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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004191 ID=TCONS_00004191|Name=TCONS_00004191|organism=Clytia hemisphaerica|type=transcript|length=1046bp
GTACAGAAATCATTTGATTTAAGCAAAGAATCGTTTTCAACTTTCCAGTA
CCTAGGATTGGACATCAACCAGACAGGAGAGTTTGTAGCAATGCACCAAA
ATGACTACATTAAGACACTTCAACCTATTGAATTGAAAGATACATCAAAA
CGTAATCTTACTCAAGAGTTACAACTGAAAGCTTTAATTGGACAAATACA
ATGGGTGTCAAAACAAACACGCCCTGATTTAGCTTTTGCGTCGTGTGATT
TAAGTAATCGTGTTAAAGATGGTACAACAGATGACATACGGTTAGCGAAC
AAGTATCTTCGAAAGCTTCAAAATTCAACTGCTCAGATCAACTTACCTAA
TATTGGTGATGTTAAAAAGTCAACGTTGTATGCTTATAGTGACGCATCAC
ACGCCAATCTTCCAGGATTTAAGTCTCAAGGAGGTATAATGAAACCTCCT
TGAGACTCATTAAAGGTGAAAATGGAAACTCTGCGCCAATTGTCTGGACT
TCAAAGAAAGTAAAACGTGTTGTGAAAAGTCCACTTGCTGCCGAGACTCT
TGCACTACAGGAAGCAGTAGAACACGCAACATTAATTAAAGCACTACTCT
GTGAGATTTATGATTCAGAACAATCAACATTTCCGACTGTTTGTATAACA
GACAGTAAATCATTGAGAGACACTGCTCACACATCTACAGTTGTTGAAGA
TAAAGGTCTTATGATTGACCTTTGCTGTTTACGAGAAATGATTCAAGGCA
AACTCATTACGATTGAATGGGTTCCTGCCTCAAAACAACTGGCAGATTGC
TCAACAAAATCGACAGCATCTGCTTCCTTATTGATGAAAGTTTTGGCTGG
TGAAGCTGGCCTTCCAAGTCAATAAGAAGACCCGCCAAATGTACATAGTG
TAAATATTGTTGGTATTGAACATTAAACTTCTGTTGACATTGTGTTATTG
ATGCAGAAACACTTTTGAGATTGATTTGGTCTCAGATTCAAGACACACAC
ACTTATGTTTCGTTACGTTATGTTACAACACGATGTACAACACTGG Run BLAST on NCBI protein sequence of TCONS_00004191-protein >TCONS_00004191-protein ID=TCONS_00004191-protein|Name=TCONS_00004191-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
VQKSFDLSKESFSTFQYLGLDINQTGEFVAMHQNDYIKTLQPIELKDTSK
RNLTQELQLKALIGQIQWVSKQTRPDLAFASCDLSNRVKDGTTDDIRLAN
KYLRKLQNSTAQINLPNIGDVKKSTLYAYSDASHANLPGFKSQGGIMKPP Run BLAST on NCBI transcript from alignment at sc0000039:710539..711584 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004191 ID=TCONS_00004191|Name=TCONS_00004191|organism=Clytia hemisphaerica|type=transcript|length=1046bp|location=Sequence derived from alignment at sc0000039:710539..711584 (Clytia hemisphaerica)
CCAGTGTTGTACATCGTGTTGTAACATAACGTAACGAAACATAAGTGTGT
GTGTCTTGAATCTGAGACCAAATCAATCTCAAAAGTGTTTCTGCATCAAT
AACACAATGTCAACAGAAGTTTAATGTTCAATACCAACAATATTTACACT
ATGTACATTTGGCGGGTCTTCTTATTGACTTGGAAGGCCAGCTTCACCAG
CCAAAACTTTCATCAATAAGGAAGCAGATGCTGTCGATTTTGTTGAGCAA
TCTGCCAGTTGTTTTGAGGCAGGAACCCATTCAATCGTAATGAGTTTGCC
TTGAATCATTTCTCGTAAACAGCAAAGGTCAATCATAAGACCTTTATCTT
CAACAACTGTAGATGTGTGAGCAGTGTCTCTCAATGATTTACTGTCTGTT
ATACAAACAGTCGGAAATGTTGATTGTTCTGAATCATAAATCTCACAGAG
TAGTGCTTTAATTAATGTTGCGTGTTCTACTGCTTCCTGTAGTGCAAGAG
TCTCGGCAGCAAGTGGACTTTTCACAACACGTTTTACTTTCTTTGAAGTC
CAGACAATTGGCGCAGAGTTTCCATTTTCACCTTTAATGAGTCTCAAGGA
GGTTTCATTATACCTCCTTGAGACTTAAATCCTGGAAGATTGGCGTGTGA
TGCGTCACTATAAGCATACAACGTTGACTTTTTAACATCACCAATATTAG
GTAAGTTGATCTGAGCAGTTGAATTTTGAAGCTTTCGAAGATACTTGTTC
GCTAACCGTATGTCATCTGTTGTACCATCTTTAACACGATTACTTAAATC
ACACGACGCAAAAGCTAAATCAGGGCGTGTTTGTTTTGACACCCATTGTA
TTTGTCCAATTAAAGCTTTCAGTTGTAACTCTTGAGTAAGATTACGTTTT
GATGTATCTTTCAATTCAATAGGTTGAAGTGTCTTAATGTAGTCATTTTG
GTGCATTGCTACAAACTCTCCTGTCTGGTTGATGTCCAATCCTAGGTACT
GGAAAGTTGAAAACGATTCTTTGCTTAAATCAAATGATTTCTGTAC Coding sequence (CDS) from alignment at sc0000039:710539..711584 >TCONS_00004191 ID=TCONS_00004191|Name=TCONS_00004191|organism=Clytia hemisphaerica|type=CDS|length=453bp|location=Sequence derived from alignment at sc0000039:710539..711584 (Clytia hemisphaerica)
TCAAGGAGGTTTCATTATACCTCCTTGAGACTTAAATCCTGGAAGATTGG
CGTGTGATGCGTCACTATAAGCATACAACGTTGACTTTTTAACATCACCA
ATATTAGGTAAGTTGATCTGAGCAGTTGAATTTTGAAGCTTTCGAAGATA
CTTGTTCGCTAACCGTATGTCATCTGTTGTACCATCTTTAACACGATTAC
TTAAATCACACGACGCAAAAGCTAAATCAGGGCGTGTTTGTTTTGACACC
CATTGTATTTGTCCAATTAAAGCTTTCAGTTGTAACTCTTGAGTAAGATT
ACGTTTTGATGTATCTTTCAATTCAATAGGTTGAAGTGTCTTAATGTAGT
CATTTTGGTGCATTGCTACAAACTCTCCTGTCTGGTTGATGTCCAATCCT
AGGTACTGGAAAGTTGAAAACGATTCTTTGCTTAAATCAAATGATTTCTG
TAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004191-exon-sc0000039-1491911889:710539..711584 | TCONS_00004191-exon-sc0000039-1491911889:710539..711584 | Clytia hemisphaerica | exon |
| TCONS_00004191-exon-sc0000039-1510915933:710539..711584 | TCONS_00004191-exon-sc0000039-1510915933:710539..711584 | Clytia hemisphaerica | exon |
| TCONS_00004191-exon-sc0000039-1575043694:710539..711584 | TCONS_00004191-exon-sc0000039-1575043694:710539..711584 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:710539..711584 . |
Blast
The following BLAST results are available for this feature:
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