTGCTGTATTTGAATTTACGAATTAA
ATGTTTATAGATTGAAATAATTCATACCCATCTTGTTGTTAAATCATGAT
TGTTCCAATTGTCCTATGTAAAAAAAGAAAGGTATAATTTGATATCATAT
GATGTCTGGATCGGACAAGTTTAAAAGCCAGGATCTGAACGGTGGCATGA
TAAAGACAAAAGCGAGTTTTATGTATTTGTACTTCCGAGGACGGTCGAGT
AACTGATGTGATTTGAAATAGCccacagttctgacccgcaTAATCGAGAA
CGGTAAAAGTGCTTGTTTAACTTCGACCACAGTCATTGAAGGTCTAACCG
AAGAAGAACCTAACCGCCCTCCGCCCCCAttgcagaaaaaaataaataaa
catgctAAATACTCTTATGTGTTTAATTGTATGGGCcgcaatttttcaga
aaatatcaCCCCAAAAGCATAttataatgaccccccattCTATGAAATGT
TCctgaaaaagtgccaaaacctttattttcctaggggttttttgggaaaa
tcaccccaaaatcacttaTAATATTGACTCCCCCATTTTATGGATTTCCT
CGCAGAGTACCAACCCCCCtacccctgcttattccaccccctacaattaa
gcacaaaagagtactgCTGAACACAGAAAAACATACCTCTGTTTGAATTC
GTGATATGATACATCCTTGTTTTCTGATAGATTCCATCAAAACCAAGTTt
aacaaacatcaaaattttatatttt
Run BLAST on NCBI

protein sequence of TCONS_00004404-protein

>TCONS_00004404-protein ID=TCONS_00004404-protein|Name=TCONS_00004404-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
MESSLALLMASFGLLYATVKCDLSKTDWFHNRLEEPNCYEADQVKCETSL
YWQALCQVCKDCYNVCPECRDQLVYCKQMAAFTKEQQCNDPDSDVYHKCP
NTCGRCKCKRSVMDIHHNWQCQQHFKRVAKKSRALHDEL
Run BLAST on NCBI

transcript from alignment at sc0000044:244236..261580-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004404 ID=TCONS_00004404|Name=TCONS_00004404|organism=Clytia hemisphaerica|type=transcript|length=17345bp|location=Sequence derived from alignment at sc0000044:244236..261580- (Clytia hemisphaerica)
TAAATAAAAATGTACACGTCTCCTTTGCGAATTTTAGAAACTTTTACAGA
AAATATGAAACAGTTTTAGTCAAAAGATTTCCAAAGATAACATTTTTGTC
ATAAGTTTGAATCATTCAGAAAAACATAAAATCCTAGTCGAATTTCAGCA
GCTCGCAATGGAAAGTTCATTAGCGTTGTTGATGGCATCTTTTGGTTTAC
TGTATGCGACGGTGAAATGTGATTTGAGTAAAACCGATTGGTTTCACAAC
CGGCTGGAAGAACGTAAGCATAATCAAATCATTACAGTGGAATCTCTATA
ACTCGAATGACTCCTTAATTCGAATAAGTTTTATTGTCCCTTAAGTTAAT
AATACCTTATAAACCTCACTCTATAAGTCGAAATTTCCTTACCTCAAACC
AATTTGTATTCCCTGTGCATGCTCGAGTTACGGAGACTCCATTGTATTAA
TTTCTTTCCGACTCAAGTTCAATTTATAATCCAAAGCTTCGTAACGGAAG
TGGCATATGATTTTTACCCCACTTTAAGATTTTGCGTACTAAAAACACAC
AATATTGTACTTCGGTACTTCTATCCGGACCCCCTCCACTTCTGACGTCA
TCATACACAGGCGAAAAATAGTTTCAAAACCATGGTTTTTCATGATTAAA
ATTTCCAAATTTCCCAATTTCTTAAAACAACTTTAATTCTACTTGCCTTT
CTACTATAAATAGATCGCACAAGCTCAAAATAATCAGAAGCAAATTATTG
CGGAATCCAACAACTCAAAAAATTCCTATGATCTAATCCCGAGAAAAGCT
GTAGAACACACATTTCCTAGAGTTATGGAGACACCCGAGCTTTCATTGTT
CGAGTGAAAGAGAATCTACAGTAAAATGTTTAAATATTTTATTCAAAACT
TGTTATAGCGAACTGTTACGAGGCTGACCAAGTGAAATGCGAGACATCTT
TGTACTGGCAAGCGTTATGTCAAGTGTGTAAGGATTGCTACAATGTCTGT
CCAGGTTGGTAGTAATAAGTTATTATTATATTACCGTTTTCACAAACTAA
AACAAATTAATTATCTTGACCATGGAAATCATCATTTTCATTTTTTAAGC
AAACCCGATCCAACAAAACTTCTATCCATTCATTAAATCATACATTATTT
TTTCAAATACAAAATAGTAAATCTTTATTGAAGCTCGGCTGTTCTTATTT
TCCAATTTTTCTTGTCATGCCCTTCTTATAGGAAGTTTTTTACTAGATTT
TCTCCTAATATATAAAGCGTTACACGAAACCCCGCTACGTTGACTTGTGG
AAGCAGACAAACAAATATATCCCTGAAACATTTTATTTATCTGATTGGTA
TTTTATAGACTAAGCATTCCCTTTTTTGAATATATCTATATAAAAGTAGC
TGAAAGTGAATAAATTTAAAGTATTATGCTGCACTATCAAACAAGACTGA
CACGTCAACCTGTGTTTACATTGTAGCCGAAAAGACTTAATAATGACTCA
AACTTTAAAGGTTTTGTTTTTACACAAGTGTTCCCATTTCATATCAGACA
CATATTTCATAACGGGACAGTGTCTGCCTATTGTTCTATTATGCTGATAT
AAGCAAAGAATGTTTTTCTATTCCTCTTTCTGACCAATCTTGCTCCACAT
ACGTGACAATCCAATGGGAGAAAGCTTGTGAATTAAAATTGATGAGTAAG
CAAACGATATCACTCTTATTTTAAAAAGAAAACCTTTAAGTTTAATAATC
TTGATAACTATTAAGCTTGTCTTAGTACTAGTAGGACAACCTAGATTAGT
AGGATACATGCAACATTCAAGGTGGCGTACAGTACCTANCTTGTATTAGT
ACTAGTAGGACAACATAGATTAGTAGGATACATGCAACATTCAAGGTGGT
GTACAGTACCTTATCTAAATTCCAGATCAAAGCCATCGGTATCGGCACTT
TAAGTCAAGCTTGACATTACTTTCTAGGCTTTAAAACCTTTTCCTAGTTC
TAAAGTAATACAGTTTATCGTCGATATCTTTAAGACACTACTAATGAAAA
GATTTATCTGGGAACTTGTCGAAAAAAGCCTTTTTTTATGCTGGTTTTTA
AAAGGTTTTCAATTTTCAGCATAAAAATCTATAGAAGAAAGTAGCTCCAG
TGTACGCTGGATTATGCGGTTGATTCTCACTCAGGTCTTTTTATTCGAAT
CAATTTAACCAGGACGGGATGGGATGTTGCTTACGCTAAACTGTGTAATG
GCTACCTCCAACTTTTATACGACCACCTTAGACCTACATTGCTGAATCAC
ATTAACTGATGACTACTATGCATCTGATCGCCGAACTCCTTGAGACAACG
TTGAGATGTGCTTATTTCTAAATCATTATCTTCCCAGGCGAGCGATGAGG
AGAATTCGGTGGTAGCGGTCAAGGCGTTAACCTGTACTATGACTCACCCC
TACACACCAAACCAACTGAGCTAACAACCACTAAGCTAACCATAGCCACC
AAGTCTTAAAATACCCCTTAAAAGCAAGAGATTGCCAATCTCATTGGATA
CTTTTCTTAACCTTATTCCCACAGATTCAATGGGTCGTTGAGACAGGGAT
CTTCTAATGATCAAATCTAAAATGAAATTCAATTTTGGTTCTTTAAAACC
ATTCAACTTGCATTGAAGACGATTGTCTCTTGTTTCCATGTAAAAATAAT
AGCGAGTACCAATATTGATAGCGCAACATTATTCTTGGTAAGTTTAAACT
TAAGATTGTATTCAAGGCTAAAGAGATAGCAGATGTTCTAGATGATTCAC
GTGCACGGTAGAAATATTGACATAATGAGACCAGCACGAAGGATCGCCGT
AGGTCTTTTGAATCGAAAAAAGGTCACTGAAAATTTACAAAATTGGGTGA
ATAATGATATTATTGGTCATATCTATCCTACAGTGTGTCCGAAGGAAAGT
AGAATAACAAATCCTCAGAATTCATAACACTAACATTTATTCTCGATTTT
TCTATTAGAAAGATCCGTTATAGCAACAGATCCTGAGGATTTTTTTGTAC
CATTATTCCCCTTTTTTCCAGATACACTCTACTGTTTGCTTTTTACATTA
TTTTTGGCATCTTTTTTGTAACAGTAAAAAACACCTCAAGGAATCAAGAT
TTAGATCCAGATAGCAAAGTTTCGAGATGACGAATCTTAGAGATATAATT
CAAAATAAACAGAAACGCATTTCGACACATGACAACTTTAAAAGCGTTTC
AACTTTGATTTACATGACTTGGTGACAAGTGAGATATTTCAAATTGAGTC
AATTTTATTTAAATCAAAAGTAGCCAGAAAAGTGGTCTGTAAAATACCAA
AGGCACTTAACAACTGTTAAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
CTGTTAAGTCAGACTTCTAAACTAAGAATGTATATATAGTTATAGATATT
ATCAACAAAAATGCTTCAATTAATTGAAAATATGAGTCTCAGACAACGTT
TCAGGTGTCAAAACTAGAGAGAGATCTTAATTTCTATGAAAAATCCGAAA
TATTCTGGTCTGTAAAATACACATTTTTCATCCCACCATCTCGAAACTTC
ACTTGAATGTTCCTGGCCTTAAAAACTAACATCTGTGAAATTTTAATGAG
GTTTACTTGGCTTTTTGCTAAGCTATATAGAAAAACGTCAAAAATTTTTC
TTGTATTTTGGGGCAGTTTTGACCGAATTTTCAAAATAAATGGACTGTAA
ATCAAAAACAGTCGTCTAAAATCCATAAAACTTTCCACAATGCTACAACT
ATACCGACTACGAGCAATGAAGGCATTAACATCTATTTCATGGAAGAATT
TGGCCCTGTGTAAAATTTAAAAGTTTTATTTTTTTTTTAAATTAGATTTT
TTCACAAAATTTTGATATTCGGTTCTGAAAAATACACATTATTCTTGCTA
CCATCTTGAAATTTTTCACACACAATCCTTGATGCTTTATCTAAAACCCT
GCAAAGTTTTAATAAGTTTTGATATGTAGTTCATGAGATATCTTGAAATG
CAGTACCCTACCCCAGGCAAATTGGCTCCAAAAACGATTGCCACCCTGGT
TAGCCTGAAAACCATCGCGATTCTCAAAATATAGATATGTTTGAATCCAA
AAACAGTTTCAAACCTTTTTCACCGTCAAGGTGCTACCTCATGCCCAATA
TTGCCTGGACTATAAAATTACTTTAGGGCACCCATCTTCACGTTTCTTTA
TATATAAGAAAATACAAAACTTTAAAGCCCTCGGGTGTTCCGAGCTTTTT
GAGTTTTAAGCCTAATTGTTTTAAACATATTCTTATTTTCACCATCATGC
AAGCATTCTTGTCCATCTCTTAGTAATTTGGGTGTCTTAGAGCCAGCAAA
GCATGATTTTTTCAACTTATTCTTAATTTTTGACCATCGAAACCTTATAT
ATTTTGTTCTTATAACAAAACATGTGATCCACTAAAATGCCACTACCCAG
TGGGCACAGAAAGTCTGGAGGACGCCTATATGACGTCCGAATCACGTCTG
CCCGTCCAAAGCCCGTCCCCGTCCAATCGCAACGTCCTTCAGACGTCTTT
AATAGACTTGATTTTTTCAGGACGTCTAATAGGCGTCCGTAATACGCCCA
AAATTATGTTATTTAGACCTGTGATTGGAAGTCTGGTAGCGAGTGTATAG
AAACATGTTTGTAGCCGGGGGTGCAATATTTCCTAACATTGATTTTGTAA
ATACGCCATTTCGGAGTTCACGACGCCATTTTGTAAGCGGAGCAAATCTA
ATGGCGGGGGTGCAGTCGGCCTCAACTAGAGAATCATTTCAGAGAGCCGT
AAGCTACGATCTCGGACTATTATCGAGTTGTACCCGACTGAGACGGAGCA
AAACAAGCCCCCTAGGGTGATTCCTCCAGCACTCCCTCGTCGTGTCTACA
CAAAAAGTAAACAAACCTTTAAAAATTCGATTGAAACTCATCCTCAAACA
GTCAAAATATAATTTTCCACTTAGAACTAAATCTATCATGGATGTCACTA
CACAAAACCTGAATATTTCTCTTTTTTAGCTTATCAAGAGTCCTCCATTC
TTCATCGTATCTGATTGTTCACATCTAAAAAAACAATGCTGTGACTGGGG
GTCTTTCTATGTATATAATCATATCAAAGAAAACAGGAATGGAATCAAAC
AAAAGGAGTCTCCCTCTAAAGAATTGTTCCGATTCCCTTTTTCTAGGTAC
TTTCCATTGGAAATTCCCATGCCTCAAAGCAATGATAAATAATATCAGAA
CATATTTTTGCTAATTATACATCAGTTTGTTATTGTTTTGTACAGATAGT
AGGGGGAAATTTGTAAAATCGCTCGATTTTTTTAGTCAAAGCACTTGTTA
TACATTTTTGGAAAGCTAAGGGGTAGGGGACTCAAAATAACTTGGGTGCC
AATTTTCTTTCGGACACTTTGGTGTGATTTTCGGACAAATACGACGGTCT
CAGGCAAAAATCATAGAGTGAAAAATTAATGAAAATTTTAGCTTGAGAAA
ACGGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAATTAAGATTAG
TGATATATTGCGAGTATAGGTGATTTCAGTACCTAACTCGAGACATTGAG
CTTCCGAAAGCGCAAAAACTGGACAAAACAGCTGTTTCTGGCTGAAAAAT
ACTGAAAACACTGTTTTTAAGGATTAATATCTCGAGTTAGGTAAAGAAAT
CACCTATACTCGCAATATATCACTAATCTTAATTTTCTGAGAGCTTTCCA
AAAATATACAACAGGTCTCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTTGATTCCCCTACCCCTTAGCTTTCCAAAAA
TGTATAACAAGTGCTTTGACTAAAAAATTCGAGCGACCTCAAAAAAACGA
ACAAATTTCCCCCTACTAAGAGTTTTATATATTCAACATGAATTTGTGAT
TAACAAAACAAATACTGCTAAATACTGCTTTTAGCTCAATAAAAAAAATA
TAAAAAATAATATCTATTAATTAGGAGAACAATGGTGTAAAAAATTTGAT
GTTATATTAGAAATTCAACTAAAAGGAAGAATAGGTAAGTTTGAGTATGC
TATTCATAAGTAAATTTTTGTAAGAAAAAACCACGATCATTTGTTTTATA
AAGTCTTAAAGCAGCTGTGGTGAGAGCAAATTTATCCGTACATAATATCC
ATAATTTTTTACCGTTGACTGTCTATAAAATATGTTTTTTTCAACAGATA
GCCCATTCACAAAGCCTTGATGATTATACACAACACAGTCTAAGATTTAG
TTTATATTCAAAAATTGCCTTTGTAACAGCATCGTATCTTGTCATGAACC
CATCGGTTGATCTTTGATGAACAGGTTCAAAATCAGGAGTATTCCAACAA
AAACGTGTCCTACAAAATTTGTCTGTATTGCCACTTGTAGCATAATTCTA
TCAAAAGAATAGTACCGTGAACGGCCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNACAGTATTCAAATTTCCTTTGAG
AGTAATTTGTCTGCCATTAAAAACACTTCCTCTTTTGTTACTATACAAAC
CAGATAACATCAACCATCAACAAGGCCAAATAAATAACAACTAGTTTTCT
CTCTACCATGTTTGCTAATTCTGCTAAATTCATTCATTTTGTCATTTGTT
TTTCTCTAAAATAAATAATAGGAAAATGTGAAACCATCCTGATACTGTCC
ATCCATACACATATGACAATATGAAATAGGTTGACGAAGATTCATTTACT
TGTCAAGTGAACCGCTGCAATTTGGGATTTAACCTCAGTCGCCTCTGTAC
AGTGATTTTCAAAAGGTATAAAAAATATATCTGAGAGGAGCATAAAGCTA
GCCTAGCTAGTAAGGTTGCTACCAAAACCAACAAGAAGCTTCTAAAAATC
AGATCAAGCAAAGGTTACACACATAGACAGAGAAGAAGGTTATTACGTCT
GCCTAACTAATCCAGTACATAATACTGTAAAAAGACAATGATAAAGCAGT
AATCAAACACTTTTATGATAATTTAGTGAGCAAATACAAAAAGACAGCCT
TCTCTTTCCATTTTCCATCCACCAAGAAATGAGAAACTGCAGAATAGTTT
TTAGAAAGGGGATTCTGTTTTGTTTACAAAGGAATCTCCGCCGGTCTCTG
CCCTTCCACGGCCATTTTTTGCTCCGCCTGCAAAATGGCGTCGCGAACTC
CGAAATGGCGTATGCAAATAATGGAGCGTTCGGCAAGAATTTCACAATTA
TATGAAGTTCATTTTCATATCTTTCCAATTAAGACATTAAAAAATGTATA
TAATATTTTACTAACTGTCAGTTAATAAATAGTTAGTTCAAATAACCCCC
CGACTACTTCTTGAAAATAAAAATGAAATACGGTGATCTGATTGGCCCGT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGATTGTG
AAATAGCTATTTTCCTGTTGGGGCTGTTTAAAGATGAGATAAATATTTTT
AACACATGTATTTTGTGTATAACATATATGTCACATGTCAGACATTGAAA
AGATAACTGCTACTACNTTTCATACAGTAGTATACCGTCATATATTTATA
CGAAGGAATAAAACATTACCACAGGCTCACAAAAACCTAGCGTTTTAAAG
AAATTTTTTGTTGTTGCATTTTGTATTCTGAACATCCTGGTTTCTTCCAC
CACTGATCAAGTTTTGTGTGTTCTCGTTCGACTTTTGGTTTAAGCTTTTC
CATTCTATTTTGTAAACAATAAAACACAAGGGGCCACATGAATTCAAGAC
TTCTTAAGATACACATCNNNNNNNNNNNNNNNNAGGTTCTAGACCAATAA
AATACCTTCAGAATGATATTTCTAACAATTACAAGTGTTTTTCAAACATT
TTCTTTGTTTTTTACAGCAATTAAAGCTGACCTGTCAGCAATGACCTGCG
TCCTGTGTCCTGCGTCCTGGGTCCTGTGTCCTGCGTTTCGAACCAACCNA
ATAAAACAAGGCCTTCTTTTCTCAAAACGTTTGTTTCTGTACTTTGTGTT
GTTTTTCAGGCATTTTTAGTTGGGTTTAATTAGCAAGCGGTCGGCCTTTT
CAATTTTTAGAAAAATATTTTTTCTAATGTGCGTTTCGAATGTTTTGATT
TAGAAACGTTCTTTTTTTTTTAAACATTCGAATATACGAAATTCATTTTG
AACATTCGAATCGCCAAAAAATCGAATGTTTTGTTTTGATTCTTTTTCTT
GAAACTTTTTAGTGAGCCAATTTTAATGTGGTGCTCTTCAGTTTATAAAA
TGTTGGAATAAGATTATTATTTTTGCCACTTTCATTTTTAAGGAGCTTAT
GCTGAAAAGATGGAGCAAAGACTTTTGATTGATCATTTTCAGGTGAGTGA
AATTTCTAAGACGATATTTTCTCTAATAATTGGAATTGGCTAGAAAATTC
TGAAAATTAGATGGCATCATAACATAATGAGTTTCTAAAGTTTCATTTTT
TTGATAAGTTCTTTGGGAAGCAAGTACAAATTTANNNNNNNNNNNNNNNN
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CTCAATCCTGCTTTCTGTTTTTATTTTAGGACGAGATTGAGATATTTTAG
GCTCTTTATCCAATTTTACTCTTGAATTTCTTGCAATTAAGTTTCAGCTT
AGCACTGTTCTTAAATTGTTGTAGCTTCATTACTATCTATTATAAAAAAG
AGCTTGTAGTTATAAAGGTTTTGAGGGTTTTCCACTCTTTCTACTCAAAA
CTTTTGTTTCCTCATTTTGTTTTCCAGATTCGATCAACACTATTGCGTAA
ATCTAACTCGTCAGTCCAGCTGAACCAAAAGATCATCAACATGTTACAGG
TAAACCTCATAGATACTAATATGATACAAATGCTTAGATTCATCCATCAG
ATCTGGGATCATAGTTTCTAAATACCCTCTTTATTAAGTGCCGAGATTTT
GGGTAAAACCTTTCAAGGGAGAAACCTGTACCCTCAGATTTATATCAATA
AAGGTGAAATGGAGCTTACATCATGATCTCAAAAAACTTGCTTTGTAGAC
TAAATTATTTCAGCAATTGGGGATAAAAATAATGGACTGAAACTCGATAG
GAATTACTATTCTCATGTTTTTTATGGCTAAGGAATTCAATTCTTTTGTT
TTTAAGTCAGAAGATTCAGTGGGAAGAGAAAAATAGAATAAAATTTTGCA
GTGAGGATCGGTTTATTTGATTATTTTCAATGGGGACAAAAATTAGAGGA
TGATTTTCAACCGGGGCCAATTTTTCCAGTGGGGAGGGGTCCCAGTGGGT
CTGTGTGAAGGTAAAATTAAGGAAGGACAAATTAACACCCTTTGTCCCAT
ATGTTAATAAGTTATTTTGGCACACTGCTATCCGGAAGGTTATAGTCAAT
AATTATCCTAAAAAAAAAGACATTCCTTTGTTTGATTTTGTCATATTATT
TGTAATTATTTTCATAAATTATTATTTTCCTTTCAATCAAGGTTGTGCAT
TAAGAAGAAGGACTTTCAAACGTGTGTTCGCAGATCGATTTTATCAATGT
CTGACTGAGTCGACTTGAAAGAAAAGAAGGAAACCAAATTTAAACACAAA
GAAAAGCATGTCAAACTTTAATGGCACCAAGTATTTGAAGACGTCCGATA
TATTCACAAGTAATAACCAGAGTAGAAGTTAAAGACTGTTATTAGACTTT
TTCAAATCATATATATTTCATCAAGGCGTAAAATTTGTACGTAGTTTTTT
TCACCCTGTTCAGATACTTGTTTCAGTTGTTTGCTTCAGAAGATAATAGT
TTCGACAAAATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCTGATACAGTGGGCACAGAATGTCCGGATGT
TTATAAAAACCAATAAAATTATAACAAGAAATAAATATTTTGACCATGCA
AATGTCACAATCAAGAAGCTTAAAAAGAGAATACGACTCCATAGAGACGA
CTAAATAAAGTCATCCCGCACGTTTTAATCACGTCCAAAGGACGTCCAAA
TACAAAAATTAAATCCATCTGGACGTCTAAATCACGTCTGAAAAACGTCC
TAAGGACGTCCAAGTACAAACATTGTGTCCACCCGACGTCTGATAAACGT
CTTCAGGACGTCCATTTACAAAAGTTAAGTCCATATTACGTCCTTTTCGC
GTCCCTTTGGACGTCCGTATTGGACCAACATCGGACGGACGGGATCCGTT
TCATTTTTCACGTCCTTAGGACGTCCTAAAGTCGTCCACATTTGACGTCC
TTTCGTCCGAAATGGACCTTGTATGGACGTCCTCTGGACGTCCTGTGCCC
ACTGGGTAGATGGATCCGTGCTCCTACTATTATAAATGTACGACCTGCGG
TTTTGTAGAGGGTTGCGATTCAGGCTAGTAATTATTCTATTCGTGACGTA
GTCTTTTATACAGAAACACCCAAAAAACACCGTGCGTTTGCCACCAGTTT
CATTGTTTAAATTCAAAACTGGTGGCGAACGCCCGGTGTTTTTCGGGTGT
TTCCGTATAAAAGATCACATCATGAATATCAAGAAATATCTTTGCCACCA
CAGAATGTAGAGACCAGTTGGTGTATTGTAAACAAATGGCGGCGTTCACC
AAAGAGCAACAATGCAATGACCCTGACAGTGATGTTTACCACAAATGCCC
CAACACATGCGGAAGGTGCAAATGCAAACGTTCTGTTATGGATATCCACC
ATAATTGGCAATGTCAACAACATTTCAAACGTGTCGCCAAGAAAAGCAGG
TACAGCCCTCTAATATTACAATTTTAGACTAAATCCAAGCAATTTTCACT
GATTTGTTATAAAGATATTTACTTTTTAAAATGAATTTCTCAAGTCAAAT
TAAAAATTCTTGAGCTGTCGAACGTGTTAACGTATTTTTGACGTATCCAG
GCTACGCCGATGCCAAATCGGAAGGCTAGAAAAATATCTTCAACCTTTAT
TAAGCAAAAAAAGAAGCCTTTTTTGACTTGCACCGCACTTAGAAGGGCTG
ATTGAACCTAGACCTTTTTCTTTAAGAGGCATATTTTCCTTAACCCGTCG
TTAGATTTCATTTTCAATTCGGCGATTGTGTGAAAACCTACATGCACCAG
AGTGTATCTCACGTTTATCGCTTCGTAGTACACTCTGTGCGCATTGCCTT
TTTGATAAAAAAATTACCGTACGGAAACCTCTGCAATGAAGTATGATTTA
TAAATAGCAACTCTTCTCTCGTCGTCTCCCTCTTTCATCAACACTCCATC
ACAGCGGTCGGTTTGGAAAATCTCAAATGAGAAAAGACAATTCTACGGCA
ATTTTGAAATTAGCTGCAGATACTGGGTCTGTGTACAGACAAGTAAGTGA
AAGACGTGCGGGTCACGCGTTTTGGATGTAAAATAAGTGGCTTCATTTCT
CATCTAGGAATTTCAACCCTAGCCCATCAGTGATATCTAATTTCATTCAG
TCTTTTTTAATTGATTTTCTTATAGGGCACTACATGACGAACTTTAAGTG
TCTACTAATTCCATCGTTTGATGAGATCGTTGGATCTTGTATTCGGTAAT
CCGACAATCGTATTCAATATTTATTAATAAACTTTGTACCTGTGTTCGTT
TAACATTTTTAGAATTTTAATTTTCAAGTTTCAAGATTTTAGTGCTGCTG
TATTTGAATTTACGAATTAAATGTTTATAGATTGAAATAATTCATACCCA
TCTTGTTGTTAAATCATGATTGTTCCAATTGTCCTATGTAAAAAAAGAAA
GGTATAATTTGATATCATATGATGTCTGGATCGGACAAGTTTAAAAGCCA
GGATCTGAACGGTGGCATGATAAAGACAAAAGCGAGTTTTATGTATTTGT
ACTTCCGAGGACGGTCGAGTAACTGATGTGATTTGAAATAGCCCACAGTT
CTGACCCGCATAATCGAGAACGGTAAAAGTGCTTGTTTAACTTCGACCAC
AGTCATTGAAGGTCTAACCGAAGAAGAACCTAACCGCCCTCCGCCCCCAT
TGCAGAAAAAAATAAATAAACATGCTAAATACTCTTATGTGTTTAATTGT
ATGGGCCGCAATTTTTCAGAAAATATCACCCCAAAAGCATATTATAATGA
CCCCCCATTCTATGAAATGTTCCTGAAAAAGTGCCAAAACCTTTATTTTC
CTAGGGGTTTTTTGGGAAAATCACCCCAAAATCACTTATAATATTGACTC
CCCCATTTTATGGATTTCCTCGCAGAGTACCAACCCCCCTACCCCTGCTT
ATTCCACCCCCTACAATTAAGCACAAAAGAGTACTGCTGAACACAGAAAA
ACATACCTCTGTTTGAATTCGTGATATGATACATCCTTGTTTTCTGATAG
ATTCCATCAAAACCAAGTTTAACAAACATCAAAATTTTATATTTT

Coding sequence (CDS) from alignment at sc0000044:244236..261580-

>TCONS_00004404 ID=TCONS_00004404|Name=TCONS_00004404|organism=Clytia hemisphaerica|type=CDS|length=1680bp|location=Sequence derived from alignment at sc0000044:244236..261580- (Clytia hemisphaerica)
GGCACTACATGACGAACTTTAAAATGTAGAGACCAGTTGGTGTATTGTAA
ACAAATGGCGGCGTTCACCAAAGAGCAACAATGCAATGACCCTGACAGTG
ATGTTTACCACAAATGCCCCAACACATGCGGAAGGTGCAAATGCAAACGT
TCTGTTATGGATATCCACCATAATTGGCAATGTCAACAACATTTCAAACG
TGTCGCCAAGAAAAGCAGCGAACTGTTACGAGGCTGACCAAGTGAAATGC
GAGACATCTTTGTACTGGCAAGCGTTATGTCAAGTGTGTAAGGATTGCTA
CAATGTCTGTCCAGATGGAAAGTTCATTAGCGTTGTTGATGGCATCTTTT
GGTTTACTGTATGCGACGGTGAAATGTGATTTGAGTAAAACCGATTGGTT
TCACAACCGGCTGGAAGAACGGCACTACATGACGAACTTTAAAATGTAGA
GACCAGTTGGTGTATTGTAAACAAATGGCGGCGTTCACCAAAGAGCAACA
ATGCAATGACCCTGACAGTGATGTTTACCACAAATGCCCCAACACATGCG
GAAGGTGCAAATGCAAACGTTCTGTTATGGATATCCACCATAATTGGCAA
TGTCAACAACATTTCAAACGTGTCGCCAAGAAAAGCAGCGAACTGTTACG
AGGCTGACCAAGTGAAATGCGAGACATCTTTGTACTGGCAAGCGTTATGT
CAAGTGTGTAAGGATTGCTACAATGTCTGTCCAGATGGAAAGTTCATTAG
CGTTGTTGATGGCATCTTTTGGTTTACTGTATGCGACGGTGAAATGTGAT
TTGAGTAAAACCGATTGGTTTCACAACCGGCTGGAAGAACGGCACTACAT
GACGAACTTTAAAATGTAGAGACCAGTTGGTGTATTGTAAACAAATGGCG
GCGTTCACCAAAGAGCAACAATGCAATGACCCTGACAGTGATGTTTACCA
CAAATGCCCCAACACATGCGGAAGGTGCAAATGCAAACGTTCTGTTATGG
ATATCCACCATAATTGGCAATGTCAACAACATTTCAAACGTGTCGCCAAG
AAAAGCAGCGAACTGTTACGAGGCTGACCAAGTGAAATGCGAGACATCTT
TGTACTGGCAAGCGTTATGTCAAGTGTGTAAGGATTGCTACAATGTCTGT
CCAGATGGAAAGTTCATTAGCGTTGTTGATGGCATCTTTTGGTTTACTGT
ATGCGACGGTGAAATGTGATTTGAGTAAAACCGATTGGTTTCACAACCGG
CTGGAAGAACGGCACTACATGACGAACTTTAAAATGTAGAGACCAGTTGG
TGTATTGTAAACAAATGGCGGCGTTCACCAAAGAGCAACAATGCAATGAC
CCTGACAGTGATGTTTACCACAAATGCCCCAACACATGCGGAAGGTGCAA
ATGCAAACGTTCTGTTATGGATATCCACCATAATTGGCAATGTCAACAAC
ATTTCAAACGTGTCGCCAAGAAAAGCAGCGAACTGTTACGAGGCTGACCA
AGTGAAATGCGAGACATCTTTGTACTGGCAAGCGTTATGTCAAGTGTGTA
AGGATTGCTACAATGTCTGTCCAGATGGAAAGTTCATTAGCGTTGTTGAT
GGCATCTTTTGGTTTACTGTATGCGACGGTGAAATGTGATTTGAGTAAAA
CCGATTGGTTTCACAACCGGCTGGAAGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002463XLOC_002463Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004404-exon-sc0000044-1575043694:261318..261580TCONS_00004404-exon-sc0000044-1575043694:261318..261580Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1575043694:260577..260672TCONS_00004404-exon-sc0000044-1575043694:260577..260672Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1575043694:245882..246077TCONS_00004404-exon-sc0000044-1575043694:245882..246077Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1575043694:244236..245155TCONS_00004404-exon-sc0000044-1575043694:244236..245155Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1510915933:261318..261580TCONS_00004404-exon-sc0000044-1510915933:261318..261580Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1510915933:260577..260672TCONS_00004404-exon-sc0000044-1510915933:260577..260672Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1510915933:245882..246077TCONS_00004404-exon-sc0000044-1510915933:245882..246077Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1510915933:244236..245155TCONS_00004404-exon-sc0000044-1510915933:244236..245155Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1491911889:261318..261580TCONS_00004404-exon-sc0000044-1491911889:261318..261580Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1491911889:260577..260672TCONS_00004404-exon-sc0000044-1491911889:260577..260672Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1491911889:245882..246077TCONS_00004404-exon-sc0000044-1491911889:245882..246077Clytia hemisphaericaexon
TCONS_00004404-exon-sc0000044-1491911889:244236..245155TCONS_00004404-exon-sc0000044-1491911889:244236..245155Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004404-proteinTCONS_00004404-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:244236..261580 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0280235	0.109309	0.0634593	0.217297	0	0	0	0	0.0708446	0	0.0567831	0.074654	11.7417	11.7874	7.6699	7.00146	3.3449	3.92435	8.0134	9.60118	10.7024	10.0705	3.11672	4.1773	5.11489	6.17606	0.960644	0.533117	0.0622078	0.0316899
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR0179004Fe4S_Fe_S_CS
IPR003582ShKT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004404 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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