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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004243 ID=TCONS_00004243|Name=TCONS_00004243|organism=Clytia hemisphaerica|type=transcript|length=1115bp
aaaaaaagttggtattataaaaaaaagttggtattataaaaaaaagttag
tattaaaaagccttttggcgcgccatacccgggcacgcatcaaaaaaacc
ccggactgtccggcgcataggcagggtcgtagttggagcagttgacggta
agtgAATCGTGGGGCAGCCGGATTCTGTGCACTGTGCTCACCACATATCG
CATGCAAGTTAAATGGTATGCCATTTATTGGGGGGGGGCAGACGTCGTGT
GATGTGAGGTTGACTAAGTCTAAGTTTGTGTGAAAGCAGTTGGAAAAGTG
ATGCCAAAATTGACGCCCATGTGATCAGCCAATGTTAAAGTACATCCCCT
GAATGCAACAAGGAAATCCCCGGTGTCCGGGGCAACAGCATCAGCAGGAT
TGGGTTGTTGCGTTGACATccaaataaaatgtgtgtgtgTGGAAAATAAA
AAGTGGTGAGACCAGTCTGGACATTGCGGCTTGTGCGCCGGATATCTCCG
GCGTAGATTTGAGGTTTGAGATCTGCTGCCCTCAACTTTTCCCAGTTAGG
TTGGCGCAGCTCCGGCGTAACATTTCCCTCCTTTCCAGACTGGTGGTGAG
ATCAGTGGGAACCTTTGTAAAATGGATTGCtgtgaaaaaaaacaatcaag
gCTGGGTTTTCATAGTTAGAAGGGTTAGAAAATAACAACATATAATTACG
TGAGGTATGTTAAACGAATTTGAGAAGCGAAGGTGTTTCCTGTTCCAGTG
TGAAAATTTCTTAGTTGCCACAATTCAAATCTTTCGCTACTCAGGCTACC
ATTTTTTAACTGTTCGGCAATTTATCCATCGGTTAGGCAATTTACCCAGG
AAAGAGTTACATCGGATCACCCAAAGTAccctcatgttttttttttattt
tcttatctctgatcctgtctctctcttttctgactgtctgagtttctgag
tttctgagacttagtttctcatttctgactgagttttcatacctgtcaat
catttgtccatcaatttcgaccaacctAATtatcgcaccgagtgggattc
gaaccaccaccaaagaaagaccttcagatttggaagccagcgctctatcc
actgagccatcgccg Run BLAST on NCBI transcript from alignment at sc0000041:397527..398641+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004243 ID=TCONS_00004243|Name=TCONS_00004243|organism=Clytia hemisphaerica|type=transcript|length=1115bp|location=Sequence derived from alignment at sc0000041:397527..398641+ (Clytia hemisphaerica)
aaaaaaagttggtattataaaaaaaagttggtattataaaaaaaagttag
tattaaaaagccttttggcgcgccatacccgggcacgcatcaaaaaaacc
ccggactgtccggcgcataggcagggtcgtagttggagcagttgacggta
agtgAATCGTGGGGCAGCCGGATTCTGTGCACTGTGCTCACCACATATCG
CATGCAAGTTAAATGGTATGCCATTTATTGGGGGGGGGCAGACGTCGTGT
GATGTGAGGTTGACTAAGTCTAAGTTTGTGTGAAAGCAGTTGGAAAAGTG
ATGCCAAAATTGACGCCCATGTGATCAGCCAATGTTAAAGTACATCCCCT
GAATGCAACAAGGAAATCCCCGGTGTCCGGGGCAACAGCATCAGCAGGAT
TGGGTTGTTGCGTTGACATccaaataaaatgtgtgtgtgTGGAAAATAAA
AAGTGGTGAGACCAGTCTGGACATTGCGGCTTGTGCGCCGGATATCTCCG
GCGTAGATTTGAGGTTTGAGATCTGCTGCCCTCAACTTTTCCCAGTTAGG
TTGGCGCAGCTCCGGCGTAACATTTCCCTCCTTTCCAGACTGGTGGTGAG
ATCAGTGGGAACCTTTGTAAAATGGATTGCtgtgaaaaaaaacaatcaag
gCTGGGTTTTCATAGTTAGAAGGGTTAGAAAATAACAACATATAATTACG
TGAGGTATGTTAAACGAATTTGAGAAGCGAAGGTGTTTCCTGTTCCAGTG
TGAAAATTTCTTAGTTGCCACAATTCAAATCTTTCGCTACTCAGGCTACC
ATTTTTTAACTGTTCGGCAATTTATCCATCGGTTAGGCAATTTACCCAGG
AAAGAGTTACATCGGATCACCCAAAGTAccctcatgttttttttttattt
tcttatctctgatcctgtctctctcttttctgactgtctgagtttctgag
tttctgagacttagtttctcatttctgactgagttttcatacctgtcaat
catttgtccatcaatttcgaccaacctAATtatcgcaccgagtgggattc
gaaccaccaccaaagaaagaccttcagatttggaagccagcgctctatcc
actgagccatcgccg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004243-exon-sc0000041-1491911889:397527..398641 | TCONS_00004243-exon-sc0000041-1491911889:397527..398641 | Clytia hemisphaerica | exon |
| TCONS_00004243-exon-sc0000041-1510915933:397527..398641 | TCONS_00004243-exon-sc0000041-1510915933:397527..398641 | Clytia hemisphaerica | exon |
| TCONS_00004243-exon-sc0000041-1575043694:397527..398641 | TCONS_00004243-exon-sc0000041-1575043694:397527..398641 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041 | supercontig | sc0000041:397527..398641 + |
Blast
The following BLAST results are available for this feature:
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