TCONS_00004268 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004268
Unique NameTCONS_00004268
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1493

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004268 ID=TCONS_00004268|Name=TCONS_00004268|organism=Clytia hemisphaerica|type=transcript|length=1493bp
ATTGTAACAAATACAGCTTATCTTTCCAAAACTTCACTAGCTCATCGACA
ttgaagtctttttttttgggcATTGATTAGTCTATTAtatgaaaattttg
agattATACCAAGTTGAGCAAACGTATTTCATGTTACCTCTTTTTCTGAC
ATTTATCATATATTTCTAAGTTGAAGCCGACTAAATAGACTCAAATCGAA
CCACCTAAGCCCTCCCTTTTCCCATCCAAGAAGGAACATCGCGCTATCAA
ATATTGGTCCGCGAAAGAACCGCGAAGAGTGAATAAACGAATACTGGCGG
ATTTCGGCGGTTTTAAACCCGCCTTGGTACACCGCCCGTATTCGATGATA
ACTAGAAGCCATAAATCTGTTCCACAAACACAAGTCGATCTTTTTAATAC
TGAGATTCTCCAAAATGGCGACTCAAATCAGCAAGAAGAGAAAGTTCGTT
GCCGATGGTGTTTTCAAGGCTGAATTAAACGAATTCCTCAAGCGGGAACT
TGCTGAAGATGGTTACAGTGGTGTCGAAGTTAGGGTCACTCCATTGAGAA
CTGAAATTATTATCCTCGCAACCAGAACTCAAAATGTCTTAGGAGAGAAA
GGACGAAGAATCCGAGAATTAACATCTGTTGTCCAAAAGAGATTTAACTT
CCCTGATGACAGTGTTGAGctTTACGCTGAAAAGGTGACATTCCGTGGAT
TGTGCGCAATTGCTCAGTGTGAATCTCTCAGATACAAACTTCTGGCTGGT
GCTCCAGTACGAAAAGCTTGCTATGGTGTTGTTCGATTCATCATGGAAAG
TGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTCAAA
GAGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGTTTC
CCAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAGACA
AGGTGTATTGGGAATTAAAGTAAAGATTATGTTNGTCCAATatttcttgt
ccagaagatttaaaCATCATTGTTTGCAGTATCTCATAAAATATCACCCT
AGTAATGTTGCTTAGTTATTTAAGAATCAACAAGTTAGGCTGTTAGTGTG
CACAAATATAGAGACTTCAAAcccccactgagattttttgaggtcataaa
ctagacctactaaggaagcattactgaaagtttcaaaaaaatttgtaggg
CNGAGCCCAAAGAAGAAATCTTACCTTCTGGTCCAACATCTGAACAAGTT
GGTGGTAAACCAGATGTTGCTGCAGCTGCTGCCCCACCACAGacacaaca
gcaacaacaacaaccaactCAACCACCTCAACAACCAGCACCTGTGGCTT
AGATATCGCCTGACCAATGGAAGTCGTCTAAGGACATACATCGCCTTATC
AACCAGACTGGATTTCGTAAAAGACCCTCCCCGACAACAACTCCTGACCA
TCTCAtactttcaatgaaaaatatttgaaagaacaAAGTTCAC
Run BLAST on NCBI

protein sequence of TCONS_00004268-protein

>TCONS_00004268-protein ID=TCONS_00004268-protein|Name=TCONS_00004268-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
MATQISKKRKFVADGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIII
LATRTQNVLGEKGRRIRELTSVVQKRFNFPDDSVELYAEKVTFRGLCAIA
QCESLRYKLLAGAPVRKACYGVVRFIMESGAKGCEVVVSGKLRGQRAKSM
KFTDGFMIHSGFPIEEYIDVAIRHVYLRQGVLGIKVKIMXVQYFLSRRFK
HHCLQYLIKYHPSNVA
Run BLAST on NCBI

transcript from alignment at sc0000041:177815..196257-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004268 ID=TCONS_00004268|Name=TCONS_00004268|organism=Clytia hemisphaerica|type=transcript|length=18443bp|location=Sequence derived from alignment at sc0000041:177815..196257- (Clytia hemisphaerica)
ATTGTAACAAATACAGCTTATCTTTCCAAAACTTCACTAGCTCATCGACA
TTGAAGTCTTTTTTTTTGGGCATTGATTAGTCTATTATATGAAAATTTTG
AGATTATACCAAGTTGAGCAAACGTATTTCATGTTACCTCTTTTTCTGAC
ATTTATCATATATTTCTAAGTTGAAGCCGACTAAATAGACTCAAATCGAA
CCACCTAAGCCCTCCCTTTTCCCATCCAAGAAGGAACATCGCGCTATCAA
ATATTGGTCCGCGAAAGAACCGCGAAGAGTGAATAAACGAATACTGGCGG
ATTTCGGCGGTTTTAAACCCGCCTTGGTACACCGCCCGTATTCGATGATA
ACTAGAAGCCATAAATCTGTTCCACAAACACAAGTCGATCTTTTTAATAC
TGAGATTCTCCAAAATGGCGACTCAAATCAGCAAGAAGAGAAAGGTAATC
TTGAAAGTTTCAAGATATTCGACTCTATGATACGTTGCTTGGGGAATTGA
TGTTCATTTTTTGGATCTAGAATAGTTGTTGTATTGAAAAATCATACGTA
TAACTAGAACAATAGATGGATGCTAGAGATATGTACAGATATTAACCAAA
CTCTGTTTTCGGTTTATTTCTTAGTTCGTTGCCGATGGTGTTTTCAAGGC
TGAATTAAACGAATTCCTCAAGCGGGAACTTGCTGAAGATGGTTACAGTG
GTGTCGAAGTTAGGGTCACTCCATTGAGAACTGAAATTATTATCCTCGCA
ACCAGAACTCAAAATGTCTTAGGAGAGAAAGGACGAAGAATCCGAGAATT
AACATCTGTTGTCCAAAAGAGATTTAACTTCCCTGATGACAGTGTTGAGG
TAGACAAGTTACTTCAATTTACATTAACTGTTTTAAATTGGTATTTGTAG
TATAGCCATTCCGGGTTTGCTTGTTTTTTATTTGACGCTCATGAAAATCT
TCAATTTTAGGTCCAACTTTGACAAGCAATTGTTCTTTGTGTAGTTGAGC
TGTTTTAAATTGGCATTTGTAGTGTAGAGGTTTCCGATTGTTAGGGTGAA
ATGCCAATAGCGCTCCGCTACGCATACGTCATGATTATTACTTTTCACTT
TTTTGACATTTGTACGAGTTGCAATCCCACAATTCAACGCGGCTCAATTA
AAGATACATGCAAGCTGTTATATATCTTTTGTCAAACGATGCAATTAACG
TGCAAAAGAGATAAGCGCAAAGGTTGATGGGATTGGAACTCGTACAAACA
CATCGAGAGTAATGATTATGTCAAAAATAAAATCTATTTTTAGATTCAGC
GCGGTGCGCTATTGTATGCACTTTCTTTCTTGGATTTTATTTAACTTTTT
GTCTTTCCTGTAAGTTACTTTTCTCAGGTTTGCATAGAATAAGATGCACT
CCACTGCTCCTTGATTATCGAAGTAATCGATAATGATTGAAGTAATCGAA
CGACCACTCATCGATTAACAATCAAATTTCAAGCACCAAAATTTCAAAAG
CATTGCTCTCAGGGTGCATAATATAGGGTTGAGCATTAAAACTGAAATTT
TCCCCACACAGTTGCGCGTGTTTAATCACCGTTTTTGTATATTTTCATTT
AACATTATTGATAACAATGCCCACCATCAAACATGATTGAATTGTCGTAC
TTACTAAAACGTGAAACGCCCAGCAAACAAGGGGAAACAACAGAGAAACG
GGTGGAAACGCCTAGGAAACAATTAGGAAACGAGGAAAATCGGGAGACTA
AACTGAAAAGTATAGACCCGTTGCATGTGACGTCACATGTTTACATCGGC
TCGTTACGACCCGCAAAACGGCCCGACTTTCAGAGACAAAAAAGACAACA
ACATTAGCTGGAGGCACGCAGTTTATGTCAATTTTCTCAGGATCTAGAAG
GAATTTTGATTAGAAATTTTAGTATGTTATCTAATAACTATATAGGATTC
TTATACTAAAATTTCATGAAATTCTGATGAAGAGATTTTGAATAATAAAA
TCAAAACTGCCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTAAAATCAAAACTGCCTTTTTCCAGCAAGCGCTTCGTGTT
TTCTGCCTCTGAAAAACCGTAACTATTTTGGCGCATGCGCATACAAACGC
GAAAAATCAAAACATTGCAACAGGTCTATGAAAGTATTAGGCTGCATGCA
TCCCCAAATTAGTTTTGATATAGGGGATGCGAATCGGGCTCTGATATCGC
TTCCGAGAAAATTACCGAATAGCTATGTATTTTGCAGAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGTTTGAGTTATTT
GATGACGTAAATAGAAATCAAATAAAGATTCAAATAAAAAGAACATATGG
CTAGAAATCTCTCTTTCTCCTCTATTTTTTTTTGTTTATCGAAATTAATT
GAATTAGCAAACAAAACTCTCAAGATAACAAAAGACGACAAACTGTCAAT
CAAAGTTCTCTATCATTCAACTCTTTTTTTATTTAGCAGATTTTTTGCTA
AGTTCGGAAGCGTTTTGTGAGCCTGATTCGCATCCCCTATATCAAAACTT
ATCAGAGGGGATGTGTGCAGCCTAGAAAAGTATTGGAAACTAAGTCTTTT
TCCGTCTGGAAATCGAAGGGATAGGTTGATTTGCCAATATTGGGTAGCTT
TTTCAATTTAGAAGATCGTTACTTAAGACAATTATATTCAGCTGGAGGTA
ACTTCAAATTCTGGGTGCAAATTATCCTGCAGGATAACAGGACCACAGCT
CCAAATTCATTAATAATTTATCTTTGAAAACTTGAAGTCTGATACTTAGG
GTAGGCAATTTCTTAGCTTTAATCACTCCCTGCACTTCATCTGTATCATA
CGTTAAAGCATTGGGCTCTTTCAGAAAAATTTGATATAGGGGGTGGACAA
TAGGAGTTTTCAGATAAAAAAACACTGAAATCCAGTCAATTTTTTATTTG
AACCCTTGGAAATTCCACATAATTTGTCAAAATTTTAAAAAAAGTATTGG
AAATTCCAGATTTTTCCATCAAAAAATTGATTTTGTATTGGAAATCCAGG
AATTTCAAAAACATTTTGTTTCGGAATTCCGCCGTCGTCCACCCCCTGTA
ACAGACTTTGACTGGAAGAGCCCATTATGATAGGAAAGAAACGAATAAGA
ATTTGTTGGGTACGAAATATTTCATCAACTGTTATGTTTTCAAAGCCATG
AGAAGACTGATTTGGTTATACTGACGTTGTTACATCGACCATGCAGTAAT
TTTTACTGTTTCTATCCGTTTCAAACCAAGTCCTACAATGGCTTTGTCTT
GATCAATTTTGTTTTTTTGCTTGTCTTATGGTCAATGGGGTACACACAGG
TACAGAAATATCAGACAGCTGACATGCGAGAGGCTCTTCAACCACTTATA
TTCTAACCGTTTCCCTGTAGTTTCCCTGCGGTTTCCTGTGCATTTCACGT
TTTAGTAAGTACGTTCAATTGTCAATAAAACTGTTTTTTGAAGCCACAAT
GCCTAAAATATGACCGATCCTAATTTTCAAGGACAATTTTTTCTGACCGA
AAGTGACGGAAATATGTCAAAAATCACTGTTTTACTACATTTTCATTGGA
TTTTTTCGTTTTATATCGTTTGTTCATCAAACAAAAACATTATTTATAAG
AATGCACACCATGAAAATATATGTATCAAAGCTCTACCCAGTGTATCGAG
CACTGTTTCAACATTTGTTTTCAACAATGGTAAGAATGCACACCATTAAA
CATGGTTGAATTTTAGATTAAACTGGTTAACAAAAAAATATCCCTTGGAA
ACCAGTTTAACCCCTGGAAAGTGAAATTTTGTGAAAAGGCTAGTTTATGA
GGAGAGAACCCCCTTGGAAAATCCTGAAAAATGAACAAAAATCATTGGAA
AATCAAGGCTCACCCCCCCCCCCCCCTGGAAAAGATATTTAATACCAATA
GTGTGGAAAAACTCTCCCTTTGCTTATTTAAAACATCTCCAAACAGCTGA
TTGGTTGGTTGGTTGTAAATATTCTCAGTTTTTGAGGGAAATATTGAATC
CTGTCAGTAAAAATAGAATCCATTGCCAGCCTTTTAAATTACCTTTTAGC
CTCTACTGCTAAACCAAATCCAGTTCAATACATTGAAAGCATTCAGGGCT
GCAAATAAATAGTTTTAGTAAATAGCCTTGAGTTTTGTTGGTGCATTGAA
AAAACTTGAATAGGACCTGATATGGGTAAAGTAGAGAGAAATATCTGCAA
GATTAACCATTCTTTTGAGTTCACAGGCTGTTTCTTTAACACTTTTCTTT
TTTAGCTTTACGCTGAAAAGGTGACATTCCGTGGATTGTGCGCAATTGCT
CAGTGTGAATCTCTCAGATACAAACTTCTGGCTGGTGCTCCAGTACGAAA
GTAAGTACCACAGAATACCTGAGTGTCAACTTAATTGAGTTGCTGTTGCT
ACTTAATAGTTATCACACAGTACAGGGTACAATATGGCAGGCCAATCTCG
CACTTATTTCTACCATATGTGTAGATATGTAAAAATCGTAAATCTACCAT
ATGTGTAGATATTAGAATCCGTAAATCTACTATATGTGTAGATATTGTAA
ATCTACCATATGTGTAGATATGTAAAAATCCATAAATCTACCATAAGTAG
TTAAGGTATATTTACTATCCAGACAATCTAAAAAGAATGACAAATAACTA
TTAAAAAGCGACAAAAAGAACGACAAACCTTAACCCTAACTATCAAAGAA
CGACATATTTCAAACCCTAACCCTAACTATCAAAGAACGAACTATCAAAG
AACGACATATTTCAAACCCTAACCCTAACTATCAAAGAACGAAACGACAT
ATTTTGCCGTCCACAACCCCGACCGAAAGTGACTGTACCACCCCTAGCGA
TTCATTCCTCATTTCATTATTCATCACGGGAATTAACTGCGTGTGGTTTA
TAAATTACGCATGCGCATAAGTCTTTATGTTAGAGCATTTACCGTATCTA
CACATATGGTAGATTTACAATATCTACACATATAGTAGATTTACGGGTTC
TAATATGGTAGATTTACAATATCTACACATATGGTAGATTTACGATTTTT
ACATATCTACACATATGGTAGAAATAAGTGTGAGGATGTGTTGAATATGG
AATATATTTTTCAAGTTCAGAGTTTTCGTCATGAAATTTCTGAGCATAAA
ATTTACAAATTATGATCTCTCGCTTACCAGACCCCTTATGAGCACGAGTC
TGCTAATGTCACCCATTTTCGGTTTTGTCAACTTTTCAACTTTAAGGATC
CAGTGAAAAATCTAGGTGCATGCAATAATGATACCAGCTGATGTTTTTTA
TCAGTCTTGATACTGGCAAGCTTAAACAGTCATTTTTTTCACTTTACAAA
GTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAT
TAATAAAAAAATTATCCAGGAATAAAAGTGAAATTCAAAACTTTATTTTT
TCCAAATTTTTTCACCTATTTGGGTGACATTACCAGACTCATGCTCTTAT
GCTGAATGTGGTTTTGTATTTTTGTGTTACAATATGAAATATAGCATTTC
TGTTCACCTTTTTAGCCAATCAGATCGCTCATATTTTTTATGTTGACGAT
ATAATTTTAATCTTCTAGAACTCAAGGAGCTGGGAGCTGGTATTTATTAA
CTTTGTCTGGGTTTGCTTTCTTTTATNTCAGAAAAGGTGTTTCAGGTAAA
AGTGTTTTCATAGTTTTCGGGACTTTTTTGACATGAAAGGTTCAGGCTGA
TTATAAGTAGTTGTGTATTATGTAATCAATAATGAAACCTTAAACTTCTT
AAACTTTGTTAGAGCTTGCTATGGTGTTGTTCGATTCATCATGGAAAGTG
GAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTCAAAGA
GCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGTTTCCC
AATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAGACAAG
GTAAGATTCTTAAAACTTGGGGTCTAACCACCACAAAAGCTTATCTAAAA
TAGCATTGTTTTGTACAAGAAATCAGAAGTATCCTTTAAAGTTCTTTGTT
TAAATAACGTTTAGACATTGAGTACCTTATTGGTATTATATTTCGCGGGT
ACTTAATTTTGCAATTTTTTAGGCCAAATTTCGCGAAATTTAATACCGTT
AAATTTTTCAAAAATACAAAATCGCAAAATTAAGTACACACAAAATTTTC
AAAATAGGTCGAAAATCGAAAATACTTATTTGTTACACTTAGTTACTATT
TTTGTCACTAGTTTTGTTACTATTTTCGCCCTACAATTAGAAAAGTTGCG
TTGTATGTATGCTCATAATCTCATATATCGTGCATTTTTAATGAGCTCTT
TTATGCATTGGTGAAATCTTATTGGCTCATTGAAGCTTTAAAAATTAGTT
GAGACGAGATTCATTGTTTCTGACATCAGTGTAAGAAAATATTTGGACTA
AAGGCCTGTAAACTTGGCAATCCCTCATCAAATAATAGGATTTTTCGATC
AATGTTTTCTTTTAGGTGAACTCTATTGCTTGATACTTTCCTTCAAAATT
CTCCAGCAAATTTATGTCCACAAATTGAGTCTGAAATTGTGCGTGCTTTT
AAAGAACTTTTCATTTTCTGGCTTGAGAAAATATATTTTCAAAACAAAAT
TGAACGAATTACGAAATGGAACATAAACTTGTGTCGTGGACGAAGTTTTA
TTTAATTTTCGTATATTAAAAGGCTAGAATCTTCAATACTGATAATTACT
TTAGGCGTAGAAACTTTCGCGAGCAGAAACTTTCACGATTTTCGCGAATT
TTGGCCCTTTTCGCGAAAGTAAATGTCTTAAAAAATTCTAGGAAGGGCCA
TTCGCGAAAGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATATTTTTCCGTTAAATTCGCGAAAGTAAATGTCGTGAATTTC
GCGATTTTTCGTCCTCGCGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCT
AAAGTAGAATGTTTAGAGCAAACTTGAGTTCCACTAAAGTCTTATTTCAT
CGGGCGACCTTAGAATTTCTTTTGATACATTTTATAAAAGAAATCAAAAG
ACTTTAACGACCAATTACCAACACATTCAACTCCTGTTTTTCTTTATACC
TCCATGTTTGCACTCAGTACCCCCAAAGTACTAAGTGCATTTGACTACTT
GCCAGGCTGGCACCACCCAGCAACACCCCCTCTTCTGCCCTGTTTAGTGG
TCTTGAGTGGCCAAAACTCAAGGTAATCACTATTTGAAACCTGTTAATAC
CCTAGGCAGCCTTGGGGTTGACACTAACCTTGGTAATTTTTCTCTATTTG
ATTTATAATAAACTCAAAGCCTAACATATGATACAAAGCTACAAGACCCA
ACGTTTAAAGTCAAGTCTGCCCAACATTATTTAGGTCTAAAACCCCAGAA
ATAAAAAAATATCACTTTTGCATTGTTTGACGAAAGACTGGGAGAAAAGC
TTGAGAAGACATTGTAGTGATCAGGGGGGGTACCAAGTCAGTGTACTGGC
CCATAGCTGGTGGGGTGGTGTATTTTTTAGGTTAAATTGAGTTAGTACAG
TGTACTAAAAGGGTAGTCCTCTGAGAAAAATACATTGAAAAAGTTAGTAC
ACTGTACTAAAAAGGGTGGTGTTCTGAATTGATATACAGTGAGAAGTTAG
TACATTGTACTAATTTCAGTGGTAAAAACACTCAAACCCAGAGAATTCCC
ATGTATATTTGCCCTAATTTTCCAGGTCCAAGCTGGTCTGAGACTTTCAA
GTCAAGGCTGGTTAACCTTTTCAGCCCGGCGGACGAGTATAGTCGTCGAG
CATACGTTCCGGCAGACGAGTATAGTCGTTTTTTTGACATAGTGATCTTC
TAAGCTATATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTTTTTCTAAAGATTCC
TAGTTCTTGAGTTATGATCAAATAACTGAACATGTCTATTTTCTGAAAAA
ATGTTGCGCGCTGACAGCGTGAAAATTTAAAAAATTGCGCGCTGGAAAGG
TTAAGCTATACAAATTAGTACACTGATTTTCTCCCAATGTTTCCTGTTTA
CTTGATTAGATTAGTTTCAGTGTCGCGGCGTACACAAGTGGAGACCGGCC
TTATGTCCAATCTTGTTTACATTTTCTTTAAAGCCCTATCTACATTATGG
CAACAAAAGAATTCGAATGTACGTAAACGTTCAAATCGAAGCTTTAAAGT
CTCTTGTTTTTCTTTTTCAAAAAAGAAAAACTGCTACAGTTTGCCAGACA
ACCAGAAATCAAGTCATAGAAAGGAAAATAACTCAAAGTTGGTTTTGAGT
GTTTTGACGTGCTAATTTCAGCTAATTTCACTGTATTCGAATGACTTTGT
CTGTTTCATTGTTTTAATGTTTGTACTACAAGGATTCAAACATTTTAATA
CTCAAATCTTTCCTTTTATATAATTTGGTGTTTTTCTTAACAAAATGGTT
AAAACCTTTGAATATGGTGGCAATTAAACTTATCTGGCCAAGAAGAAATT
AGATCAGTGCGCTGTAAGGGGTGGTTTCTAAACTTATCTGATAAAACAAA
ACAGCTAGTAAAGTGTGCTAAAAGGGTGGTATCAAAAATCCGGTCATGGA
GAAAAGTCAGTACAGTGTACTTAAAGGGTGGTGTCAAAGCCCCGGCCGTG
GAAGAAAGTTAGTACAATATACTAAAAGGGTGGTATCAAAAATCCGGTCA
TGGAGAAAAGTCAGTACAATGTACTAAAAGGGTGGTGTCAAAGCCCCAGC
CGTGGAAAAAAGTTAGTACAGTGTACTAAAAGGGTGGTATCAAAAATCTG
GTCATGGAGAAAAGTTGGTACAGTGTACTAAAAGGGTGGTGTCAAAGCCC
CGACCGTGGAAGATAGTTAGTACAGTGTACTAAAAAGGGTGGTGGTCTAA
TTTTTTGGAAAAAAATCCAAAAATCAAGTTAGTACCCTATGGTCCAGTAC
ACTGACTTGGTACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTGTCAAAATATTGGTTGATCTTCTCCA
GCCAACTAATCATTGGCATTAAGGGAACAACTGTAAAAAAATTCAGGTCA
TTTCCATTAACAGATGACATTTTATGAATGTTTCTTTATTTTTAAGTATA
GAATATGTAAAAAAATGAGACTGACATCTGGCCTTTCCTGNAGGGTAAGA
CCAGCCTTTTTTACACTTGGTACCCTAAAGGTACCATTTGATCGACCTGA
AATTTATAGCACACCACCCCTCGTAGCAGTTAGTACCCTAGAAGTACCAT
TTGATTAAGTTAAATTTCATATTACACTACCCTTTACAGCAGTTAGTACC
CACAACGTACTAACTGCAAATTCCAAAAATCAAATATGACCCACCACGGT
ACTAACCGTCATGATGTCTGGTACCAACTGCATGACTCCCCCTCCCCCCT
GAGTACTAACGCTAAATCTACAAAAAAAATAGAGAAGAGAAACATTTCTA
CTGTTGGGATCGTGACAATTATTTAAACGAAAAAATATCTTTTGAATACT
ATCCTCAAGAGCAGTCTAGCGAATTGTTTATTTTGCTTCCTTCAGGTGTA
TTGGGAATTAAAGTAAAGATTATGTTNGTCCAATATTTCTTGTCCAGAAG
ATTTAAACATCATTGTTTGCAGTATCTCATAAAATATCACCCTAGTAATG
TTGCTTAGTTATTTAAGAATCAACAAGTTAGGCTGTTAGTGTGCACAAAT
ATAGAGACTTCAAACCCCCACTGAGATTTTTTGAGGTCATAAACTAGACC
TACTAAGGAAGCATTACTGAAAGTTTCAAAAAAATTTGTAGGGCNGAGCC
CAAAGAAGAAATCTTACCTTCTGGTCCAACATCTGAACAAGTTGGTGGTA
AACCAGATGTTGCTGCAGCTGCTGCCCCACCACAGACACAACAGCAACAA
CAACAACCAACTCAACCACCTCAACAACCAGCACCTGTGTGAGTGTACCT
AATTAACTTTGGTTACATGTAGGAAAATTTTGGGACCCTCTAACGAGAGT
GAACTAACTGGGTAATCAAAGTTAAGAGCCATTTTTTTTAAGAGTCTTCA
GGGTGTGATACCTCATCATCTTGGATTTTGATGAAATTTTGACCAAATGA
TCCATCACACAAGAAAATAAGACCCTGAAAATTTCACCTTGATATCTCAC
GTAGTTTTGAAGATACAGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCAGAGAAATTTTTGGAGGCAGGGTGGGGAAAAATGAGGGGGGGAATGG
AAAATTTTCATTCTAGGCATGGGGGGGAAGAGACCCTGAAGGACACTATG
AATCTATTGATACATGTTTTGACAAATGATATTTTTCTCTTTCAGGGCTT
AGATATCGCCTGACCAATGGAAGTCGTCTAAGGACATACATCGCCTTATC
AACCAGACTGGATTTCGTAAAAGACCCTCCCCGACAACAACTCCTGACCA
TCTCATACTTTCAATGAAAAATATTTGAAAGAACAAAGTTCAC

Coding sequence (CDS) from alignment at sc0000041:177815..196257-

>TCONS_00004268 ID=TCONS_00004268|Name=TCONS_00004268|organism=Clytia hemisphaerica|type=CDS|length=3255bp|location=Sequence derived from alignment at sc0000041:177815..196257- (Clytia hemisphaerica)
GTGTATTGGGAATTAAAGTAAAGATTATGTTNGTCCAATATTTCTTGTCC
AGAAGATTTAAACATCATTGTTTGCAGTATCTCATAAAATATCACCCTAG
TAATGTTGCTTAGAGCTTGCTATGGTGTTGTTCGATTCATCATGGAAAGT
GGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTCAAAG
AGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGTTTCC
CAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAGACAA
GCTTTACGCTGAAAAGGTGACATTCCGTGGATTGTGCGCAATTGCTCAGT
GTGAATCTCTCAGATACAAACTTCTGGCTGGTGCTCCAGTACGAAATTCG
TTGCCGATGGTGTTTTCAAGGCTGAATTAAACGAATTCCTCAAGCGGGAA
CTTGCTGAAGATGGTTACAGTGGTGTCGAAGTTAGGGTCACTCCATTGAG
AACTGAAATTATTATCCTCGCAACCAGAACTCAAAATGTCTTAGGAGAGA
AAGGACGAAGAATCCGAGAATTAACATCTGTTGTCCAAAAGAGATTTAAC
TTCCCTGATGACAGTGTTGAGATGGCGACTCAAATCAGCAAGAAGAGAAA
GGTGTATTGGGAATTAAAGTAAAGATTATGTTNGTCCAATATTTCTTGTC
CAGAAGATTTAAACATCATTGTTTGCAGTATCTCATAAAATATCACCCTA
GTAATGTTGCTTAGAGCTTGCTATGGTGTTGTTCGATTCATCATGGAAAG
TGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTCAAA
GAGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGTTTC
CCAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAGACA
AGCTTTACGCTGAAAAGGTGACATTCCGTGGATTGTGCGCAATTGCTCAG
TGTGAATCTCTCAGATACAAACTTCTGGCTGGTGCTCCAGTACGAAATTC
GTTGCCGATGGTGTTTTCAAGGCTGAATTAAACGAATTCCTCAAGCGGGA
ACTTGCTGAAGATGGTTACAGTGGTGTCGAAGTTAGGGTCACTCCATTGA
GAACTGAAATTATTATCCTCGCAACCAGAACTCAAAATGTCTTAGGAGAG
AAAGGACGAAGAATCCGAGAATTAACATCTGTTGTCCAAAAGAGATTTAA
CTTCCCTGATGACAGTGTTGAGATGGCGACTCAAATCAGCAAGAAGAGAA
AGGTGTATTGGGAATTAAAGTAAAGATTATGTTNGTCCAATATTTCTTGT
CCAGAAGATTTAAACATCATTGTTTGCAGTATCTCATAAAATATCACCCT
AGTAATGTTGCTTAGAGCTTGCTATGGTGTTGTTCGATTCATCATGGAAA
GTGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTCAA
AGAGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGTTT
CCCAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAGAC
AAGCTTTACGCTGAAAAGGTGACATTCCGTGGATTGTGCGCAATTGCTCA
GTGTGAATCTCTCAGATACAAACTTCTGGCTGGTGCTCCAGTACGAAATT
CGTTGCCGATGGTGTTTTCAAGGCTGAATTAAACGAATTCCTCAAGCGGG
AACTTGCTGAAGATGGTTACAGTGGTGTCGAAGTTAGGGTCACTCCATTG
AGAACTGAAATTATTATCCTCGCAACCAGAACTCAAAATGTCTTAGGAGA
GAAAGGACGAAGAATCCGAGAATTAACATCTGTTGTCCAAAAGAGATTTA
ACTTCCCTGATGACAGTGTTGAGATGGCGACTCAAATCAGCAAGAAGAGA
AAGGTGTATTGGGAATTAAAGTAAAGATTATGTTNGTCCAATATTTCTTG
TCCAGAAGATTTAAACATCATTGTTTGCAGTATCTCATAAAATATCACCC
TAGTAATGTTGCTTAGAGCTTGCTATGGTGTTGTTCGATTCATCATGGAA
AGTGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTCA
AAGAGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGTT
TCCCAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAGA
CAAGCTTTACGCTGAAAAGGTGACATTCCGTGGATTGTGCGCAATTGCTC
AGTGTGAATCTCTCAGATACAAACTTCTGGCTGGTGCTCCAGTACGAAAT
TCGTTGCCGATGGTGTTTTCAAGGCTGAATTAAACGAATTCCTCAAGCGG
GAACTTGCTGAAGATGGTTACAGTGGTGTCGAAGTTAGGGTCACTCCATT
GAGAACTGAAATTATTATCCTCGCAACCAGAACTCAAAATGTCTTAGGAG
AGAAAGGACGAAGAATCCGAGAATTAACATCTGTTGTCCAAAAGAGATTT
AACTTCCCTGATGACAGTGTTGAGATGGCGACTCAAATCAGCAAGAAGAG
AAAGGTGTATTGGGAATTAAAGTAAAGATTATGTTNGTCCAATATTTCTT
GTCCAGAAGATTTAAACATCATTGTTTGCAGTATCTCATAAAATATCACC
CTAGTAATGTTGCTTAGAGCTTGCTATGGTGTTGTTCGATTCATCATGGA
AAGTGGAGCCAAAGGTTGTGAAGTTGTAGTATCTGGAAAACTTAGAGGTC
AAAGAGCCAAGTCCATGAAATTTACAGATGGATTCATGATTCACAGTGGT
TTCCCAATTGAAGAATACATTGACGTAGCAATTCGTCATGTATACCTCAG
ACAAGCTTTACGCTGAAAAGGTGACATTCCGTGGATTGTGCGCAATTGCT
CAGTGTGAATCTCTCAGATACAAACTTCTGGCTGGTGCTCCAGTACGAAA
TTCGTTGCCGATGGTGTTTTCAAGGCTGAATTAAACGAATTCCTCAAGCG
GGAACTTGCTGAAGATGGTTACAGTGGTGTCGAAGTTAGGGTCACTCCAT
TGAGAACTGAAATTATTATCCTCGCAACCAGAACTCAAAATGTCTTAGGA
GAGAAAGGACGAAGAATCCGAGAATTAACATCTGTTGTCCAAAAGAGATT
TAACTTCCCTGATGACAGTGTTGAGATGGCGACTCAAATCAGCAAGAAGA
GAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002370XLOC_002370Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004268-exon-sc0000041-1575043694:195814..196257TCONS_00004268-exon-sc0000041-1575043694:195814..196257Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1575043694:195409..195633TCONS_00004268-exon-sc0000041-1575043694:195409..195633Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1575043694:191658..191752TCONS_00004268-exon-sc0000041-1575043694:191658..191752Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1575043694:188208..188395TCONS_00004268-exon-sc0000041-1575043694:188208..188395Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1575043694:180470..180862TCONS_00004268-exon-sc0000041-1575043694:180470..180862Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1575043694:177815..177962TCONS_00004268-exon-sc0000041-1575043694:177815..177962Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1510915933:195814..196257TCONS_00004268-exon-sc0000041-1510915933:195814..196257Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1510915933:195409..195633TCONS_00004268-exon-sc0000041-1510915933:195409..195633Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1510915933:191658..191752TCONS_00004268-exon-sc0000041-1510915933:191658..191752Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1510915933:188208..188395TCONS_00004268-exon-sc0000041-1510915933:188208..188395Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1510915933:180470..180862TCONS_00004268-exon-sc0000041-1510915933:180470..180862Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1510915933:177815..177962TCONS_00004268-exon-sc0000041-1510915933:177815..177962Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1491911889:195814..196257TCONS_00004268-exon-sc0000041-1491911889:195814..196257Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1491911889:195409..195633TCONS_00004268-exon-sc0000041-1491911889:195409..195633Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1491911889:191658..191752TCONS_00004268-exon-sc0000041-1491911889:191658..191752Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1491911889:188208..188395TCONS_00004268-exon-sc0000041-1491911889:188208..188395Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1491911889:180470..180862TCONS_00004268-exon-sc0000041-1491911889:180470..180862Clytia hemisphaericaexon
TCONS_00004268-exon-sc0000041-1491911889:177815..177962TCONS_00004268-exon-sc0000041-1491911889:177815..177962Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004268-proteinTCONS_00004268-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000041supercontigsc0000041:177815..196257 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1180.49	1209.9	1200.38	1193.75	973.252	805.418	1114.98	1230.09	1792.03	1750.65	2009.43	2213.68	2658.58	2565.8	2136.12	2227.77	2186.31	2378.64	1322.46	1523.85	2406.13	2381.21	1652.93	1685.8	1649.33	1785.13	2166.95	2284.26	1416.55	1513.04
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015946KH_dom-like_a/b
IPR005703Ribosomal_S3_euk/arc
IPR001351Ribosomal_S3_C
IPR004044KH_dom_type_2
IPR018280Ribosomal_S3_CS
IPR009019KH_prok-type
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Blast
[Close]
BLAST of TCONS_00004268 vs. Swiss-Prot (Human)
Match: RS3 (40S ribosomal protein S3 OS=Homo sapiens GN=RPS3 PE=1 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 7.395e-111
Identity = 163/189 (86.24%), Postives = 171/189 (90.48%), Query Frame = 1 
Query:  415 MATQISKKRKFVADGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPDDSVELYAEKVTFRGLCAIAQCESLRYKLLAGAPVRKACYGVVRFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGFMIHSGFPIEEYIDVAIRHVYLRQGVLGIKVKIM 981
            MA QISKKRKFVADG+FKAELNEFL RELAEDGYSGVEVRVTP RTEIIILATRTQNVLGEKGRRIRELT+VVQKRF FP+ SVELYAEKV  RGLCAIAQ ESLRYKLL G  VR+ACYGV+RFIMESGAKGCEVVVSGKLRGQRAKSMKF DG MIHSG P+  Y+D A+RHV LRQGVLGIKVKIM
Sbjct:    1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 189
The following BLAST results are available for this feature:
BLAST of TCONS_00004268 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RS37.395e-11186.2440S ribosomal protein S3 OS=Homo sapiens GN=RPS3 P... [more]
back to top