TCONS_00004380 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004380
Unique NameTCONS_00004380
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2391

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004380 ID=TCONS_00004380|Name=TCONS_00004380|organism=Clytia hemisphaerica|type=transcript|length=2391bp
GAAtttttttgagacttttttttgctaaattttaccAAGGAACTTTTATT
taagtttcttgattttacgTGTATacacaaattatttttcaccccggggt
gaaaaaAATTGCTTGGTGCGAAAAGGTGCACTCGTTTGCACATTCTACAT
GTTTTGAGAAAAAgtataaaacttttgtttggaTGGTAAATATAGGAACA
AGACAAATAAAAACCTGGacgtaattttgaaatttacaaaCCTTGCAAAT
TAGTGAAAAGGATTCATGAGTAATAACATTAGAAATAGctTCCTAGCAGT
TCTCCTGATAACATGTATATATCTCGTGTATATTGGTTGTAAAACATGGT
ATACAGACATAAAGCCGCAAGTAAACAATTTGTCGCCAAATCTTCTGCAT
CCGATCTTGCAAAGACTCTCCATAAAATATGATTCGAAGCCACCCAGTAA
CAATTTGACATCAGAGATTGAGCAAGTACAAAAACTTCCTATAAAACAAG
AAAATAAGACATTACTGACGACAAGAAAAGGCCCTCCCAATGCAGTTTCT
AATCCAGCGACAGCGACCACGACTAAAACAACGCCAAAAACAACGCCAAA
AACAAcgccaaaaacaaacaaaaaagaagaaattaaatgGTTACCGGATG
CAAACAAAGAGCACCAAGAAATTTACAGTCAATTGAAACCCATCCAATGG
TATAAAGACAATTGGAAAGAAAAAGCAGATTGTCCTTATCCTTCCTATGT
CGGCAAAAAATACGAGAAGCTATCTTGGTTTCCCTTGTTTTTGCACCACC
AAATGAAGGTCAATTTATCTGCAGTGCCAGCTAAGCAATACTATGCAGAT
TGTACAAGATTTTGGAGTCACCAACCGCAAACCGATTTTCTTTACCTACC
CCATCGCAAACACACGTGGAAAGCACAAAAACCTCCTCTAAATTATGTGC
GCCCTAATTGTACTTTTGGACAAGGTACAAAGCCATGGACACGTTGCTCA
AGGAAGCATCAAGAATTGTGGAGCTTGCTTGACAAAGAAGGTATCATTTA
TTTCGCACGATCAGGATCGGAGCTCGGAGTCATCAGAAATGGTTCTTATC
TTTCACACGACGGCGATATGGATGTCTATGTAGACTACCCTCCAGAGAAA
TATATCAAACTTATTCGAGACAAGCTTACACCAAGGCCTTATGGAGATGG
ATCAATAGGAAGAGTTGGGGCTGAAACACATTGGAATGTAGCTGGTTGTC
CTCATATCAACATGGTTTTCAGTGATTGGATGGTCAACCAGATGGCATTT
TACAAACGACAACCAACGCACGATGACCTTTGCACGTGTTATTTGCAGTC
TTCTAAGATGGCTTGCCATAAAGACGCAAAAGAAAGGATGTATTATCACT
ACGGGCCGTCCTGGTTTGTTCCACTCAATGCCAAATATGGTGATATGCCA
TGGAGGGCAAAAGGCAGGACCATTCAAAAGAAATTGAGACAGATGATATC
TAAAGATGGAATAATTTACGAAGAAGCAGTGAGAAAGCTTGATCGTAGTA
TTCAGTATACAAAATATGACATGGAAATGACTTTAGCTCAAAATAATGTT
CTACATGCCTTAATTTTAACCTTATAGTACCTTAGTGCATTTCACAGTAG
ACTCCTCTATTTattagcaagtttatgtatttgcacttttgaggacggta
gactGGCGTGATTCGGGAAAACCCGCACTTTTGAGgactgacccgcaaaa
tcgaggtgctgatttaccgtcgttctcaattggtcatgatctagtcaaat
tagaaccttactgTCTCCGctgctgaaaaacacacatacatataCTCGGT
ATTATATACCAAAATGACGCTCTTGCTTGATGagctgatttaaaaaaaaa
actcaatttctttttcagaagCTACTATCGACGGCCCCTGTCATTGGCTT
AAGATCAGCTTTTTTAACtaagcaattttttcagaaaatatgagatcaat
tatttttttcgaaaatctcacttgaaaaaaaatgtttgtccACGTTAGTT
TTAAGGCTACCAGGTACTATAAAGTTGGGTTTTAAGCACTCTTGTGAGTT
AAGGAAAGAACAAAGCTTCCTACCGTTTCTACCAAGTCCTGTAtacaaag
atttattatacactggataaacgactcataaaacgctGGAGAgcgattat
tattattattttcattgtttcagaaaacaattgatgttctagctttgtcc
gcaaaggacaactgtcatggcggctagaaaatgtctgatttaaaaaaatg
ttaatcagtcttattttttaaaagtactctagctctttctttttgtacat
ttgcagaaaaaaagtttgaaagtaaggctagcattcctagc
Run BLAST on NCBI

transcript from alignment at sc0000044:29196..38696-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004380 ID=TCONS_00004380|Name=TCONS_00004380|organism=Clytia hemisphaerica|type=transcript|length=9501bp|location=Sequence derived from alignment at sc0000044:29196..38696- (Clytia hemisphaerica)
GAATTTTTTTGAGACTTTTTTTTGCTAAATTTTACCAAGGAACTTTTATT
TAAGTTTCTTGATTTTACGTGTATACACAAATTATTTTTCACCCCGGGGT
GAAAAAAATTGCTTGGTGCGAAAAGGTGCACTCGTTTGCACATTCTACAT
GTTTTGAGAAAAAGTATAAAACTTTTGTTTGGATGGTAAATATAGGAACA
AGACAAATAAAAACCTGGTAAGAATTTCTCCTTCCTATTTTTAGTACCAG
AACTTTTCTGATACGCAATTAGCCTCAAAGAAAGTTAAGGGCTCTGACCA
TAGTGATTTTTTCATAATTGCCGTGTTTAAAATGTGTTTTCTGACTGATG
TAACCAACAAAACTATGGCATGTTATACATTTTCTGTTAGACAAACTATT
CTTGAATCTGAAAATTCAAAAATTGCATTGAAAAAATTTCATGAAGAAGA
AAATGAAGACTTTTGCGAGGAAGAGTATTTCAACTTTGAAGAGCTTAGAT
TCGGCGAAGAAAAAACATTTTGAAATATTTTTTGCAGTAGATGGTGTATC
TTTTACCGAACAATAAAAATTTTTGCGGAAAATTTTTGTAAATACTTCTT
TGTCTCGAAATCTTCAAAATAGTGGTTTTTCATCAATTTTTCATCCGGAT
TTTGCTTAAAAAAACAGTCATAACTTTTGACACATCTTTTTAGAAAAATT
TTCCGCAAAATTTTAAATAGTTCAATTCTTTGCGGACAGTGTAAAGAAAT
TTTGAAACAACAAAATGATTTACCCATTAAAAATAAGTACTTTTTGTAAA
AGAGGGTGGTGCAACATATTATTAACATCTTTTTAAAGTTCATAACGTCA
TTTTTGCAATTAAATTCTTGATTACTCTTAAGGGATTCGATTAAAAAGCA
ATTTATAAAGGCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTTCAAA
GTTTGACTCTATCCCTCCCGGGTGACGTATCTTTTAACCATATTTTGAAA
AATATTTTTGTGGCAAAAATGATCAGAAAGCAGAAAGGGCGCTATTCCCA
AATTACACCATACCGACGTCCGAGACGGCTCTGCAATTAGATTTTTTTTC
TCGCTTCGCTCGCGTTATATTTGCCGTATTTCTTGATGTTTAGGAAAACT
TGGATNACTGTCAACAAAAAAAAGTAATATATTGACAGTATTGCAACCTT
TCCGTCTATAGACTGACCGTCATCGGAATTAAAAATGTTGATTTCGTGAG
GGCGATAAAGAGAAGTAAAGACTGAATTGTGTACAGATCGAAATTTTGAA
AATCATGCATAGTACTAGATTTTCAACACGCAAAAGTAAAAAACGCAAAC
TATACGTGTATACACNGTACTAGATTTTCAACACACAAAAGTAAAAAACG
CAAACTATACGTGTATACACGCTTTTTTATAAGAATATACTTTACTAGCC
GGTACCCGGCGTCGCACGCCGGTTTAGCTGTTTGCTGAACGCATTTAAAG
TCCTTTGGATGTTGGGAAGGTGGCTTAAACACCCCTTAANACATGGCAGT
TTGAAAAATCGGAAAGTCAAACTTCAGTCCCACTAAGAATCGGAAAAATA
GGAAAATTTTAACTTTTTGCCCCCAGAAAGATAGAAACTTGGTGAAATTA
GTCCCAAAAAGTGAATCAAAATTCAAACAATATCCCTTGTTACTTCTCCT
CTTTATTCTGCTAAGGGTCCAAGGGGCAGGGCCAAAAGTCAGCTCGCAAC
CATAGTCCCCCCGGAAGGCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCTGTTTAAAAGATTTTCTTTTGTTTTGAAAAGAATT
CGAATGTCTCAAATCAAATAGGTCGTTAATTACATTCTAAAATATAAAAC
AAAAGACAAGAAATAAAAAAAAGAGAAAGTCTAATCTATCAATCAAAACA
AAGTCTTTATAAAACGGCGCGAATCTGATTTAACACATTTGTGGAGCAAG
AAGCAAAAGTCATCTTTTAAAAGAACAAAAATTGCTTGCGAAATCGAAAG
TGACACACAGACAGAAAACAAAATGACATACGCGTTATACTATTAATATA
TAGATAAGGATATGGATTTATGATGAAATTGGCCAATGTGGTAAGAATAT
CGCCATCATGGAATTTAGCAACTGAACCTAAGAATACATACCATTTTTAA
GCATTTTTACCTGTAGATTGCCAATAATACCCCAGTGAGACCCAATACTT
TCAAATTTATATCTAAATTTAGGTTGAATTTCAATCTTAACCTAAGAATA
CCGTAAGAATATTTTAGGATGATTTTCCCCCAAAAAGTTAAGAATTTCCA
TAAGAAAATGAAAAAACGCATTCTTTAAAAAAAAAGCTTGACCAAAAGAA
TTGTTGAACCAGATTTATTTATTTTTAAGTTCATCCCGGCTACATGTAAC
CTCCCCATTAGATACAGTAGCTTATTGGTAATTACAGTAAAGCAAAACTA
CGGATACTTTTGGACCACAGACTGTAAAATACACGATACCACCAGTTGAA
CAATCTACCCAGCGTCCCAAAAGTACACGTCACTTAGACTTGCCTCACAA
AAGAAAAAAAAGTTAGAGGGAGTTATTAGAGTTAGAGTTAAAGTCATCAT
GTGGTAATAATGCCAAAGTTTTCATTTTACACCAAAGGCACTATACTAAT
TCACCTTTGGTGCAAACTTGCAAAATTTTTGTGTCAATCGGATAAATATT
CTGAAGTACTCCCCCCTCCGTCCACACGATGCACACACTTTTTTGTGTTT
TTGCAGTAATTTAAGCTGACCTGTCAGACCTGTGTTGTGACCCATAACCT
GTGACCCGAACTTTTACACTCACCACTCAAAAAATGGTCAACATTTTGAG
AACAGGTGCTCTTATAAAAGAGACCCCCCCCCCGGCGGATACCCAATTCA
CGCAATCGCGTGAATTTCAATTTCAATTTTTGAAATTACGTACTCACGCA
ATTTTTTCCGAAATTTATGCAAACCCGATTTTTCGGGAAATCGGGAAATT
TGCCCATAATCAACGGGAAAAGAGAAAATTCACGTATACACCAGAAAACG
TTCACACAATTTCTTTTGTCAATTTACACATTCACGCTTTCAATTTTCAA
TTTTCACAGATTCATGCAACCGTAAAATCACATTTACGCATTCAAACAAA
CCGCTATAGGGGGGGGGGCACAAAAAGGTTTAGAATCTCAATTAGTTCTT
TCAGGTTTTAAAAACCTCTATATGACATCACTAATTGCTTTTATTGTTAG
TTCTATTCTTCTCTTACCTCCATACTTCTTACCAGCTTGATTATAAAAAT
AGTAATAATTAGTCTTTTGAAAAGANTTCTTCTCTTACCTCCATACTTCT
TATCAGCTTGATTATAAAAATGGTAATAATTAGTCTTTTGAAAAGATAAT
AGAGTAAACGAGATTAAAAAGATACCAACGAGAAAAAAGAGTATTGCTCA
GTGAGTTAAGTGAATAATGTTACATATTAGACAGAAAAATTGAGGGAGAG
TATTTTTGTGAGTTTGTCATGATAATGAAAATTGTTTGGTTTTGAGAAAT
TCATCTTGCTTTAAATCTTATAATCTATAGTTTGCTACTCTGTTCTTTCA
AAACTTGCCTTACAAAATTTAAATTTCTTTTCAAACTGTCGCATGTCCTA
AAAATGTTGCGTTTACAAATCATGTTTTATCTACACTGTTTTCCGGAAAA
TCTGGAGTCCCGGCTTCATTAGCGTGGTTGATCAAACAAAACTAGCACAA
ATTGGGGAACCAATTTTCGAAGATTGGGATTTTGGTCCCACTATGAGAAG
TAAAATGCAGTATGCTCGTAAAATTTAGGCAAGCGAAGTGAGCAATTTGA
TTATTTTTCCCCTTTAGGCTGGAAATTACTAATATCTAATTTATAGTTTT
ACTTGCATACACTGAAGTATGGAGTAATTAGTTATGTATCAGACCGTCGC
GTTCGCTTAAAGGAGTATTAGTAATCAGAGACGCCTTTTTGCGTGACTTG
TCTTTCAGCACCCCCCTCCCAAAAAAAAAATTGGTCGCTGGGAGGGGGCA
TTGCACCCTCTCCCCCCTGCCACCACGCTACGGTCTGTCGTATAATCTCG
TCATGGTTTAATTTTAAATTAGCAACACCGTAATTTTTGTTATTGGTTTC
TCGATAACTAATATAATAATTTAAAATTTGAGTTTCGAAAACATGAAAAA
TTGAAGAGGAAAAAGCTATTTATCGGACAGCACAATTAAAAGCGAGCTAA
AGGACTGGATTAGAGTTCGGGCAATCAATGAAACTTTGATTTCAGGCACT
TATTTTCCTTCTAGAACACCGGGTTTTTCAAACAAATTTTGTAAATGCGG
TGCAAAATTAAAGCTTCACTTTTTCTTTTTTAAGAAAAGTTGAAGATTCC
TCTCTAGCCCCTTGGCAGCTTCAGACTCTTATGGTCAAAAAAGTGTAGAT
TTAGGATTCTTATCTTAGTAGTTATCACCTTTAATTACATCTTTTTACCC
TTCAGGACGTAATTTTGAAATTTACAAACCTTGCAAATTAGTGAAAAGGA
TTCATGAGTAATAACATTAGAAATAGGTAAGGCAAATCATTGAAATAATA
TTTTTGATGAAGTTGAAATAAAAATTCAGAATTTTTATCAGCGAGTTGCC
ACCTTACCCCAACCGATCAATTCCCATGATGGAATAAAAAAACACTCTCC
ATATAAAAAAAGTGTGTATATACAGTGTATAAACAGGGATAATAAGTCTT
TACATGAGTTTTTTTCCTTTTCAGCTTCCTAGCAGTTCTCCTGATAACAT
GTATATATCTCGTGTATATTGGTTGTAAAACATGGTATACAGGTAAGTTG
TTATACTGCTTTACTTCCAAATCTGTTCTATTATTTAAATCTATTCAGGA
GCTCCAAATAGCGTTCCGTTTTTTCTCCCATTTTGTTCACTGAATTCACC
CGCCATCTTGATTTGTTTGTCTGACTTGCAATCCCACAATGCTTTGCGAA
GAAAATTCAAAACATTACGTAACCTTAGATGAGCTATTTTTAGATTTGCA
ACGGAACGCTATTACCTGCATTTTAGCTAGAATGTCATTGTTATTGTTTT
GTTATTGGTTGTGCGATGTTTTTCGATGTGCTTGAATATGAATGAATGCT
CAATTGAATAAAAAAGTTACTTTCAGAAAGTGCCCAAAAACGTTAAAAAT
CGACCTATCAAAATTTTATTATAAAAGTAGCAGTCGCAATAGGCTTTACA
TGATTAAGAGCATTTTTCAGTAACAAAACACATAAATTTTGAAACTGAAG
GGTCGAAAGGGTTAAAAATCTTTAGTTTTTCGGTTGTGCGATGATTTACA
ATACCTTCTTTCTTTCTCAGACATAAAGCCGCAAGTAAACAATTTGTCGC
CAAATCTTCTGCATCCGATCTTGCAAAGACTCTCCATAAAATATGGTTAG
TATTCACATAAAAGATTATCTCTGTCATTGAAAATAGAGTTCTTTTTTTC
TTCACACCCGGAGAAAAATCAGAAAATTTAATCTCAGACCCATTGAGGAT
CGGAAAAGAGGAAAATTTCAATCTTTACCCCTAAAGTCATCGAACTTTAG
TCAAATTAGTCCTATTAAGGGTTATAAAAGCCTCCTTTTCAGTCCTGGTA
AGGGTAAGAGGGCGGTACACCGCCCCCTTGGACGCATAACCCAAAATCAG
AGCATGTTTTTACCTCGCCCTCAAACCACTTTCGTAAAATTCTTATAAAT
ATCCTGTTATTTGAATTGGGTCAATATGTACCAGTTTTGATGTATCCACA
CCTTCTTCATGTGATATGACTCGCTTACCATAAAACTTTGCATTAAAATG
ACAGTTGGTAAAAAATGATGCACTGAATTCTTATGAATTTTTTTCAAGTC
GTACGATCCACACATATTTCGATTCGTAAGTTATAAGCAAAATGAAGTGC
GTTGATGCTTTGTCACTAGTCATAATTGTAATACACCCCTGTCTCGCAGC
CCCGCGGTAGAATTTTTTCCCTCAATGGGGATAAAAATTCATGTTGAAAT
CCCAATGGGTATAGAGATTCTATTATTCTAAGGGGATGGTTTTGGAGTGC
AATTTTTAAACATTGAATTACAATTGGGGATGAAATCAAAGTCAATTTCC
AAGTAAGGCTGAAATTCCAGGGTATTTTCCCACCGAGTACGAAATCTTCG
CCAAATTTTCCAGTAGGGCTGGTGTTCCAGCGGGTCTGTGACACAATGGT
GCTGTAATTCTATTCGTTGGTCGGCGCACAAGCGTTACTTACACCGAAAT
ACTGACAACATTTATCAAATGGGTAATGTGCACTTTTTGTTGCAATTTTT
TGTCAGAATTTTTGTTGACTTGTACCATTCTATTGTCTTTTCAGATTCGA
AGCCACCCAGTAACAATTTGACATCAGAGATTGAGCAAGTACAAAAACTT
CCTATAAAACAAGGTCAGTATATATAATTTGTATGAAACATGTTTTCATG
TCTTTCATTTTGATGAGTGTCTCCTTTCTGTCCGATTGTGATCTTAAAAT
GGGGTTATGTAAAATGATTCTCCTTCTCGATGGTTCATAGTAGTTCTTAA
ATCGATTGAATTTTCAGGATAATATTCTCAAGCGGGACAATTTTCGGACC
GACTTTTCCAGTGAGTAGAGGTCTCACTGAGTCTGTTACACACTTTGATT
TACAGAAAATAAGACATTACTGACGACAAGAAAAGGCCCTCCCAATGCAG
TTTCTAATCCAGCGACAGCGACCACGACTAAAACAACGCCAAAAACAACG
CCAAAAACAACGCCAAAAACAAACAAAAAAGAAGAAATTAAATGGTTACC
GGATGCAAACAAAGAGCACCAAGAAATTTACAGTCAATTGAAACCCATCC
AATGGTATAAAGACAATTGGAAAGAAAAAGCAGATTGTCCTTATCCTTCC
TATGTCGGCAAAAAATACGAGAAGCTATCTTGGTTTCCCTTGTTTTTGCA
CCACCAAATGAAGGTCAATTTATCTGCAGTGCCAGCTAAGCAATACTATG
CAGATTGTACAAGGTAACATACTTTTATTCGAAAGATTTGACCACGTCAA
CGAGCCAATACTAGACCTACCGAATTTACTATCTCGGTCTATAAATTGCC
ACACAAAAAGATCACCAAACTTAGCAATTCGTTCATGTCTACCGTATTCT
TCCTAATCTCGAAAATTTAGCTATTCCCTTTCCCACTGTATGTATTTCCT
ACCAATAAACCAAACCCGGAAGTTACCACTAATGCGGTGAACCTGGTGGC
GACCTGGTTGTTCAGCCAAAACATTAAAAACAACGTTGAATTGCAAATGA
AAGCAAGAATGACCGGGTTGTAACATTTACGTTTATGATTGATACCTGTT
TTGCTGCCATCGTTTTGATTTGGCAAATTATCGCAAATATCGAATCGGTC
GCCAACCTGGACGGATAGATTTTATTACAAAGCCATAGTCTGCAAGCGTG
GTCAGAATCTAGTCGGAGATCACTTAAAAAGTCTACTTTAGCTTTACTTG
TTCCTCTTTTTGTAATAACGATAACACAACAGATAACATAATTTTTCTCG
TTGTTCTTCAATATTTAGATTTTGGAGTCACCAACCGCAAACCGATTTTC
TTTACCTACCCCATCGCAAACACACGTGGAAAGCACAAAAACCTCCTCTA
AATTATGTGCGCCCTAATTGTACTTTTGGACAAGGTACAAAGCCATGGAC
ACGTTGCTCAAGGAAGCATCAAGAATTGTGGAGCTTGCTTGACAAAGAAG
GTATCATTTATTTCGCACGATCAGGATCGGAGCTCGGAGTCATCAGAAAT
GGTTCTTATCTTTCACACGACGGCGATATGGATGTCTATGTAGACTACCC
TCCAGAGAAATATATCAAACTTATTCGAGACAAGCTTACACCAAGGCCTT
ATGGAGATGGATCAATAGGAAGAGTTGGGGCTGAAACACATTGGAATGTA
GCTGGTTGTCCTCATATCAACATGGTTTTCAGTGATTGGATGGTCAACCA
GATGGCATTTTACAAACGACAACCAACGCACGATGACCTTTGCACGTGTT
ATTTGCAGTCTTCTAAGATGGCTTGCCATAAAGACGCAAAAGAAAGGATG
TATTATCACTACGGGCCGTCCTGGTTTGTTCCACTCAATGCCAAATATGG
TGATATGCCATGGAGGGCAAAAGGCAGGACCATTCAAAAGAAATTGAGAC
AGATGATATCTAAAGATGGAATAATTTACGAAGAAGCAGTGAGAAAGCTT
GATCGTAGTATTCAGTATACAAAATATGACATGGAAATGACTTTAGCTCA
AAATAATGTTCTACATGCCTTAATTTTAACCTTATAGTACCTTAGTGCAT
TTCACAGTAGACTCCTCTATTTATTAGCAAGTTTATGTATTTGCACTTTT
GAGGACGGTAGACTGGCGTGATTCGGGAAAACCCGCACTTTTGAGGACTG
ACCCGCAAAATCGAGGTGCTGATTTACCGTCGTTCTCAATTGGTCATGAT
CTAGTCAAATTAGAACCTTACTGTCTCCGCTGCTGAAAAACACACATACA
TATACTCGGTATTATATACCAAAATGACGCTCTTGCTTGATGAGCTGATT
TAAAAAAAAAACTCAATTTCTTTTTCAGAAGCTACTATCGACGGCCCCTG
TCATTGGCTTAAGATCAGCTTTTTTAACTAAGCAATTTTTTCAGAAAATA
TGAGATCAATTATTTTTTTCGAAAATCTCACTTGAAAAAAAATGTTTGTC
CACGTTAGTTTTAAGGCTACCAGGTACTATAAAGTTGGGTTTTAAGCACT
CTTGTGAGTTAAGGAAAGAACAAAGCTTCCTACCGTTTCTACCAAGTCCT
GTATACAAAGATTTATTATACACTGGATAAACGACTCATAAAACGCTGGA
GAGCGATTATTATTATTATTTTCATTGTTTCAGAAAACAATTGATGTTCT
AGCTTTGTCCGCAAAGGACAACTGTCATGGCGGCTAGAAAATGTCTGATT
TAAAAAAATGTTAATCAGTCTTATTTTTTAAAAGTACTCTAGCTCTTTCT
TTTTGTACATTTGCAGAAAAAAAGTTTGAAAGTAAGGCTAGCATTCCTAG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002452XLOC_002452Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004380-exon-sc0000044-1575043694:38480..38696TCONS_00004380-exon-sc0000044-1575043694:38480..38696Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1575043694:33771..33841TCONS_00004380-exon-sc0000044-1575043694:33771..33841Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1575043694:33505..33572TCONS_00004380-exon-sc0000044-1575043694:33505..33572Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1575043694:32902..32976TCONS_00004380-exon-sc0000044-1575043694:32902..32976Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1575043694:31884..31952TCONS_00004380-exon-sc0000044-1575043694:31884..31952Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1575043694:31284..31641TCONS_00004380-exon-sc0000044-1575043694:31284..31641Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1575043694:29196..30728TCONS_00004380-exon-sc0000044-1575043694:29196..30728Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1510915933:38480..38696TCONS_00004380-exon-sc0000044-1510915933:38480..38696Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1510915933:33771..33841TCONS_00004380-exon-sc0000044-1510915933:33771..33841Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1510915933:33505..33572TCONS_00004380-exon-sc0000044-1510915933:33505..33572Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1510915933:32902..32976TCONS_00004380-exon-sc0000044-1510915933:32902..32976Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1510915933:31884..31952TCONS_00004380-exon-sc0000044-1510915933:31884..31952Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1510915933:31284..31641TCONS_00004380-exon-sc0000044-1510915933:31284..31641Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1510915933:29196..30728TCONS_00004380-exon-sc0000044-1510915933:29196..30728Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1491911889:38480..38696TCONS_00004380-exon-sc0000044-1491911889:38480..38696Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1491911889:33771..33841TCONS_00004380-exon-sc0000044-1491911889:33771..33841Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1491911889:33505..33572TCONS_00004380-exon-sc0000044-1491911889:33505..33572Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1491911889:32902..32976TCONS_00004380-exon-sc0000044-1491911889:32902..32976Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1491911889:31884..31952TCONS_00004380-exon-sc0000044-1491911889:31884..31952Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1491911889:31284..31641TCONS_00004380-exon-sc0000044-1491911889:31284..31641Clytia hemisphaericaexon
TCONS_00004380-exon-sc0000044-1491911889:29196..30728TCONS_00004380-exon-sc0000044-1491911889:29196..30728Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:29196..38696 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.261072	0.538328	0	0	0.0275202	0	0	0	0	0.208276	0	0	0.795713	1.85874	0.176563	0.512888	2.12404	0.332104	0.653807	0.863348	0	2.89925e-05	0.686948	0.62588	0.600733	0	0.413129	0	0.0310495	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004380 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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