TCONS_00004087 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004087
Unique NameTCONS_00004087
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1625

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004087 ID=TCONS_00004087|Name=TCONS_00004087|organism=Clytia hemisphaerica|type=transcript|length=1625bp
AGATGAAAGACTTTCTGAgtAAATCTGATTTGGAATTGAAGAGTGACTGT
TTGGGCAAGTTCAGATAAATGTCTCATTTGTTGAATACTTTCCATCGATT
TTTTATTTACTGGGATTTTTTGTACGCTTGAACGCGACAATCGGTCCCTC
ATTTTTGGTTAATCTTCGTATCAACATCATCTTGTCAACGCTATCCTTTT
TTGTCGCCACCTGTCCAAGTTCTTGTCAATTTTGtgcgaccatcaaaaga
tagcAAAATGTTAAACCGAGTTTTAAGAaatcaagcACTCAGAGGAAGCA
ATTTTTTACGTCGAATCTCATCAACATCCTCACCGAAGCGTGCCTTACCT
TCCATTGATCCAGGGATTGAAGAAAGTCCTTCCTTACCTGTCGTTAATGC
TCACAATGAATGGGATCCGCTTGAAGAGGTCATAGTCGGCCGCGCGGAGA
ATTCAGTGGTGCCAAATTTCACGACGGAAGTCAAAGCCAACACGTACGAA
TACCATTGGGATTTTTATAAAGCAAACAACGGAGAATATTTCCCAGCTGA
GCATCTAAAGAAAGCAGTTGCCGAGATCGAGGAATTTTGTCGCATTTTAG
AACACGAGGGTGTGGTCGTTCAAAGGCCTGACATTATTGATCACAAGAAG
AAATATGCTACTCCTGACTTTGAGTCAACTGGTCTGTATGCAGCTATGCC
ACGTGATATACTTATCACCATTGGCAACGAGATAATCGAGGCACCGATGG
CATGGAGATCAAGATTCTTCGAATATCGTGCCTACAGGAAATTGATGAAG
GAATATTTCCGTGCGGGCGCCAAATGGACCACAGCTCCAAAACCTTTCAT
GTCTGACGATCTTTATGATATGGACTATCCGATGAAGAATGTGGAGGAAA
GACATCAACTTGCTTCAGAGAATCGTTTCGTGACAACCGAATTCGAACCG
TGCTTTGATGCAGCGGATTTCATGAGGGCTGGTACCGACATTTTCGCCCA
ACGTAGTCAGGTCACCAACTTGATGGGTATTGAGTGGATGAGGCGCCATT
TGGGAGATAAATACAATGTTCATCTACTGTCATTCAAAGATCCTAATCCT
ATGCATATTGATGCTACCTTCAATATTATCGGACCCGGGCTAGTCATTGT
GAATCCTGAACGACCTTGTGAACAACGTGATATGTTTGAGAAAGCAGGAT
GGAGGCTAGTGGAAGCGGCTTATCCAACAATTTCCGATGCGCATCCTCTT
TGGATGAGCTCCAAATGGTTGAGTATGAATGTCTTGATGTTGGACGAGAA
ACGTGTTGTAGTGGATGCCCACGAAATACCAACACAGAAGaTGTTTGAAT
CGTTGGGTATCAAATGTGTGAAAGTTGACATTCGTTACGCGAATTCTCTC
GGTGGTGGATTCCATTGCTGGACGTGTGACGTCAGAAGACGTGGTGAACT
ACAAAGCTATTTCTAATATACCAttcattgaaatgaatttttttttatgt
tattcGCACGGAGGCAGTCCCGGCACGCCAAATATTAGATATACCGGGTg
cagcagaaaaaactttggacgtttggcgagccactgaggccgaacaaagt
cttgtttagactcaaaaccactttt
Run BLAST on NCBI

transcript from alignment at sc0000039:873576..882173+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004087 ID=TCONS_00004087|Name=TCONS_00004087|organism=Clytia hemisphaerica|type=transcript|length=8598bp|location=Sequence derived from alignment at sc0000039:873576..882173+ (Clytia hemisphaerica)
AGATGAAAGACTTTCTGAGTGAGTTTCTTTGTCTAATTTATGTCTAGTTC AGTTTTACATTTAGTGAGTGTTTATTCCATCATCAATCATTTTCATCCCA TGTGAATATGTAGGAATGTGTACTAGTCAATGATGAAAGATCCTTCATTC AGTATTGTCATTCAAATTCTACTATATAACAtgaaatcttttttcacttt tcaggtAAATCTGATTTGGAATTGAAGAGTGACTGTTTGGGCAAGTTCAG ATAAATGTCTCATTTGTTGAATACTTTCCATCGATTTTTTATTTACTGGG ATTTTTTGTACGCTTGAACGCGACAATCGGTCCCTCATTTTTGGTTAATC TTCGTATCAACATCATCTTGTCAACGCTATCCTTTTTTGTCGCCACCTGT CCAAGTTCTTGTCAATTTTGtgcgaccatcaaaagatagcAAAATGTTAA ACCGAGTTTTAAGAGTAAGTACTTGCTTTTTCAATGTTTATCTCTATTAG AAACTATTAAAAAGAcccccctgtgtcacagacccgctggaccCTAGCCC CAAtgaaaaatttggtaaaaattttgtccatggtaggaaaataccctgaa atttcagccccactgggaaattgactttgatttcatccccactcgaaatt caatgtttacgAATTACAATCCAAAACCACAACCTCACTAAATTCTTAAC CTTTGGACAATAGAATtgctatccccattggaatttcaataggaattttt atccccaaaatggaaaaaaatcccaccggggctgtgagacaggggtgtaa agagGAAATACGCAGTGTGAATCCCTTTTTACATTCAGTTACAtaaagtg gattaattttcgcgtggagTTTTATTCGTGAATCTAGATTCTAAAATTTT CGTGGGGCCtctttttcaattaatttctttaattttcctaGGGTATTTGG CGGAAATTCGGATTTTTAATCTcacgattgaaattcgattgacgttttta cTTAccttaatttgtaatttcccggaattgttagaatttcaatccaaacc atgagattaaccaggaaacCCATGCTTGTTtccgtgaaattctggataaa ttaccctcggtcaaatttcgaaatgttttaaatttcaaaaaatttcaaaa tttacctCAGGAAATTTATCCCCaatttccctcataaccatgagattact agtacaaattttTCGTGAGGActgattttcgcaaaaaatgaccaaaattc cATACGAAATGTAATCCATTAAAGATAATAGGGATATGTTCTTCGCGGGG GAGGTAAAGATACTGATCTACTTGCAAAAAATGTCGGCAGACATTGCACA GATGAAGGGTGGTAAAGTCATAAGCAAGAAAATGTCTCTCATTACCTCAG GTTTTAATTCTATTTATGTCACATGAATCGATTGATTTATGATCAATTTC TTGTTCGAAAAAGTCGAGAAAAAAACACCGAAATTAGAAATAtatcggac ggaggatcgagacataaataccattagatgctagaaatttccaacatgtt tcggccagggccgttttcaaggtatatttctagctaaaaaaaatcatttt tttttttttttgtgacgTATATTTATGAGCCGTCTGTAAGTGATCTGGAA AATTAGAAATAAgtatacagtatgtggcccccaaaacggcgatcaaattt aaaatttctctcaaagctacaatcagtgacgaaaaacttggcacaaaaag gaaacccaccggggtgttttgaaaccacaatcgatttgcaagtgctctaa agtaggttcgaagggtagagttttaactctgagttttaacgctagactta aaacttaggacttaggatctgaggattcaaaagttcaaaaatggtccagt agggcttgaaatatagcctagaaaccaataaatccctcccagatcgaaat aatcgttgaaatcaagttgaaggcccgaaattgacattcaagctcgaact tcaatttttgaaaaatggtaaattagcgaaaagtgccaatatgttatggc actgattgtagaggaaaagaggttttacaaaaatgtttcttgcatgcaaa actttaacatctctactttatttcccgacagttctttttcaaaattttca atttcaacaatatttttcaatcgcttaaagataggtagcttttaaataaa tttttacagtataccctggctgtcaaaatgcaggtttggggcccccaaaa cggaggtgtagttaaaatcaaatttttaagcCCAGTGCTAATAggaggaa aaactatgaacatatttgtgtttacccttaaatttacgacccgatagatg taaaatttatgatttttatgaaatatttcgatattgcaaaatccaaactg aaaatttagaaattttcaaaatgacaatttagatttaacaacgtcttaat caagtttctgaaaatcaatgtcttttgaaaatagttccattcNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNttccattcatgtatggaaaaagctg tgaaaatttgagaagaaaagcttaactgaaactgaaaatattaagcttta aaggtatttttctcctatattttgcaaaaaagctgattcagcgaaaattt ttataatgttaattttttgttataagatATTAACTCAACCTGATAaaaat ggaattccaagattttttgctgtttctcatatttagaattttcggtttta tcaatgctgattctagggtcccaaaatactggttgacctttaagaNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcctctaaa gtcacagatgtatctgcattttctgaacggcattaggtgtagaaagtttc ctataccccattttcataacttattttcaatatgcaaggagctagagtga gttataggtaaaagatgactcaagcagatttttgcaaaaaaattttgttg actcaaaaaacgcatgtttatctataagaatcactattaataagcataca ttaatgttcttagtcaaattactcaatttttttatgagatggatgttttt tttgctcatgagggttgacttttagagagtatgtgtgtttagacatgaaa ttttggttgcttaccgtgtttttatagaaaaactggccaaattcgatatt tttttataagcacattatcaattaNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNatatttttttataagcacattatcaattactta ggtattagcttttctcgagattggctctttcattctttatgattttttgc acaaagatgcataactttaaatcctcaaatgtgacggagcccgattttcg aaaaaaaatgtttttgggcaaatttgggcctaaaacggctaaaaaaaggg ttttttggactttgtgaaacatTGAATCAttgcttttttctgatttttta catgaaagtaggtaaaagatggctcaagcagatttttgtaaaaatagaat ttttcagctaaaaaaacgcatctttatttataagaatcactaaagtctgt ccagatataattggcagtggaaataaaaatgcttgtaacttttgatagtc aaatataattatggaaattttttttgtttgttttagagaatcaaaagcgc tatatttgaatgtatNacctaactcgagatattaacccttgaaaactgtg tttttcagccagaaacagctattttgtccagtttttgcgctttttgaagc tcaatattaGCTAATatttgatttgttgatttttttgattttttgtgatt ttatgatttttttgcccGCATGTAAAGAATTTCAACCTCTACATGATGTT TGGTTTTATGCCAAAACTCGACTACCCGTTtacaaatttttcaaagaaat aagtATATCATAAGCTaatgaacaagaaaaaaaacatttacttgtttttt agaatcaagcACTCAGAGGAAGCAATTTTTTACGTCGAATCTCATCAACA TCCTCACCGAAGCGTGCCTTACCTTCCATTGATCCAGGGATTGAAGAAAG TCCTTCCTTACCTGTCGTTAATGCTCACAATGAATGGGATCCGCTTGAAG AGGTCATAGTCGGCCGCGCGGAGAATTCAGTGGTGCCAAATTTCACGACG GAAGTCAAAGCCAACACGTACGAATACCATTGGGATTTTTATAAAGCAAA CAACGGAGAATATTTCCCAGCTGAGCATCTAAAGAAAGCAGTTGCCGAGA TCGAGGAATTTTGTCGCATTTTAGAACACGAGGGTGTGGTCGTTCAAAGG CCTGACATTATTGATCACAAGAAGGTTTGTGTGTTTAGAAGGATTTGtat ctttataattttttttatttgataattaGGCCTAATCTTGTTTAGGTGGG atttaatgaagaaaaaactttttttggtgcaaGAAAGCTCATTTTTTGTT GCAGAGGTACTTTAAAGCCTCTTTATTTCAACTAACAACTCAATTTAATC CAGTCTCATCCTTGGAAGAAGATTAGTTCAAAAAGCAATAATATTTAATC TTAATTATTTAATAATAGTTCACAGTTCGCAAGCTTTTTACTTTTCCATA TATTTAGAAATATGCTACTCCTGACTTTGAGTCAACTGGTCTGTATGCAG CTATGCCACGTGATATACTTATCACCATTGGCAACGAGATAATCGAGGCA CCGATGGCATGGAGATCAAGATTCTTCGAATATCGTGCCTACAGGAAATT GATGAAGGAATATTTCCGTGCGGGCGCCAAATGGACCACAGCTCCAAAAC CTTTCATGTCTGACGATCTTTATGATATGGTAGGAAGAGTCGATTTCTGA TTACAAATTTTTACTCGGTTCTTTCACGGCTGCAGGGCTCAGAACCTCTA TTGATTCTAGAATTTATAGGGCTTTTCAGGGCATTGAAGGAGAAAAGTCC TTTGctaataataatttcattttggcggtaattttgatattcttattttt ttacttcatttttggtCACTACTGCTCGCTCAGGATGGCTCGGGAACTTA ATGTAAATTAGGAAAAATGACAATTGAAATCGATCATTTATAAACGCTTA GTAAGGAAATTGCATGAGTTATTATTTAAGATAATTTTCAGCCTCTGTTT TTTAGGACTATCCGATGAAGAATGTGGAGGAAAGACATCAACTTGCTTCA GAGAATCGTTTCGTGACAACCGAATTCGAACCGTGCTTTGATGCAGCGGA TTTCATGAGGGCTGGTACCGACATTTTCGCCCAACGTAGTCAGGTTTGTT ACGTGTAATCTGTTTCCCTCTCTCTGTTTTTTCatcctatttttcaaaat attttttcttttgaaaatttacctAACCcttattaccttaagggaataaa ctttcgcgaaaatttacaatcgaagttagtcgcgaaaataagtcccgcga aaattgaattattttgcGAGGGAAGctgtctcgcgaaaattagttgccgc gaaaattaattcccttaagTTACCTACCCTCCCTTTATAAGACACATTGC TCGTACCCTTTCCCTGCGATTTTAGAGAAAACTGCGCCCTAGAAGGGCGG GTGGTTCAcaccattgagtttgaagccccgaaACGGCTAGAGATCTTCAA CCtctctcaagcaagaaaaagggaAGCGTTAAGTTTGCCCTGCACTTGAN TCCCTGCGATTTTAGAGAAAACTGCGCCCTAGAAGGGCGGGTGGTTTAca ccattgagtttgaagccccgaaACGGCTAGAGATCTTCAACCtctctcaa gcaagaaaaagggaAGCGTTAAGTTTGCCCTGCACTTGAAAAACACACGG GTTACTAAATACAGGAGTTTCTAGCCCCTTTGATACTTTGAAATCAATAG TTCAAACAATCTGTTTTCTTTCGATTTCTCTGATAAAAGATATTTAGTAA TAAAAATTCGGAGTTTGAGAGCTACTCAAAAATACACTTGAATCATCATT GAAtttgaaatccgccaaatttaatttttttggccatccgccaaattaaa ttccggcCAAAATTTCAAGATGAATGGacgaaaaatcaattttccttttc attCCCAGGTCACCAACTTGATGGGTATTGAGTGGATGAGGCGCCATTTG GGAGATAAATACAATGTTCATCTACTGTCATTCAAAGATCCTAATCCTAT GCATATTGATGCTACCTTCAATATTATCGGACCCGGGCTAGTCATTGTGA ATCCTGAACGACCTTGTGAACAACGTGATATGTTTGAGAAAGCAGGATGG AGGCTAGTGGAAGCGGCTTATCCAACAATTTCCGATGCGCATCCTCTTTG GATGAGCTCCAAATGGTTGAGTATGAATGTCTTGATGTTGGACGAGAAAC GTGTTGTAGTGGATGCCCACGAAATACCAACACAGAAGGTACTTTTTCTC GTTTTTCAAATAAGGGTTATTACAGTGTGTAGAAAATGAAATCACTCAAG TTTTAGGGAAAGGGATCTTTGGTTCGGTTTGAATCACCCCTTCCTATTTA ATTTATGATACAGCAGGGGGTACAAAGTTGGGGTACTGTGTCGAAAATGT GTTCTGACTTGTTGGATTTTTCACCACCATTAGGTACAAAGTTCAAATAC CGCGATTGCCAGGTTCTGGAAATTTTTGCGTGTATTATTAagtttcgcga ttcactaaagtctgcctcaaaataatttgcagctgagacaaaaatggctg taacttttgatagaattcgaatcaagttgcgattttgtgctcattgaaaa gatatttgtgagtgggaTATTATCgagccaaaaaaaattggaaaaaaaaa gaaaaatgaaaacgaaagatgaagaagaaaaaaatcaacttcttatagaa atgtggtatgattaccattttcacaggagtgatttttcaatcttagatcc tcatcactgtgaaaaaatttttcaaaaatattcattcaatcaaaagataa caaacaaaaattattgctgTTGGACTCTataaaagagtaaaaaatgacaa aaaaaacagcctattgtccgggggggatacttaggcaaatggagggtacg gtatgtgccgcccttaagggtaccttttttggacttccaaagtcccgcta agggtcggaaaaatcagaaaatcaaatttcagtcccactaagggtcggaa aaataggaaaatttcaacttaccccctgaaagagcaaaatatggtcaaaa ttgtacccgctaagggtcgtaaaattcccaaaattttcctttgttttttc ctttttagtccccgtaagttcgaaagtcgggcggcacctcccccccgtca gctcgaaACCCTAGTACCTAGTTGGTGGGAAAGTAAAGGACAGTACCATC CCAAAAATACATATtgtaaatttcttataaaataaaattatcaaGCCCGG TACCAAAAATATCCTAATTTTTACTTcccttgaaaatttttaacagtTTC TAAGCCATTGGATGCCGAGGTGTGTTAATGGACCGTTTCCTCGCCGATCT AAAATCTTTTGGTCATGAGTGCCTTTTTAGTCTAAATTTGCACGAGTTGA AAGTCAGTTTTGAAGTGAATTTACAGCTTTACTGGTTTTTGACTTGCCAC TCTTGACCTCCAACCCGGCAGTTCCCTAAAACTTAGTACAGACCACTGGC TCACGATAcatttgacgctctctaatcTGATCTAATCTGATTTTCACGGT GACTTTCCACAATGATATTAACGAAcatatgttttttcttttataagcat aacgtttataagcatatgcaggctcagtttttggtacctaaacaatggct ctattgtttgagaacaatagaatactaagcataatgcgagcctgacatag ggacagacacttgcttataaaaaaaaaacatgtaatggaGCTTCTCTATA TTAAGTTAGAAAGCGTAGCTAGcaagaatctctaacctttcaattgttct tttttcaatttagaTGTTTGAATCGTTGGGTATCAAATGTGTGAAAGTTG ACATTCGTTACGCGAATTCTCTCGGTGGTGGATTCCATTGCTGGACGTGT GACGTCAGAAGACGTGGTGAACTACAAAGCTATTTCTAATATACCAttca ttgaaatgaatttttttttatgttattcGCACGGAGGCAGTCCCGGCACG CCAAATATTAGATATACCGGGTgcagcagaaaaaactttggacgtttggc gagccactgaggccgaacaaagtcttgtttagactcaaaaccactttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002280XLOC_002280Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004087-exon-sc0000039-1491911889:873576..873593TCONS_00004087-exon-sc0000039-1491911889:873576..873593Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1510915933:873576..873593TCONS_00004087-exon-sc0000039-1510915933:873576..873593Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1575043694:873576..873593TCONS_00004087-exon-sc0000039-1575043694:873576..873593Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1491911889:873780..874039TCONS_00004087-exon-sc0000039-1491911889:873780..874039Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1510915933:873780..874039TCONS_00004087-exon-sc0000039-1510915933:873780..874039Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1575043694:873780..874039TCONS_00004087-exon-sc0000039-1575043694:873780..874039Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1491911889:877828..878199TCONS_00004087-exon-sc0000039-1491911889:877828..878199Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1510915933:877828..878199TCONS_00004087-exon-sc0000039-1510915933:877828..878199Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1575043694:877828..878199TCONS_00004087-exon-sc0000039-1575043694:877828..878199Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1491911889:878483..878704TCONS_00004087-exon-sc0000039-1491911889:878483..878704Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1510915933:878483..878704TCONS_00004087-exon-sc0000039-1510915933:878483..878704Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1575043694:878483..878704TCONS_00004087-exon-sc0000039-1575043694:878483..878704Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1491911889:879031..879168TCONS_00004087-exon-sc0000039-1491911889:879031..879168Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1510915933:879031..879168TCONS_00004087-exon-sc0000039-1510915933:879031..879168Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1575043694:879031..879168TCONS_00004087-exon-sc0000039-1575043694:879031..879168Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1491911889:879984..880313TCONS_00004087-exon-sc0000039-1491911889:879984..880313Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1510915933:879984..880313TCONS_00004087-exon-sc0000039-1510915933:879984..880313Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1575043694:879984..880313TCONS_00004087-exon-sc0000039-1575043694:879984..880313Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1491911889:881889..882173TCONS_00004087-exon-sc0000039-1491911889:881889..882173Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1510915933:881889..882173TCONS_00004087-exon-sc0000039-1510915933:881889..882173Clytia hemisphaericaexon
TCONS_00004087-exon-sc0000039-1575043694:881889..882173TCONS_00004087-exon-sc0000039-1575043694:881889..882173Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:873576..882173 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 298.439 212.997 0 0 0 0 0 0 1.15532 1.36805 0 0 27.6324 28.1723 0 0 46.5712 47.7071 0 0 241.905 23.5377 457.266 391.145 0 0
Blast
BLAST of TCONS_00004087 vs. Swiss-Prot (Human)
Match: GATM (Glycine amidinotransferase, mitochondrial OS=Homo sapiens GN=GATM PE=1 SV=1)

HSP 1 Score: 580.867 bits (1496), Expect = 0.000e+0
Identity = 276/401 (68.83%), Postives = 322/401 (80.30%), Query Frame = 3
Query:  261 LNRVLRNQALRGSNFLRRISSTSSPKRALPSIDPGIEESPSLPVVNAHNEWDPLEEVIVGRAENSVVPNFTTEVKANTYEYHWDFYKANNGEYFPAEHLKKAVAEIEEFCRILEHEGVVVQRPDIIDHKKKYATPDFESTGLYAAMPRDILITIGNEIIEAPMAWRSRFFEYRAYRKLMKEYFRAGAKWTTAPKPFMSDDLYDMDYPMKNVEERHQLASENRFVTTEFEPCFDAADFMRAGTDIFAQRSQVTNLMGIEWMRRHLGDKYNVHLLSFKDPNPMHIDATFNIIGPGLVIVNPERPCEQRDMFEKAGWRLVEAAYPTISDAHPLWMSSKWLSMNVLMLDEKRVVVDAHEIPTQKMFESLGIKCVKVDIRYANSLGGGFHCWTCDVRRRGELQSYF 1463
            L R L     R   F    ++T+S + +  + D   E  P    V+++NEWDPLEEVIVGRAEN+ VP FT EVKANTYE +W FY+   G YFP +HLKKAVAEIEE C IL+ EGV V+RPD ID   KY TPDFESTGLY+AMPRDILI +GNEIIEAPMAWRSRFFEYRAYR ++K+YF  GAKWTTAPKP M+D+LY+ DYP+ +VE+RH+LA++ +FVTTEFEPCFDAADF+RAG DIFAQRSQVTN +GIEWMRRHL   Y VH++SFKDPNPMHIDATFNIIGPG+V+ NP+RPC Q D+F+KAGW ++    P I D HPLWMSSKWLSMNVLMLDEKRV+VDA+E+P QKMFE LGI  +KV+IR ANSLGGGFHCWTCDVRRRG LQSY 
Sbjct:   24 LGRTLTGWVQR--TFQSTQAATASSRNSCAADDKATEPLPKDCPVSSYNEWDPLEEVIVGRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFESTGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAAQGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMHIDATFNIIGPGIVLSNPDRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANSLGGGFHCWTCDVRRRGTLQSYL 422          
The following BLAST results are available for this feature:
BLAST of TCONS_00004087 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GATM0.000e+068.83Glycine amidinotransferase, mitochondrial OS=Homo ... [more]
back to top