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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004402 ID=TCONS_00004402|Name=TCONS_00004402|organism=Clytia hemisphaerica|type=transcript|length=801bp
ATGATACCAAAGTTTGTTTACCAAATGAATTCGATTTGATGTTACCATTA
ATTCTTGAGGATGGTGTTTCTTATCAACAACCTGCCTCTCACCTAATGAA
AGTGATGATCGAAGTTGAAAAAGGAACTCAATCTTTTTCTAATTGCTGGA
TGTATTTGACAGAGGAAGAATCTTACACTGCAAATCGTCCCCTAATTACA
TTGAAGAAGGCTTTCATGATCCCACGATCTATTGGAGGAAGAGCCATTCC
AATCTTGAGCACAAACTCTTTCAACATTTCAAAGAGAAACTAAGAATACC
TTtaatgatttggaaaacgttagctttgaaaaattctttttttaataagg
cACCTATTGTGAATTCTTTTCACCTCAAGAATGTTGTGTTGCTTCTTGCA
TTTGATCGGTTAGAAACACTTTCTAAAGAATGGGTCAACGATACTGGAAG
TGTCAACTTTGATGATTTTGTTGACAAATGGCTTTTCTACCCTTTACCAT
TGCAAGTAAAAGAAGTTGGAAAGCGACTGTACAACTTCTTCAGGGCAGGC
ACTATGCCTTGGGCTTTTCATAAAAACATTCACGTTAAATTTAAaccaaa
aaacaaagaaatatgtAAAGATTACAATTTGAATAGTATGAGAAGTATTT
TAGCAGATTATCTCGAGGATATTATCAAATCAGACGATTGGTGTAAACTG
ATTCATGATTCAGAAATAACAGTCAATATGAACGAATGTCCCTATAGTAG
AGTTAAGGGACCCACAAAGTGTAAACTTATTTGCAAAAATTAAAGTTATA
T Run BLAST on NCBI transcript from alignment at sc0000044:200597..201725- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004402 ID=TCONS_00004402|Name=TCONS_00004402|organism=Clytia hemisphaerica|type=transcript|length=1129bp|location=Sequence derived from alignment at sc0000044:200597..201725- (Clytia hemisphaerica)
ATGATACCAAAGTTTGTTTACCAAATGAATTCGATTTGATGTTACCATTA
ATTCTTGAGGATGGTGTTTCTTATCAACAACCTGCCTCTCACCTAATGAA
AGTGATGATCGAAGTTGAAAAAGGAACTCAATCTTTTTCTAATTGCTGGA
TGTATTTGACAGAGGAAGAATCTTACACTGCAAATCGTGTAAGTGATATG
AAAAAAACTTTCAACACGCAAAAGTATCTGTCTCCCAGAAGTATCTCGCA
GAAATTAAAAGAAATTATGAAGCATTTCTTTACAGATGAGAATGTGATTG
AGAGTTTAAAAAGTGATGGAATTTTTTTGAATTTTGCCAGATCTGAGCAT
TTTTACAAGTTTGGGCCAGCTATTGATGTACTTGTGTCTTACCAAAGTCC
TCAAGGCTTGGGATCGTTTGTCGTGGACGTGGTTCCATTTTTACACATTG
CATCTGTTGGCCAACATGTAATAAATCCATATTATTCTGATTTTGTTTTT
ATGTCTGGTGGTAAAGCCCCTAATTACATTGAAGAAGGCTTTCATGATCC
CACGATCTATTGGAGGAAGAGCCATTCCAATCTTGAGCACAAACTCTTTC
AACATTTCAAAGAGAAACTAAGAATACCTTTAATGATTTGGAAAACGTTA
GCTTTGAAAAATTCTTTTTTTAATAAGGCACCTATTGTGAATTCTTTTCA
CCTCAAGAATGTTGTGTTGCTTCTTGCATTTGATCGGTTAGAAACACTTT
CTAAAGAATGGGTCAACGATACTGGAAGTGTCAACTTTGATGATTTTGTT
GACAAATGGCTTTTCTACCCTTTACCATTGCAAGTAAAAGAAGTTGGAAA
GCGACTGTACAACTTCTTCAGGGCAGGCACTATGCCTTGGGCTTTTCATA
AAAACATTCACGTTAAATTTAAACCAAAAAACAAAGAAATATGTAAAGAT
TACAATTTGAATAGTATGAGAAGTATTTTAGCAGATTATCTCGAGGATAT
TATCAAATCAGACGATTGGTGTAAACTGATTCATGATTCAGAAATAACAG
TCAATATGAACGAATGTCCCTATAGTAGAGTTAAGGGACCCACAAAGTGT
AAACTTATTTGCAAAAATTAAAGTTATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004402-exon-sc0000044-1575043694:201538..201725 | TCONS_00004402-exon-sc0000044-1575043694:201538..201725 | Clytia hemisphaerica | exon |
| TCONS_00004402-exon-sc0000044-1575043694:200597..201209 | TCONS_00004402-exon-sc0000044-1575043694:200597..201209 | Clytia hemisphaerica | exon |
| TCONS_00004402-exon-sc0000044-1510915933:201538..201725 | TCONS_00004402-exon-sc0000044-1510915933:201538..201725 | Clytia hemisphaerica | exon |
| TCONS_00004402-exon-sc0000044-1510915933:200597..201209 | TCONS_00004402-exon-sc0000044-1510915933:200597..201209 | Clytia hemisphaerica | exon |
| TCONS_00004402-exon-sc0000044-1491911889:201538..201725 | TCONS_00004402-exon-sc0000044-1491911889:201538..201725 | Clytia hemisphaerica | exon |
| TCONS_00004402-exon-sc0000044-1491911889:200597..201209 | TCONS_00004402-exon-sc0000044-1491911889:200597..201209 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000044 | supercontig | sc0000044:200597..201725 - |
Blast
The following BLAST results are available for this feature:
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