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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004237 ID=TCONS_00004237|Name=TCONS_00004237|organism=Clytia hemisphaerica|type=transcript|length=1681bp
tttttttggacCTCTCTTGGACTCCCGTTGAAACGAAGGGACGAATTAGa
ctacaatagattaaattggCCGCAGACGAAATAAAGTCGCCATTACTCTA
CCTTCTTTCTCGAAGGGGTTTTTCATCTCATGAGAACACTGTGAAGGTTT
GGTACTCAGTCCATGGTTTGGATCGCGTCTGGAATCGAAgcaagtttgtt
tgtttgttgttagATTACTTTCAAGATGTTTTCCACCTGATGAAATATAG
gaatggTTCGCAAGAACAAGAAGATCTCCATCAACGTCAGAGGGACTGTT
TACGAAACGTTCGAAGAAACGCTGCAACGTTTTCCACACACACTCCTCGG
TGATCCCACCTTACGTATCTCGCACTACGACGTCCAACGCAACTCTCTTT
ATTTCGATAACACGTGTGAAGCTTTCGacgccattttgttttattatcaa
TCGAACGGTTGCTTGGTGCGACCGCCCTGGGTTCCCatggaaaaattcga
attcgaatgtttatttttcaaattgggTGAAAACGCGATCAAATCGATGA
AAGAACGTGAAGGTTATGATACgcagaaaaaagtgacggtTAAAAACGAA
CGTAAAACGTGTCGGCGTAAATTGTGGAATTTTCTGGAGAAACCAGAATC
GTCGTTGATGTCGAGATTGTATACTTTCTTATCACTGATGATGGTCTTTT
TCTCCATCACGTTGGACTGTTTTGAAACCACTTTACCGGTACTGCCGAGC
GACTACGACATCATGCAAGATAACTGGGAGAAAACCAAACTTTCTTTGAA
CACTTTTTTCGCTGCCGAATTCATCATCCGATTTTCGGCATGTCCGTACC
GACGGAAATTCTGTAAAGCTTTCTTGAATATTGTTGACTTTTTCGCCATT
TTCCCttcatttttgacgtattttttaGACCGTGAAAACACGCGTAGTAT
AATGTTTGTGCGGGTGTTACGTACGTTACGTGTCTTACGTTTGATACGct
tatcaaaaagttttcaaacgCTCTCCGTTGTACTTCATATATTGGTAAAA
AGTTTGGCAGATTTACTAACGCTCATATTTTGCATGTTAATCTCGTGTAC
AATTTTTGGGAGCATTATATACTATGCAGAACATTTCAGTGAAAGCCCTG
ATCAACGAACTTCGCAAATATCCAGTATACCTGAAGGAATGTATTTTGCC
ATGCAAACAGTTGTCTCTATTGGTTACGGAGATATTGTCCCATCTTCGTT
TGCTGGTAAAATTACTACAGCCATGACGGCTATTGTAGGGGCGTTAACAA
TGACTGTTCCTCTCCTTTCGTTGGGCGGCAAATATTTCGCCACCTACACC
AAGACTTTTGATGTCAATTTGAGCGCCGACCTTATCAACACTCCAGGACC
GAACGTTCAAAACGAAGAAGCGAAGAAGAGAGAACTTAACAAAACTACTA
ATGACttaaaagatatttaaaaaacttattaatttattttatatatATGA
TATATTCTCTATATTTTACaatcaacatttttataaaaaagacaatcaaa
tatttgaaaattgaatcagCGTTGAActcaatttttcaacaaaaaaatag
ttttgctaAAATTCAAGCTTGTCTTTAAAGTGAAATGTACCATTTGTTAG
CACTTATAAAGGTGGTTCAATGCATAGACTT Run BLAST on NCBI transcript from alignment at sc0000041:361480..371047+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004237 ID=TCONS_00004237|Name=TCONS_00004237|organism=Clytia hemisphaerica|type=transcript|length=9568bp|location=Sequence derived from alignment at sc0000041:361480..371047+ (Clytia hemisphaerica)
tttttttggacCTCTCTTGGACTCCCGTTGAAACGAAGGGACGAATTAGa
ctacaatagattaaattggCCGCAGACGAAATAAAGTCGCCATTACTCTA
CCTTCTTTCTCGAAGGGGTTTTTCATCTCATGAGAACACTGTGAAGGTTT
GGTACTCAGTCCATGGTTTGGATCGCGTCTGGAATCGAAgcaagtttgtt
tgtttgttgttagATTACTTTCAAGATGTTTTCCACCTGATGAAATATAG
GTCAGTAAGTTACTTAAAGTGGAGAAAATAATCTTGTAGGGTTGAATTTA
AACCGATAAATNTATACTTCAAGTGGAGAAAATAATCTTGTAGGGTTGAA
TTTAAACCGATAAATAATAGTCGATAAAATATTCTCGATAAATTAATAAC
TTTCTTGCCCTCGTTTTTTCGTGCCAACATCTTTCAAGATGTGCTAAATG
TTTTAGCAAGCAAGAAAAGTTTATGTGTGAAATGCTCATTAAGCCTTCTT
CACTATGAATAAACAACTCTAATGGTTGTATCTTGATATTGGTTTTAAAG
GGACCATTTTGCCTCTTTCTTTCAAGCTGTTTTGTATGAGGTAGAACAAT
AGTCAGCTTTAATATTCGAGCTTAAAGAGGGATAAATTATTGATCAACTC
TCTGTTACATCTAATATCTCCCTCTTCTTCTCTATCATCGCCTCTTTTGT
TCCTCTTATCAATCTATTCTCTTCTTTCTTGAGCTTTTTGGTTTTTCATG
CTTTTTGCTTCATTTAATACAAACTGCTCTTGTATGCCTGGTCCATTCTG
TAGAGGAGAACGAAGGACACGTGGTAAGCGAGCGAGTAAATGAGTAGTTG
ACGATGACTCGACATTTGGACATAAAGAAACAAGCAGCAAAATACCAAGA
TGaagattttctactttttcgatCCCTCAAAAGTACTTTTTACCTGTCGG
TGGATGAATATCGACTCTCGCTCGGAGGTAATTCATGACTTTCTTTCGAT
CTCACAAGGAATTCCTGCTGGTCAGATGTAAAAGTCTTCAACGTTTTTTG
GCCAATGAGAAGTCGTTATTTTCGCGCACTTCGAATTGCTTATTACGCAT
TGCGtggattttgaaatgaaaaatgcaGTGAGCATTTCAACTTAGTACTC
TTGTGAGAGGTatttcaatagacgatatcggcttaacgaaattctccccg
aatgattacccatgatgcattgcgNGCGAGATAAAGTTTTAAGTTTGAGT
TTTGCTTCTCTTGAAGCATCTGCACCACCTCAGTTTCCTTTCTGTGGTAT
TTCTTgcgttttctttctttttcacttttcctTCTGTTtttttgggatga
gctggagtttttacaagatgcttaactgattggttatctttaaacaatag
ggatgacgcgttctttagaaaaagtaataaaatcgaccaacagagtcatc
aaagaacttgtaaaaactccagcttgacccgtttttttactttttgtgtG
GGCGTCTATACCTTTTAATAAAGGCACCCCACAACTCGATAAAggttttt
tatttcttataaaCTACGCCTTTGAGAATTGTTACCTTTGAACCTTTGAA
GAACGTAAATTAGTTGTAGGAATAACTTGATGAAAGCTGGAGCCAAAGGT
TTTCTTGTAGCTTTGGAAAAGCTAGAAGTTGGCTCCAAATGTGATCTCTC
TTTGGATTTTTGAGGTTCAGTCTTTTCTctgatatttatttttttgatgt
ggaaaagaacttttctttcttattttccccagtcGAAAAACACAAATTCC
TTGTTTTTCGTACTCCAGATTCATTCTAATTATGTTTATTAGTGtatcaa
ggaaaagaaaggGAAATTTAACTTTCGTAACATATGGTACATGGTATGTT
CCTGActtcttattttttgtttccGTTACAAAAATAGAAAGACGAGTCCA
TCATCAAAGTTTTTTTGACGAAATTTGAGGAAAGAAAAACAATACGCTAA
TCATAATGCTAAATATTTAGAGGTACAGCACTAGCTGTAGAAGGAGGTTC
TAccctttttgtttgtttttgttgagtTATCACAGTAAGATCTTTGAAAA
GATGTTATCTTCTTCTCATTCTCTCTGCGTATCTCCTCGTTGAGGTTTCT
TCGCCTTGCTCGAAGTAAAGTAAATGCTACCTCTAGTTGTGTTGAAGAGA
GGACGAGAAAGATTTGTTGGTCTGAACTGAAGAAAGAGTGGAATGTTTTC
AAGATGCCAGGTCAGAAAAGCAAGAAGAAAATGATGCCAAATATTTCACG
AATGTTGTACCAAGGTATTCATTTCAAGATTGAATTGGTGCATCTTTTCT
GTTTCACGAAAATCTGTAATTCTATCACCATTAAGAATTCTGATATATAT
GACCGCTTGAACCTTGTTGTGTAGCGGTAAATGGTCTTTGTGTAATGTAC
CTCCAAGTTACGAACACGTAGTTTCTTTCTTATGTGGTTcaatgttttct
tctttttcgtctTTTCTATTGTGTTCGTTACATTTGTAACGTTTGATGTG
TAAATTATTTCCATCCATCATCAATATGTTACCATGGTAACAAGTTCAAT
GAAAGATCTCATACATTGTAAATGTCTCCtctataaaattttgaaaaagt
gaacaTGTGAACTGAAACTTGTcaaaattataaagtttttgaagTTCAAC
ATGGCGTTTAAGAAAGATTGAAGTGTCGAGTAGTCATTGCTGGTGCTTTG
TTTactaaaagaaaaaaggttGGTCGAATTAGCATTTCTTCTTCAAGAAA
GCGGAAACAAACAAAACTTACTTATAACTAAAAGTAAGTTTTGTTTGCTT
CCGTCAATTTGGCATGTTTCCGACCAATGTAGTCCACTTATTATTTTTCT
GTACAATGTTGATATAAAGGTGGCAAAACCTTACTTCAATGATATCTTTT
CTTGGacactttcattttctaatgACACGAGTTTCATTAAAACAACCGTA
CTGTTTATAAAAGAGCGTGAGATTCTAAagtattacacgtttttttttat
aagaacaaactatataagaacatactaggctttggagacttaaaaacatg
caatttcttaagaaattacatcaaaatgctcaaaaaatgctgaaaataag
aacattttaagaacatttttaggctNNAGTATCAAACTTGAACTTGACAT
GAAGCCAATTGAAGTTTGAAATACTATCAGATTAAATACgagtaatgaaa
attttagcatgACTCTATTTGGCCTGTGGATGTACccaacataatttttt
ctctcCATAGATTTGGACTTGGTCTTGAAATTTCACaagtttttctaatt
ttgattacCTTTGTCTTTTCCTTAACACTGCCAAATTATCTTGTCTTATG
AGTACTTGAAATACTTCGAATCATCAACCTTTGTACGAAAATTgccttta
aatttttaaatttagaatttgcgttcaaaagacAATCTGCTAATCTTCAG
AGATCTtgactttcatttcatcatggatattcttaactttttgggaaaaa
tcatctTAAAACAATCTTACGGTATTtttaggttaggatccaaatTCAAC
CACACACCTGACGAACAAAATGACATTATTGTAAAAGTAGTGATTCTTAC
TGGGATTAATCGGTAATTTACAGCTCTAAAAATGATATTCTGTTGNTAGT
GATCCTTACTGGGATTAATCGGTAATTTACAGCTCTAAAAATGGTATTCT
GTTGCCAAATTCATGAtgaattcataattttttggcCCATTTCATTACGA
AGACTCTCATaagatatgttcttataaaaaaacgtgtacgggTTTACGAT
TGCCTTAAAAAAGGACACGTTtcggtacacgtttttttataagaagaaac
tataaaggaacataaggcttcaatggcaaaaaatgttaagaacaagctaa
gaacattttaaggctttgtggactcaaaaacagccaatttcttatagaaa
aatgggTTAAAAtagtcacaaaatggtgaacattttgagaacatttttag
tcttgaaacccaaaaagttaagaacatccgaaggcttcaaaaaaattttc
tttggatgTTGTGTATTTCACAATGTCACCCTTTGCAAGCAGAGGGAAAA
TTAGTAATTCCTTTGCTGACTAGACGAAAACTcttgaaaaatttcgaaat
tatcAGGATGCTCTTCACCTACTAAACTTTAACAATTGCAATATGTTATT
AAAGTATATTCGCCAACCCTGGGGAAGTATTTTAACTTTTGACTGAAACT
TTAAACCAAAACTTTAAACACTtcttgaaatagaactttagtTTTTAGAT
ACCATATGCTAAGTACATTTACAAGGGTGCTACAATAGAAGATTAGTAAC
GAAGAAATATTATAACATTTTGATTTGAACTAGTCTTGAATATaattcag
aaaaaacttttcaaggTCAAATtcccaaaactctcaaattacaccatctt
tttaatttatgatttataagactttcctgaaaataatttctttgcAATAA
ATATGTTGTAGGTAAAGAAAAGGTTGTGCGTTGTGCTGTCTAGTGCGAAT
GGCTTGACAGAAGATGTTGTCTTAAAAACACAGTCTCATTCTTGTAACCA
GCTTGAAAGACAGATTCCTTTTTGACATCTAACTTCTTTGTTTGCATACA
GCAGATTGAGCAAGAGGAGATCGAGTCACATATGGTCTTTCTCCCTCATT
TCCTTAACTTTCACGTTTTACTATTATTTTAAACTTGAGCCAAATTTTAC
AAGAGTAGTATTTTAACTTCGATGTGAAATTGACTTTTTATGCTTACTAG
TTTCAACAAGAGGTATGAAATAGGTGCCTTCAGTTTGAAGGTTTGTTTCT
GCTAGTAACAACATGTTTGAAGAGTGATTTAGGTTGAATAGTCCCTGCGA
GGTTTAATCTCCAAGCTCCCGGGATGGGTACTAGGCGGTTGGCGGACGAG
gagtatgtgcggacgggacctccgaagaCAGACCATTAGAGAGactcttt
tgctatttttcctcttgaaatcaaaaaatttcctaaaaattgtgaatttt
ccgacccttcgAGAGACttttggaaggtgaaaaaaacagatgagatggag
tttttatataagatactttaataattagTCATTTGAAGTTATAAatatga
cgcgttctttagaaaaagtagcaaaattattttattactggttaacgacc
aaccaaatcaaatcaaataagagcttgtaaaactccatctcgtcccaaaa
aaaaaccgacccttatcgTCCACACATGACCAGCATCCATTTTCGCCTAA
ATACTAATTAATAGTACTTAGATAGTTAAGCCGTTTTATCCGGGAAatct
ttttttggattttgttatCACAGGGGAGATTCCCTTTTATCAAATTTAGG
GAAAATAAACATTTCTCGTGAATTTCTATTGTTGTcatcttttctatttt
cttattacattaatctcaggtaggtccattcagcatgtagcttgtttagc
ctcaaattgttctttattttgactAAATTAGCTTTGTACCCTGATTTCAC
TAATTAGACACCGCTCAATAGTCTGTAAAAGATTTGTTCgtatatttttg
tgtttttgagcaTCATTGTTGATATAGAATTTTTCCAAATTAAGAATAAA
AGGATTGTAGCAAAAAAGCAATATCTTtaagcaaacaaaattataacaaT
AGGCCACAAGCAATTtgaaacattgaattttttttcatatttttactaCC
TCATCTCATTAACTGATTTGGTCATTTTTCTACACATGGatgttaaattt
gaaaatgccaAACAATTGCTGGCGCAATAACACATCATTTAGGTTCCTAT
GTTTCGTTATCCTCAAGGTTGCTAAGCTAAGTTGCTTTAATCTCTAACAT
TTTCCAGGGCTAAAAATCAGCAGAGAGGTTCATTACAAAACAAAGTAAAC
CAAGTGATAAAGGGAATTTTATAATTCggtttttaatttgataaaacGAT
TTGTATGTTGGGTATTTTTCACGGTTATCTTTCACGGTGATGTTAATTCA
AATGGAAAATCTTCGTTGTATTTGTTTTTGGCTTAAGAAAACAGTTTCAA
GATCTactcaacggattagaataggtggattaacttctctcgttgctccc
aagagagatccattgtcttcttattgttacaagaaaaatctgtaaatgac
tctgcgcactcctcgtttagttttttcattgtttttataagaacaatttt
ccaatttatacAGTTTCGAAAACGAATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNtacaacttatcaagttttaattgctagcaaactcg
taaaaaagtttgataacctaacgaggagtgttttctatgagttcttaatc
cacctattctaatccgttgatcTACTATAACTTGTGCGTAgcttgaattt
tgaaagataGGATTTTTAATTATGCTTCTTGTCATCTTGTGAGCTTGCGA
TGGCTATCATCAGCTTTTGAACAAATGGAATCCCTCCCATAAAAGAGTAT
TTATAATTTGGTTTTCTTCTTGGGttacaaaaaatagaaaaacatttgaA
CCTAATTTAGGATCAAggtcttgaaaaaatgaaaaagagatttattttga
agataAGTTACTCGTCTGTAATGGATTTAGTGTTGGATTAAATAATGTGA
ATAGGTCTGTTTTTctcttcaaacattttcattttcttttttcgacCCAA
CTTTTTACGATGAATTCCAATATCCAACCTGGTTTTTCAAGACTCGTTTC
ATTTCATTCCATTCTTAGATGGGATAATCCTTAAGATAAATTTGTAAAGA
GAAAATACTTCCGTCTTTTGATATGAACCATTCAATCATCAACTTGAGCA
CAAAGCAGTTAaatgatttgaaatttgtatGACCAGAAATAGGATAATTT
GGTTTCACGCATGCGTAAGAGGTACAACGTTCCCATTCATTTGTANTTTG
TATGACCAGAAATAGGATAGTTTGGTTTCACGCATGCGTAAGAGGTAACG
TTCCCATTCATTTGTAGAATTAAATCGCTTTAGTCGTGTTTGTGCCAAAG
GTGACACTTATGCATGCACCTATGTTATGGATGATGTTTAAGTTTTCTAA
CAGATCTTCCCTGAGATCTTCCCATTCCAATTGAAAACGAAGAAgtgtga
aaatgaaataaactaGCCGCTGATCCGAAAGCCACTATATTCTCCTTTCG
ACTGATAAAGCGAGAAAAACTCATAAAAATTTAACtaattattttttagc
tttgaGAGTAACGTTTTCccgaaaaacaatttttaatttgaatattagac
tttgaaaaaaaactcgAATAAAACAAGGGACATGATAAAACTTTATCGAT
TCGGGGAACATTACGAAGATACAAGCTTTATCATCAAACTCTTCAATATC
GAGACAATAAAAGGAGAGAGTCATGCGTGTACAATCTTTACTaccttttg
atttgttttacgacatctatttttgattttttttcaggaatggTTCGCAA
GAACAAGAAGATCTCCATCAACGTCAGAGGGACTGTTTACGAAACGTTCG
AAGAAACGCTGCAACGTTTTCCACACACACTCCTCGGTGATCCCACCTTA
CGTATCTCGCACTACGACGTCCAACGCAACTCTCTTTATTTCGATAACAC
GTGTGAAGCTTTCGacgccattttgttttattatcaaTCGAACGGTTGCT
TGGTGCGACCGCCCTGGGTTCCCatggaaaaattcgaattcgaatgttta
tttttcaaattgggTGAAAACGCGATCAAATCGATGAAAGAACGTGAAGG
TTATGATACgcagaaaaaagtgacggtTAAAAACGAACGTAAAACGTGTC
GGCGTAAATTGTGGAATTTTCTGGAGAAACCAGAATCGTCGTTGATGTCG
AGATTGTATACTTTCTTATCACTGATGATGGTCTTTTTCTCCATCACGTT
GGACTGTTTTGAAACCACTTTACCGGTACTGCCGAGCGACTACGACATCA
TGCAAGATAACTGGGAGAAAACCAAACTTTCTTTGAACACTTTTTTCGCT
GCCGAATTCATCATCCGATTTTCGGCATGTCCGTACCGACGGAAATTCTG
TAAAGCTTTCTTGAATATTGTTGACTTTTTCGCCATTTTCCCttcatttt
tgacgtattttttaGACCGTGAAAACACGCGTAGTATAATGTTTGTGCGG
GTGTTACGTACGTTACGTGTCTTACGTTTGATACGcttatcaaaaagttt
tcaaacgCTCTCCGTTGTACTTCATATATTGGTAAAAAGTTTGGCAGATT
TACTAACGCTCATATTTTGCATGTTAATCTCGTGTACAATTTTTGGGAGC
ATTATATACTATGCAGAACATTTCAGTGAAAGCCCTGATCAACGAACTTC
GCAAATATCCAGTATACCTGAAGGAATGTATTTTGCCATGCAAACAGTTG
TCTCTATTGGTTACGGAGATATTGTCCCATCTTCGTTTGCTGGTAAAATT
ACTACAGCCATGACGGCTATTGTAGGGGCGTTAACAATGACTGTTCCTCT
CCTTTCGTTGGGCGGCAAATATTTCGCCACCTACACCAAGACTTTTGATG
TCAATTTGAGCGCCGACCTTATCAACACTCCAGGACCGAACGTTCAAAAC
GAAGAAGCGAAGAAGAGAGAACTTAACAAAACTACTAATGACttaaaaga
tatttaaaaaacttattaatttattttatatatATGATATATTCTCTATA
TTTTACaatcaacatttttataaaaaagacaatcaaatatttgaaaattg
aatcagCGTTGAActcaatttttcaacaaaaaaatagttttgctaAAATT
CAAGCTTGTCTTTAAAGTGAAATGTACCATTTGTTAGCACTTATAAAGGT
GGTTCAATGCATAGACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004237-exon-sc0000041-1491911889:361480..361729 | TCONS_00004237-exon-sc0000041-1491911889:361480..361729 | Clytia hemisphaerica | exon |
| TCONS_00004237-exon-sc0000041-1510915933:361480..361729 | TCONS_00004237-exon-sc0000041-1510915933:361480..361729 | Clytia hemisphaerica | exon |
| TCONS_00004237-exon-sc0000041-1575043694:361480..361729 | TCONS_00004237-exon-sc0000041-1575043694:361480..361729 | Clytia hemisphaerica | exon |
| TCONS_00004237-exon-sc0000041-1491911889:369617..371047 | TCONS_00004237-exon-sc0000041-1491911889:369617..371047 | Clytia hemisphaerica | exon |
| TCONS_00004237-exon-sc0000041-1510915933:369617..371047 | TCONS_00004237-exon-sc0000041-1510915933:369617..371047 | Clytia hemisphaerica | exon |
| TCONS_00004237-exon-sc0000041-1575043694:369617..371047 | TCONS_00004237-exon-sc0000041-1575043694:369617..371047 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041 | supercontig | sc0000041:361480..371047 + |
Blast
BLAST of TCONS_00004237 vs. Swiss-Prot (Human)
Match: KCNA1 (Potassium voltage-gated channel subfamily A member 1 OS=Homo sapiens GN=KCNA1 PE=1 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 1.536e-52 Identity = 132/407 (32.43%), Postives = 221/407 (54.30%), Query Frame = 1
Query: 268 KKISINVRGTVYETFEETLQRFPHTLLGDPTLRISHYDVQRNSLYFDNTCEAFDAILFYYQSNGCLVRPPWVPMXXXXXXXXXXXXXXNAIKSMKEREGYDTQKKVTVKNERKTCRRKLWNFLEKPESSLMSRLYTFLSLMMVFFSITLDCFETTLPVLPSDYDIMQ--DNWEKTKLSLNT----------------FFAAEFIIRFSACPYRRKFCKAFLNIVDFFAIFPSFLTYFLD---------RENTRSIMFXXXXXXXXXXXXXXXSKSFQTLSVVLHILVKSLADLLTLIFCMLISCTIFGSIIYYAEHFSESPDQRTSQISSIPEGMYFAMQTVVSIGYGDIVPSSFAGKITTAMTAIVGALTMTVPLLSLGGKYFATYTKTFDVNLSADLINTPGPNV 1407
+++ IN+ G +ET +TL +FP+TLLG+P R+ ++D RN +FD +FDAIL+YYQS G L RP VP++ F E F++LGE A++ +E EG+ +++ + K +R++W E PESS +R+ +S+M++ SI + C E TLP L D D + T + N+ +F+ E ++RF ACP + F K +N +D AI P F+T + E S+ +RV+R +RV R+ +LS+ + L ++ L S+ +L LIF + I +F S +Y+AE ++ S SSIP+ ++A+ ++ ++GYGD+ P + GKI ++ AI G LT+ +P+ + + Y + + A L++ PN+
Sbjct: 37 ERVVINISGLRFETQLKTLAQFPNTLLGNPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFYELGEEAMEKFREDEGFIKEEERPLP--EKEYQRQVWLLFEYPESSGPARVIAIVSVMVILISIVIFCLE-TLPELKDDKDFTGTVHRIDNTTVIYNSNIFTDPFFIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE-----AEEAESHFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQLLHVSSPNL 435
The following BLAST results are available for this feature:
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