TCONS_00004139 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004139
Unique NameTCONS_00004139
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5110

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004139 ID=TCONS_00004139|Name=TCONS_00004139|organism=Clytia hemisphaerica|type=transcript|length=5110bp
tTGTTCTTTTGGTTGTGGTTTGTGTGGAGCATGCGTATTGCGTTAAAACA
TTCCACGATGAAGAACTGCATTCGAAAATCCCGCTTCGTTTGAAACGTGA
AATCGAAGAACTTGTTCACAAACAACTTCATCAAACCATCTCATTGCATT
ACAAtacaaatgatgacgtcatcagcttgTCACGTGATCCGATTATCAAA
ACGAATTTTCACCATCGAGCAAGAAGAGATTTAGGTGACGGTATTGCTGG
CAATGAAACAGTGTATTCCGAGTGGAGCCACTTCGGATTTTGTTCAGCCA
AGTGTGGTGGCGGAATTCGCGTACGAAGTCGAGAATGTTTGAATGGAACT
TGTTTGAATGAAGATTTGATAGAAAAACAATCATGTGGCAACTTCCCTTG
TGTCTCTGGTTCATACGTCTTGGAAGGGATTTCCGCAGATTGGATACTCC
GAGATTTGACAGATGCCATCACTATCAAATTCTTTGTTCTACTGAATAAA
ATCTTCCTTGGCAAGTTGACCAGCACTGAGATCAAACTTTACAATTACGA
ACTCACCTCGTCGACATTCAAGTTTGCACAGAGCATCCAANTAGTGAAAT
TTGTGAAGATAAAGATACTTGTGTGGTGGAATCGAGAGTTTTGACACTTC
TTGGTACAAGCACTGACCCATGCCCGTATACAAATAAATACCTCAAGATC
GTCTATTCTTGCAGTTCATTATCTTACAGAAGTACACCATACTTTTACGA
ATGGAACCATGTTGGATTAACCATCGTCCCTAGCGACAACTTGATAACAT
ATGGTGCTGAAGATGTAGAATCGTTTCATATCCATGGCAACGCTTTTGTA
GCAGTTGCTAACCACATCAACGATCAACGACAATATCATTTGGATTCTGa
aatttatgtttttgattTGGCTAAACGACAATTTCGAAGTTTCCAAAAAT
TACGAACAGATGGTGCAATTGATTTGGAGTTTTTCGTGATTGGTCGAGGC
ATAACACGTGAATATTTCCTCGCGGTTGCAAACCATGTCAAGGTTGTCCC
TGGGCTCGGCAAAACGCACGAGGTTGACTCTATCATCTACAAATGGAACT
GGAATTTGTTTGTTCCTTTTCAATGTATTAAAACGAACGGTGCCAAGAAA
TGGACTGCTGTTACTGGTCAAAATGGCGAGTTCATATTAACACACACCAA
TATGCATGGAAACGTCACCTTCTACAGTTACGATGGTTGGAGATTTTACT
TGACCAAGAAGCAGCCACAAGATCAGATCTTTCAACATTCTGCAACTACA
ACCTCCATCTCTATCAACACTCCTTCCTTCTCCACTAAGATGTTGGCAAT
ACAACCAAAACCAGAGTTTGTTGATGACGTCAATAACATCTACTCTTTCC
AATTCAAAcaagtttttcctaattttgacTTGTTGGAGACATGTTTACAA
ACTGTCCAACAGATTAATCGAACCGTTTACAATGAACTGTTACCACGTGC
AAAGCAAGTGAACGAATCCTTCACGAAGATTAAAAATGATATTGTACTTC
TGGAGGATGTTATTTATTTGACAGagAACAAGACTTTCACAGACCTCACA
GTGAATGGAAAAACCAACTTGAACAATGCCACAATCAAGAACATCAAACT
CTCCCAATCCGATCTCAATACCGTCACTATGGTGAACAACTTACAAGTCC
AGAAGACAAACCAAAGAAACATCTTGGCAGTTCTTCAAAACAGAATCAAA
TCCTCGGTCACATATTCAACTGAACAAACGATTACTGGATtgaacaaatt
tcaaaatgatgTCTATTTCAAGACATTGACTATAAATGGAAATGTATCCG
TTGGCAATCTAACCAATGGAAAGGACCTCTCTAACGTTTCCAGAGATGCA
ATCTACATTAACAAGGATGAAGTGTTCGAATCCCAAATAACCTTCACTAG
CAATATCACATTTGATTCCATCTCTGTCCAACACATCAACAATATTTCGA
CAACCAAGCTTCGATCAATCAACAAAGCATCCAACATCTCTGGACAACAG
ACTTTCCAAGACTTCCAGACATCATCAGCCACTCAAAACAACATTCAAGT
CAATGGCTTAGTTGATGGTGTGGATACTTCAAAGCTAGTGCTATTGGATA
CAGATCAAAACATTACTGCATTGCATCAATTTACAAACAAGACCACAATG
CAACAGGATTTCCATATCCAGGGCCTGGTCAACAATATGGACATTTCTAC
TATTGCTTCAGACACCTTAAAGAAGAATAAAGAAGACACAGTCACTGCAT
ATCAACGATTCTCCAGCATAGAAATCAAGGGAGATTTGAACATGGCGGAC
AAGAAGACAATTAATGATGTGGATGTCTCCAATCTCACTTCCAGTGGAAT
CTATCTGAACGCCGTCCAGGAATTTGGCAACATCGTATTCCAAAACAACG
TCACTTTCAATGACCAAATATCGCTTGGTGAAACACTCAACAACGTCACA
ATCGATGATTTGGTATTCACAGATCAAACAACTGTCTTTCATCATCCAAT
CACATTCAAGCAAAATATCACATGTTCTGATCACGTGACCGTGGATGGAA
AAATCAACAACCTCAATATTACTGAAGACATCATGGACGTTTCATCCAAC
CAAACCATTACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTCAAA
CAATCTTCAGGTCCATGATCATCTTGATGGAATTGACATCAATGCATTTA
TCAAGAACGTTATGACTTACAATACAACTCAAAACGTAACTGCAACAAAA
TTCTTCAGTAACTTGACCACAGATTCGATATGGTTCAACAACTGTACAGA
CCAACAATGTATCTGGTTAAACATCTTATTGAAACTTAAGGAAGAATCAA
TCCATAAAACCAACGGACAGATATCAGTGAATGGAACAAAATCTTTCTCA
GATGTTTTAATCCGCGGTAATCTCACTCTTAATGGTTTATTAGATGGTTT
AGAATTCCCTGGTGATTTCTTGCAGCGATCCATTGATGAAGTGATCAATG
GTACCTACACTTTCAACAACGTCACATTCGTCAAAAATATCACCGCTGAT
ACGCTAAATGGTTACAATCTAACTGAACTCTACGAACGTGTTTTGAGGAA
GGTTGGCCATGAACAAATCGTCATCGCCAATTGGTCTTTCAATGATCACA
CTCACTTTGATGAACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATCTA
TCACGTGATGCACTTTTAGCCAATCAGGATCATGTAATTTCTGGGGAAAA
GACTTTCCAAAACGGTACCCACGCTAAACGTCTACTGGTGCATAACATGA
CAGTCAGTGGTCTGATTGATGGCGTCAATTTGACTCAATTGAATGAAGAA
CTGGTGACAACATTAGCAGATGACATCATTATCAAAGGGAAGAAGGTTTT
CCAAAACCACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCGACG
GTGTcaacatttcaaaattgaatGATCAAGCTATGAAGCTGGATGAGGAT
CAAATTGTCACTGGAAAGAAGattttccaagagAAGATTGAAGTCTCGAT
GGAGAATCTCAAAGTTGGTGGTTTGATCAATGGAATCAATTTGACCGAAC
TTCTACAACAATCCATCAACAAGAACGAGCCATCAGTTGTGATTCGACAA
AACTCGACTATCCAGAATCTAACAATCCGTGGTGACACATCCACCCATGC
ATTGAATGGATTGAATTTGACCGACATTGTTGGATCAGCCTTGATGAAAG
ATGGTGATCAAACTATCCATGGTGATGTCTACGTAAATGAGCTTGTTATC
AATGGCGATCTCAATATTACCAACCTTAACGGTCGTGACTTCTTGGAAGA
AGTGATTCAGCTTAGCAACCCAGGATCCATTTCATCTCACCAATTCTTCC
AAGACGGTATCACAACACAGCAGTTGGTCACACAACTACTCAATGGTCAA
AATCTAACAGAGTTTTTCAACAGTATTGTCTTCATCGATCAAAACGCAAC
TATTACCGGCAAGAAGATTTTCACTTCAGAACTTCGCGTTGATCATCTGA
TTGCTCATAGTTTAATCAACTCCAAGAATCTGACAGAGCTGATGGCAACG
ACCCTATTGAAGCAAGGCAACCAATCAATCCACATACCAACTACATTCAG
TCACGTGATTCTACAACAGGATTCTGATCTCATTTCGCTTAATCAACATT
CAAACGTATCaacattcgaaaaagaaatcttgTACAAATGCGAAGGACCT
AAAAGACACGTGGTCGGTAACCATGTATACCAGAAAGCAGAATTCGGACA
AAGATCGACTATCGGACACGTCAAGGCTCAAGGATTAGTCAATGGATTAA
ATATTTCATCCCTGGAGAAAGAAGTGGTCACTAAAACTGGAAACCACAGT
ATCGTTGGTAAGAAGACCATGAAANAAACGGTACCCACGCTAAACGTCTA
CTGGTGCATAACATGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGAC
TCAATTGAATGAAGAACTGGTGACAACATTAGCAGATGACATCATTATCA
AAGGGAAGAAGGTTTTCCAAAACCACGTGTCGTTTGGCGGTAATTTAACG
GTGGGATTGATCGACGGNTAACAACCTGTACGTAGAGAAGATCAACAATT
ATTCATTCCCTGGTGATTTTGTTCAAATTAGAGATGATGAAAATATCACA
ATAACTGGCATAAAGACATTTTCAAACGACACCATAATCACCAATGACTT
GATAATGTCACCAAACAGCACTATCAATGGATTCGACCTATCAGAGATCG
CAAAGGAGATTGTCACTATTCATGAAAACGTTTCCATAGAAACTGATGTT
GTGTTTAAAAATCCAGTGAATTTGTCACAGAATCTTGAAGTTGGACTTTT
GAATCAAGTGAATATCTCGTCGGAAGAGTTGCTGTtgaaatcaaccaatc
aaaaagTGACAGGTCATAAACACATACTGAAGTTGGAAGTTCAAGGAGAT
GTCATAACTCCAAACCATATCAATGGAGTGGACGTACAGAAGATGTACAA
CGAATCNATC
Run BLAST on NCBI

transcript from alignment at sc0000039:670285..683007-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004139 ID=TCONS_00004139|Name=TCONS_00004139|organism=Clytia hemisphaerica|type=transcript|length=12723bp|location=Sequence derived from alignment at sc0000039:670285..683007- (Clytia hemisphaerica)
TTGTTCTTTTGGTTGTGGTTTGTGTGGAGCATGCGTATTGCGTTAAAACA
TTCCACGATGAAGAACTGCATTCGAAAATCCCGCTTCGTTTGAAACGTGA
AATCGAAGAACTTGTTCACAAACAACTTCATCAAACCATCTCATTGCATT
ACAATACAAATGATGACGTCATCAGCTTGTCACGTGATCCGATTATCAAA
ACGAATTTTCACCATCGAGCAAGAAGAGGTATTGGCCCGATTTCTTTCTG
AAACAGTTTCTATTCAAATGTGTTCGAAAAACCAAACTATAGTGGGAACT
CGTTTTAGTTTTAAACGAGAATCAAAATTTCAATATAAGGAAGTAGAGAT
GGGAATAATTCTGGTCCAGCCAATGGAAAACAATGTCTCACCAAAGACCT
TTTTCTACTGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTAAGACTAATTGTATGACATTTTATTTTAACTCAGATTTAGGT
GACGGTATTGCTGGCAATGAAACAGTGTATTCCGAGTGGAGCCACTTCGG
ATTTTGTTCAGCCAAGTGTGGTGGCGGAATTCGCGTACGAAGTCGAGAAT
GTTTGAATGGAACTTGTTTGAATGAAGATTTGATAGAAAAACAATCATGT
GGCAACTTCCCTTGTGTCTCTGGTAAGCGCTATATTTATTTTGTAATGTT
TGTTTATATTTTCATAACCTGAAAAATAAGAAAAAGGAAGAGATTGCATT
TGCCTCGTTTCTGGATATAGCAGTAATTTTATGTAATTTTTGCAATTTTC
AATGAACACTTTATGATAAGCACAGCTTGAATTTAACTTTTCTTCGAAAT
TTCTCTTTGACAGGTTCATACGTCTTGGAAGGGATTTCCGCAGATTGGAT
ACTCCGAGATTTGACAGATGCCATCACTATCAAATTCTTTGTTCTACTGA
ATAAAATCTTCCTTGGCAAGTTGACCAGCACTGAGATCAAACTTTACAAT
TACGAACTCACCTCGTCGACATTCAAGTTTGCACAGAGCATCCAAGTTCA
AGATGGCATCTCTTTCACAATCATGGAAACTGAACAATCAATCTACCTGG
TGGTCCTGGAGAAGTTTTCCGGTCATTATTTCGGTGTTTCCTCGAGAATG
TACATGTATGATCCATCAAGACTCTCCGGAGGTGTCTTCCACACATATCA
ACCTATCTACTTCAAAGTTTACGATCCTTCAGCTGTTACCAGCCTCGAAA
TTTATGGCAAACCGTATTTAGCTGTTGTCAACAGGAAAAATAAAGGTGAA
TTAAATTGATACTTTTCCTTATGAGCATTTATTTTGGCGTCCGGCGGTTG
GTCAAAATACGATTAAGGGCGAATATTTAATTTGGCGAATGGCAGAATTT
GTATAATTTAGCGGGGATTTGATTTGGCTAATGAGAAAATTTAGACGCTT
GCAAATCAAAAAATGATAGTTCTTACTTAAGAAGGCTGATTTTTTTTCAT
GTACAAAATTTGGCGGGTATATAATACAGATGAGATGAAGCTTTTATAAG
ATACTTTACTAATTAGTCATTTGAATCGAAGTACTAAAAATGTCGCGTTC
TTTAGAAAAAGTAACAATTGTTTTATTACTGGTTAACGACCGACCAAATC
AAATAAGAGCTTATAAAAACTCCATTTCGTCCCATATAATATGGCGGATT
TTACTAAAACCCACTAAATCAAGATTTAAGCCCTGCCAAAAGTTCACTTA
AGTATATCATGATACTTCAAAATAAAATCACTCTTGTAATTTTGGACATA
TCTCGTATAATAGAATTTCATCTTATATGACCAAATAGGCCTGCTTCATT
TTGGTTATTCGTGAAACTTCCATGTGAAATACTATCATTAAATTTATAAA
TCTGTAACAATTTTTTNTTGAATTGAATTGACCAAAGACCTTTGTGCATT
TTTTACGAAAGTTGATTGTAAGACTAATTGTATGACATTTTATTTTAACT
CAGATTTAGGTGACGGTATTGCTGGCAATGAAACAGTGTATTCCGAGTGG
AGCCACTTCGGATTTTGTTCAGCCAAGTGTGGTGGCGGAATTCGCGTACG
AAGTCGAGAATGTTTGAATGGAACTTGTTTGAATGAAGATTTGATAGAAA
AACAATCATGTGGCAACTTCCCTTGTGTCTCTGGTAAGCGCTATATTTAT
TTTGTAATGTTTGTTTATATTTTCATAACCTGAAAAATAAGAAAAAGGAA
GAGATTGCATTTGCCTCGTTTCTGGATATAGCAGTAATTTTATGTAATTT
TTGCAATTTTCAATGAACACTTTATGATAAGCACAGCTTGAATTTAACTT
TTCTTCGAAATTTCTCTTTGACAGGTTCATACGTCTTGGAAGGGATTTCC
GCAGATTGGATACTCCGAGATTTGACAGATGCCATCACTATCAAATTCTT
TGTTCTACTGAATAAAATCTTCCTTGGCAAGTTGACCAGCACTGAGATCA
AACTTTACAATTACGAACTCACCTCGTCGACATTCAAGTTTGCACAGAGC
ATCCAANTAGTGAAATTTGTGAAGATAAAGATACTTGTGTGGTGGAATCG
AGAGTTTTGACACTTCTTGGTACAAGCACTGACCCATGCCCGTATACAAA
TAAATACCTCAAGATCGTCTATTCTTGCAGTTGTAAGTAAATGTTATCTA
AACTTCCATTTTAAAGTACTAAAGAAATTTGTAAACATACCGTATGCAGC
GGGATACAAAATCAAAACCAATGTCACATTGGTTTTTTTTTTGTTTCAAT
TGTTTTACAAGTTTGTTTTGGACACGTGATTTTAATTGTTCTCTTTAATG
ACACGTGATTCGCGCAATGTTTACATTTTACTACATTCTTATCCCTTTAG
TCTGAGGCAGATTTTGGATCGAAATTATGCCTGTGGAAAGAAATCAACGA
TCCGAGCCTATGTGATCAGAAATTAATAATAGGATGCTAAAACTCTTATA
AGCGAAGAAAACTTCTGCCAGGACAAGTTATTCCATAAAACCTCTACATT
TCCAATCGGTTGAACGATCATGGGAAAATCTATTTCATTCAATCTTTTTT
TCTAGCATTATCTTACAGAAGTACACCATACTTTTACGAATGGAACCATG
TTGGATTAACCATCGTCCCTAGCGACAACTTGATAACATATGGTGCTGAA
GATGTAGAATCGTTTCATATCCATGGCAACGCTTTTGTAGCAGTTGCTAA
CCACATCAACGATCAACGACAATATCATTTGGATTCTGAAATTTATGTTT
TTGATTTGGCTAAACGACAGTAAGGATTTTCATCGTTTTTAGCACTGGCT
TGGAAAATAACTCAACATTGACAAAAATGAAAATTGCATGAATAAGGCGA
TAAGAAAATTCAAAACATTGTNGGCACTGGCTTGGAAAATAGCTCAAATT
GACAGATATGAAAATTTCATGAATAAGGCGATAAGAAAATTCAAAACATT
GTTCCATAAATTTGAATTTCGTCTAGTTTTCTTATTTATACTATACCTAA
GGGAGGTAACTGTGGCTATTAATTATTCTTATTATTAACTCTCGTCAATT
TATTTCCCATCTTAGATTTCGAAGTTTCCAAAAATTACGAACAGATGGTG
CAATTGATTTGGAGTTTTTCGTGATTGGTCGAGGCATAACACGTGAATAT
TTCCTCGCGGTTGCAAACCATGTCAAGGTTGTCCCTGGGCTCGGCAAAAC
GCACGAGGTTGACTCTATCATCTACAAATGGAACTGGAATTTGTTTGTTC
CTTTTCAATGTATTAAAACGAACGGTGCCAAGAAATGGACTGCTGTTACT
GGTACGTTGCTTACAATCTCAAATTTCAGTTCAAAAACAGCTCGTTCTTA
GTTGCCTATAACTTATTTTGGAATCTTTCGTGGTCGACTTTAGGCTAAAT
CTTCTGAAAGGTATCTTCATCTTTCAATTTCTTCTCATAACTTTATGATT
TTCTCCGACGATTGCCTTTTCAATTCAAACCAATTTCAATCTGATTTAAA
CCATATCGATTGAGAGTTAAACTTGTGTTTATTTTTCTATATTTTGTTAG
GTCAAAATGGCGAGTTCATATTAACACACACCAATATGCATGGAAACGTC
ACCTTCTACAGTTACGATGGTTGGAGATTTTACTTGACCAAGAAGCAGCC
ACAAGATCAGATCTTTCAACATTCTGCAACTACAACCTCCATCTCTATCA
ACACTCCTTCCTTCTCCACTAAGATGTTGGCAATACAACCAAAACCAGAG
TTTGTTGATGACGTCAATAACATCTACTCTTTCCAATTCAAACAAGTTTT
TCCTAATTTTGACTTGTTGGAGACATGTTTACAAACTGTCCAACAGATTA
ATCGAACCGTTTACAATGAACTGTTACCACGTGCAAAGCAAGTGAACGAA
TCCTTCACGAAGATTAAAAATGATATTGTACTTCTGGAGGATGTTATTTA
TTTGACAGGTAAATCTTAAGTCTAACCTCTTTACACGTATAACAGATTTA
ATAGTGAGATGAAAAATTTTAAGACAAGCTCTACATAATATATACGAGGG
TTTCACTACCTTACACGAAGAGTTTTCAAACATGGCAACTTAGATAAAAA
GCAAAGCTCTATTGGAGAAAGGCTTAAATGGCTAAAAATCACCGAAATCG
TAAAAAAAAGGCTGTAACTTTTCTGTTTCATTTTTTCAGAGAACAAGACT
TTCACAGACCTCACAGTGAATGGAAAAACCAACTTGAACAATGCCACAAT
CAAGAACATCAAACTCTCCCAATCCGATCTCAATACCGTCACTATGGTGA
ACAACTTACAAGTCCAGAAGACAAACCAAAGAAACATCTTGGCAGTTCTT
CAAAACAGAATCAAATCCTCGGTCACATATTCAACTGAACAAACGATTAC
TGGATTGAACAAATTTCAAAATGATGTCTATTTCAAGACATTGACTATAA
ATGGAAATGTATCCGTTGGCAATCTAACCAATGGAAAGGACCTCTCTAAC
GTTTCCAGAGATGCAATCTACATTAACAAGGATGAAGTGTTCGAATCCCA
AATAACCTTCACTAGCAATATCACATTTGATTCCATCTCTGTCCAACACA
TCAACAATATTTCGACAACCAAGCTTCGATCAATCAACAAAGCATCCAAC
ATCTCTGGACAACAGACTTTCCAAGACTTCCAGACATCATCAGCCACTCA
AAACAACATTCAAGTCAATGGCTTAGTTGATGGTGTGGATACTTCAAAGC
TAGTGCTATTGGATACNAAGGCTGTAACTTTTCTGTTTCATTTTTTCAGA
GAACAAGACTTTCACAGACCTCACAGTGAATGGAAAAACCAACTTGAACA
ATGCCACAATCAAGAACATCAAACTCTCCCAATCCGATCTCAATACCGTC
ACTATGGTGAACAACTTACAAGTCCAGAAGACAAACCAAAGAAACATCTT
GGCAGTTCTTCAAAACAGAATCAAATCCTCGGTCACATATTCAACTGAAC
AAACGATTACTGGATTGAACAAATTTCAAAATGATGTCTATTTCAAGACA
TTGACTATAAATGGAAATGTATCCGTTGGCAATCTAACCAATGGAAAGGA
CCTCTCTAACGTTTCCAGAGATGCAATCTACATTAACAAGGATGAAGTGT
TCGAATCCCAAATAACCTTCACTAGCAATATCACATTTGATTCCATCTCT
GTCCAACACATCAACAATATTTCGACAACCAAGCTTCGATCAATCAACAA
AGCATCCAACATCTCTGGACAACAGACTTTCCAAGACTTCCAGACATCAT
CAGCCACTCAAAACAACATTCAAGTCAATGGCTTAGTTGATGGTGTGGAT
ACTTCAAAGCTAGTGCTATTGGATACAGATCAAAACATTACTGCATTGCA
TCAATTTACAAACAAGACCACAATGCAACAGGATTTCCATATCCAGGGCC
TGGTCAACAATATGGACATTTCTACTATTGCTTCAGACACCTTAAAGAAG
AATAAAGAAGACACAGTCACTGCATATCAACGATTCTCCAGCATAGAAAT
CAAGGGAGATTTGAACATGGCGGACAAGAAGACAATTAATGATGTGGATG
TCTCCAATCTCACTTCCAGTGGAATCTATCTGAACGCCGTCCAGGAATTT
GGCAACATCGTATTCCAAAACAACGTCACTTTCAATGACCAAATATCGCT
TGGTGAAACACTCAACAACGTCACAATCGATGATTTGGTATTCACAGATC
AAACAACTGTCTTTCATCATCCAATCACATTCAAGCAAAATATCACATGT
TCTGATCACGTGACCGTGGATGGAAAAATCAACAACCTCAATATTACTGG
TTAGTCTTAATTTAATAAGATACTTTAGATTTTCGTGTGATTATCTGTAA
TTATCTTAACCCGTAGCGTAGATGCTTTAAAGTGCAGCACATTTTGTAAA
ATCACTCATTTAAACTTTACTCTGCAAAAGTTTCATTTTCATTCAAAGAA
CAAACTTAATCCATCACCATTGGAAAATTTAAATATGTTTTTTAGAAACG
GGTTGTTTATAACATTCTTTTAATAGGAATATCTTTGAAATTAATATAGT
CGGGCTTAAAAGTAGACCAGTAACTGAAATCAATTACATTCTTATTATTC
TAGAAGACATCATGGACGTTTCATCCAACCAAACCATTACTGGCAACACC
ATTTTCACCAAGAATCTCCAAATGTCAAACAATCTTCAGGTCCATGATCA
TCTTGATGGAATTGACATCAATGCATTTATCAAGAACGTTATGACTTACA
ATACAACTCAAAACGTAACTGCAACAAAATTNATCAGTTGTGATTCGACA
AAACTCGACTATCCAGAATCTAACAATCCTTGGTGACACATCCACCCATG
CATTGAATGGATTGAATTTGACCGACATTGTTGGATCAGCCTTGATGAAA
GATGGTGATCAAACTATCCATGGTGATGTCTACGTAAATGAGCTTGTTAT
CAATGGTGATCTCAATATTACCAACCTTAACGGTCGTGACTTCTTGGAAG
AAGTGATTCAGCTTAGCAACCCAGGATCCATTTCATCTCACCAATTCTTC
CAAGACGGTATCACAACACAGCAGTTGGTCACACAACTACTCAATGGTCA
AAATCTAACAGAGTTTTTCAACAGNCCTGGTTAAACATCTTATTGAAACT
TAAGGAAGAATCAATCCATAAAACCAACGGACAGATATCTGTTAATGGAA
CTAAATCCTTCTCAGATGTTTTAATCCGTGGTAATCTCACTCTTAATGGT
TTATTAGATGGTTTAGAATTCCCTGGTGATTTCTTGCAGCGATCCATTGA
TGAAGTGATCAATGGTACCTACACTTTCAACAACGTCACATTCGTCAAAA
ATATCACCGCTGATACGCTAAATGGTTACAATCTAACTGAACTCTACGAA
CGTGTTTTGAGGAAGGTTGGCCATGAACAAATCGTCATCGCCAATTGGTC
TTTCAATGATCACACTCACTTTGATGAACTTCAAGTTGATGGGTTGGTTG
ACGGAGTAAATCTATCACGTGATGCACTTTTAGCCAATCAGGATCATGTA
ATTTCTGGGGAAAAGACTTTCCATAACGGTACCCACGCTAAACGTCTACT
GGTGCATAACATGACAGTCAGTGGTCTGATTGATGGCGTCAATTTGACTC
AATTGAATGAAGAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNATTAATATAGTCGGGCTTAAAAGTAGACCAGTAACTGAAATCAATTA
CATTCTTATTTTTCTAGAAGACATCATGGACGTTTCATCCAACCAAACCA
TTACTGGCAACACCATTTTCACCAAGAATCTCCAAATGTCGAACAATCTT
CAGGTCCATGATCATCTTGATGGAATTGACATCAATGCATTTATCAAGAA
CGTTATGACTTACAATACAACTCAAAACGTAACTGCAACAAAATTCTTCA
GTAACTTGACCACAGATTCGATATGGTTCAACAACTGTACAGACCAACAA
TGTATCTGGTTAAACATCTTATTGAAACTTAAGGAAGAATCAATCCATAA
AACCAACGGACAGATATCAGTGAATGGAACAAAATCTTTCTCAGATGTTT
TAATCCGCGGTAATCTCACTCTTAATGGTTTATTAGATGGTTTAGAATTC
CCTGGTGATTTCTTGCAGCGATCCATTGATGAAGTGATCAATGGTACCTA
CACTTTCAACAACGTCACATTCGTCAAAAATATCACCGCTGATACGCTAA
ATGGTTACAATCTAACTGAACTCTACGAACGTGTTTTGAGGAAGGTTGGC
CATGAACAAATCGTCATCGCCAATTGGTCTTTCAATGATCACACTCACTT
TGATGAACTTCAAGTTGATGGGTTGGTTGACGGAGTAAATCTATCACGTG
ATGCACTTTTAGCCAATCAGGATCATGTAATTTCTGGGGAAAAGACTTTC
CAAAACGGTACCCACGCTAAACGTCTACTGGTGCATAACATGACAGTCAG
TGGTCTGATTGATGGCGTCAATTTGACTCAATTGAATGAAGAACTGGTGA
CAACATTAGCAGATGACATCATTATCAAAGGGAAGAAGGTTTTCCAAAAC
CACGTGTCGTTTGGCGGTAATTTAACGGTGGGATTGATCGACGGTGTCAA
CATTTCAAAATTGAATGATCAAGCTATGAAGCTGGATGAGGATCAAATTG
TCACTGGAAAGAAGGTATGCACATTTAGAATTATCAAATAAATTTTTGAA
AGAGCCTGAAGAATTTCATGAGCGTTCTTTCTTAATTTTCTTACAGCCAT
TCTTCGTAATCTTTATAAATGCTAATAGTGGTGTAGCTCGAAATGGTGCT
TAAAATACATTTAGTTCATTCAGTGATTTCCTCACACTTTTCTTTTGATC
ACTTAAAGTAAAATCTCTGGCCCAACCTTCATACTCTGTTGAAAATTCCT
TCTAACAATTGAACAAAAGATTCAATCAAAATTTGTTACATATATCGTGG
GTCTACTCTTAGAAAAGTTTTCACCCTTTTTCAGATTTTCCAAGAGAAGA
TTGAAGTCTCGATGGAGAATCTCAAAGTTGGTGGTTTGATCAATGGAATC
AATTTGACCGAACTTCTACAACAATCCATCAACAAGAACGAGCCATCAGT
TGTGATTCGACAAAACTCGACTATCCAGAATCTAACAATCCGTGGTGACA
CATCCACCCATGCATTGAATGGATTGAATTTGACCGACATTGTTGGATCA
GCCTTGATGAAAGATGGTGATCAAACTATCCATGGTGATGTCTACGTAAA
TGAGCTTGTTATCAATGGCGATCTCAATATTACCAACCTTAACGGTCGTG
ACTTCTTGGAAGAAGTGATTCAGCTTAGCAACCCAGGATCCATTTCATCT
CACCAATTCTTCCAAGACGGTATCACAACACAGCAGTTGGTCACACAACT
ACTCAATGGTCAAAATCTAACAGAGTTTTTCAACAGTATTGTCTTCATCG
ATCAAAACGCAACTATTACCGGCAAGAAGATTTTCACTTCAGAACTTCGC
GTTGATCATCTGATTGCTCATAGTTTAATCAACTCCAAGAATCTGACAGA
GCTGATGGCAACGACCCTATTGAAGCAAGGCAACCAATCAATCCACATAC
CAACTACATTCAGTCACGTGATTCTACAACAGGATTCTGATCTCATTTCG
CTTAATCAACATTCAAACGTATCAACATTCGAAAAAGAAATCTTGTACAA
ATGCGAAGGACCTAAAAGACACGTGGTCGGTAACCATGTATACCAGAAAG
CAGAATTCGGACAAAGATCGACTATCGGACACGTCAAGGCTCAAGGATTA
GTCAATGGATTAAATATTTCATCCCTGGAGAAAGAAGTGGTCACTAAAAC
TGGAAACCACAGTATCGTTGGTAAGAAGACCATGAAANAAACGGTACCCA
CGCTAAACGTCTACTGGTGCATAACATGACAGTCAGTGGTCTGATTGATG
GCGTCAATTTGACTCAATTGAATGAAGAACTGGTGACAACATTAGCAGAT
GACATCATTATCAAAGGGAAGAAGGTTTTCCAAAACCACGTGTCGTTTGG
CGGTAATTTAACGGTGGGATTGATCGACGGNTAACAACCTGTACGTAGAG
AAGATCAACAATTATTCATTCCCTGGTGATTTTGTTCAAATTAGAGATGA
TGAAAATATCACAATAACTGGCATAAAGACATTTTCAAACGACACCATAA
TCACCAATGACTTGATAATGTCACCAAACAGCACTATCAATGGATTCGAC
CTATCAGAGATCGCAAAGGAGATTGTCACTATTCATGAAAACGTTTCCAT
AGAAACTGATGTTGTGTTTAAAAATCCAGTGAATTTGTCACAGAATCTTG
AAGTTGGACTTTTGAATCAAGTGAATATCTCGTCGGAAGAGTTGCTGTTG
AAATCAACCAATCAAAAAGTGACAGGTCATAAACACATACTGAAGTTGGA
AGTTCAAGGAGATGTCATAACTCCAAACCATATCAATGGAGTGGACGTAC
AGAAGATGTACAACGAATCNATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002302XLOC_002302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004139-exon-sc0000039-1575043694:682780..683007TCONS_00004139-exon-sc0000039-1575043694:682780..683007Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:680175..680354TCONS_00004139-exon-sc0000039-1575043694:680175..680354Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:679676..679983TCONS_00004139-exon-sc0000039-1575043694:679676..679983Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:679039..679252TCONS_00004139-exon-sc0000039-1575043694:679039..679252Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:678507..678742TCONS_00004139-exon-sc0000039-1575043694:678507..678742Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:677850..678257TCONS_00004139-exon-sc0000039-1575043694:677850..678257Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:675959..677008TCONS_00004139-exon-sc0000039-1575043694:675959..677008Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:675569..675654TCONS_00004139-exon-sc0000039-1575043694:675569..675654Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:672144..673004TCONS_00004139-exon-sc0000039-1575043694:672144..673004Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1575043694:670285..671823TCONS_00004139-exon-sc0000039-1575043694:670285..671823Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:682780..683007TCONS_00004139-exon-sc0000039-1510915933:682780..683007Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:680175..680354TCONS_00004139-exon-sc0000039-1510915933:680175..680354Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:679676..679983TCONS_00004139-exon-sc0000039-1510915933:679676..679983Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:679039..679252TCONS_00004139-exon-sc0000039-1510915933:679039..679252Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:678507..678742TCONS_00004139-exon-sc0000039-1510915933:678507..678742Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:677850..678257TCONS_00004139-exon-sc0000039-1510915933:677850..678257Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:675959..677008TCONS_00004139-exon-sc0000039-1510915933:675959..677008Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:675569..675654TCONS_00004139-exon-sc0000039-1510915933:675569..675654Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:672144..673004TCONS_00004139-exon-sc0000039-1510915933:672144..673004Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1510915933:670285..671823TCONS_00004139-exon-sc0000039-1510915933:670285..671823Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:682780..683007TCONS_00004139-exon-sc0000039-1491911889:682780..683007Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:680175..680354TCONS_00004139-exon-sc0000039-1491911889:680175..680354Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:679676..679983TCONS_00004139-exon-sc0000039-1491911889:679676..679983Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:679039..679252TCONS_00004139-exon-sc0000039-1491911889:679039..679252Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:678507..678742TCONS_00004139-exon-sc0000039-1491911889:678507..678742Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:677850..678257TCONS_00004139-exon-sc0000039-1491911889:677850..678257Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:675959..677008TCONS_00004139-exon-sc0000039-1491911889:675959..677008Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:675569..675654TCONS_00004139-exon-sc0000039-1491911889:675569..675654Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:672144..673004TCONS_00004139-exon-sc0000039-1491911889:672144..673004Clytia hemisphaericaexon
TCONS_00004139-exon-sc0000039-1491911889:670285..671823TCONS_00004139-exon-sc0000039-1491911889:670285..671823Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:670285..683007 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
508.434	499.874	286.96	225.974	0.0982091	0.155982	0.0487585	0.223183	0.000236868	0.217819	0	6.60255e-10	1.46888e-09	0.121386	0.00776788	1.23207e-07	0	0.00422335	2.63329e-08	0	0.117693	6.06103e-07	87.4264	95.7151	0.187985	0.30968	2.32231	3.04076	96.9175	103.978
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004139 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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