TCONS_00004106 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004106
Unique NameTCONS_00004106
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4051

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004106 ID=TCONS_00004106|Name=TCONS_00004106|organism=Clytia hemisphaerica|type=transcript|length=4051bp
GCATCTTTTTGAGAAGTTTTCTGCAATGCTCTGTTTGATTTAAATGAAAC
TGAGAATTTCAACGCGATTTTATAATTTGTTAGAAAGACGACAAATGATA
TCAAAATAGTTGGTTGAAGTCTACGAATTTCAGTATTGCCTAACaggaaa
ttatgaaatattgaCGAGAGAGGAGTCAAGATGGTAGCTTTATTGTTGCA
TTTACAAATTATATTGATAATGTTAATCCAGGCTAGTGCTTCCAGACCTG
AATGTCCTTGTTATTGCGATGACAGTGACCGAATGAACTGCGCAAACCAG
AAATGGGACACTATACCAACAAACATCCCTGATTTTGTGACTGTTATAAA
TTTCCAAATCAACGAAGCACAACATATCAAAGAACGTACTTTCGATGGTT
TGAATGAAATGGTTCTACTCAGAATGGACAGCAACAAGATACACACCATT
GAACCGAAAGCGTTTTTCGGAATGCCGAAGCTTGATGAACTTGTTTTAAA
CAATAACCAGATAGGTGAATTCGATGAGAGGATGGTCGACCCGAGATCTC
CTTTAAAAAGAGGCATCAAACTTGATACAAACCAGTTGACAAAATTTCCT
TTGAACCTTTTAAAAAGACACCGAATGTCTATCAGTGTCATTAACAATAA
AATACAATGTGATTGTTTTACAGTGATACCATCAGATCTGAAGGAGTTTG
TTTACGGTGAATGTCACGCCACCAGTGGTAGAAAAACGATCACTTCAATG
ACCTACACAAGTGCTAATTGCCAGAAATGCGAGCACCATAAGTGTGTCCA
TGGCTCGTGCTACCTTGATACGAATGGGAATGCTTTATGTCAATGTTTTG
ACGGATATTTTGGTGAATTGTGTGAAATTGACGAGCAACCAGAGCTGAGA
CCTATATCAGCAGATGACGTCATACCTACACCGTCATTAATGGGGTCGTC
GATATTACTGACAACCACATTCAAGTTCAATATAAAACCATCGTCGTCTA
GTGCAATTGAACAACATTCAACCAAAGTAATTTCTGAGTCAACCATCATA
ACATCAACAAGAGCTACGAAGCAACTCCAACCCCCTTCAAATAGTTTGAA
AATAGAAACGAGCAGCTCATCAAAACAAGCACACCTTTTGGATACCAAGG
ATCCTTATGTTTTGGTGAACCATAATCAACTCCAAACACCCAACATCAAA
ACAGGTGAACGTCTCGTTATCAATGGCTGTCGGTTCCGTAAAAATGGGCC
ACCGATAACACGTGGCAATTACGATCCTGTCTACATCCAAGATGGTTGGA
ACATTATAGGAACAACAATGACAATGATGGATGCGTCAAACCTGTAccag
atgacgtcattggaGTTCGCCAAATCTGCTCCAGAGCATGTTGGCTGGTA
CAGATGCGGCATCAGACACAAAAACGGTTCCATGATCAATATCGATAGTC
GGCCAGTTTATGTTTCACTTCAAGATGTATCTGTAAGCAGATTCAGAGTG
AAGGCAAGTGAAAAAGCCGAGCAAGCTGAAGCCGATCAGATCAAATTGAg
gtTTGAAATGTTGATCGAAGATTTAGATTTGAAAAAGCCAGTGACAGTAC
AAAATGCCAAAATCATGACACATATCAACGGCCAAACATTTTGGCGATCC
AAAATCCTGGTCAGTGATGTGTCTTCGCCTGAGGAGAAACGAAAGGTTTG
TGGCGTCATGCATGACCTTTCCGAACAAGGAGAATTGAAAGCAGGAGTAG
AGATCTTGACACCAATGGATTGTTGTGTTGACAAGGAAAAGAATACACCA
GTTGCAATTGATGACACAATCAAACGACAATGCAGAGCAGGTTCAAGGAG
AACGAGTGAAAAGAAATGTCATTTACATCCAGGAGAGGGCCCATCGTGGT
TGTATTTATCAAGATGTCCACCTAACCCAACCAAAGATGCACTCAAAGGA
CTGAAAAGGGCTCCCACATGCGAAAAGGGCGAAGAACGAAAAGAAAATCG
TTGTATTGCTGTTGAAGAGAAAGCCAGCAAACTGAAAGATTTGGTGTCGA
AAGGACATGCCATTAAAGACGAAGAAGACGTGACGTTGACTGCAGATATC
GTGGAAGAGATCGCCAAAAATGTCGCCTTCAAAGGGAAAGGTGGACAGAA
GAGAGAAGTCACCGTCAAAGAAAAGGTTGCATCAGATACTCTGTTCGCAG
TTAACGACATCATGAAAGCCAATGAGAAAATCTTGGCTAAAGCTCAACTC
TCAATGAACACTTCAACCAAGATTGTCAAATCGTTGGAGAAGATCTCAAT
TTCAATCGCCAAAAGCTTGAACAAATCACATCCTTCGTTTACCTTTACTG
ATAGCAATCTGGCCATGACTATATCCTTGGTCAACCACAACCATTCTAGC
ACATCAGTGGTCACTTATAAAGAACCCATTCAACGTGAGACCACTCTAGG
TATTTATGGCAAGGAAATTGATCTTGTAACTGATAAATCAATGAACGGAA
TGGTGGTCTTACCGGAAACTGCTGTCACCAGTAACAAATCCATTGCTCTT
CGCAGCGTAACTTATCGAAAAGGTGTCTTTTTCCTGAACCAACATCAGCT
TGATAACATCACATCGGGCGGACAAGTGATCGAGCACGCGGTCGGAAGCA
ATGTGTTATCCGTATCTGTAGGAGAGGAAGAGAGAAGGACAGAATTAGAA
GAACCAGTCACTATCTCCTTTCGAAATGATTCTCAAAGTCTTGGTACTGG
TGTCATCATGTTTTGGGATTTCGAGAAAGgcGATTGGTCTGGCGAAGGCT
GTTGGCCGATCAACGAAACCAAGCCAGATATCATTTCATGGAATTGTTCT
CATTTAACCAACTTTGCCTTACTTATCAACGTCAATCAAGATTTCAACAA
TCCATTCGCATTACAATTATTGACATACATTGGAGGAGGGATTTCGATCG
GTGCTTTGTTGATCACCTTGTTCATCTACCTCTCCATCAGaaaattacgt
CGTCGTTTGGCACCTAGACTGTTGATTTGCCTTTCTTTATCTCTCCTCCT
TCTACTGGCCGCTTTCATCGGTCTTGTGGATAAAACCCAATGGAAGCTTG
GATGCAAAATCATCGCTGGAGCCATTCAATATTTGACGTTGGCTACCTTT
TTCTGGATGTTTTGCGAAGGGATTAATTTGTATCGAAATTTCGTTATCCT
GTTCAAGAAATCACCTCATGAAAATATCGTTTTCGTCAAAATGTCCGTCT
TCGCGTGGGGAACACCAGCAGTGTTTGTCTTTTTGACTGTCTTTCTGCGC
TTGGAAGAAGTTGGTTCGAAAGAAATATGCTTGGTCCATGGAAGTGCATT
CTATTTCGGAACCTTACTCCCTGTTGGGCTCATACTGATTTTCAATTGGA
TCGTACTTGTGTTAGCCATTCGTGGAATGAAAACAGACAAAATTCTCCAT
AACAACAAACGACAAACACCAACATGGCTTGAAATATGGCGCGCTTTCAT
TTGCTCCATCATCTTGGGTTTAGCCTGGACATTTGGTATTTTTGCAATTG
GAGATTTGAGAGATATATTTCAATGGTTGTTTTGTGTGTTCAATGCTTTT
CAAGGACTTTTTATTTTCCTACTCTTCGTGGTAAAGAACCAGGAGGTTCA
GAAAtacattttgaaagttttcaacCATAGCACGGTAAGCTCAACAGGGA
ATTCTTTGGATAACGCAACGATTAAAAATGGCTGTTGTCCAGCAAGCCCT
GATTGCAAAACCAACACAACCCAATACAAACATTTATCTTCATGTAGCTT
TGGAAATACAAATGTTTAAAAGAGACTATGATGTTGAAAGGCACGAATAC
GGACAAAAATTGATCCGGGATGAATCACATTGCCCGAGGAGATCAATAAT
TTCCTTTTTGGTATTGATGACGGTTACGATTGGAACAGTATGGTGGTTCT
TGAGACAACTAAGAATATTCATGTAAATAGTTTGAAAATGTACTTATAGC
AATATTGTAGAAtattataaaaaacgaaaaatcaaaCGATCTTAAATTTT
A
Run BLAST on NCBI

transcript from alignment at sc0000039:248730..262067-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004106 ID=TCONS_00004106|Name=TCONS_00004106|organism=Clytia hemisphaerica|type=transcript|length=13338bp|location=Sequence derived from alignment at sc0000039:248730..262067- (Clytia hemisphaerica)
GCATCTTTTTGAGAAGTTTTCTGCAATGCTCTGTTTGATTTAAATGAAAC TGAGAATTTCAACGCGATTTTATAATTTGTTAGAAAGACGACAAATGATA TCAAAATAGTTGGTTGAAGTCTACGAATTTCAGTATTGCCTAACAGGAAA TTATGAAATATTGACGAGAGAGGAGTCAAGATGGTAGCTTTATTGTTGCA TTTACAAATTATATTGATAATGTTAATCCAGGCTAGTGCTTCCAGACCTG AATGTCCTTGTTATTGCGATGACAGTGACCGAATGAACTGCGCAAACCAG AAATGGGACACTATACCAACAAACATCCCTGATTTTGTGACTGTTATAAA TTTCCAAATCAACGAAGCACAACATATCAAAGAACGTACTTTCGATGGTT TGAATGAAATGGTTCTACTCAGAATGGACAGCAACAAGATACACACCATT GAACCGAAAGCGTTTTTCGGAATGCCGAAGCTTGATGAACTTGTTTTAAA CAATAACCAGATAGGTGAATTCGATGAGAGGATGGTCGACCCGAGATCTC CTTTAAAAAGAGGCATCAAACTTGATACAAACCAGTTGACAAAATTTCCT TTGAACCTTTTAAAAAGACACCGAATGTCTATCAGTGTCATTAACAATAA AATACAATGTGATTGTTTTACAGTGATACCATCAGATCTGAAGGAGTTTG TTTACGGTGAATGTCACGCCACCAGTGGTAGAAAAACGATCACTTCAATG ACCTACACAAGTGCTAATTGCCAGAAATGCGAGCACCATAAGTGTGTCCA TGGCTCGTGCTACCTTGATACGAATGGGAATGCTTTATGTCAATGTTTTG ACGGATATTTTGGTGAATTGTGTGAAATTGACGAGCAACCAGAGCTGAGA CCTATATCAGCAGATGACGTCATACCTACACCGTCATTAATGGGGTCGTC GATATTACTGACAACCACATTCAAGTTCAATATAAAACCATCGTCGTCTA GTGCAATTGAACAACATTCAACCAAAGTAATTTCTGAGTCAACCATCATA ACATCAACAAGAGCTACGAAGCAACTCCAACCCCCTTCAAATAGTTTGAA AATAGAAACGAGCAGCTCATCAAAACAAGCACACCTTTTGGATACCAAGG GTAAATATTCTTATTGCCTTGAATATATTGTTGTCAACTTTACCGTTATA TCACAATTTTCACCAACAAAGTAAAGCGTCAACTATTTGGAGAATAAGCA TCTAGGAATGGGCTTTATTATACAGCTTACGAGAACAATAAGTTTTTCCA GGTTTGAATCGGTATACAGTTGACTCTTGCTAATTCGAAATCGAACAGAT TTGTTCGGATAACAGAGAGATTCGAATTATAGAGAGTATACTTTAAGAAG GTTTCTCCCTCCTGACGGAATCTGCAAACAAGTTCGAATTATAGAAAGAT TCGAATAATAGAAGTTCGAATAACGAGAGTGGACTGCAATGCTTTCTTGG ATCAGTTTAGCAGGATCGAAAAAGGGAAATGTTTCCTTCTCTATTCACTT TGAATTCCTCTTCAATCAGCAGATTTTTGAACAACATATCGATTAAGGCT ACCCACTCACAAAAATTAAATTTTCACTTCTCAATGACTTTCTGTCGAAC ATGTGGTCAATGTCGTCCGCCTAGTAACAATATTATTTTCGTTTTATGAC GAATATTCTGATTTCTAGACAAAGTACAGCAAAACGAATAAAATGCAAGC GTAATATTTGTAAGACTGAATCTGCGACGAGTGAAGCTTTGCTTGTAGAA TGTTTCGGATATTTTCTTTTGGTTGAAATGATAATGGTGAGTTGAATATT TCAAATGAAAAAACGAAAAAGATTGTAATGGAAAAAAAAAGGTTTCGCTA GCGATTTTCATCTCACAGTTATAGTTCCGTCTTTTTCAAAATGACTAAAA AAAATAAAATGACTATGCAAAAGAGGATTTTCGTTTCTCTCTCAAAACAA GAAAGTTTTAAAATTATCAAAATTTCGATCGTTATTTTAAAGACAAAGAC AAAAATGATACATCTTCCGGTCGTAAATTTCCTCGTAAGCATGAAATGTC GAAAGAAAAATCATTTATAATTTATGTAACAAAACCGTGAAATATCAAGT TTCCATTGCTGCTTTCTCATGATTGCTTTACGTTAAGAAAAAAAAAATAA ACAATTTGGCTAAGAACATTGATTTATGCTTATAAATTAGTGATTCTAAT AGATAAAGATTTTTCTTCAGCCAAAAAAAAAAATTTTTAATGAAATTCTG CTTGAGCCAACTTTTACCTTTCATGCAAAAGAGAGAAAAATTTAATGATC CAAATTTATTCACCAAGTCCAAAAAACCAAATTTTTAGCCATTTTTTGAC AGAAACTTACTCAAAAAACTTTCTTTCCGAAAATCGTGATCCGTCACATT TTGGCCACCACCGTTTTGCACTTTTGTAACAAAAATCAAAAGATTCCTAT GATTCAATCCTGAGAAACGTTGGTAACAGAAAAGCGGACGATTAATTTAT AGGAAATGGAACGAATCCTGACAAAACTTGTATTATGCTTGTTATCACTG TTCAGTTTATTTAATGCGAAAGATGCTGAAAAATGTCGGATTCCCAAGGG GATCTTAACGACTTTTACTACCATCAACCTTCAAATCAGCTCAATACAGA TGGTTCCTGAAAATGCTTTTGATGAATTGCCAGATGTGGCTTTGATCCGT TTGGGTCAAAACAGTATTACAGAAATTCAACCAAAAGCTTTTTATAGTTT GCCGAAGCTTAACGAGTGATCAACCGAATCTCGTGTGATTGCCAAACAGT CATACCCAGCCCTCTTAAAGATCTCGTTATGCGTGGAGGATGTCTATTTC GTGGTCCTAATGGAAACACGGAAACCAGTAGCGGCCTGGCTTAATTTTCT TGGTGGTGCAAACTATGAAATTGGCGCCTCTGGTATTTTTGTCCTTATTT CCGCCCTATACCATTAAGTGAAACTACTGTAAGAGCAGTGACTGGTTGAA AGTAACGCCCGGAATCTCTGAGTTAACAAACTTTTATTTATCATTAAAGA TCAATGGCTGAAAGAGGCCCCAAAAATTAGAAAGTTGGCAAGAATAAGAG TTCTTTGTGTAAGAAAGGTCAACCAGTTTATAAGATATTCTTAAAGGAGA AAGTTAGTCCGCATAAGACCACAAAAACCACAGCGAACAGTTTCGACCAA TCTCTCATTTTGAAGGTGAGCATCCTCTTTAACCCCTGGTGGATACACAA CACTTCTCTTGCTTTGACTTTTCGCAATTAAATGTTGATAGTAGTTTTGA AAAAATTCGTAAAATAAAACGAAGCGCCGCAGGCGAAAAAATTTACATTG CACTTATAGAAGGCGCTAAAAATGTGTCAAAGGGCGCAAAATCGCCCAAT CAAACATCAAAAATAATTTTGGCGCCCCCTTGAAAAGCTTTTTTGGCGCC CCNTAAAATAAAACGAAGCGCCGCAGGCGAAAAAAAAATTTCAGCGCTAA AAACGTGTCAAAGGGCGCAAAATCGCCCAACGAAACATCAAAAAAACTTT TGGCGCCCCCTTGAAAAGCTTTTTTGGCGCCCCTCTCAGGTCTTTCTGGG TGGTGCACTGCACACCCTGCACCCCCTGCCAGGCCGCCACTGACGGAAAC GGAGACATTTCATCTATCACTTAATGCAGAGGTCGATTGTCAGGCATGTG CACATAAGAACTGTGGAAATGGCTCATGTGTCCTTACAAATCAATGCCGA CCCATTTGTAAATGTTTTACTGGCTTCTCTGGTGATGGCTGTGAATTTGA AAATGCAGTTTTGAAACACCACTAATGGTTACTCGTTCCAAGGATTGAAA TGCAGCATAATTCTTAGCATATAATTTTAGTTTTGACCTCGTCAACTGGG TGAACAATTTTTTCAAAATTTTCTTAGCAAATTTCGGACATCCTGATAAT AGGGCAAAAAAAGGAAGAGCTTAAAAAAAATTCAGGATTGGGTATCAAAT GGTTGAAATAAATGTTTGAAAAGAAACCTTTTGAATAAAACGTTTGCTTT ACCAGTAGAATATTAAAAATTCATTTTCTGCGTTTTGTTAGAGGAAAGTA AAACTAAATTGCAATAGAGATAAAACCTGAAAGTGTTTTCCAACATAGAT AAGATCTGTCGTAAAAACGCAAGCAGCCTGTTGAGGTCAATAGCGAACGT GACTTAAATTAAAAAAAAGAAAAATGAAAATACGTAAAAGCTAATAGCCA CTTTAATTGTCCCTTTACAATTAAAAATATAATCCAACTTTTGATTCTCG TTACATTCGAGGAAAAAACTGTTTTGAATAAAAAATGATGACGAAATTAC AGACGATTTTAACTTTTCAAGAGGTCGTATCCTTCCGTGTAATGATCTTA AATCAGAAGGTTTAATTGAATCCAATATGTCTTCCTTGTTCCTAGGAGTG GTATTGGGTGAACATTAATTTGAAGAAGAGAGCATGCTTAGTATATGATG TATGAAGAATCGTGTTGTTGTTTTTTGTTGTTGTTGTGAACGATTAGTGG TTGCTTCCTCAAATATTCCTCTATATGTGGCGTTCATTGGTGTTTAACAA TCAACAATTTATGTCATAATTAACTTCTTTCTCATTAAAATAATCGTCTT CTCAATTAACCCGAAACTTTTGTGAATGTGTGGTGTTGTACTTTTGTTAC ATTTATATCGAGACAGATCTCATGAGATTGATATCTTTCTTAGAAATCTT TCATTGATGTGATTGGATTACAAAACATGCAGTTTTTCAAATTACTTGTG GTTGTTTTGAATTTTCACTGGGCATGCGCACAAGAGAAATGTCCCTGTTT TTGTGACAGTAGCAATCGAATGAACTGCGCAAATCAGCGATGGAAAGATA TACCGAAAAATATTCCAAGTTTTGTCACCGTGATCAATATGCAAATCAAC CGTGTAGTGAACATTAAAAGTGACGCTTTTCAAAACTTGAGCAACGTTAC CGTGTTGCGATTGGACAGTAACCGTGTCACTAATATCAGAACAAATGCAT TTAGAGGGATGAAGAAACTCAACCAATTAGAGCTCACAAGCAACAGAGTC AATAAATTTGACTTATCTATGCTGGATCCTCAGTCTCCATTGAAAGACGG TATTATCCTGAGGAATAACAGATTAAAGACGTTCCCTATGGACGTATTAA TGCATTATAAAGTGCCTATTGATGTGAGTGGGAATCGCATCAGATGTGAT TGCTTGTCAGTTATACCACAAGAACTGAAACATTTGGTGACGGGGTCATG CGATAAACCAAAATGGGTTCAAGGAGTCAAACTAAGAGATTTAGAATACA AAGATGTTGCATGTGATGCTTGCGAAAGTTTGGGATGTGTCAATGGTTTT TGTGAAGCCACAGGAAATAGAGCTTTTTGCACATGCTCAGAAGGTTATAT GGGCCGTCTTTGCGACGAGGGTGGTCCTATCGTAGCAACGACAGCGTCCC TGACAACTAGCATAACACCTGGTGTAATTGAAGTTACAAGATCACCAAAC ACATCACTTATAAAAGTAACGAAATCAACAAAAACAACCATTTCTGGGAA CTTAACTGTATCAAAAGGTCCTATTGTAACACCAAGAGACAAACGTAAGA TCTTTATTTTCATTGAAATGACGTGGTTATGACAGGATGTCGTGAGACAT GTCATTTTCTCCACGTCAGTGGTATAGAGCGTTCTTTGACGTACTTTTCT ATCCTTCCTCAATTTCTTTCCTCTAACCATTCCACAACAAATTTAGAATG AAACTCGTTTTTTGGCCATATTTGAATTCGAACTAGCAAATCTGAAGAGG TGTCAACATCCTGAATAGCCTATACTAGACGTTACCCGCGTTTTTTTACG CAATTAACGTTTATTCCACTTTGCGACTTTTTCGAATATTTTGAGCGCGG GTTTTCGGGCTCTAAACATTCGATTTTTTTGACGTTCGTTTTAACTTTCG AAGCTCCTGCAGTAGCAAAATAATCAAATCTGCGTCAAAACACTTGAAAG GCTTCTATTTTTCGAAAATCGTCAAAGTGGAACTCACTAAGAAACGAGAT GAAAAATCCCGGTTTTTAGTGAGGTGCTCGCTAGATCCTGAAGTGATTCA CGAGAATAATTTGGCAGTTTGGCACGTACATGCGTACGGTCGAAATTTAT CAGGGTTCATCAGGTTCTCAAAGTAAAACAGATTTCAAGTCTTTAAGCAG TCAAAAGTTATATAGAAAAAAAGTCACCACACAAATTGAATTCATATTCT ATTGGAAAAGCTTTGAACCCGAATGGATACATCAATGAATAATATTTGAA TGTAATATTTGGGGAAAAGGGATCTTATCTAGCATCACAAATCTCCTGCT GTGAAGCATATCTCTCGTAGAAAGTCTTTCTGATTGAAAAATAGAAAAAA CAAAGCCACAATTACAATCATTTAATATCCATTAATTAATTACAAATAAA TTAATTGGTTTATTTGATCTTTTTCATCATGATACAGCAAAAGGCTAAAC TAAAATTATATCAGTCATTAACTCAAGGACACCATTCACCAATTAACCAA GTCCATCTCAATCTATCTCAATCGAAATATCTGACTAATACCATTTCACC ATGCCCATTATAATAACCGTGATACTGAACTTGCATTCTTTGACCCTGGT ATCACATCGGTGAAAAAGACACTGACTTTCAAATTTGTTTTTTCGAGCTT CAAGGTTTTTGTTTTCCTCGCTTCAAGACAGTTTGCTTATGACAACAGAT AGTTCTGTAAGAAAATCAAGCATCGTAATATCACATTTGATGAAGGAGGT TGCTATTCGTTTGTATCATATTTTAAGTTATTTTTTTCTCGACAGATCCT TATGTTTTGGTGAACCATAATCAACTCCAAACACCCAACATCAAAACAGG TGAACGTCTCGTTATCAATGGCTGTCGGTTCCGTAAAAATGGGCCACCGA TAACACGTGGCAATTACGATCCTGTCTACATCCAAGATGGTTGGAACATT ATAGGAACAACAATGACAATGATGGATGCGTCAAACCTGTACCAGATGAC GTCATTGGAGTTCGCCAAATCTGCTCCAGAGCATGTTGGCTGGTACAGAT GCGGCATCAGACACAAAAACGGTTCCATGATCAATATCGATAGTCGGCCA GTTTATGTTTCACTTCAAGGTACGTTTGATGGAGAGCTGGATCGATTTCC ACAAAGAAGAGTTAAAAGCCTCGCATTATTTCCAAGTTAAATCCATGTTT ACTCCGTTGCTTTTATTAAAATCAACAAACTCTTGAGCCAATCAGACGGT TGGTAATACTGAACTTGATATCATAATATTCATTTTCTTTCATTATAGAT GTATCTGTAAGCAGATTCAGAGTGAAGGCAAGTGAAAAAGCCGAGCAAGC TGAAGCCGATCAGATCAAATTGAGGGTAAATATTTTGATTAGTTTCTTTA CTGGTGTTTCTTTGTTGACGAGTTTTCTGCTCAGTCAACCTGAAACTGCA TGGTATGACGTCATAACTCCACCATACCATTTTTCTTTTTCTATTTAGTT TGAAATGTTGATCGAAGATTTAGATTTGAAAAAGCCAGTGACAGTACAAA ATGCCAAGTAAGTTAATTCGTTCATTCCTTGTTAATGCCTTAATAATATA TCTTTAAACTTTCGATTTAATAATAGCTAGTGAAAAACTATTACAGGGAT TGAATATAATAATTACAGCAAATAAAAGAGAACTCGACTCCAATATATAA TCTATCATTATTTCCAGAATCATGACACATATCAACGGCCAAACATTTTG GCGATCCAAAATCCTGGTCAGTGATGTGTCTTCGCCTGAGGAGAAACGAA AGGTTTGTGGCGTCATGCATGACCTTTCCGAACAAGGAGAATTGAAAGCA GGAGTAGAGATCTTGACACCAATGGGTAAGTCTGCCAGGAACAAAATAGG CCACCTTTTCAGTAGAATTTGCATACTCAGTATTTGACTTAACTGTTATT GCAGTGACTTATATCGCTAAATCCGATCATGTATTGGCTTGATTCGATAT TCAGTAGATAAATAGATTACAACGTACATAAATTTGACACCATTTCTACG ACCGAATCCCAGCTCAGTCATCAAAGAGTGTTTCTTTTCTATGTAGATTG TTGTGTTGACAAGGAAAAGAATACACCAGTTGCAATTGATGACACAATCA AACGACAATGCAGAGCAGGTTCAAGGAGAACGAGTGAAAAGAAATGTCAT TTACATCCAGGAGAGGGCCCATCGTGGTTGTATTTATCAAGATGTCCACC TAACCCAACCAAAGATGCACTCAAAGGACTGAAAAGGGTAAGTGTTAAGT CTATCCAAATAATATACATGTCTAACTAAGCCTTTACAAGGATTGATCGA AGTCTGAGGCTGAGCATTCTTTGATTGAAAAACATATGATTGTGTTTGAT TTTTGTTCTGAAACTTTATAGGCTCCCACATGCGAAAAGGGCGAAGAACG AAAAGAAAATCGTTGTATTGCTGTTGAAGAGAAAGCCAGCAAACTGAAAG ATTTGGTGTCGAAAGGACATGCCATTAAAGACGAAGAAGACGTGACGTTG ACTGCAGATATCGTGGAAGAGATCGCCAAAAATGTCGCCTTCAAAGGGAA AGGTGGACAGAAGAGAGAAGTCACCGTCAAAGAAAAGGTATACAATTCTT TTTACAATCGACAGTAATCATATTTTTCACTAAATTTAAGTCTTCAAAAG GTACAAAAACTAATCTAAGTACTAATCAATATCAAATTCTGCAGAATTGC TTTCTTTGTCAAAAAGAACTTGACAAAAATAGGATTAGATATCAAGGATT TAAATCGAGTGTGAATTGTTTCCCAAAGGTCAGGTTTATTACGTATCAAA TAATACGCAATGTTGACCTTTTCAGGTTGCATCAGATACTCTGTTCGCAG TTAACGACATCATGAAAGCCAATGAGAAAATCTTGGCTAAAGCTCAACTC TCAATGAACACTTCAACCAAGATTGTCAAATCGTTGGAGAAGATCTCAAT TTCAATCGCCAAAAGCTTGAACAAATCACATCCTTCGTTTACCTTTACTG ATAGCAATCTGGCCATGACTATATCCTTGGTCAACCACAACCATTCTAGC ACATCAGTGGTCACTTATAAAGAACCCATTCAACGTGAGACCACTCTAGG TATTTATGGCAAGGAAATTGATCTTGTAACTGATAAATCAATGAACGGAA TGGTGGTCTTACCGGAAACTGCTGTCACCAGTAACAAATCCATTGCTCTT CGCAGCGTAACTTATCGAAAAGGTGTCTTTTTCCTGAACCAACATCAGCT TGATAACATCACATCGGGCGGACAAGTGATCGAGCACGCGGTCGGAAGCA ATGTGTTATCCGTATCTGTAGGAGAGGAAGAGAGAAGGACAGAATTAGAA GAACCAGTCACTATCTCCTTTCGAAATGATTCTCAAAGTCTTGGTACTGG TGTCATCATGTTTTGGGATTTCGAGAAAGGTGAATGTCATCATTTTTTGC TAGGGAAGTGGTCTTGTAACCCCTTCTACAATAGTCTCAATTACGCACGA AACATTACCCAGCTTTTCAGAACTATTCGTCCATACCATTGATTTCAAAA CCAGGATCCGAAACTCTTTGATAGGAAATTGAGCCTCTTATTTCTGATAC TAAACGAGTGTCCCATGTGGTTTTCATACAAACGCCAGGTTGAAAGTAAA GTCCATCTTAAGGTTTCCCTTTTTTGCTTGAGAAAGGTTCAAGATACCTC TCTCTATCCCCTTCCTCAATGGTCCATTTTTAAAAGCTCACGCTATTCCT AATGAATCTAGTTAAACAAGATTAAGAATATTCTTTTTTTTATTTAAAGG CGATTGGTCTGGCGAAGGCTGTTGGCCGATCAACGAAACCAAGCCAGATA TCATTTCATGGAATTGTTCTCATTTAACCAACTTTGCCTTACTTATCAAC GTCAATCAAGATTTCAACAATCCATTCGCATTACAATTATTGACATACAT TGGAGGAGGGATTTCGATCGGTGCTTTGTTGATCACCTTGTTCATCTACC TCTCCATCAGGTAAGAACATGAGAAGTTCGTTGAGTGCATGTACAAATTA TTCGTAAACCTGCTAGAATTAGATAAAAAGGCCCTTACCTAAATTTCAGC ATTATACATGTTTTTTCTTTTAAAAGCATACCGTTTATAAGCATATGCAG GCTCAGTTTTTGGTACCTAAACAATGGCTCTATTGTTTGAGAACAATAGA ATGCTAAGCATAATGCGATCCTGATATAGAGACAAAAACTTGCTTATAAA AAAACATGTAATATAAACCTAATAATATAAACCTAATTCTACCGGACTAG TATAGTACCCACTAGTGTAGATTTGATAATCCATGTAAGATTTTGAAAAC CATTCTAGCGATCATAGCCTTGCAGTTAAGCTCGGCGTTTGTTCCTTTAT CCATATTATGTTTTTTTAGGGATGAAGAACAAAACATTAGTTGTTTGTAG TAGCATCGAGCTTGCTTGGCAAAAGAGATACATTTAGGACATAAAAATAA TTTTGCCAAGAATTCAACCCACCGAGAAATACACCTAAATTCAGACCCGC TAATACAACGAAACAGAAAATTACCAAGTAACCCAAAACTATTGTTCCTT TTCTTTTTCAGAAAATTACGTCGTCGTTTGGCACCTAGACTGTTGATTTG CCTTTCTTTATCTCTCCTCCTTCTACTGGCCGCTTTCATCGGTCTTGTGG ATAAAACCCAATGGAAGCTTGGATGCAAAATCATCGCTGGAGCCATTCAA TATTTGACGTTGGCTACCTTTTTCTGGATGTTTTGCGAAGGGATTAATTT GTATCGAAATTTCGTTATCCTGTTCAAGAAATCACCTCATGAAAATATCG TTTTCGTCAAAATGTCCGTCTTCGCGTGGGGTAAGATTCAATAATAGTAA TAGATTTTATCCTCATTGATAATATACAAAACTAGAACTAAGTTTGCGTC GTTAAACGGAAACATTTTGGAACCACGAAATCAATAACCTAAAGATCTCT AGACTAAAAGGACCAAACGGTGTATCCTGATTTACGACTGAAATCACACG ATGTTCAAGTATTTAACCTTTTACCACGTTTCACCCTGTACCACGGTAAT TTTTTCTAAGTTTTTTAAAGAAAATCGCTGGTCCAAACTTTAAAGGCTTA TATCTCCGGATCTAAAGGAGTTAGAAGCTTGTTCATAGCTCTTTGGATAG CTTAGAGTCTCCTCTTTCTTTTAGGCGCCGCAAATTTTTTTCCGTAAGCG GCCCAAGCCCTGATTTAGCGGCCCAAGCCCTGATTTAGCGGCCCAAGACC TGAATTACCGGCCCAAGACCTGGGAAACTTTGCGATTTTTGAGACTTGCT TTTTTGCCATGATTTTTGAACTTACAGTGGCCCCAGACCTGAATTGTTGG CCTAAGAATTTCTAAAAAACTAGTAGAACACATTCATTAGAAGATCATCA AATTGAAGTACTTTTCCATGGGAATACAACGGTTCGATCATCTTCTTTTT CCAAAAAAGCAAGTCTCAAAAGTCGCAAAGTTTCCCAAGTCTTGGGCCGG TAATTCAGGTCTTGGGCCGCTAAATCAGGGCTTGGGCTGCTTACGGAAAA AAAATTTGCTACGGCGCCGCTCGATTAAGGAAGGGCGGGTCGGGCGGCGA CTAAGGGAGGGGTAAGTAAGGGGAATTAAAGCAGTCTGCACGGACCTGAC TGAATGATAGAAAGGTGCCCAGTAGTAAAACTTCAAATTAATTCGCTAGA GGACAGAATCAAGTAAAGCAGGGCCAATTTTGGAGGTTCTTGGATCACTC GTTCACCAAAAATGGTCAAAGAACGGTCAAAATCTTAAAAAAGTGGATTT TTGTCAAATTTTTGTATTTTTTTGACTTTTTGGCTCAAAATCTCGCTGGA AAGACTCAATTTTGATTTTTTTTGCTTGACCATGAAACCTAATCAAATTC CTACAGTTAGACCAAAAATGACGATTTCTAACGCAAACTGGGCATTACAG GAGGGCTTCGTCATATAGCCCATGTCTAGTATACTCGTCATTGGTAGTTA AAGAGTTAACATAGATACTCAATAAACATCTAAACCCCTCTCAAGTACAG AAAAAATAATGAAGATATTTTTATTTTTGTACAGGAACACCAGCAGTGTT TGTCTTTTTGACTGTCTTTCTGCGCTTGGAAGAAGTTGGTTCGAAAGAAA TGTAAGTTCTCTTCATTATTTAACTTTCTCGTCTTGTAACATTGCTTTCA TTCGGAAAACAAAGTCTACTGACACATGTCAAGAAACTAGGTTCCTCAAA TTATTCTTTACAATGACGTTTTTTTTGTTTTTTCCCTTAGATGCTTGGTC CATGGAAGTGCATTCTATTTCGGAACCTTACTCCCTGTTGGGCTCATACT GATTTTCAATTGGATCGTACTTGTGTTAGCCATTCGTGGAATGAAAACAG ACAAAATTCTCCATAACAACAAACGACAAACACCAACATGGCTTGAAATA TGGCGCGCTTTCATTTGCTCCATCATCTTGGGTTTAGCCTGGACATTTGG TATTTTTGCAATTGGAGATTTGAGAGATATATTTCAATGGTTGTTTTGTG TGTTCAATGCTTTTCAAGGACTTTTTATTTTCCTACTCTTCGTGGTAAAG AACCAGGAGGTTCAGAAATACATTTTGAAAGTTTTCAACCATAGCACGGT AAGCTCAACAGGGAATTCTTTGGATAACGCAACGATTAAAAATGGCTGTT GTCCAGCAAGCCCTGATTGCAAAACCAACACAACCCAATACAAACATTTA TCTTCATNTTAAAAATGGCTGTTGTCCAGCAAGCCCTGATTGCAAAACCA ACACAACCCAATATAAACATTTATCTTCATGTAGCTTTGGAAATACAAAT GTTTAAAAGAGACTATGATGTTGAAAGGCACGAATACGGACAAAAATTGA TCCGGGATGAATCACATTGCCCGAGGAGATCAATAATTTCCTTTTTGGTA TTGATGACGGTTACGATTGGAACAGTATGGTGGTTCTTGAGACAACTAAG AATATTCATGTAAATAGTTTGAAAATGTACTTATAGCAATATTGTAGAAT ATTATAAAAAACGAAAAATCAAACGATCTTAAATTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002287XLOC_002287Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004106-exon-sc0000039-1575043694:260918..262067TCONS_00004106-exon-sc0000039-1575043694:260918..262067Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:254799..255122TCONS_00004106-exon-sc0000039-1575043694:254799..255122Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:254543..254619TCONS_00004106-exon-sc0000039-1575043694:254543..254619Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:254361..254419TCONS_00004106-exon-sc0000039-1575043694:254361..254419Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:254043..254200TCONS_00004106-exon-sc0000039-1575043694:254043..254200Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:253631..253821TCONS_00004106-exon-sc0000039-1575043694:253631..253821Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:253281..253496TCONS_00004106-exon-sc0000039-1575043694:253281..253496Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:252439..253042TCONS_00004106-exon-sc0000039-1575043694:252439..253042Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:251858..252068TCONS_00004106-exon-sc0000039-1575043694:251858..252068Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:250988..251256TCONS_00004106-exon-sc0000039-1575043694:250988..251256Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:249667..249733TCONS_00004106-exon-sc0000039-1575043694:249667..249733Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:249073..249527TCONS_00004106-exon-sc0000039-1575043694:249073..249527Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1575043694:248730..248999TCONS_00004106-exon-sc0000039-1575043694:248730..248999Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:260918..262067TCONS_00004106-exon-sc0000039-1510915933:260918..262067Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:254799..255122TCONS_00004106-exon-sc0000039-1510915933:254799..255122Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:254543..254619TCONS_00004106-exon-sc0000039-1510915933:254543..254619Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:254361..254419TCONS_00004106-exon-sc0000039-1510915933:254361..254419Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:254043..254200TCONS_00004106-exon-sc0000039-1510915933:254043..254200Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:253631..253821TCONS_00004106-exon-sc0000039-1510915933:253631..253821Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:253281..253496TCONS_00004106-exon-sc0000039-1510915933:253281..253496Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:252439..253042TCONS_00004106-exon-sc0000039-1510915933:252439..253042Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:251858..252068TCONS_00004106-exon-sc0000039-1510915933:251858..252068Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:250988..251256TCONS_00004106-exon-sc0000039-1510915933:250988..251256Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:249667..249733TCONS_00004106-exon-sc0000039-1510915933:249667..249733Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:249073..249527TCONS_00004106-exon-sc0000039-1510915933:249073..249527Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1510915933:248730..248999TCONS_00004106-exon-sc0000039-1510915933:248730..248999Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:260918..262067TCONS_00004106-exon-sc0000039-1491911889:260918..262067Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:254799..255122TCONS_00004106-exon-sc0000039-1491911889:254799..255122Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:254543..254619TCONS_00004106-exon-sc0000039-1491911889:254543..254619Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:254361..254419TCONS_00004106-exon-sc0000039-1491911889:254361..254419Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:254043..254200TCONS_00004106-exon-sc0000039-1491911889:254043..254200Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:253631..253821TCONS_00004106-exon-sc0000039-1491911889:253631..253821Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:253281..253496TCONS_00004106-exon-sc0000039-1491911889:253281..253496Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:252439..253042TCONS_00004106-exon-sc0000039-1491911889:252439..253042Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:251858..252068TCONS_00004106-exon-sc0000039-1491911889:251858..252068Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:250988..251256TCONS_00004106-exon-sc0000039-1491911889:250988..251256Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:249667..249733TCONS_00004106-exon-sc0000039-1491911889:249667..249733Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:249073..249527TCONS_00004106-exon-sc0000039-1491911889:249073..249527Clytia hemisphaericaexon
TCONS_00004106-exon-sc0000039-1491911889:248730..248999TCONS_00004106-exon-sc0000039-1491911889:248730..248999Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:248730..262067 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0701286 0.0298507 0.111006 0.0158776 0 0 0 0.0633893 0.0293767 0.0462098 0 0.036444 4.30015 2.82472 3.58856 4.29518 0.299807 1.68603 0.388966 0.606117 0.0974374 0.0566151 0.0408127 0.0330576 0.0463655 0.0369307 0 0.0540525 0.0377911 0
Blast
BLAST of TCONS_00004106 vs. Swiss-Prot (Human)
Match: AGRE3 (Adhesion G protein-coupled receptor E3 OS=Homo sapiens GN=ADGRE3 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.660e-25
Identity = 106/377 (28.12%), Postives = 183/377 (48.54%), Query Frame = 1
Query: 2572 GVFFLNQHQLDNITSGGQVIEHAVGSNVLSVSVGXXXXXXXXXXPVTISFRNDSQSLGTGVI--MFWDF--EKGDWSGEGCWPINETKPDIISWNCSHLTNFALLINVNQDFNNPFALQLLTYXXXXXXXXXXXXXXFIYLSIXXXXXXXXXXXXXXXXXXXXXXXAAFIGLVDKTQWKLGCKIIAGAIQYLTLATFFWMFCEGINLY---RNFVILFKKSPHENIVFVKMSVFAWGTPAVFVFLTVFLRLEEVGSKEICLVH-GSAFYFGTLLPVGLILIFNWIVLVLAIRGMKTDKILHNNKRQT--PTWLEIWRAFICSIILGLAWTFGIFAIGDLRDIFQWLFCVFNAFQGLFIFLLFVVKNQEVQKYILKVF 3672
              FF    + D +    QV+  A+G    +VS+ +          VT++F++   +  T  +  ++W    +   WS +GC+ I+  K   +  NCSHL++FA+L+ +     +P  L ++TY+G  +S+  LL+    +L  + +R       L       L  L   +G +D+T+ K+ C IIAGA+ YL LA F WM  EG++L+   RN  ++   S +  + ++   V  +G PAV V ++        G+ + C +H    F +  L PV  I   N ++ +L    +K      N++  T   T +  ++A     ILG  W  G+  +G    +  +LF + N+ QG FIFL++ + +Q+VQK   K F
Sbjct:  251 ATFFEEMDKKDQVYLNSQVVSAAIGPK-RNVSLSKS---------VTLTFQHVKMTPSTKKVFCVYWKSTGQGSQWSRDGCFLIHVNKSHTMC-NCSHLSSFAVLMALTSQEEDP-VLTVITYVGLSVSLLCLLLAALTFLLCKAIRNTSTSLHLQLSLCLFLAHLLFLVG-IDRTEPKVLCSIIAGALHYLYLAAFTWMLLEGVHLFLTARNLTVVNYSSINRLMKWIMFPV-GYGVPAVTVAISAASWPHLYGTADRCWLHLDQGFMWSFLGPVCAIFSANLVLFILVFWILKRKLSSLNSEVSTIQNTRMLAFKATAQLFILGCTWCLGLLQVGPAAQVMAYLFTIINSLQGFFIFLVYCLLSQQVQKQYQKWF 613          
The following BLAST results are available for this feature:
BLAST of TCONS_00004106 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRE34.660e-2528.12Adhesion G protein-coupled receptor E3 OS=Homo sap... [more]
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