TCONS_00004150 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004150
Unique NameTCONS_00004150
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3711

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004150 ID=TCONS_00004150|Name=TCONS_00004150|organism=Clytia hemisphaerica|type=transcript|length=3711bp
ttttagggtTATAAATAATGATTGTAAAAAATATGCTTGATATGTGGAGA
ATGATGGGCTGAAAAAGAGAGAGTAACGCAAAACAGTTCACTCTCTATCG
accaaataaaaagttatgaagaagaagagaaaaTATCACAAAAGATACTA
TTAAAACAAATGGAACCCAAAGAAGAAAGTGAGAAAGAAGAAACCgttga
aaaaatgttggaaGTTCATCTAACTGGTTGCAGCAAAGGATTAGGGATGA
AAATCATAGGAGGTTTGGACCCAAATGGCAATTACACAGGGATTTTTGTC
AAACAGATTTTACCTGATGGCTGTATCGACAAAGATGgTCAAATCAATTT
AGGTGATATGATTTGTGAAGTGAATAATTATGATTTACGCCACTGTTCAC
AAGCAGATGCCATTTCTTATTTGAGAGTGGCTGCACAAAGCGGAGAAGTT
CGTCTACTCGTCGATAACACGCAGCAAGCACAAGAATTATTTCTGGCTTT
GTTTGAAAATCGGAGACCTTCACAGCCGACCACAAAACCGAATAATTTGA
CTGACCCTTCGCAAGAAACAGgaaatgacaaaaaaagtcttttgaacaTT
CATTCTCCGTCTTTCGATTCTGGCTTATATGGCTCTTCATTCAATTCgca
tgacgtcactcatcatgatGTCATCAATAATGATCCAGTCAAAACAGTAT
TTATTCTTCACGAAACATCACTCGGTATAAGTCTTGGAGGTGGCACGGAC
AAACAAGATGGCCCGAATATTTTTATCTCTGATATCGTTTCTGGAAGTGA
TGTTTTTAACGAAGGTTCATTACGTACTGGTGACGTCATCATGTCTATCA
ACGGCGAATCGTTCGTTGGTTTGACGAATGAGCAAGCCAAGAGCAGTCTC
TCTCGCATGAAACTAAGAAAAGACTTGAGATCTTTTCAAATCGCGTATGT
TGAAAAAGAGCAAATCCATTTGATCAAGGAGCAAATCACTCCAAGGAGGA
ATCTACCTTCCACTTCTACTCCACAACAAGCAATCTCAACAAACGAAGCC
TTTCAAAGTACACCTCGCAAGCAGAACGATTCTCTTTTAAACGAACTTTA
TGACGTCATGGCAGATATAcaagaaagcgaaagtgattGGAATAGTCAAA
AAATGTCTCCACAAGAATTGAAAAATGGCGAAGATGATGTTTTTGTAaaa
cACATTCCTCCTCAAAGAACGATTTCACATTACCTACAACAAGATGTTCC
TTCATCTCAAGACGAGGTCGCGCGGAAGAAAGCGAAAAGACCCTCTGAAA
CTTTATCACTTGAAGCACACACAACTATCAAACTTGAAAAGCTAGAGGgg
GCTTTACAACATTTGGGACTTTCACCAAACCAGACTCAACGAAAAGAGAT
TCGAAAACGGCTTCAATCAGATGCTGATGGTAGTGTCACTTATGGAGATT
TTGTAAGGATTGCAAGAGAAGTGTTACATTTGAACAACGGTCTAAAAGAT
CGGACACAATCCTTGAAGAATAAATCTCtaactttccaaaaatcaaTTAT
GGAAGAAATGGATACGACGACGACAACGAAAGTTGATGAGAACGAGAATA
TGATTTCGTGTAATGATGAGATTTATCGGCTACGGCGTGAACGTGACGAA
GCCTTACGTGATGCACGCTACTACCGGGATTTACTTCACGAAAAAGACGC
CGACTGTTTACAGTTAGAGGAAGATCTTCAAGTTACGCAACAACAGGTGG
CCGTCGCACGCCGTGAGTGTAACACGTTACGTTACGAATCACGTAAAGAA
ATAGAAGCGTCGCAACATCAACATGAACAACAAACGGAAAAGACGATTGA
GAGGCTAGAACAAGAGAATTCGGGTTTGAGATCAAATTCACTTGGGACGA
AAGACTTAAAAGACCTTCAAAAACGATTGGTTGTGGTCGGCTGTCAATTA
CGTAAAACGGAAATCAGTAAACGTTCGTACGAAGTAGCTGTCGATAAACT
GACCAAATTTGTCGAGaaagttcaTCTCAATTTAGACTCACAGCAAGACA
CGAGTTCTTCAAAGAGGACGCGAAATCGAAGTAAAGAACTTTCAAGCGAA
GCCAAAGAAACGATTCGAAACGTTAAAATGCTACTGGAGGAAGAACcATT
ACCATTTGGTTGGGAAGAAGTTTACTCACCGGAAGGAACGCGCTATTACA
TGAATCACGTGACTCAAACGACTTCATGGGTTCACCCGATTTCATCCGTT
TCTCGAAAACCGAAATCCGTAAAAAGTCGTAAAAATTCAGCATCATCCAA
AAGCAGCTGAAGGGAGATTTTGGAAATTAAATTTATGGGATCAAAATTAT
TGTGGATTATTTCAGTTTTTATTATCGTCATTTTTATACTGTatctatat
ttctttttttcaaacgaatattttttatttacaataaCTTTAACCTTAGA
TAGCCTTTCGATGTTGATGTCATACCTTTACAATAGAATAATCTGAAAAT
TGTCTATCTAAAAATGGAACATTCAAGTGAGTCGAGAGTGAAATCTGTCT
AAATTGATGACGCGTAGGTTGTCAGAGTTATACTTGTTGAAAAAAACCAC
AAACTAATTTCAAGTGGATTGAATATTGTCTATAATTCGCCATCAagctt
actctcgggtacctaataaccgGTGGGGGTGGGGGCGCTaattaatgttt
taaaaattttccacccaggacattcttattccaaccccctccccccgctt
attcctacccccggctattaggtacccgagagtatactCCTTGACATAAA
TAACATTATTTTACGcttttaattaatttaataatatattatgaattttt
ttataccTCTAAATAATATTTAATGTACAAATCTGGTTTTACGGACGGAA
CAAGTATTACAGAAACAACGTTGACTGCATTTTTGTTCTTGTTGAGGTCT
ATGTCTAATATATCGACAGTCTTTCAATTTCTCACACGCAAAACTAAAAT
TTGTCACCAATTCCAAGTTGATCAAATAACgtaaattttgacgaattttt
ctCCACCTTTTTAAAGCGACAATATTGTGGAATTTTTTGAATCGGTGGGC
GGGTGGGTGTATCGTTGAGGGTGTTTCTTTTTCGGGCGGTAGATCAGAAA
GTGAGCGACTTCTTCGACGTCCCAAACGTTTATGAGTGCTTGGTTGATAG
GTATCTGTTGTGAAGTTCAAAGGAACGACTTGAACGTTTTTATTTAAATC
CAATGTAAGAGCTCTTGCTTTCTGTAACTTATCCGATCGTTTACATAATG
GCGGACTAGCTGCGTAACTGGCCGGTAAAAATGTGGATGATTTGGGTCTT
GGTTTCGTGTTCCGTAACAGGAGTTCATCTTCTCGGTGTTTAGGTATTGA
AGGAAGTAAACGACTCTGCTTAGCGAgaaatttctctttttctcgTTTGA
TTTGTACCGTATTCTTTTCTTTCTCTCGTTTGAAGCgataaatctcgtga
tccaaatTACTAACAGTTCGTCTGTTCAGACTAACCGTTTGTTTGAGTTT
GTTGGAAGTTGTACTGAGCGAACCAATGAAAGTCCCTTCGATGTTCATTC
TTGATAatactgaaacaaaaataaacaagctcTTTAAAAAGTTTCGACCT
GTGTACTCGCTCgcaaacatttattttttaacggaGAATCGAATATACCC
TCTCTCTATTT
Run BLAST on NCBI

transcript from alignment at sc0000039:685990..696757-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004150 ID=TCONS_00004150|Name=TCONS_00004150|organism=Clytia hemisphaerica|type=transcript|length=10768bp|location=Sequence derived from alignment at sc0000039:685990..696757- (Clytia hemisphaerica)
TTTTAGGGTTATAAATAATGATTGTAAAAAATATGCTTGATATGTGGAGA
ATGATGGGCTGAAAAAGAGAGAGTAACGCAAAACAGTTCACTCTCTATCG
ACCAAATAAAAAGTTATGAAGAAGAAGAGAAAATATCACAAAAGATACTA
TTAAAACAAATGTAACATGTAATTATTAACTTTTCACTTTTCTTTCCTTG
ATGAGTTCTTCTCCCAACTTTGTTATGCTTGTTCACTCTTTGATTGATTC
TTGGTGATTTTTAGGGAACCCAAAGAAGAAAGTGAGAAAGAAGAAACCGT
TGAAAAAATGTTGGAAGTTCATCTAACTGGTTGCAGCAAAGGATTAGGTA
GAAAACACTCTTTAATTTAAACTTACAGTGAAATACAGTACAGTAAAAAT
TTTTTCTGAAGAATTTAAAAGAATAATTAATGTAAAAACCTTTGAAAGAT
CGATTCCTTTTGAATTCCCAAATAGTGCAAGTTCAAATTATTCTTTATCC
TACAATAAATACGTATTTCGGTTTAGATCTCTTTTCATTTTAAATATTGG
GTTCGTATCCGCTAAATTTGTTTTAATTGTTCTAGTAACGTGTCTCTCGT
AAAATTTGGTTTGTTTTGTCTTTTGTCTTTTAGGATTTTGGGTTGTTAAA
ATTCATTGGTCATTTGATTGTTGTCATATGATGTGGGAAAAGTTTTAGTG
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTCTTTTAGGATTTTGGGTTGTTAAAATTCATTGGTCATT
TGATTGTTGTCATATGATGTGGGAAAAGTTTTAGTGTTTTCTGAAATTTG
ATTAGCTTCTTATATTGAAATTACTCATTATTACTTATACTTGCTTTAGG
GATGAAAATCATAGGAGGTTTGGACCCAAATGGCAATTACACAGGGATTT
TTGTCAAACAGATTTTACCTGATGGCTGTATCGACAAAGATGGTACGTTA
ACGTATATATTTTTAATTTTTTAAGCTTTGTAAATCTCCTTAAATTTAGC
TTACTGCTTGCCTCTTGGAGAAAAAGGTTTTCCTTAGCTTATATTTTGAA
TTATTGAAATTTTCTATGTTTTAGGTCAAATCAATTTAGGTGATATGATT
TGTGAAGTGAATAATTATGATTTACGCCACTGTTCACAAGCAGATGCCAT
TTCTTATTTGAGAGTGGCTGCACAAAGCGGAGAAGTTCGTCTACTCGTCG
ATAACACGCAGCAAGCACAGTAAGAAGAAATCTCACTTTGATGATATGGA
CTGCCTTGCTAATGGTTTACAATTTGAACTTTTTAAAGTTAAAAAACTAA
TTTTCAAATAATCGGGGACCAACCCTTAGGACCCGATGTATCTTTTATGG
GAAGTGTGTGTAGCTGCTCCAAAAGTAGATTTTATTTTGAGACTTAATTG
GGAAGGGATTGTGAAAACCAGACAAAATCTATTACGGTTAAAAGATTAAC
GTTACAGCTAATAAACCCCTTCTCCTCGAATTTGGTTGAAAATTGATTTT
TTCAAAGCTGAATTCAACAAAAATGATTGATACAATCAGAAAAAAGTCTG
ATACATTAAGGCTCAGACAAAATCTGAAGTCCATTGTACCCTATCGGACA
AAATCTTGATCTTTTTAAAAGACATTTAGGGACACAATGTAATTTTGATT
TTCATTTCAGAGAATTATTTCTGGCTTTGTTTGAAAATCGGAGACCTTCA
CAGCCGACCACAAAACCGAATAATTTGACTGACCCTTCGCAAGAAACAGG
TTGGTGATATTTCCATTGCATTTGTGAAAGCGTTTACTGTATCAGACGTA
CGGTTAAAATAACTGCTATTCTGTGAAACCCTGTGATCTTTATTTAGCTT
AAAGCATTTCTTCGATTTTATAGCAGTAGCGAAACTATTACTTGCAGTTA
CTGTAACTCAAAGAAAGCAGAAAAATGAACCTTTTTTTTGCGTTGTTATT
TGTCGACTTTTTGAAATCAAGTTGAATTTGCATGGTTTTCTTTTAGGAAA
TGACAAAAAAAGTCTTTTGAACATTCATTCTCCGTCTTTCGATTCTGGCT
TATATGGCTCTTCATTCAATTCGCATGACGTCACTCATCATGATGTCATC
AATAATGATCCAGTCAAAACAGTATTTATTCTTCACGAAACATCACTCGG
TATAAGTCTTGGAGGTGGCACGGACAAACAAGATGGCCCGAATATTTTTA
TCTCTGATATCGTTTCTGGAAGTGATGTTTTTAACGTAGGTTATATTTCA
GTGTCTGTAATGAAGATGTCTAATGGGAATTAAATATCTTGTTCCAGAAG
ATTTATGCCCATACACCTTTGTTATATACCTTAGAAAGAATGATCGAATA
TCTAAAGCTCTACATACCTGTATCTCTAGGAATATCACATTAAGATGTCT
ATTTGTTTACTTTATATTTTCATTATTATTTGATGACTAAAGCCTAAAGT
TTAAATATTTTTCCATCTCCCATCTAAAGGAAGGTTCATTACGTACTGGT
GACGTCATCATGTCTATCAACGGCGAATCGTTCGTTGGTTTGACGAATGA
GCAAGCCAAGAGCAGTCTCTCTCGCATGAAACTAAGGTTAGTTTTTAGCT
GTAGTTATGTATTTTTGAATCCCGCTGTTTGTGTTCTATATGTATCTTTT
CATCCCTTATATTATCACCTGTAGGCGAAAAGTCTATAGAAACTATTTTA
TCGTGAAGTTCAAACTTCAAAACAAAAGGATTAAAGAGAAGTACGATAAT
TTTTCATGTTTTGAACTTAGGTGGAAAATGTTAAATTAGTTATGACCTTC
AAGTTTGTCCTCTGAAAGAATTTTTCTGATTTTTTTCTGAAATAATAATT
TTAGCTTGCGAGGTGTATTTTGAGAGCTGACTTTTTTGTGCTCTTATTCT
TCTATTCAGAAAAGACTTGAGATCTTTTCAAATCGCGTATGTTGAAAAAG
AGCAAATCCATTTGATCAAGGAGCAAATCACTCCAAGGAGGAATCTACCT
TCCACTTCTACTCCACAACAAGCAATCTCAACAAACGAAGCCTTTCAAAG
TACACCTCGCAAGCAGAACGATTCTCTTTTAAACGAACTTTATGACGTCA
TGGCAGATATACAAGAAAGCGAAAGTGATTGGAATAGTCAAAAAATGTCT
CCACAAGAATTGAAAAATGGCGAAGATGATGTTTTTGTAAAACGTAAAAT
TTTATTTCCGCCAAGATTTCTTAGTGTTCCGTTTTTAAAGAGTAGGTTTT
TATTTTATTTTATTCTCTTCTGTCTTAAGGCTTTTAAGAACTTATACAGG
AGCAGAAAATGACTCCCTTTGAGAAAACTCAGTCTTATGAATTAGAAAAT
GAGAATGGTATATCATTTTGATGGATCCAATTTAGAAAGAGTTTTGAGCC
TTTTTCAACTGAAAGTTCGAACATAAAATCATGAATTTTCTTCCTGACTG
ATCATGACATCATGAATTTTTTTATAATCTTGGGTTTTACGATTTTTTTA
TTGTGATACTCAATTATTTTTGTCACGTTTATCATGTACTTGGGCAACAA
ATTGAATTTAGGGTGCCTTTGTTAGTTGGACTTCGGCTAAATACACATTC
TTTTACTTTATTTACGCCGGATATCATTTCTTTCATCAAGTCTTTTTATA
AGGGAAAGTACGATTTTCGATTTTCTTATGTTTGACTCTTTTATCCTTTC
ATTCTTTTAGACATTCCTCCTCAAAGAACGATTTCACATTACCTACAACA
AGATGTTCCTTCATCTCAAGACGAGGTCGCGCGGAAGAAAGCGAAAAGAC
CCTCTGAAACTTTATCACTTGAAGCACACACAACTATCAAACTTGAAAAG
CTAGAGGGGGTATTTCAATTTTTATTTCGACTTCTTCCCTGTATGTTGGC
GGGATATCTTTGTTCTCGAAACCTGTTTAATTTTTTTAATATCACCTTTT
CATTTTTCTCACAAATTTTCACATATACACAGGCTTTACAACATTTGGGA
CTTTCACCAAACCAGACTCAACGAAAAGAGATTCGAAAACGGCTTCAATC
AGATGCTGATGGTAGTGTCACTTATGGAGGTTCGTTTGACGTACTCTGAT
TTACGATTAGGTTTTAAATTCTTATTCCGTCTCATAGAAGTTCAAAAAGA
GCAATTTCGTCTCAAAATTCGGTAAAATTCAATAAAGTGTTAAGAATATG
GTCAAATTTGTTATTTTAAGTCCATTTTCTGTCTCAAACAATAGCTTTGC
TTTTGATCGTTTAACTTTGACCGATGCCTGGCGCTGCAGGGAACGTTACC
GTACGGTAATTGTTGAAATTCCACCAGAGATTGCGTTTGTCCATGAAGGC
ATTCGTAATTTCATTAATAAAAAGTAACGAGATATTTTCCCGACAAAAAT
GCAAATTTACTTGACCCCAAAATTTAAGTTGTAAACTTCGGACAAGGCTT
TATTTGGGCATAAAGAATTGATTAATTTTTGCTTTTATTTCATATAGATT
TTGTAAGGATTGCAAGAGAAGTGTTACATTTGAACAACGGTCTAAAAGAT
CGGACACAATCCTTGAAGAATAAATCTCTAACTTTCCAAAAATCAATTAT
GGAAGAAATGGTGAGGGATTTTTATATTGTGCTGTCAAATTGCATCCTTG
AAATTCATCCTTACTCAGCTAGATTGAATTCAGGGGATAGAGTCTGTATA
TTGTATTTTCAATTCAGGTTTACTGTTTTTCGCAGCTGAGTGTCTTATGA
GTATTAAATATACATAAGTACGGCATTGATTTTCTATTCAGTTCTATTCC
TTTTTCATTTTCAAAATCAGTTTTTCAACAAATCAAAATATTTCACTATA
TTATAAGAAGTGTATTGAGAATTGAGAGTTGTACAGTTAGGATCGTTTCA
ATTTTCTGTCTTAAGGATACGACGACGACAACGAAAGTTGATGAGAACGA
GAATATGATTTCGTGTAATGATGAGATTTATCGGCTACGGCGTGAACGTG
ACGAAGCCTTACGTGATGCACGCTACTACCGGGATTTACTTCACGAAAAA
GACGCCGACTGTTTACAGTTAGAGGAAGATCTTCAAGTTACGCAACAACA
GGTGGCCGTCGCACGCCGTGAGTGTAACACGTTACGTTACGAATCACGTA
AAGAAATAGAAGCGTCGCAACATCAACATGAACAACAAACGGAAAAGGTA
ATCTTTCGCGTTGTTTTTTTTCGAAACAGTTGCAGGTTAGTTTTCCATGG
AACTTTTTATGTCATTTTCAACTCTTTATGTCATTTTCAACTCTTTGTGT
TAACATTACGGATTTAAATTTTCGTATTCCTTCTCGCTTTCAAGTGGGTC
ATAGGATCCATAATTCCTCGAAAATGCTTATAATAGTCTAGTGCAGTTTT
TTGTATATTCCATGTCACGTTTTGTCTGTTTATTTTTCAGACGATTGAGA
GGCTAGAACAAGAGAATTCGGGTTTGAGATCAAATTCACTTGGGACGGTA
AGTCATGAAGCTTAATGAAATAACTGACAATCCAGACTGTCACGTCAAAA
AGTTGACATTCTTTCTATGGGCTTAGCATGCATTACTTATGAAAAATGGG
GTCAAATGTTTTCTTTATTACATGTCATGTGTTTTGAATCACTTACAGCT
TATGATGATTCTACTGTGTTGTTACAAAAGTGAAAAAATTCAAGATTTGG
ACATTTTGTTAATATTACGTAATTCACCATGTGCCTCTTGAAGTGACTCA
TTAATCTTCAACATATTTGTCGATGATGCCCTTTTCCGGGTCCAACGTCC
AATAAATCTTTCGTAAAGTTTCTTTGAATTAGTAACTAAACCTACACCTT
AGTCGATTCATGAAGGGTACTGTTAATTGGTCTTATGTCAACATATCTCA
TCTAATTCCAACACCACTCTCTAGAGATAGGAATATTAGGATATTCGGGA
TCGCTAATTGAAACTATATTCTTCGATTAGCGGTCAGCGAGGAAAAACCT
TTTGTCAACCTACTTATTTTTCCTATCTTTTAAAAGAAGGGTGCTGAAAT
TAGACCAACTTACGGTAGCGAATCCTGGGTGTAGCAAAGTATTAGTCTTT
CGTCACTTAAAATTATTTTTTGCGTCTTTTTCCANACAAAGTATTAGTTT
TTCGTCACTTAAAATTATATTTTGCATCTTTTTCCAACGTAAGCCTTGTA
TTGATATACTTTCGAAGGATTTGCAAACGGTATTTCTAGATTCGAATTGT
TGAAATACTGAAAAACACAAAAGCCTAAACACAGCTTTTCGAATTTATAC
ACCGTTCTACGGCACCAAAATTTACTGAATTTTACATTCCTGTGACCTTA
AAAATCTAATATATTACACAATGTATGTAAATGCTTTTCCAGAAAGACTT
AAAAGACCTTCAAAAACGATTGGTTGTGGTCGGCTGTCAATTACGTAAAA
CGGAAATCAGTAAACGTTCGTACGAAGTAGCTGTCGATAAACTGACCAAA
TTTGTCGAGGTGAGTACAACCACGCATTATGTGTCGTGATCCCACGTGCC
TCACTTCCGTTAATTTGACGTTTCTGACAGATTTTGGTACGTTTTGCAAT
GTTGTATTTTTTCTCTGTTCTTTTTTCAGAAAGTTCATCTCAATTTAGAC
TCACAGCAAGACACGAGGTTTGTCTTGACTTGACATTTTATAGTCACTAA
AATCAATTACCAAATCTAATTCATCGAATAATTAGTTTTAGACGGCCCCT
AAAAACGATAACGCTAAGAATGTCGCTATCCCAAAGTAGCTTCTTTTCTG
TTTGCGTTAAGATGTTTCTTTTTGTTTTTTAGAAACCCAGTACAATGAAG
AGACTCGATAAATATTTCTCCTAAAAGTTATCACAATCAATATTCACTTT
GTTTTTAGTTCTTCAAAGAGGACGCGAAATCGAAGTAAAGAACTTTCAAG
CGAAGCCAAAGAAACGATTCGAAACGTTAAAATGCTACTGGAGGAAGAAC
GTAAGTCGCTTCACAAATATGTATTTAAAATCTAGGGCGATTAGAATCCA
CCACAAAATTGAAATGAGTCTCTTGTTTAATAGCGAGTATATGTATATGT
AATTTTCTTGGACGGAGACGGTAAGGTTCTAATTTGACTAGATCCTGACC
AGCTGAGGACGACGGCAAATCAGCACTTTTACCGTCCTCGATATTGCGGG
TCAGAACTGCGGGTTATTCCAAATCGCTTCAGACACTCTACCTTCCTCAA
AAGTGCAAATACAAAAACTCGCTAATGCTTGACGCAATGATGAAATGTAT
TTCTTTGTTCACATACTACTAAATGAATTTACAAAACAAAAAACTATTGA
ATCTAGAATCATGTGCCTGTTTGGCTTTTGTCACTTTCACAGTAAATAAA
TTCATCTTGAAAAGCTTCAATCTTTAGGAAAACTTAAGTTTTTTGAGTAC
GAAGGTACGGTGAATTTTGTTAATATGGTTATTATATCTAAATCTTTTAT
TTCTGCGAAATTCGGGGAAAACCCTATGAGATTGATCTTGATCTATTTTT
CTTATCTTTTTTTTCAGCATTACCATTTGGTTGGGAAGAAGTTTACTCAC
CGGAAGGAACGCGCTATTACATGAAGTGAGTATTTGGAGAAAATTAATTT
TTGGGAGATACAAATCTTATTATATACATCTTGAGCGCAAATTTCACGAT
TGAAATGACAAACATATTTCCATTTTCGAAGGCCCATCGGGGCTGTGAAA
CAGGGCTGTCATATTGTAAGTTTCTATTAGAATTACCCCCAGCTCATATT
GTACGATTTCTCTGTTACCGGAAGATTCTGTAAAATCTTTCCACTTGTTT
TAATTTTCCAGTCACGTGACTCAAACGACTTCATGGGTTCACCCGATTTC
ATCCGTTTCTCGAAAACCGAAATCCGTAAAAAGTCGTAAAAATTCAGCAT
CATCCAAAAGCAGCTGAAGGGAGATTTTGGAAATTAAATTTATGGGATCA
AAATTATTGTGGATTATTTCAGTTTTTATTATCGTCATTTTTATACTGTA
TCTATATTTCTTTTTTTCAAACGAATATTTTTTATTTACAATAACTTTAA
CCTTAGATAGCCTTTCGATGTTGATGTCATACCTTTACAATAGAATAATC
TGAAAATTGTCTATCTAAAAATGGAACATTCAAGTGAGTCGAGAGTGAAA
TCTGTCTAAATTGATGACGCGTAGGTTGTCAGAGTTATACTTGTTGAAAA
AAACCACAAACTAATTTCAAGTGGATTGAATATTGTCTATAATTCGCCAT
CAAGCTTACTCTCGGGTACCTAATAACCGGTGGGGGTGGGGGCGCTAATT
AATGTTTTAAAAATTTTCCACCCAGGACATTCTTATTCCAACCCCCTCCC
CCCGCTTATTCCTACCCCCGGCTATTAGGTACCCGAGAGTATACTCCTTG
ACATAAATAACATTATTTTACGCTTTTAATTAATTTAATAATATATTATG
AATTTTTTTATACCTCTAAATAATATTTAATGTACAAATCTGGTTTTACG
GACGGAACAAGTATTACAGAAACAACGTTGACTGCATTTTTGTTCTTGTT
GAGGTCTATGTCTAATATATCGACAGTCTTTCAATTTCTCACACGCAAAA
CTAAAATTTGTCACCAATTCCAAGTTGATCAAATAACGTAAATTTTGACG
AATTTTTCTCCACCTTTTTAAAGCGACAATATTGTGGAATTTTTTGAATC
GGTGGGCGGGTGGGTGTATCGTTGAGGGTGTTTCTTTTTCGGGCGGTAGA
TCAGAAAGTGAGCGACTTCTTCGACGTCCCAAACGTTTATGAGTGCTTGG
TTGATAGGTATCTGTTGTGAAGTTCAAAGGAACGACTTGAACGTTTTTAT
TTAAATCCAATGTAAGAGCTCTTGCTTTCTGTAACTTATCCGATCGTTTA
CATAATGGCGGACTAGCTGCGTAACTGGCCGGTAAAAATGTGGATGATTT
GGGTCTTGGTTTCGTGTTCCGTAACAGGAGTTCATCTTCTCGGTGTTTAG
GTATTGAAGGAAGTAAACGACTCTGCTTAGCGAGAAATTTCTCTTTTTCT
CGTTTGATTTGTACCGTATTCTTTTCTTTCTCTCGTTTGAAGCGATAAAT
CTCGTGATCCAAATTACTAACAGTTCGTCTGTTCAGACTAACCGTTTGTT
TGAGTTTGTTGGAAGTTGTACTGAGCGAACCAATGAAAGTCCCTTCGATG
TTCATTCTTGATAATACTGAAACAAAAATAAACAAGCTCTTTAAAAAGTT
TCGACCTGTGTACTCGCTCGCAAACATTTATTTTTTAACGGAGAATCGAA
TATACCCTCTCTCTATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002303XLOC_002303Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004150-exon-sc0000039-1575043694:696597..696757TCONS_00004150-exon-sc0000039-1575043694:696597..696757Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:696411..696493TCONS_00004150-exon-sc0000039-1575043694:696411..696493Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:694416..694508TCONS_00004150-exon-sc0000039-1575043694:694416..694508Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:694139..694283TCONS_00004150-exon-sc0000039-1575043694:694139..694283Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:693609..693697TCONS_00004150-exon-sc0000039-1575043694:693609..693697Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:693123..693361TCONS_00004150-exon-sc0000039-1575043694:693123..693361Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:692772..692878TCONS_00004150-exon-sc0000039-1575043694:692772..692878Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:692165..692448TCONS_00004150-exon-sc0000039-1575043694:692165..692448Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:691499..691647TCONS_00004150-exon-sc0000039-1575043694:691499..691647Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:691279..691375TCONS_00004150-exon-sc0000039-1575043694:691279..691375Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:690748..690860TCONS_00004150-exon-sc0000039-1575043694:690748..690860Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:690161..690442TCONS_00004150-exon-sc0000039-1575043694:690161..690442Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:689861..689917TCONS_00004150-exon-sc0000039-1575043694:689861..689917Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:688849..688965TCONS_00004150-exon-sc0000039-1575043694:688849..688965Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:688691..688728TCONS_00004150-exon-sc0000039-1575043694:688691..688728Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:688358..688449TCONS_00004150-exon-sc0000039-1575043694:688358..688449Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:687733..687790TCONS_00004150-exon-sc0000039-1575043694:687733..687790Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1575043694:685990..687496TCONS_00004150-exon-sc0000039-1575043694:685990..687496Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:696597..696757TCONS_00004150-exon-sc0000039-1510915933:696597..696757Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:696411..696493TCONS_00004150-exon-sc0000039-1510915933:696411..696493Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:694416..694508TCONS_00004150-exon-sc0000039-1510915933:694416..694508Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:694139..694283TCONS_00004150-exon-sc0000039-1510915933:694139..694283Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:693609..693697TCONS_00004150-exon-sc0000039-1510915933:693609..693697Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:693123..693361TCONS_00004150-exon-sc0000039-1510915933:693123..693361Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:692772..692878TCONS_00004150-exon-sc0000039-1510915933:692772..692878Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:692165..692448TCONS_00004150-exon-sc0000039-1510915933:692165..692448Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:691499..691647TCONS_00004150-exon-sc0000039-1510915933:691499..691647Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:691279..691375TCONS_00004150-exon-sc0000039-1510915933:691279..691375Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:690748..690860TCONS_00004150-exon-sc0000039-1510915933:690748..690860Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:690161..690442TCONS_00004150-exon-sc0000039-1510915933:690161..690442Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:689861..689917TCONS_00004150-exon-sc0000039-1510915933:689861..689917Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:688849..688965TCONS_00004150-exon-sc0000039-1510915933:688849..688965Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:688691..688728TCONS_00004150-exon-sc0000039-1510915933:688691..688728Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:688358..688449TCONS_00004150-exon-sc0000039-1510915933:688358..688449Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:687733..687790TCONS_00004150-exon-sc0000039-1510915933:687733..687790Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1510915933:685990..687496TCONS_00004150-exon-sc0000039-1510915933:685990..687496Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:696597..696757TCONS_00004150-exon-sc0000039-1491911889:696597..696757Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:696411..696493TCONS_00004150-exon-sc0000039-1491911889:696411..696493Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:694416..694508TCONS_00004150-exon-sc0000039-1491911889:694416..694508Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:694139..694283TCONS_00004150-exon-sc0000039-1491911889:694139..694283Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:693609..693697TCONS_00004150-exon-sc0000039-1491911889:693609..693697Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:693123..693361TCONS_00004150-exon-sc0000039-1491911889:693123..693361Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:692772..692878TCONS_00004150-exon-sc0000039-1491911889:692772..692878Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:692165..692448TCONS_00004150-exon-sc0000039-1491911889:692165..692448Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:691499..691647TCONS_00004150-exon-sc0000039-1491911889:691499..691647Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:691279..691375TCONS_00004150-exon-sc0000039-1491911889:691279..691375Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:690748..690860TCONS_00004150-exon-sc0000039-1491911889:690748..690860Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:690161..690442TCONS_00004150-exon-sc0000039-1491911889:690161..690442Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:689861..689917TCONS_00004150-exon-sc0000039-1491911889:689861..689917Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:688849..688965TCONS_00004150-exon-sc0000039-1491911889:688849..688965Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:688691..688728TCONS_00004150-exon-sc0000039-1491911889:688691..688728Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:688358..688449TCONS_00004150-exon-sc0000039-1491911889:688358..688449Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:687733..687790TCONS_00004150-exon-sc0000039-1491911889:687733..687790Clytia hemisphaericaexon
TCONS_00004150-exon-sc0000039-1491911889:685990..687496TCONS_00004150-exon-sc0000039-1491911889:685990..687496Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:685990..696757 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.97437	0.93535	2.57073	0.972729	37.3182	22.5217	24.5167	27.6522	13.4587	21.3132	20.4552	13.5085	2.35815	3.18744	1.93853	5.05344	3.87492	3.40964	2.77013	8.19447	5.41842	5.65678	2.79664	4.13937	13.0019	6.15576	7.10161	6.06306	9.06437	5.11784
Blast
[Close]
BLAST of TCONS_00004150 vs. Swiss-Prot (Human)
Match: STXB4 (Syntaxin-binding protein 4 OS=Homo sapiens GN=STXBP4 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 2.130e-57
Identity = 163/566 (28.80%), Postives = 291/566 (51.41%), Query Frame = 1 
Query:  643 NSHDVTHHDVINNDPV-KTVFILHETSLGISLGGGTDKQDGPNIFISDIVSGSDVFNEGSLRTGDVIMSINGESFVGLTNEQAKSSLSRMKLRKDLRSFQIAYVEKEQIHLIKEQITPRRNLPSTSTPQQAISTNEAFQSTPRKQNDSLLNELYDVMADIQESESDWNSQKMSPQELKNGEDDVFVKHIPPQRTISHYLQQDVPSSQDEVARKKAKRPSETLSLEAHTTIKLEKLEGALQHLGLSPNQTQRKEIRKRLQSDADGSVTYGDFVRIAREVLHL-----NNGLKDRTQSLKNKSLTFQKSIMEEMDTTTTTKVDENENMISCNDEIXXXXXXXXXXXXXXXXYRDLLHEKDADCLQLEEDLXXXXXXXXXXRRECNTLRYESRKEI-EASQ---HQHEQQTEKTIERLEQENSGLRSNSLGTKD-----LKDLQKRLVVVGCQLRKTEISKRSYEVAVDKLTKFVEKVH----------LNLDSQQDXXXXXXX--------XXXXXELSSEAKETIRNVKMLLEEEPLPFGWEEVYSPEGTRYYMNHVTQTTSWVHPI 2241
            N+  V    ++  DP  + + I  ET LG+ + GG ++ +GP ++I +I+ G D + +G L+ GD ++S+N ES +G++ E+AKS ++  KLR +  +++IA++ ++      + I P  NL  TS  +       + +  P+    SL +   +++     S    N+  +S  E+K G +      I  + +       DV S+  E    +     E +SL      K EKLE AL +LG+ P + Q + +R+++Q+D+ G+V++GDFV++AR +  L     N G  + +  L ++ L    S  +EM+     K + ++ +   N                    ++ L E D    QL E+LQ  +Q+      E   LR  SR  + EA+Q   H  E   E+ I  LE + + L++      D     ++DL+KR++V+ CQLRK+E++++++E + +KL  FVE +            NL  ++   +S+ +        R+    L+ E+KE +++V+ LL+ + LP+GWEE Y+ +G +Y++NHVTQTTSW+HP+
Sbjct:    4 NTSTVVSPSLLEKDPAFQMITIAKETGLGLKVLGGINRNEGPLVYIQEIIPGGDCYKDGRLKPGDQLVSVNKESMIGVSFEEAKSIITGAKLRLE-SAWEIAFIRQK-----SDNIQP-ENLSCTSLIEA------SGEYGPQASTLSLFSSPPEILIPKTSSTPKTNNDILSSCEIKTGYNKTVQIPITSENSTVGLSNTDVASAWTENYGLQ-----EKISLNPSVRFKAEKLEMALNYLGIQPTKEQHQALRQQVQADSKGTVSFGDFVQVARNLFCLQLDEVNVGAHEISNILDSQLLPCDSSEADEME---RLKCERDDALKEVN------------------TLKEKLLESDKQRKQLTEELQNVKQEAKAVVEETRALR--SRIHLAEAAQRQAHGMEMDYEEVIRLLEAKITELKAQLADYSDQNKESVQDLKKRIMVLDCQLRKSEMARKTFEASTEKLLHFVEAIQEVFSDNSTPLSNLSERRAVLASQTSLTPLGRNGRSIPATLALESKELVKSVRALLDMDCLPYGWEEAYTADGIKYFINHVTQTTSWIHPV 528
The following BLAST results are available for this feature:
BLAST of TCONS_00004150 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STXB42.130e-5728.80Syntaxin-binding protein 4 OS=Homo sapiens GN=STXB... [more]
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