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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004189 ID=TCONS_00004189|Name=TCONS_00004189|organism=Clytia hemisphaerica|type=transcript|length=882bp
TCACCAACAACGATAATTTGGTTCTCTCTCACAATTATACTTACTACTCT
CAAAAGTATATCTCACCATTCAATAATTGAAGTTACTACTTTATACCAAC
CCAATGCTACTACTGAACCAATCCACAGCCATCCCAAACTTTCATCCTTT
AACTCTCTGAATTTCTTCAGTGATGATATATGTTGGCATGATCTTAATAC
CAGCTCAGAAAACTATAACTGGGAGATGGTGCTCAGAAAGAAAACCCTGA
ACAACATGCTGGAAAATGTTAAACAAGAGTCACGTCTCCTTCAAGACATA
ATAAACTTACCAAAGAAATGATTTCAATTGAGGTTAACTTTCTTAAATCT
TATAAAGGGACATCTCAACTTGAGGAAGAAAGAGCAATAAAAgctattaa
aaagaaaatacttttactcattttatgcaaaacaatttttcaacaaaatt
ggACCGTTACTAGAAGAAAGAAGGAAATCTGATCAGAGATCCAGAAAAAA
TGGCAGAGATCCTCTCCCAGCAATACAGCTCAGTCTTCAGCACACCCAAA
CACCCTTCTCCTCCAACAGCTGATCAACTATCACAAAATGCATATATCCC
ATTAACAAGAAAAGATTTTGAGGATATGATTAATTAACTCAATAATACCT
CTGCAGCTGGTCCAGATGGCTTCCCAGCAATCTTTctaaaaaactgcaaa
aatcaCTGTCCAGACCTCTTCTCATCCTTTGGGGAAAATGCTTGGATACT
GGACAAACCCCTGGAACCCTGAAAAAATCCCTCTTTGTCCCTATCCACAA
AGGATGAAATTGAACTTAAACAGAAAGATATCGCCCAGTAGCCCCCACCT
ggtgaaaatcttcaaaaaaatctttaaaaaac Run BLAST on NCBI transcript from alignment at sc0000039:652475..653356 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004189 ID=TCONS_00004189|Name=TCONS_00004189|organism=Clytia hemisphaerica|type=transcript|length=882bp|location=Sequence derived from alignment at sc0000039:652475..653356 (Clytia hemisphaerica)
gttttttaaagatttttttgaagattttcaccAGGTGGGGGCTACTGGGC
GATATCTTTCTGTTTAAGTTCAATTTCATCCTTTGTGGATAGGGACAAAG
AGGGATTTTTTCAGGGTTCCAGGGGTTTGTCCAGTATCCAAGCATTTTCC
CCAAAGGATGAGAAGAGGTCTGGACAGtgatttttgcagttttttagAAA
GATTGCTGGGAAGCCATCTGGACCAGCTGCAGAGGTATTATTGAGTTAAT
TAATCATATCCTCAAAATCTTTTCTTGTTAATGGGATATATGCATTTTGT
GATAGTTGATCAGCTGTTGGAGGAGAAGGGTGTTTGGGTGTGCTGAAGAC
TGAGCTGTATTGCTGGGAGAGGATCTCTGCCATTTTTTCTGGATCTCTGA
TCAGATTTCCTTCTTTCTTCTAGTAACGGTccaattttgttgaaaaattg
ttttgcataaaatgagtaaaagtattttctttttaatagcTTTTATTGCT
CTTTCTTCCTCAAGTTGAGATGTCCCTTTATAAGATTTAAGAAAGTTAAC
CTCAATTGAAATCATTTCTTTGGTAAGTTTATTATGTCTTGAAGGAGACG
TGACTCTTGTTTAACATTTTCCAGCATGTTGTTCAGGGTTTTCTTTCTGA
GCACCATCTCCCAGTTATAGTTTTCTGAGCTGGTATTAAGATCATGCCAA
CATATATCATCACTGAAGAAATTCAGAGAGTTAAAGGATGAAAGTTTGGG
ATGGCTGTGGATTGGTTCAGTAGTAGCATTGGGTTGGTATAAAGTAGTAA
CTTCAATTATTGAATGGTGAGATATACTTTTGAGAGTAGTAAGTATAATT
GTGAGAGAGAACCAAATTATCGTTGTTGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004189-exon-sc0000039-1491911889:652475..653356 | TCONS_00004189-exon-sc0000039-1491911889:652475..653356 | Clytia hemisphaerica | exon |
| TCONS_00004189-exon-sc0000039-1510915933:652475..653356 | TCONS_00004189-exon-sc0000039-1510915933:652475..653356 | Clytia hemisphaerica | exon |
| TCONS_00004189-exon-sc0000039-1575043694:652475..653356 | TCONS_00004189-exon-sc0000039-1575043694:652475..653356 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:652475..653356 . |
Blast
The following BLAST results are available for this feature:
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