TCONS_00004311 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004311
Unique NameTCONS_00004311
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length175

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004311 ID=TCONS_00004311|Name=TCONS_00004311|organism=Clytia hemisphaerica|type=transcript|length=175bp
ACCCTCAAATGCTTCTTAACATGAGTACATATCTCCATATCAACGCCCAA
GGAGGGGGCGGCAACATTGCATACAGTCTTATCTTGGCATTCTTCTTCCA
CCTTTTGAAATGGTAGATTTTTCGGCAACGGGAGACAATTCTCTTTGTGT
GATAATGGAGATAAAGGATCGTCCA
Run BLAST on NCBI

transcript from alignment at sc0000041:825483..825909-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004311 ID=TCONS_00004311|Name=TCONS_00004311|organism=Clytia hemisphaerica|type=transcript|length=427bp|location=Sequence derived from alignment at sc0000041:825483..825909- (Clytia hemisphaerica)
ACCCTCAAATGCTTCTTAACATGAGTACATATCCCCATATCAACGCCCAA
AGAGGGGCCGGCATACAGTTTTGTTTCGGCAAAGTCTTTCACATTCCATC
AAGTTGTCGACATTCATACTTAACCCTCAAATACTTTCTAACATGAGGAC
ATATCTTCATATCAACGCCCAAGGAGGGGGCGGCAACATTACATATAGTT
TTGTCTTGGCAAATTCTTTCACATTCCATCAAGTTGTCGACATTCATACT
TAACCCTCAAATACTTTCTAACATGAGGACATATCTCCATATCAACGCCC
AAGGAGGGGGCGGCAACATTGCATACAGTCTTATCTTGGCATTCTTCTTC
CACCTTTTGAAATGGTAGATTTTTCGGCAACGGGAGACAATTCTCTTTGT
GTGATAATGGAGATAAAGGATCGTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002391XLOC_002391Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004311-exon-sc0000041-1575043694:825882..825909TCONS_00004311-exon-sc0000041-1575043694:825882..825909Clytia hemisphaericaexon
TCONS_00004311-exon-sc0000041-1575043694:825483..825629TCONS_00004311-exon-sc0000041-1575043694:825483..825629Clytia hemisphaericaexon
TCONS_00004311-exon-sc0000041-1510915933:825882..825909TCONS_00004311-exon-sc0000041-1510915933:825882..825909Clytia hemisphaericaexon
TCONS_00004311-exon-sc0000041-1510915933:825483..825629TCONS_00004311-exon-sc0000041-1510915933:825483..825629Clytia hemisphaericaexon
TCONS_00004311-exon-sc0000041-1491911889:825882..825909TCONS_00004311-exon-sc0000041-1491911889:825882..825909Clytia hemisphaericaexon
TCONS_00004311-exon-sc0000041-1491911889:825483..825629TCONS_00004311-exon-sc0000041-1491911889:825483..825629Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:825483..825909 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004311 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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