TCONS_00004146 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004146
Unique NameTCONS_00004146
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4270

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004146 ID=TCONS_00004146|Name=TCONS_00004146|organism=Clytia hemisphaerica|type=transcript|length=4270bp
AAGACAGTGTGTTGAAATGGAAGTCAAAAGCATCTTGAAATtTGTTCTTT
TGGTTGTGGTTTGTGTGGAGCATGCGTATTGCGTTAAAACATTCCACGAT
GAAGAACTGCATTCGAAAATCCCGCTTCGTTTGAAACGTGAAATCGAAGA
ACTTGTTCACAAACAACTTCATCAAACCATCTCATTGCATTACAAtacaa
atgatgacgtcatcagcttgTCACGTGATCCGATTATCAAAACGAATTTT
CACCATCGAGCAAGAAGAGATTTAGGTGACGGTATTGCTGGCAATGAAAC
AGTGTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAAGTGTGGTG
GCGGAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTTGTTTGAAT
GAAGATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGTGTCTCTGG
TTCATACGTCTTGGAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGA
CAGATGCCATCACTATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTT
GGCAAGTTGACCAGCACTGAGATCAAACTTTACAATTACGAACTCACCTC
GTCGACATTCAAGTTTGCACAGAGCATCCAANTAGTGAAATTTGTGAAGA
TAAAGATACTTGTGTGGTGGAATCGAGAGTTTTGACACTTCTTGGTACAA
GCACTGACCCATGCCCGTATACAAATAAATACCTCAAGATCGTCTATTCT
TGCAGTTCATTATCTTACAGAAGTACACCATACTTTTACGAATGGAACCA
TGTTGGATTAACCATCGTCCCTAGCGACAACTTGATAACATATGGTGCTG
AAGATGTAGAATCGTTTCATATCCATGGCAACGCTTTTGTAGCAGTTGCT
AACCACATCAACGATCAACGACAATATCATTTGGATTCTGaaatttatgt
ttttgattTGGCTAAACGACAATTTCGAAGTTTCCAAAAATTACGAACAG
ATGGTGCAATTGATTTGGAGTTTTTCGTGATTGGTCGAGGCATAACACGT
GAATATTTCCTCGCGGTTGCAAACCATGTCAAGGTTGTCCCTGGGCTCGG
CAAAACGCACGAGGTTGACTCTATCATCTACAAATGGAACTGGAATTTGT
TTGTTCCTTTTCAATGTATTAAAACGAACGGTGCCAAGAAATGGACTGCT
GTTACTGGTCAAAATGGCGAGTTCATATTAACACACACCAATATGCATGG
AAACGTCACCTTCTACAGTTACGATGGTTGGAGATTTTACTTGACCAAGA
AGCAGCCACAAGATCAGATCTTTCAACATTCTGCAACTACAACCTCCATC
TCTATCAACACTCCTTCCTTCTCCACTAAGATGTTGGCAATACAACCAAA
ACCAGAGTTTGTTGATGACGTCAATAACATCTACTCTTTCCAATTCAAAc
aagtttttcctaattttgacTTGTTGGAGACATGTTTACAAACTGTCCAA
CAGATTAATCGAACCGTTTACAATGAACTGTTACCACGTGCAAAGCAAGT
GAACGAATCCTTCACGAAGATTAAAAATGATATTGTACTTCTGGAGGATG
TTATTTATTTGACAGagAACAAGACTTTCACAGACCTCACAGTGAATGGA
AAAACCAACTTGAACAATGCCACAATCAAGAACATCAAACTCTCCCAATC
CGATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCAGAAGACAA
ACCAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAATCCTCGGTC
ACATATTCAACTGAACAAACGATTACTGGATtgaacaaatttcaaaatga
tgTCTATTTCAAGACATTGACTATAAATGGAAATGTATCCGTTGGCAATC
TAACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAATCTACATT
AACAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGCAATATCAC
ATTTGATTCCATCTCTGTCCAACACATCAACAATATTTCGACAACCAAGC
TTCGATCAATCAACAAAGCATCCAACATCTCTGGACAACAGACTTTCCAA
GACTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTCAATGGCTT
AGTTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATACAGATCAAA
ACATTACTGCATTGCATCAATTTACAAACAAGACCACAATGCAACAGGAT
TTCCATATCCAGGGCCTGGTCAACAATATGGACATTTCTACTATTGCTTC
AGACACCTTAAAGAAGAATAAAGAAGACACAGTCACTGCATATCAACGAT
TCTCCAGCATAGAAATCAAGGGAGATTTGAACATGGCGGACAAGAAGACA
ATTAATGATGTGGATGTCTCCAATCTCACTTCCAGTGGAATCTATCTGAA
CGCCGTCCAGGAATTTGGCAACATCGTATTCCAAAACAACGTCACTTTCA
ATGACCAAATATCGCTTGGTGAAACACTCAACAACGTCACAATCGATGAT
TTGGTATTCACAGATCAAACAACTGTCTTTCATCATCCAATCACATTCAA
GCAAAATATCACATGTTCTGATCACGTGACCGTGGATGGAAAAATCAACA
ACCTCAATATTACTGAAGACATCATGGACGTTTCATCCAACCAAACCATT
ACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTCAAACAATCTTCA
GGTCCATGATCATCTTGATGGAATTGACATCAATGCATTTATCAAGAACG
TTATGACTTACAATACAACTCAAAACGTAACTGCAACAAAATTNATCAGT
TGTGATTCGACAAAACTCGACTATCCAGAATCTAACAATCCTTGGTGACA
CATCCACCCATGCATTGAATGGATTGAATTTGACCGACATTGTTGGATCA
GCCTTGATGAAAGATGGTGATCAAACTATCCATGGTGATGTCTACGTAAA
TGAGCTTGTTATCAATGGTGATCTCAATATTACCAACCTTAACGGTCGTG
ACTTCTTGGAAGAAGTGATTCAGCTTAGCAACCCAGGATCCATTTCATCT
CACCAATTCTTCCAAGACGGTATCACAACACAGCAGTTGGTCACACAACT
ACTCAATGGTCAAAATCTAACAGAGTTTTTCAACAGNCCTGGTTAAACAT
CTTATTGAAACTTAAGGAAGAATCAATCCATAAAACCAACGGACAGATAT
CTGTTAATGGAACTAAATCCTTCTCAGATGTTTTAATCCGTGGTAATCTC
ACTCTTAATGGTTTATTAGATGGTTTAGAATTCCCTGGTGATTTCTTGCA
GCGATCCATTGATGAAGTGATCAATGGTACCTACACTTTCAACAACGTCA
CATTCGTCAAAAATATCACCGCTGATACGCTAAATGGTTACAATCTAACT
GAACTCTACGAACGTGTTTTGAGGAAGGTTGGCCATGAACAAATCGTCAT
CGCCAATTGGTCTTTCAATGATCACACTCACTTTGATGAACTTCAAGTTG
ATGGGTTGGTTGACGGAGTAAATCTATCACGTGATGCACTTTTAGCCAAT
CAGGATCATGTAATTTCTGGGGAAAAGACTTTCCATAACGGTACCCACGC
TAAACGTCTACTGGTGCATAACATGACAGTCAGTGGTCTGATTGATGGCG
TCAATTTGACTCAATTGAATGAAGAACTGGTGACAACATTAGCAGATGAC
ATCATTATCAAAGGGAAGAAGGTTTTCCAAAACCACGTGTCGTTTGGCGG
TAATTTAACGGTGGGATTGATCGACGGNTAACAACCTGTACGTAGAGAAG
ATCAACAATTATTCATTCCCTGGTGATTTTGTTCAAATTAGAGATGATGA
AAATATCACAATAACTGGCATAAAGACATTTTCAAACGACACCATAATCA
CCAATGACTTGATAATGTCACCAAACAGCACTATCAATGGATTCGACCTA
TCAGAGATCGCAAAGGAGATTGTCACTATTCATGAAAACGTTTCCATAGA
AACTGATGTTGTGTTTAAAAATCCAGTGAATTTGTCACAGAATCTTGAAG
TTGGACTTTTGAATCAAGTGAATATCTCGTCGGAAGAGTTGCTGTtgaaa
tcaaccaatcaaaaagTGACAGGTCATAAACACATACTGAAGTTGGAAGT
TCAAGGAGATGTCATAACTCCAAACCATATCAATGGAGTGGACGTACAGA
AGATGTACAACGAATCNATC
Run BLAST on NCBI

transcript from alignment at sc0000039:670285..683731-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004146 ID=TCONS_00004146|Name=TCONS_00004146|organism=Clytia hemisphaerica|type=transcript|length=13447bp|location=Sequence derived from alignment at sc0000039:670285..683731- (Clytia hemisphaerica)
AAGACAGTGTGTTGAAATGGAAGTCAAAAGCATCTTGAAATGTAAGTTTA GCTTTCTACCTTTTTATATATGCCTGGCCTTTAGTTTGTTCAGATTTGAT CAATATTTATCCGAAAGATGAACCTTTTTTCTAATATTTAAAGAAAGATC AATTTGCTTTTTTTTAATGTCAGATTTTGAGATTATCACCTTGGATTAAG TGAAATGTTAACTGTTTTCTACGAACACGATAATACAAGGCTTAGGATTA AATTTTGTTCAATCAAATTTTATCCCGTGTCAGGAGTTCAATCTTGTTTA CTGTCAAGATTTTTAAATGTCCCATCAAGGGTAGAATAAGCAATTTTTTT CCTCAGTCGCAACAAGGGTTACCCAAATGAATCTTGTGAACTTGAGATAA CAAAGTTTTTGGGCCTCGATTTATCCTCATTTACAGTAAACAAGGTATGG ATATGTGCTGTGTTCGAACCGAAAAAAAAGCTACGGTTTGGAAGCTTTTT ATATCCATTGTATTGGTTCTAGCTTGGACTTGCGTTGAAAAATTAGATTG TTTTCCTAGAGTTATATTTCATTGAAAATTCGGGATCGATTTTTCTTTTT TTAGAGTATAAATGCGAAAACTCAACTCCTATTGAATATTAGCCATTAAA TTGAATTGTGTCGTTAAAACTGTCCGTTATAGGTCGTACGTCGAAAAGTA AAAGTGTAAAATCTTTATTTTCAGTTGTTCTTTTGGTTGTGGTTTGTGTG GAGCATGCGTATTGCGTTAAAACATTCCACGATGAAGAACTGCATTCGAA AATCCCGCTTCGTTTGAAACGTGAAATCGAAGAACTTGTTCACAAACAAC TTCATCAAACCATCTCATTGCATTACAATACAAATGATGACGTCATCAGC TTGTCACGTGATCCGATTATCAAAACGAATTTTCACCATCGAGCAAGAAG AGGTATTGGCCCGATTTCTTTCTGAAACAGTTTCTATTCAAATGTGTTCG AAAAACCAAACTATAGTGGGAACTCGTTTTAGTTTTAAACGAGAATCAAA ATTTCAATATAAGGAAGTAGAGATGGGAATAATTCTGGTCCAGCCAATGG AAAACAATGTCTCACCAAAGACCTTTTTCTACTGCTTNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGACTAATTGTATGACA TTTTATTTTAACTCAGATTTAGGTGACGGTATTGCTGGCAATGAAACAGT GTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAAGTGTGGTGGCG GAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTTGTTTGAATGAA GATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGTGTCTCTGGTAA GCGCTATATTTATTTTGTAATGTTTGTTTATATTTTCATAACCTGAAAAA TAAGAAAAAGGAAGAGATTGCATTTGCCTCGTTTCTGGATATAGCAGTAA TTTTATGTAATTTTTGCAATTTTCAATGAACACTTTATGATAAGCACAGC TTGAATTTAACTTTTCTTCGAAATTTCTCTTTGACAGGTTCATACGTCTT GGAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGACAGATGCCATCA CTATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTTGGCAAGTTGACC AGCACTGAGATCAAACTTTACAATTACGAACTCACCTCGTCGACATTCAA GTTTGCACAGAGCATCCAAGTTCAAGATGGCATCTCTTTCACAATCATGG AAACTGAACAATCAATCTACCTGGTGGTCCTGGAGAAGTTTTCCGGTCAT TATTTCGGTGTTTCCTCGAGAATGTACATGTATGATCCATCAAGACTCTC CGGAGGTGTCTTCCACACATATCAACCTATCTACTTCAAAGTTTACGATC CTTCAGCTGTTACCAGCCTCGAAATTTATGGCAAACCGTATTTAGCTGTT GTCAACAGGAAAAATAAAGGTGAATTAAATTGATACTTTTCCTTATGAGC ATTTATTTTGGCGTCCGGCGGTTGGTCAAAATACGATTAAGGGCGAATAT TTAATTTGGCGAATGGCAGAATTTGTATAATTTAGCGGGGATTTGATTTG GCTAATGAGAAAATTTAGACGCTTGCAAATCAAAAAATGATAGTTCTTAC TTAAGAAGGCTGATTTTTTTTCATGTACAAAATTTGGCGGGTATATAATA CAGATGAGATGAAGCTTTTATAAGATACTTTACTAATTAGTCATTTGAAT CGAAGTACTAAAAATGTCGCGTTCTTTAGAAAAAGTAACAATTGTTTTAT TACTGGTTAACGACCGACCAAATCAAATAAGAGCTTATAAAAACTCCATT TCGTCCCATATAATATGGCGGATTTTACTAAAACCCACTAAATCAAGATT TAAGCCCTGCCAAAAGTTCACTTAAGTATATCATGATACTTCAAAATAAA ATCACTCTTGTAATTTTGGACATATCTCGTATAATAGAATTTCATCTTAT ATGACCAAATAGGCCTGCTTCATTTTGGTTATTCGTGAAACTTCCATGTG AAATACTATCATTAAATTTATAAATCTGTAACAATTTTTTNTTGAATTGA ATTGACCAAAGACCTTTGTGCATTTTTTACGAAAGTTGATTGTAAGACTA ATTGTATGACATTTTATTTTAACTCAGATTTAGGTGACGGTATTGCTGGC AATGAAACAGTGTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAA GTGTGGTGGCGGAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTT GTTTGAATGAAGATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGT GTCTCTGGTAAGCGCTATATTTATTTTGTAATGTTTGTTTATATTTTCAT AACCTGAAAAATAAGAAAAAGGAAGAGATTGCATTTGCCTCGTTTCTGGA TATAGCAGTAATTTTATGTAATTTTTGCAATTTTCAATGAACACTTTATG ATAAGCACAGCTTGAATTTAACTTTTCTTCGAAATTTCTCTTTGACAGGT TCATACGTCTTGGAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGAC AGATGCCATCACTATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTTG GCAAGTTGACCAGCACTGAGATCAAACTTTACAATTACGAACTCACCTCG TCGACATTCAAGTTTGCACAGAGCATCCAANTAGTGAAATTTGTGAAGAT AAAGATACTTGTGTGGTGGAATCGAGAGTTTTGACACTTCTTGGTACAAG CACTGACCCATGCCCGTATACAAATAAATACCTCAAGATCGTCTATTCTT GCAGTTGTAAGTAAATGTTATCTAAACTTCCATTTTAAAGTACTAAAGAA ATTTGTAAACATACCGTATGCAGCGGGATACAAAATCAAAACCAATGTCA CATTGGTTTTTTTTTTGTTTCAATTGTTTTACAAGTTTGTTTTGGACACG TGATTTTAATTGTTCTCTTTAATGACACGTGATTCGCGCAATGTTTACAT TTTACTACATTCTTATCCCTTTAGTCTGAGGCAGATTTTGGATCGAAATT ATGCCTGTGGAAAGAAATCAACGATCCGAGCCTATGTGATCAGAAATTAA TAATAGGATGCTAAAACTCTTATAAGCGAAGAAAACTTCTGCCAGGACAA GTTATTCCATAAAACCTCTACATTTCCAATCGGTTGAACGATCATGGGAA AATCTATTTCATTCAATCTTTTTTTCTAGCATTATCTTACAGAAGTACAC CATACTTTTACGAATGGAACCATGTTGGATTAACCATCGTCCCTAGCGAC AACTTGATAACATATGGTGCTGAAGATGTAGAATCGTTTCATATCCATGG CAACGCTTTTGTAGCAGTTGCTAACCACATCAACGATCAACGACAATATC ATTTGGATTCTGAAATTTATGTTTTTGATTTGGCTAAACGACAGTAAGGA TTTTCATCGTTTTTAGCACTGGCTTGGAAAATAACTCAACATTGACAAAA ATGAAAATTGCATGAATAAGGCGATAAGAAAATTCAAAACATTGTNGGCA CTGGCTTGGAAAATAGCTCAAATTGACAGATATGAAAATTTCATGAATAA GGCGATAAGAAAATTCAAAACATTGTTCCATAAATTTGAATTTCGTCTAG TTTTCTTATTTATACTATACCTAAGGGAGGTAACTGTGGCTATTAATTAT TCTTATTATTAACTCTCGTCAATTTATTTCCCATCTTAGATTTCGAAGTT TCCAAAAATTACGAACAGATGGTGCAATTGATTTGGAGTTTTTCGTGATT GGTCGAGGCATAACACGTGAATATTTCCTCGCGGTTGCAAACCATGTCAA GGTTGTCCCTGGGCTCGGCAAAACGCACGAGGTTGACTCTATCATCTACA AATGGAACTGGAATTTGTTTGTTCCTTTTCAATGTATTAAAACGAACGGT GCCAAGAAATGGACTGCTGTTACTGGTACGTTGCTTACAATCTCAAATTT CAGTTCAAAAACAGCTCGTTCTTAGTTGCCTATAACTTATTTTGGAATCT TTCGTGGTCGACTTTAGGCTAAATCTTCTGAAAGGTATCTTCATCTTTCA ATTTCTTCTCATAACTTTATGATTTTCTCCGACGATTGCCTTTTCAATTC AAACCAATTTCAATCTGATTTAAACCATATCGATTGAGAGTTAAACTTGT GTTTATTTTTCTATATTTTGTTAGGTCAAAATGGCGAGTTCATATTAACA CACACCAATATGCATGGAAACGTCACCTTCTACAGTTACGATGGTTGGAG ATTTTACTTGACCAAGAAGCAGCCACAAGATCAGATCTTTCAACATTCTG CAACTACAACCTCCATCTCTATCAACACTCCTTCCTTCTCCACTAAGATG TTGGCAATACAACCAAAACCAGAGTTTGTTGATGACGTCAATAACATCTA CTCTTTCCAATTCAAACAAGTTTTTCCTAATTTTGACTTGTTGGAGACAT GTTTACAAACTGTCCAACAGATTAATCGAACCGTTTACAATGAACTGTTA CCACGTGCAAAGCAAGTGAACGAATCCTTCACGAAGATTAAAAATGATAT TGTACTTCTGGAGGATGTTATTTATTTGACAGGTAAATCTTAAGTCTAAC CTCTTTACACGTATAACAGATTTAATAGTGAGATGAAAAATTTTAAGACA AGCTCTACATAATATATACGAGGGTTTCACTACCTTACACGAAGAGTTTT CAAACATGGCAACTTAGATAAAAAGCAAAGCTCTATTGGAGAAAGGCTTA AATGGCTAAAAATCACCGAAATCGTAAAAAAAAGGCTGTAACTTTTCTGT TTCATTTTTTCAGAGAACAAGACTTTCACAGACCTCACAGTGAATGGAAA AACCAACTTGAACAATGCCACAATCAAGAACATCAAACTCTCCCAATCCG ATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCAGAAGACAAAC CAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAATCCTCGGTCAC ATATTCAACTGAACAAACGATTACTGGATTGAACAAATTTCAAAATGATG TCTATTTCAAGACATTGACTATAAATGGAAATGTATCCGTTGGCAATCTA ACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAATCTACATTAA CAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGCAATATCACAT TTGATTCCATCTCTGTCCAACACATCAACAATATTTCGACAACCAAGCTT CGATCAATCAACAAAGCATCCAACATCTCTGGACAACAGACTTTCCAAGA CTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTCAATGGCTTAG TTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATACNAAGGCTGTA ACTTTTCTGTTTCATTTTTTCAGAGAACAAGACTTTCACAGACCTCACAG TGAATGGAAAAACCAACTTGAACAATGCCACAATCAAGAACATCAAACTC TCCCAATCCGATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCA GAAGACAAACCAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAAT CCTCGGTCACATATTCAACTGAACAAACGATTACTGGATTGAACAAATTT CAAAATGATGTCTATTTCAAGACATTGACTATAAATGGAAATGTATCCGT TGGCAATCTAACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAA TCTACATTAACAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGC AATATCACATTTGATTCCATCTCTGTCCAACACATCAACAATATTTCGAC AACCAAGCTTCGATCAATCAACAAAGCATCCAACATCTCTGGACAACAGA CTTTCCAAGACTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTC AATGGCTTAGTTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATAC AGATCAAAACATTACTGCATTGCATCAATTTACAAACAAGACCACAATGC AACAGGATTTCCATATCCAGGGCCTGGTCAACAATATGGACATTTCTACT ATTGCTTCAGACACCTTAAAGAAGAATAAAGAAGACACAGTCACTGCATA TCAACGATTCTCCAGCATAGAAATCAAGGGAGATTTGAACATGGCGGACA AGAAGACAATTAATGATGTGGATGTCTCCAATCTCACTTCCAGTGGAATC TATCTGAACGCCGTCCAGGAATTTGGCAACATCGTATTCCAAAACAACGT CACTTTCAATGACCAAATATCGCTTGGTGAAACACTCAACAACGTCACAA TCGATGATTTGGTATTCACAGATCAAACAACTGTCTTTCATCATCCAATC ACATTCAAGCAAAATATCACATGTTCTGATCACGTGACCGTGGATGGAAA AATCAACAACCTCAATATTACTGGTTAGTCTTAATTTAATAAGATACTTT AGATTTTCGTGTGATTATCTGTAATTATCTTAACCCGTAGCGTAGATGCT TTAAAGTGCAGCACATTTTGTAAAATCACTCATTTAAACTTTACTCTGCA AAAGTTTCATTTTCATTCAAAGAACAAACTTAATCCATCACCATTGGAAA ATTTAAATATGTTTTTTAGAAACGGGTTGTTTATAACATTCTTTTAATAG GAATATCTTTGAAATTAATATAGTCGGGCTTAAAAGTAGACCAGTAACTG AAATCAATTACATTCTTATTATTCTAGAAGACATCATGGACGTTTCATCC AACCAAACCATTACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTC AAACAATCTTCAGGTCCATGATCATCTTGATGGAATTGACATCAATGCAT TTATCAAGAACGTTATGACTTACAATACAACTCAAAACGTAACTGCAACA AAATTNATCAGTTGTGATTCGACAAAACTCGACTATCCAGAATCTAACAA TCCTTGGTGACACATCCACCCATGCATTGAATGGATTGAATTTGACCGAC ATTGTTGGATCAGCCTTGATGAAAGATGGTGATCAAACTATCCATGGTGA TGTCTACGTAAATGAGCTTGTTATCAATGGTGATCTCAATATTACCAACC TTAACGGTCGTGACTTCTTGGAAGAAGTGATTCAGCTTAGCAACCCAGGA TCCATTTCATCTCACCAATTCTTCCAAGACGGTATCACAACACAGCAGTT GGTCACACAACTACTCAATGGTCAAAATCTAACAGAGTTTTTCAACAGNC CTGGTTAAACATCTTATTGAAACTTAAGGAAGAATCAATCCATAAAACCA ACGGACAGATATCTGTTAATGGAACTAAATCCTTCTCAGATGTTTTAATC CGTGGTAATCTCACTCTTAATGGTTTATTAGATGGTTTAGAATTCCCTGG TGATTTCTTGCAGCGATCCATTGATGAAGTGATCAATGGTACCTACACTT TCAACAACGTCACATTCGTCAAAAATATCACCGCTGATACGCTAAATGGT TACAATCTAACTGAACTCTACGAACGTGTTTTGAGGAAGGTTGGCCATGA ACAAATCGTCATCGCCAATTGGTCTTTCAATGATCACACTCACTTTGATG AACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATCTATCACGTGATGCA CTTTTAGCCAATCAGGATCATGTAATTTCTGGGGAAAAGACTTTCCATAA CGGTACCCACGCTAAACGTCTACTGGTGCATAACATGACAGTCAGTGGTC TGATTGATGGCGTCAATTTGACTCAATTGAATGAAGAACTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNATTAATATAGTCGGGCTTAAAAG TAGACCAGTAACTGAAATCAATTACATTCTTATTTTTCTAGAAGACATCA TGGACGTTTCATCCAACCAAACCATTACTGGCAACACCATTTTCACCAAG AATCTCCAAATGTCGAACAATCTTCAGGTCCATGATCATCTTGATGGAAT TGACATCAATGCATTTATCAAGAACGTTATGACTTACAATACAACTCAAA ACGTAACTGCAACAAAATTCTTCAGTAACTTGACCACAGATTCGATATGG TTCAACAACTGTACAGACCAACAATGTATCTGGTTAAACATCTTATTGAA ACTTAAGGAAGAATCAATCCATAAAACCAACGGACAGATATCAGTGAATG GAACAAAATCTTTCTCAGATGTTTTAATCCGCGGTAATCTCACTCTTAAT GGTTTATTAGATGGTTTAGAATTCCCTGGTGATTTCTTGCAGCGATCCAT TGATGAAGTGATCAATGGTACCTACACTTTCAACAACGTCACATTCGTCA AAAATATCACCGCTGATACGCTAAATGGTTACAATCTAACTGAACTCTAC GAACGTGTTTTGAGGAAGGTTGGCCATGAACAAATCGTCATCGCCAATTG GTCTTTCAATGATCACACTCACTTTGATGAACTTCAAGTTGATGGGTTGG TTGACGGAGTAAATCTATCACGTGATGCACTTTTAGCCAATCAGGATCAT GTAATTTCTGGGGAAAAGACTTTCCAAAACGGTACCCACGCTAAACGTCT ACTGGTGCATAACATGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGA CTCAATTGAATGAAGAACTGGTGACAACATTAGCAGATGACATCATTATC AAAGGGAAGAAGGTTTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAAC GGTGGGATTGATCGACGGTGTCAACATTTCAAAATTGAATGATCAAGCTA TGAAGCTGGATGAGGATCAAATTGTCACTGGAAAGAAGGTATGCACATTT AGAATTATCAAATAAATTTTTGAAAGAGCCTGAAGAATTTCATGAGCGTT CTTTCTTAATTTTCTTACAGCCATTCTTCGTAATCTTTATAAATGCTAAT AGTGGTGTAGCTCGAAATGGTGCTTAAAATACATTTAGTTCATTCAGTGA TTTCCTCACACTTTTCTTTTGATCACTTAAAGTAAAATCTCTGGCCCAAC CTTCATACTCTGTTGAAAATTCCTTCTAACAATTGAACAAAAGATTCAAT CAAAATTTGTTACATATATCGTGGGTCTACTCTTAGAAAAGTTTTCACCC TTTTTCAGATTTTCCAAGAGAAGATTGAAGTCTCGATGGAGAATCTCAAA GTTGGTGGTTTGATCAATGGAATCAATTTGACCGAACTTCTACAACAATC CATCAACAAGAACGAGCCATCAGTTGTGATTCGACAAAACTCGACTATCC AGAATCTAACAATCCGTGGTGACACATCCACCCATGCATTGAATGGATTG AATTTGACCGACATTGTTGGATCAGCCTTGATGAAAGATGGTGATCAAAC TATCCATGGTGATGTCTACGTAAATGAGCTTGTTATCAATGGCGATCTCA ATATTACCAACCTTAACGGTCGTGACTTCTTGGAAGAAGTGATTCAGCTT AGCAACCCAGGATCCATTTCATCTCACCAATTCTTCCAAGACGGTATCAC AACACAGCAGTTGGTCACACAACTACTCAATGGTCAAAATCTAACAGAGT TTTTCAACAGTATTGTCTTCATCGATCAAAACGCAACTATTACCGGCAAG AAGATTTTCACTTCAGAACTTCGCGTTGATCATCTGATTGCTCATAGTTT AATCAACTCCAAGAATCTGACAGAGCTGATGGCAACGACCCTATTGAAGC AAGGCAACCAATCAATCCACATACCAACTACATTCAGTCACGTGATTCTA CAACAGGATTCTGATCTCATTTCGCTTAATCAACATTCAAACGTATCAAC ATTCGAAAAAGAAATCTTGTACAAATGCGAAGGACCTAAAAGACACGTGG TCGGTAACCATGTATACCAGAAAGCAGAATTCGGACAAAGATCGACTATC GGACACGTCAAGGCTCAAGGATTAGTCAATGGATTAAATATTTCATCCCT GGAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGTATCGTTGGTAAGA AGACCATGAAANAAACGGTACCCACGCTAAACGTCTACTGGTGCATAACA TGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGACTCAATTGAATGAA GAACTGGTGACAACATTAGCAGATGACATCATTATCAAAGGGAAGAAGGT TTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCG ACGGNTAACAACCTGTACGTAGAGAAGATCAACAATTATTCATTCCCTGG TGATTTTGTTCAAATTAGAGATGATGAAAATATCACAATAACTGGCATAA AGACATTTTCAAACGACACCATAATCACCAATGACTTGATAATGTCACCA AACAGCACTATCAATGGATTCGACCTATCAGAGATCGCAAAGGAGATTGT CACTATTCATGAAAACGTTTCCATAGAAACTGATGTTGTGTTTAAAAATC CAGTGAATTTGTCACAGAATCTTGAAGTTGGACTTTTGAATCAAGTGAAT ATCTCGTCGGAAGAGTTGCTGTTGAAATCAACCAATCAAAAAGTGACAGG TCATAAACACATACTGAAGTTGGAAGTTCAAGGAGATGTCATAACTCCAA ACCATATCAATGGAGTGGACGTACAGAAGATGTACAACGAATCNATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002302XLOC_002302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004146-exon-sc0000039-1575043694:683691..683731TCONS_00004146-exon-sc0000039-1575043694:683691..683731Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:682780..683007TCONS_00004146-exon-sc0000039-1575043694:682780..683007Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:681686..681865TCONS_00004146-exon-sc0000039-1575043694:681686..681865Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:679676..679983TCONS_00004146-exon-sc0000039-1575043694:679676..679983Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:679039..679252TCONS_00004146-exon-sc0000039-1575043694:679039..679252Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:678507..678742TCONS_00004146-exon-sc0000039-1575043694:678507..678742Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:677850..678257TCONS_00004146-exon-sc0000039-1575043694:677850..678257Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:675959..677008TCONS_00004146-exon-sc0000039-1575043694:675959..677008Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:674648..675654TCONS_00004146-exon-sc0000039-1575043694:674648..675654Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1575043694:670285..670882TCONS_00004146-exon-sc0000039-1575043694:670285..670882Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:683691..683731TCONS_00004146-exon-sc0000039-1510915933:683691..683731Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:682780..683007TCONS_00004146-exon-sc0000039-1510915933:682780..683007Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:681686..681865TCONS_00004146-exon-sc0000039-1510915933:681686..681865Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:679676..679983TCONS_00004146-exon-sc0000039-1510915933:679676..679983Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:679039..679252TCONS_00004146-exon-sc0000039-1510915933:679039..679252Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:678507..678742TCONS_00004146-exon-sc0000039-1510915933:678507..678742Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:677850..678257TCONS_00004146-exon-sc0000039-1510915933:677850..678257Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:675959..677008TCONS_00004146-exon-sc0000039-1510915933:675959..677008Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:674648..675654TCONS_00004146-exon-sc0000039-1510915933:674648..675654Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1510915933:670285..670882TCONS_00004146-exon-sc0000039-1510915933:670285..670882Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:683691..683731TCONS_00004146-exon-sc0000039-1491911889:683691..683731Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:682780..683007TCONS_00004146-exon-sc0000039-1491911889:682780..683007Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:681686..681865TCONS_00004146-exon-sc0000039-1491911889:681686..681865Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:679676..679983TCONS_00004146-exon-sc0000039-1491911889:679676..679983Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:679039..679252TCONS_00004146-exon-sc0000039-1491911889:679039..679252Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:678507..678742TCONS_00004146-exon-sc0000039-1491911889:678507..678742Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:677850..678257TCONS_00004146-exon-sc0000039-1491911889:677850..678257Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:675959..677008TCONS_00004146-exon-sc0000039-1491911889:675959..677008Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:674648..675654TCONS_00004146-exon-sc0000039-1491911889:674648..675654Clytia hemisphaericaexon
TCONS_00004146-exon-sc0000039-1491911889:670285..670882TCONS_00004146-exon-sc0000039-1491911889:670285..670882Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:670285..683731 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
207.833 209.303 123.92 74.4199 0.334667 0.391004 0.135409 0 0.10776 0.402678 0.252823 0.14621 0.0306145 0 0 0.00535864 0.00432829 0.053587 0.0370573 0.122891 0.32476 0.143192 31.414 43.6007 0.122736 0.118703 0.0562276 0.408209 40.2752 41.7069
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004146 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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