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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004291 ID=TCONS_00004291|Name=TCONS_00004291|organism=Clytia hemisphaerica|type=transcript|length=904bp
TTCGACTTCGCCCGTGGACGAAATTGTAGAAGAAATTTTCTCACTTTTCA
ACGCAAACTTCGAATGGAGCACAATGATGCTGACGGTTGCCCTGGCGACA
ATTTACTCTTGTGTTTTGATTGATTGGAGCAACGAATATGAAAAATGATG
TAAGAATACACACACGTGATGACGACATTGGAAACCAATAGTAACGAGAA
TAACACGATCAAGAACAGGTTGAAATTGTAGCGAATCGTAAGAGCTGGTA
GCACGCTCAATAACCAAACAATAATTGAGGTTGCAATAACGAATTTCGGA
TTAATCTCCTTATATTTGAATGGAAATTTCACTGCAATGAATCTCTCCAA
GGTTAGCATGCCAATGTGAATTAATGACGTAATCAAACCAAAACCAATCA
TGTAAGCGCCTGCCCAAAGTTCCTGACCGTTAACATAACATGCAGAATCT
GCTAAGACACCGACTCCTAATAAGACGTTTGCGACACAAAGACTTGTCAG
AATCATTTCATTCCGTTTGGCGCCTGtagaatacttttgatgattctGCA
TCTTTTTACGTTGCTTAGTAACGATGAATATGAGGGCCATTATGTTGAGG
ATGACGACACAGGAGGCTGTTATGAACATGAGGATGACGCAAGCTTTGTA
GCCATCCTTCGTCTGGTGGAAGGAGACCAATGACATTTCTGGCAAGTCTT
TTTTGTTCATTTAAGGCTctgtttttattactttttcctattgataaaaa
ttttttgaaacacgCAGAAGTTAAAACCATTGagtttgagtttaaagcct
gacgggctagagtagaatctctaacctttctaagacaaaaaaaaagtaaa
gtcacttatttcccatccagaaacTCGCCCTTCGTGATTGGAAGTCAATA
AAAC Run BLAST on NCBI transcript from alignment at sc0000041:411576..412791- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004291 ID=TCONS_00004291|Name=TCONS_00004291|organism=Clytia hemisphaerica|type=transcript|length=1216bp|location=Sequence derived from alignment at sc0000041:411576..412791- (Clytia hemisphaerica)
TTCGACTTCGCCCGTGGACGAAATTGTAGAAGAAATTTTCTCACTTTTCA
ACGCAAACTTCGAATGGAGATAAGTGAACTTCTTGTGAATCCGCTCACGG
AAAATATAAATCATAGGGTCCGCAAGCGACCGAGAAATCAAAAGTATGAA
TAACAAAGACCCAATTACACTACCACTGTAAGGTGTAAATGATTGTTCGT
AGTGTGTCAAGTACCATATGACGGAAGGCATCNTACACTACCACTGTAAG
GTGTAAATGATTGTTCGTAGTGTGTCAGGTACCATATGACGGAAGGCATG
GTACTCACCACGTATGAGATCACGATACTGAAACAAAAAGCCGTCACTTT
ATTCTGCTGTTCTTTTTGTTCCTTAGAATACCACAATGATGCTGACGGTT
GCCCTGGCGACAATTTACTCTTGTGTTTTGATTGATTGGAGCAACGAATA
TGAAAAATGATGTAAGAATACACACACGTGATGACGACATTGGAAACCAA
TAGTAACGAGAATAACACGATCAAGAACAGGTTGAAATTGTAGCGAATCG
TAAGAGCTGGTAGCACGCTCAATAACCAAACAATAATTGAGGTTGCAATA
ACGAATTTCGGATTAATCTCCTTATATTTGAATGGAAATTTCACTGCAAT
GAATCTCTCCAAGGTTAGCATGCCAATGTGAATTAATGACGTAATCAAAC
CAAAACCAATCATGTAAGCGCCTGCCCAAAGTTCCTGACCGTTAACATAA
CATGCAGAATCTGCTAAGACACCGACTCCTAATAAGACGTTTGCGACACA
AAGACTTGTCAGAATCATTTCATTCCGTTTGGCGCCTGTAGAATACTTTT
GATGATTCTGCATCTTTTTACGTTGCTTAGTAACGATGAATATGAGGGCC
ATTATGTTGAGGATGACGACACAGGAGGCTGTTATGAACATGAGGATGAC
GCAAGCTTTGTAGCCATCCTTCGTCTGGTGGAAGGAGACCAATGACATTT
CTGGCAAGTCTTTTTTGTTCATTTAAGGCTCTGTTTTTATTACTTTTTCC
TATTGATAAAAATTTTTTGAAACACGCAGAAGTTAAAACCATTGAGTTTG
AGTTTAAAGCCTGACGGGCTAGAGTAGAATCTCTAACCTTTCTAAGACAA
AAAAAAAGTAAAGTCACTTATTTCCCATCCAGAAACTCGCCCTTCGTGAT
TGGAAGTCAATAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004291-exon-sc0000041-1575043694:412723..412791 | TCONS_00004291-exon-sc0000041-1575043694:412723..412791 | Clytia hemisphaerica | exon |
| TCONS_00004291-exon-sc0000041-1575043694:411576..412410 | TCONS_00004291-exon-sc0000041-1575043694:411576..412410 | Clytia hemisphaerica | exon |
| TCONS_00004291-exon-sc0000041-1510915933:412723..412791 | TCONS_00004291-exon-sc0000041-1510915933:412723..412791 | Clytia hemisphaerica | exon |
| TCONS_00004291-exon-sc0000041-1510915933:411576..412410 | TCONS_00004291-exon-sc0000041-1510915933:411576..412410 | Clytia hemisphaerica | exon |
| TCONS_00004291-exon-sc0000041-1491911889:412723..412791 | TCONS_00004291-exon-sc0000041-1491911889:412723..412791 | Clytia hemisphaerica | exon |
| TCONS_00004291-exon-sc0000041-1491911889:411576..412410 | TCONS_00004291-exon-sc0000041-1491911889:411576..412410 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041 | supercontig | sc0000041:411576..412791 - |
Blast
The following BLAST results are available for this feature:
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