TCONS_00004142 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004142
Unique NameTCONS_00004142
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5150

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004142 ID=TCONS_00004142|Name=TCONS_00004142|organism=Clytia hemisphaerica|type=transcript|length=5150bp
AGACAGTGTGTTGAAATGGAAGTCAAAAGCATCTTGAAATtTGTTCTTTT
GGTTGTGGTTTGTGTGGAGCATGCGTATTGCGTTAAAACATTCCACGATG
AAGAACTGCATTCGAAAATCCCGCTTCGTTTGAAACGTGAAATCGAAGAA
CTTGTTCACAAACAACTTCATCAAACCATCTCATTGCATTACAAtacaaa
tgatgacgtcatcagcttgTCACGTGATCCGATTATCAAAACGAATTTTC
ACCATCGAGCAAGAAGAGATTTAGGTGACGGTATTGCTGGCAATGAAACA
GTGTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAAGTGTGGTGG
CGGAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTTGTTTGAATG
AAGATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGTGTCTCTGGT
TCATACGTCTTGGAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGAC
AGATGCCATCACTATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTTG
GCAAGTTGACCAGCACTGAGATCAAACTTTACAATTACGAACTCACCTCG
TCGACATTCAAGTTTGCACAGAGCATCCAANTAGTGAAATTTGTGAAGAT
AAAGATACTTGTGTGGTGGAATCGAGAGTTTTGACACTTCTTGGTACAAG
CACTGACCCATGCCCGTATACAAATAAATACCTCAAGATCGTCTATTCTT
GCAGTTCATTATCTTACAGAAGTACACCATACTTTTACGAATGGAACCAT
GTTGGATTAACCATCGTCCCTAGCGACAACTTGATAACATATGGTGCTGA
AGATGTAGAATCGTTTCATATCCATGGCAACGCTTTTGTAGCAGTTGCTA
ACCACATCAACGATCAACGACAATATCATTTGGATTCTGaaatttatgtt
tttgattTGGCTAAACGACAATTTCGAAGTTTCCAAAAATTACGAACAGA
TGGTGCAATTGATTTGGAGTTTTTCGTGATTGGTCGAGGCATAACACGTG
AATATTTCCTCGCGGTTGCAAACCATGTCAAGGTTGTCCCTGGGCTCGGC
AAAACGCACGAGGTTGACTCTATCATCTACAAATGGAACTGGAATTTGTT
TGTTCCTTTTCAATGTATTAAAACGAACGGTGCCAAGAAATGGACTGCTG
TTACTGGTCAAAATGGCGAGTTCATATTAACACACACCAATATGCATGGA
AACGTCACCTTCTACAGTTACGATGGTTGGAGATTTTACTTGACCAAGAA
GCAGCCACAAGATCAGATCTTTCAACATTCTGCAACTACAACCTCCATCT
CTATCAACACTCCTTCCTTCTCCACTAAGATGTTGGCAATACAACCAAAA
CCAGAGTTTGTTGATGACGTCAATAACATCTACTCTTTCCAATTCAAAca
agtttttcctaattttgacTTGTTGGAGACATGTTTACAAACTGTCCAAC
AGATTAATCGAACCGTTTACAATGAACTGTTACCACGTGCAAAGCAAGTG
AACGAATCCTTCACGAAGATTAAAAATGATATTGTACTTCTGGAGGATGT
TATTTATTTGACAGagAACAAGACTTTCACAGACCTCACAGTGAATGGAA
AAACCAACTTGAACAATGCCACAATCAAGAACATCAAACTCTCCCAATCC
GATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCAGAAGACAAA
CCAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAATCCTCGGTCA
CATATTCAACTGAACAAACGATTACTGGATtgaacaaatttcaaaatgat
gTCTATTTCAAGACATTGACTATAAATGGAAATGTATCCGTTGGCAATCT
AACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAATCTACATTA
ACAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGCAATATCACA
TTTGATTCCATCTCTGTCCAACACATCAACAATATTTCGACAACCAAGCT
TCGATCAATCAACAAAGCATCCAACATCTCTGGACAACAGACTTTCCAAG
ACTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTCAATGGCTTA
GTTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATACAGATCAAAA
CATTACTGCATTGCATCAATTTACAAACAAGACCACAATGCAACAGGATT
TCCATATCCAGGGCCTGGTCAACAATATGGACATTTCTACTATTGCTTCA
GACACCTTAAAGAAGAATAAAGAAGACACAGTCACTGCATATCAACGATT
CTCCAGCATAGAAATCAAGGGAGATTTGAACATGGCGGACAAGAAGACAA
TTAATGATGTGGATGTCTCCAATCTCACTTCCAGTGGAATCTATCTGAAC
GCCGTCCAGGAATTTGGCAACATCGTATTCCAAAACAACGTCACTTTCAA
TGACCAAATATCGCTTGGTGAAACACTCAACAACGTCACAATCGATGATT
TGGTATTCACAGATCAAACAACTGTCTTTCATCATCCAATCACATTCAAG
CAAAATATCACATGTTCTGATCACGTGACCGTGGATGGAAAAATCAACAA
CCTCAATATTACTGAAGACATCATGGACGTTTCATCCAACCAAACCATTA
CTGGCAACACCATTTTCACCAAGAATCTCCAAATGTCGAACAATCTTCAG
GTCCATGATCATCTTGATGGAATTGACATCAATGCATTTATCAAGAACGT
TATGACTTACAATACAACTCAAAACGTAACTGCAACAAAATTCTTCAGTA
ACTTGACCACAGATTCGATATGGTTCAACAACTGTACAGACCAACAATGT
ATCTGGTTAAACATCTTATTGAAACTTAAGGAAGAATCAATCCATAAAAC
CAACGGACAGATATCAGTGAATGGAACAAAATCTTTCTCAGATGTTTTAA
TCCGCGGTAATCTCACTCTTAATGGTTTATTAGATGGTTTAGAATTCCCT
GGTGATTTCTTGCAGCGATCCATTGATGAAGTGATCAATGGTACCTACAC
TTTCAACAACGTCACATTCGTCAAAAATATCACCGCTGATACGCTAAATG
GTTACAATCTAACTGAACTCTACGAACGTGTTTTGAGGAAGGTTGGCCAT
GAACAAATCGTCATCGCCAATTGGTCTTTCAATGATCACACTCACTTTGA
TGAACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATCTATCACGTGATG
CACTTTTAGCCAATCAGGATCATGTAATTTCTGGGGAAAAGACTTTCCAA
AACGGTACCCACGCTAAACGTCTACTGGTGCATAACATGACAGTCAGTGG
TCTGATTGATGGCGTCAATTTGACTCAATTGAATGAAGAACTGGTGACAA
CATTAGCAGATGACATCATTATCAAAGGGAAGAAGGTTTTCCAAAACCAC
GTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCGACGGTGTcaacat
ttcaaaattgaatGATCAAGCTATGAAGCTGGATGAGGATCAAATTGTCA
CTGGAAAGAAGattttccaagagAAGATTGAAGTCTCGATGGAGAATCTC
AAAGTTGGTGGTTTGATCAATGGAATCAATTTGACCGAACTTCTACAACA
ATCCATCAACAAGAACGAGCCATCAGTTGTGATTCGACAAAACTCGACTA
TCCAGAATCTAACAATCCGTGGTGACACATCCACCCATGCATTGAATGGA
TTGAATTTGACCGACATTGTTGGATCAGCCTTGATGAAAGATGGTGATCA
AACTATCCATGGTGATGTCTACGTAAATGAGCTTGTTATCAATGGCGATC
TCAATATTACCAACCTTAACGGTCGTGACTTCTTGGAAGAAGTGATTCAG
CTTAGCAACCCAGGATCCATTTCATCTCACCAATTCTTCCAAGACGGTAT
CACAACACAGCAGTTGGTCACACAACTACTCAATGGTCAAAATCTAACAG
AGTTTTTCAACAGTATTGTCTTCATCGATCAAAACGCAACTATTACCGGC
AAGAAGATTTTCACTTCAGAACTTCGCGTTGATCATCTGATTGCTCATAG
TTTAATCAACTCCAAGAATCTGACAGAGCTGATGGCAACGACCCTATTGA
AGCAAGGCAACCAATCAATCCACATACCAACTACATTCAGTCACGTGATT
CTACAACAGGATTCTGATCTCATTTCGCTTAATCAACATTCAAACGTATC
aacattcgaaaaagaaatcttgTACAAATGCGAAGGACCTAAAAGACACG
TGGTCGGTAACCATGTATACCAGAAAGCAGAATTCGGACAAAGATCGACT
ATCGGACACGTCAAGGCTCAAGGATTAGTCAATGGATTAAATATTTCATC
CCTGGAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGTATCGTTGGTA
AGAAGACCATGAAANAAACGGTACCCACGCTAAACGTCTACTGGTGCATA
ACATGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGACTCAATTGAAT
GAAGAACTGGTGACAACATTAGCAGATGACATCATTATCAAAGGGAAGAA
GGTTTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGA
TCGACGGNTAACAACCTGTACGTAGAGAAGATCAACAATTATTCATTCCC
TGGTGATTTTGTTCAAATTAGAGATGATGAAAATATCACAATAACTGGCA
TAAAGACATTTTCAAACGACACCATAATCACCAATGACTTGATAATGTCA
CCAAACAGCACTATCAATGGATTCGACCTATCAGAGATCGCAAAGGAGAT
TGTCACTATTCATGAAAACGTTTCCATAGAAACTGATGTTGTGTTTAAAA
ATCCAGTGAATTTGTCACAGAATCTTGAAGTTGGACTTTTGAATCAAGTG
AATATCTCGTCGGAAGAGTTGCTGTtgaaatcaaccaatcaaaaagTGAC
AGGTCATAAACACATACTGAAGTTGGAAGTTCAAGGAGATGTCATAACTC
CAAACCATATCAATGGAGTGGACGTACAGAAGATGTACAACGAATCNATC
Run BLAST on NCBI

transcript from alignment at sc0000039:670285..683730-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004142 ID=TCONS_00004142|Name=TCONS_00004142|organism=Clytia hemisphaerica|type=transcript|length=13446bp|location=Sequence derived from alignment at sc0000039:670285..683730- (Clytia hemisphaerica)
AGACAGTGTGTTGAAATGGAAGTCAAAAGCATCTTGAAATGTAAGTTTAG
CTTTCTACCTTTTTATATATGCCTGGCCTTTAGTTTGTTCAGATTTGATC
AATATTTATCCGAAAGATGAACCTTTTTTCTAATATTTAAAGAAAGATCA
ATTTGCTTTTTTTTAATGTCAGATTTTGAGATTATCACCTTGGATTAAGT
GAAATGTTAACTGTTTTCTACGAACACGATAATACAAGGCTTAGGATTAA
ATTTTGTTCAATCAAATTTTATCCCGTGTCAGGAGTTCAATCTTGTTTAC
TGTCAAGATTTTTAAATGTCCCATCAAGGGTAGAATAAGCAATTTTTTTC
CTCAGTCGCAACAAGGGTTACCCAAATGAATCTTGTGAACTTGAGATAAC
AAAGTTTTTGGGCCTCGATTTATCCTCATTTACAGTAAACAAGGTATGGA
TATGTGCTGTGTTCGAACCGAAAAAAAAGCTACGGTTTGGAAGCTTTTTA
TATCCATTGTATTGGTTCTAGCTTGGACTTGCGTTGAAAAATTAGATTGT
TTTCCTAGAGTTATATTTCATTGAAAATTCGGGATCGATTTTTCTTTTTT
TAGAGTATAAATGCGAAAACTCAACTCCTATTGAATATTAGCCATTAAAT
TGAATTGTGTCGTTAAAACTGTCCGTTATAGGTCGTACGTCGAAAAGTAA
AAGTGTAAAATCTTTATTTTCAGTTGTTCTTTTGGTTGTGGTTTGTGTGG
AGCATGCGTATTGCGTTAAAACATTCCACGATGAAGAACTGCATTCGAAA
ATCCCGCTTCGTTTGAAACGTGAAATCGAAGAACTTGTTCACAAACAACT
TCATCAAACCATCTCATTGCATTACAATACAAATGATGACGTCATCAGCT
TGTCACGTGATCCGATTATCAAAACGAATTTTCACCATCGAGCAAGAAGA
GGTATTGGCCCGATTTCTTTCTGAAACAGTTTCTATTCAAATGTGTTCGA
AAAACCAAACTATAGTGGGAACTCGTTTTAGTTTTAAACGAGAATCAAAA
TTTCAATATAAGGAAGTAGAGATGGGAATAATTCTGGTCCAGCCAATGGA
AAACAATGTCTCACCAAAGACCTTTTTCTACTGCTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGACTAATTGTATGACAT
TTTATTTTAACTCAGATTTAGGTGACGGTATTGCTGGCAATGAAACAGTG
TATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAAGTGTGGTGGCGG
AATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTTGTTTGAATGAAG
ATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGTGTCTCTGGTAAG
CGCTATATTTATTTTGTAATGTTTGTTTATATTTTCATAACCTGAAAAAT
AAGAAAAAGGAAGAGATTGCATTTGCCTCGTTTCTGGATATAGCAGTAAT
TTTATGTAATTTTTGCAATTTTCAATGAACACTTTATGATAAGCACAGCT
TGAATTTAACTTTTCTTCGAAATTTCTCTTTGACAGGTTCATACGTCTTG
GAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGACAGATGCCATCAC
TATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTTGGCAAGTTGACCA
GCACTGAGATCAAACTTTACAATTACGAACTCACCTCGTCGACATTCAAG
TTTGCACAGAGCATCCAAGTTCAAGATGGCATCTCTTTCACAATCATGGA
AACTGAACAATCAATCTACCTGGTGGTCCTGGAGAAGTTTTCCGGTCATT
ATTTCGGTGTTTCCTCGAGAATGTACATGTATGATCCATCAAGACTCTCC
GGAGGTGTCTTCCACACATATCAACCTATCTACTTCAAAGTTTACGATCC
TTCAGCTGTTACCAGCCTCGAAATTTATGGCAAACCGTATTTAGCTGTTG
TCAACAGGAAAAATAAAGGTGAATTAAATTGATACTTTTCCTTATGAGCA
TTTATTTTGGCGTCCGGCGGTTGGTCAAAATACGATTAAGGGCGAATATT
TAATTTGGCGAATGGCAGAATTTGTATAATTTAGCGGGGATTTGATTTGG
CTAATGAGAAAATTTAGACGCTTGCAAATCAAAAAATGATAGTTCTTACT
TAAGAAGGCTGATTTTTTTTCATGTACAAAATTTGGCGGGTATATAATAC
AGATGAGATGAAGCTTTTATAAGATACTTTACTAATTAGTCATTTGAATC
GAAGTACTAAAAATGTCGCGTTCTTTAGAAAAAGTAACAATTGTTTTATT
ACTGGTTAACGACCGACCAAATCAAATAAGAGCTTATAAAAACTCCATTT
CGTCCCATATAATATGGCGGATTTTACTAAAACCCACTAAATCAAGATTT
AAGCCCTGCCAAAAGTTCACTTAAGTATATCATGATACTTCAAAATAAAA
TCACTCTTGTAATTTTGGACATATCTCGTATAATAGAATTTCATCTTATA
TGACCAAATAGGCCTGCTTCATTTTGGTTATTCGTGAAACTTCCATGTGA
AATACTATCATTAAATTTATAAATCTGTAACAATTTTTTNTTGAATTGAA
TTGACCAAAGACCTTTGTGCATTTTTTACGAAAGTTGATTGTAAGACTAA
TTGTATGACATTTTATTTTAACTCAGATTTAGGTGACGGTATTGCTGGCA
ATGAAACAGTGTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCAAG
TGTGGTGGCGGAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACTTG
TTTGAATGAAGATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTGTG
TCTCTGGTAAGCGCTATATTTATTTTGTAATGTTTGTTTATATTTTCATA
ACCTGAAAAATAAGAAAAAGGAAGAGATTGCATTTGCCTCGTTTCTGGAT
ATAGCAGTAATTTTATGTAATTTTTGCAATTTTCAATGAACACTTTATGA
TAAGCACAGCTTGAATTTAACTTTTCTTCGAAATTTCTCTTTGACAGGTT
CATACGTCTTGGAAGGGATTTCCGCAGATTGGATACTCCGAGATTTGACA
GATGCCATCACTATCAAATTCTTTGTTCTACTGAATAAAATCTTCCTTGG
CAAGTTGACCAGCACTGAGATCAAACTTTACAATTACGAACTCACCTCGT
CGACATTCAAGTTTGCACAGAGCATCCAANTAGTGAAATTTGTGAAGATA
AAGATACTTGTGTGGTGGAATCGAGAGTTTTGACACTTCTTGGTACAAGC
ACTGACCCATGCCCGTATACAAATAAATACCTCAAGATCGTCTATTCTTG
CAGTTGTAAGTAAATGTTATCTAAACTTCCATTTTAAAGTACTAAAGAAA
TTTGTAAACATACCGTATGCAGCGGGATACAAAATCAAAACCAATGTCAC
ATTGGTTTTTTTTTTGTTTCAATTGTTTTACAAGTTTGTTTTGGACACGT
GATTTTAATTGTTCTCTTTAATGACACGTGATTCGCGCAATGTTTACATT
TTACTACATTCTTATCCCTTTAGTCTGAGGCAGATTTTGGATCGAAATTA
TGCCTGTGGAAAGAAATCAACGATCCGAGCCTATGTGATCAGAAATTAAT
AATAGGATGCTAAAACTCTTATAAGCGAAGAAAACTTCTGCCAGGACAAG
TTATTCCATAAAACCTCTACATTTCCAATCGGTTGAACGATCATGGGAAA
ATCTATTTCATTCAATCTTTTTTTCTAGCATTATCTTACAGAAGTACACC
ATACTTTTACGAATGGAACCATGTTGGATTAACCATCGTCCCTAGCGACA
ACTTGATAACATATGGTGCTGAAGATGTAGAATCGTTTCATATCCATGGC
AACGCTTTTGTAGCAGTTGCTAACCACATCAACGATCAACGACAATATCA
TTTGGATTCTGAAATTTATGTTTTTGATTTGGCTAAACGACAGTAAGGAT
TTTCATCGTTTTTAGCACTGGCTTGGAAAATAACTCAACATTGACAAAAA
TGAAAATTGCATGAATAAGGCGATAAGAAAATTCAAAACATTGTNGGCAC
TGGCTTGGAAAATAGCTCAAATTGACAGATATGAAAATTTCATGAATAAG
GCGATAAGAAAATTCAAAACATTGTTCCATAAATTTGAATTTCGTCTAGT
TTTCTTATTTATACTATACCTAAGGGAGGTAACTGTGGCTATTAATTATT
CTTATTATTAACTCTCGTCAATTTATTTCCCATCTTAGATTTCGAAGTTT
CCAAAAATTACGAACAGATGGTGCAATTGATTTGGAGTTTTTCGTGATTG
GTCGAGGCATAACACGTGAATATTTCCTCGCGGTTGCAAACCATGTCAAG
GTTGTCCCTGGGCTCGGCAAAACGCACGAGGTTGACTCTATCATCTACAA
ATGGAACTGGAATTTGTTTGTTCCTTTTCAATGTATTAAAACGAACGGTG
CCAAGAAATGGACTGCTGTTACTGGTACGTTGCTTACAATCTCAAATTTC
AGTTCAAAAACAGCTCGTTCTTAGTTGCCTATAACTTATTTTGGAATCTT
TCGTGGTCGACTTTAGGCTAAATCTTCTGAAAGGTATCTTCATCTTTCAA
TTTCTTCTCATAACTTTATGATTTTCTCCGACGATTGCCTTTTCAATTCA
AACCAATTTCAATCTGATTTAAACCATATCGATTGAGAGTTAAACTTGTG
TTTATTTTTCTATATTTTGTTAGGTCAAAATGGCGAGTTCATATTAACAC
ACACCAATATGCATGGAAACGTCACCTTCTACAGTTACGATGGTTGGAGA
TTTTACTTGACCAAGAAGCAGCCACAAGATCAGATCTTTCAACATTCTGC
AACTACAACCTCCATCTCTATCAACACTCCTTCCTTCTCCACTAAGATGT
TGGCAATACAACCAAAACCAGAGTTTGTTGATGACGTCAATAACATCTAC
TCTTTCCAATTCAAACAAGTTTTTCCTAATTTTGACTTGTTGGAGACATG
TTTACAAACTGTCCAACAGATTAATCGAACCGTTTACAATGAACTGTTAC
CACGTGCAAAGCAAGTGAACGAATCCTTCACGAAGATTAAAAATGATATT
GTACTTCTGGAGGATGTTATTTATTTGACAGGTAAATCTTAAGTCTAACC
TCTTTACACGTATAACAGATTTAATAGTGAGATGAAAAATTTTAAGACAA
GCTCTACATAATATATACGAGGGTTTCACTACCTTACACGAAGAGTTTTC
AAACATGGCAACTTAGATAAAAAGCAAAGCTCTATTGGAGAAAGGCTTAA
ATGGCTAAAAATCACCGAAATCGTAAAAAAAAGGCTGTAACTTTTCTGTT
TCATTTTTTCAGAGAACAAGACTTTCACAGACCTCACAGTGAATGGAAAA
ACCAACTTGAACAATGCCACAATCAAGAACATCAAACTCTCCCAATCCGA
TCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCAGAAGACAAACC
AAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAATCCTCGGTCACA
TATTCAACTGAACAAACGATTACTGGATTGAACAAATTTCAAAATGATGT
CTATTTCAAGACATTGACTATAAATGGAAATGTATCCGTTGGCAATCTAA
CCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAATCTACATTAAC
AAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGCAATATCACATT
TGATTCCATCTCTGTCCAACACATCAACAATATTTCGACAACCAAGCTTC
GATCAATCAACAAAGCATCCAACATCTCTGGACAACAGACTTTCCAAGAC
TTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTCAATGGCTTAGT
TGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATACNAAGGCTGTAA
CTTTTCTGTTTCATTTTTTCAGAGAACAAGACTTTCACAGACCTCACAGT
GAATGGAAAAACCAACTTGAACAATGCCACAATCAAGAACATCAAACTCT
CCCAATCCGATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCCAG
AAGACAAACCAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAATC
CTCGGTCACATATTCAACTGAACAAACGATTACTGGATTGAACAAATTTC
AAAATGATGTCTATTTCAAGACATTGACTATAAATGGAAATGTATCCGTT
GGCAATCTAACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCAAT
CTACATTAACAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAGCA
ATATCACATTTGATTCCATCTCTGTCCAACACATCAACAATATTTCGACA
ACCAAGCTTCGATCAATCAACAAAGCATCCAACATCTCTGGACAACAGAC
TTTCCAAGACTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGTCA
ATGGCTTAGTTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATACA
GATCAAAACATTACTGCATTGCATCAATTTACAAACAAGACCACAATGCA
ACAGGATTTCCATATCCAGGGCCTGGTCAACAATATGGACATTTCTACTA
TTGCTTCAGACACCTTAAAGAAGAATAAAGAAGACACAGTCACTGCATAT
CAACGATTCTCCAGCATAGAAATCAAGGGAGATTTGAACATGGCGGACAA
GAAGACAATTAATGATGTGGATGTCTCCAATCTCACTTCCAGTGGAATCT
ATCTGAACGCCGTCCAGGAATTTGGCAACATCGTATTCCAAAACAACGTC
ACTTTCAATGACCAAATATCGCTTGGTGAAACACTCAACAACGTCACAAT
CGATGATTTGGTATTCACAGATCAAACAACTGTCTTTCATCATCCAATCA
CATTCAAGCAAAATATCACATGTTCTGATCACGTGACCGTGGATGGAAAA
ATCAACAACCTCAATATTACTGGTTAGTCTTAATTTAATAAGATACTTTA
GATTTTCGTGTGATTATCTGTAATTATCTTAACCCGTAGCGTAGATGCTT
TAAAGTGCAGCACATTTTGTAAAATCACTCATTTAAACTTTACTCTGCAA
AAGTTTCATTTTCATTCAAAGAACAAACTTAATCCATCACCATTGGAAAA
TTTAAATATGTTTTTTAGAAACGGGTTGTTTATAACATTCTTTTAATAGG
AATATCTTTGAAATTAATATAGTCGGGCTTAAAAGTAGACCAGTAACTGA
AATCAATTACATTCTTATTATTCTAGAAGACATCATGGACGTTTCATCCA
ACCAAACCATTACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTCA
AACAATCTTCAGGTCCATGATCATCTTGATGGAATTGACATCAATGCATT
TATCAAGAACGTTATGACTTACAATACAACTCAAAACGTAACTGCAACAA
AATTNATCAGTTGTGATTCGACAAAACTCGACTATCCAGAATCTAACAAT
CCTTGGTGACACATCCACCCATGCATTGAATGGATTGAATTTGACCGACA
TTGTTGGATCAGCCTTGATGAAAGATGGTGATCAAACTATCCATGGTGAT
GTCTACGTAAATGAGCTTGTTATCAATGGTGATCTCAATATTACCAACCT
TAACGGTCGTGACTTCTTGGAAGAAGTGATTCAGCTTAGCAACCCAGGAT
CCATTTCATCTCACCAATTCTTCCAAGACGGTATCACAACACAGCAGTTG
GTCACACAACTACTCAATGGTCAAAATCTAACAGAGTTTTTCAACAGNCC
TGGTTAAACATCTTATTGAAACTTAAGGAAGAATCAATCCATAAAACCAA
CGGACAGATATCTGTTAATGGAACTAAATCCTTCTCAGATGTTTTAATCC
GTGGTAATCTCACTCTTAATGGTTTATTAGATGGTTTAGAATTCCCTGGT
GATTTCTTGCAGCGATCCATTGATGAAGTGATCAATGGTACCTACACTTT
CAACAACGTCACATTCGTCAAAAATATCACCGCTGATACGCTAAATGGTT
ACAATCTAACTGAACTCTACGAACGTGTTTTGAGGAAGGTTGGCCATGAA
CAAATCGTCATCGCCAATTGGTCTTTCAATGATCACACTCACTTTGATGA
ACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATCTATCACGTGATGCAC
TTTTAGCCAATCAGGATCATGTAATTTCTGGGGAAAAGACTTTCCATAAC
GGTACCCACGCTAAACGTCTACTGGTGCATAACATGACAGTCAGTGGTCT
GATTGATGGCGTCAATTTGACTCAATTGAATGAAGAACTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNATTAATATAGTCGGGCTTAAAAGT
AGACCAGTAACTGAAATCAATTACATTCTTATTTTTCTAGAAGACATCAT
GGACGTTTCATCCAACCAAACCATTACTGGCAACACCATTTTCACCAAGA
ATCTCCAAATGTCGAACAATCTTCAGGTCCATGATCATCTTGATGGAATT
GACATCAATGCATTTATCAAGAACGTTATGACTTACAATACAACTCAAAA
CGTAACTGCAACAAAATTCTTCAGTAACTTGACCACAGATTCGATATGGT
TCAACAACTGTACAGACCAACAATGTATCTGGTTAAACATCTTATTGAAA
CTTAAGGAAGAATCAATCCATAAAACCAACGGACAGATATCAGTGAATGG
AACAAAATCTTTCTCAGATGTTTTAATCCGCGGTAATCTCACTCTTAATG
GTTTATTAGATGGTTTAGAATTCCCTGGTGATTTCTTGCAGCGATCCATT
GATGAAGTGATCAATGGTACCTACACTTTCAACAACGTCACATTCGTCAA
AAATATCACCGCTGATACGCTAAATGGTTACAATCTAACTGAACTCTACG
AACGTGTTTTGAGGAAGGTTGGCCATGAACAAATCGTCATCGCCAATTGG
TCTTTCAATGATCACACTCACTTTGATGAACTTCAAGTTGATGGGTTGGT
TGACGGAGTAAATCTATCACGTGATGCACTTTTAGCCAATCAGGATCATG
TAATTTCTGGGGAAAAGACTTTCCAAAACGGTACCCACGCTAAACGTCTA
CTGGTGCATAACATGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGAC
TCAATTGAATGAAGAACTGGTGACAACATTAGCAGATGACATCATTATCA
AAGGGAAGAAGGTTTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAACG
GTGGGATTGATCGACGGTGTCAACATTTCAAAATTGAATGATCAAGCTAT
GAAGCTGGATGAGGATCAAATTGTCACTGGAAAGAAGGTATGCACATTTA
GAATTATCAAATAAATTTTTGAAAGAGCCTGAAGAATTTCATGAGCGTTC
TTTCTTAATTTTCTTACAGCCATTCTTCGTAATCTTTATAAATGCTAATA
GTGGTGTAGCTCGAAATGGTGCTTAAAATACATTTAGTTCATTCAGTGAT
TTCCTCACACTTTTCTTTTGATCACTTAAAGTAAAATCTCTGGCCCAACC
TTCATACTCTGTTGAAAATTCCTTCTAACAATTGAACAAAAGATTCAATC
AAAATTTGTTACATATATCGTGGGTCTACTCTTAGAAAAGTTTTCACCCT
TTTTCAGATTTTCCAAGAGAAGATTGAAGTCTCGATGGAGAATCTCAAAG
TTGGTGGTTTGATCAATGGAATCAATTTGACCGAACTTCTACAACAATCC
ATCAACAAGAACGAGCCATCAGTTGTGATTCGACAAAACTCGACTATCCA
GAATCTAACAATCCGTGGTGACACATCCACCCATGCATTGAATGGATTGA
ATTTGACCGACATTGTTGGATCAGCCTTGATGAAAGATGGTGATCAAACT
ATCCATGGTGATGTCTACGTAAATGAGCTTGTTATCAATGGCGATCTCAA
TATTACCAACCTTAACGGTCGTGACTTCTTGGAAGAAGTGATTCAGCTTA
GCAACCCAGGATCCATTTCATCTCACCAATTCTTCCAAGACGGTATCACA
ACACAGCAGTTGGTCACACAACTACTCAATGGTCAAAATCTAACAGAGTT
TTTCAACAGTATTGTCTTCATCGATCAAAACGCAACTATTACCGGCAAGA
AGATTTTCACTTCAGAACTTCGCGTTGATCATCTGATTGCTCATAGTTTA
ATCAACTCCAAGAATCTGACAGAGCTGATGGCAACGACCCTATTGAAGCA
AGGCAACCAATCAATCCACATACCAACTACATTCAGTCACGTGATTCTAC
AACAGGATTCTGATCTCATTTCGCTTAATCAACATTCAAACGTATCAACA
TTCGAAAAAGAAATCTTGTACAAATGCGAAGGACCTAAAAGACACGTGGT
CGGTAACCATGTATACCAGAAAGCAGAATTCGGACAAAGATCGACTATCG
GACACGTCAAGGCTCAAGGATTAGTCAATGGATTAAATATTTCATCCCTG
GAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGTATCGTTGGTAAGAA
GACCATGAAANAAACGGTACCCACGCTAAACGTCTACTGGTGCATAACAT
GACAGTCAGTGGTCTGATTGATGGCGTCAATTTGACTCAATTGAATGAAG
AACTGGTGACAACATTAGCAGATGACATCATTATCAAAGGGAAGAAGGTT
TTCCAAAACCACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCGA
CGGNTAACAACCTGTACGTAGAGAAGATCAACAATTATTCATTCCCTGGT
GATTTTGTTCAAATTAGAGATGATGAAAATATCACAATAACTGGCATAAA
GACATTTTCAAACGACACCATAATCACCAATGACTTGATAATGTCACCAA
ACAGCACTATCAATGGATTCGACCTATCAGAGATCGCAAAGGAGATTGTC
ACTATTCATGAAAACGTTTCCATAGAAACTGATGTTGTGTTTAAAAATCC
AGTGAATTTGTCACAGAATCTTGAAGTTGGACTTTTGAATCAAGTGAATA
TCTCGTCGGAAGAGTTGCTGTTGAAATCAACCAATCAAAAAGTGACAGGT
CATAAACACATACTGAAGTTGGAAGTTCAAGGAGATGTCATAACTCCAAA
CCATATCAATGGAGTGGACGTACAGAAGATGTACAACGAATCNATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002302XLOC_002302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004142-exon-sc0000039-1575043694:683691..683730TCONS_00004142-exon-sc0000039-1575043694:683691..683730Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:682780..683007TCONS_00004142-exon-sc0000039-1575043694:682780..683007Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:680175..680354TCONS_00004142-exon-sc0000039-1575043694:680175..680354Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:679676..679983TCONS_00004142-exon-sc0000039-1575043694:679676..679983Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:679039..679252TCONS_00004142-exon-sc0000039-1575043694:679039..679252Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:678507..678742TCONS_00004142-exon-sc0000039-1575043694:678507..678742Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:677850..678257TCONS_00004142-exon-sc0000039-1575043694:677850..678257Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:675959..677008TCONS_00004142-exon-sc0000039-1575043694:675959..677008Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:672144..673090TCONS_00004142-exon-sc0000039-1575043694:672144..673090Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1575043694:670285..671823TCONS_00004142-exon-sc0000039-1575043694:670285..671823Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:683691..683730TCONS_00004142-exon-sc0000039-1510915933:683691..683730Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:682780..683007TCONS_00004142-exon-sc0000039-1510915933:682780..683007Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:680175..680354TCONS_00004142-exon-sc0000039-1510915933:680175..680354Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:679676..679983TCONS_00004142-exon-sc0000039-1510915933:679676..679983Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:679039..679252TCONS_00004142-exon-sc0000039-1510915933:679039..679252Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:678507..678742TCONS_00004142-exon-sc0000039-1510915933:678507..678742Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:677850..678257TCONS_00004142-exon-sc0000039-1510915933:677850..678257Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:675959..677008TCONS_00004142-exon-sc0000039-1510915933:675959..677008Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:672144..673090TCONS_00004142-exon-sc0000039-1510915933:672144..673090Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1510915933:670285..671823TCONS_00004142-exon-sc0000039-1510915933:670285..671823Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:683691..683730TCONS_00004142-exon-sc0000039-1491911889:683691..683730Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:682780..683007TCONS_00004142-exon-sc0000039-1491911889:682780..683007Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:680175..680354TCONS_00004142-exon-sc0000039-1491911889:680175..680354Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:679676..679983TCONS_00004142-exon-sc0000039-1491911889:679676..679983Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:679039..679252TCONS_00004142-exon-sc0000039-1491911889:679039..679252Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:678507..678742TCONS_00004142-exon-sc0000039-1491911889:678507..678742Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:677850..678257TCONS_00004142-exon-sc0000039-1491911889:677850..678257Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:675959..677008TCONS_00004142-exon-sc0000039-1491911889:675959..677008Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:672144..673090TCONS_00004142-exon-sc0000039-1491911889:672144..673090Clytia hemisphaericaexon
TCONS_00004142-exon-sc0000039-1491911889:670285..671823TCONS_00004142-exon-sc0000039-1491911889:670285..671823Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:670285..683730 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.601844	0.648707	0.78356	1.2172e-07	0	0	3.19758e-06	0	0.20197	0	0	0	0	0	7.06718e-08	0	0	4.74662e-08	0	0	7.24202e-09	0.152783	3.11508e-07	1.4414e-05	4.61048e-06	0	0	0	0.628342	0.000121668
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004142 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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