TCONS_00004321 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004321
Unique NameTCONS_00004321
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length223

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004321 ID=TCONS_00004321|Name=TCONS_00004321|organism=Clytia hemisphaerica|type=transcript|length=223bp
TCCTCAATTACACGCAATACGCATCCATGCTACTCCTGTGCTTCCTGTTG
GTTATCAACCAATTCTGGGCATTCTCCACCGACGTCGATATCACTCAAAA
TCCAACATATCATCTGATGGGAAAATTGTTCATTATCTTGGAAATGACCA
TTTTGCTTTTGCCGATATTCATTCTGGTTGTATTTCTCATTGTAAAGATA
TGCaagattgtttttaaaatgtt
Run BLAST on NCBI

transcript from alignment at sc0000041:242967..243189

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004321 ID=TCONS_00004321|Name=TCONS_00004321|organism=Clytia hemisphaerica|type=transcript|length=223bp|location=Sequence derived from alignment at sc0000041:242967..243189 (Clytia hemisphaerica)
aacattttaaaaacaatcttGCATATCTTTACAATGAGAAATACAACCAG
AATGAATATCGGCAAAAGCAAAATGGTCATTTCCAAGATAATGAACAATT
TTCCCATCAGATGATATGTTGGATTTTGAGTGATATCGACGTCGGTGGAG
AATGCCCAGAATTGGTTGATAACCAACAGGAAGCACAGGAGTAGCATGGA
TGCGTATTGCGTGTAATTGAGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002401XLOC_002401Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004321-exon-sc0000041-1491911889:242967..243189TCONS_00004321-exon-sc0000041-1491911889:242967..243189Clytia hemisphaericaexon
TCONS_00004321-exon-sc0000041-1510915933:242967..243189TCONS_00004321-exon-sc0000041-1510915933:242967..243189Clytia hemisphaericaexon
TCONS_00004321-exon-sc0000041-1575043694:242967..243189TCONS_00004321-exon-sc0000041-1575043694:242967..243189Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:242967..243189 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.18039	1.15106	0	0	0	0	0	0	0	3.69624	10.763	0.78613	10.2055	8.96796	13.4052	15.1052	1.77222	1.81647	28.8598	5.25213	1.14126	0	0	2.46089	0	2.26212	1.61854	1.72735	1.31014	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004321 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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