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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004006 ID=TCONS_00004006|Name=TCONS_00004006|organism=Clytia hemisphaerica|type=transcript|length=1993bp
CCTACTTATGCCGccttttagaaagattttttttgttgacGAAATCAGAA
ATTGCAAAGCGCGGATGTGTTGTGTTAtatttcaagatggcggctcaagg
cGAGGGAAATATCGCGACTCCGAACACACTTCAATCACCTTTCGGAAACC
CTCAACCACAATCGTCTTACAGCTCATCATCACACAATATGGCACCATCT
GGCTATGGGAATCAGCAACAATCACAATCAGGAGGGTACAATGCTCCTCA
ACCTCAAGGAACTCAACTGGTAAAGGGTGCTGATGCTGGCGTCAAATTAG
AAGCTCTAAAGAAATGGACCATGTCAACGTACAAATACACCAAACAAATG
GTGTCCGAAAAAATGGGCCGTCGAACACGGACCGTGGATACCGAATTGGA
AAAACACATCCAAGGCTTAAAAGAAATGCAACTGCGCTACACCAATTTGT
TAAAACTTTCTAAACaatttcaaagtcaatttcaaaatattttggtcaca
CAGAAGCTGATGGGTGAAGCATTCAACGAGCTAGCTGTCAAGTCTCCTGA
TTTGCAGGaagaattttcacaaaatgcTGAATTACAGAAAGTCGTTTCTA
AAAATGGTGACGCCTTGATTTCAGCTCTTACATTTTTCAACGAGAATCTT
TGGACTTTATCGACTAAAACGATCGAGGACACGATTCAAACGATTCGAGA
TTACGAGAATTGTCGTATCGAGTATGATGCCTACCGGACGGATTTGGAAG
CACATGAGGCGGTCGGACAATCAATGAAAACGGAACAAGCTAGAAAAGaa
ttcaacgagcacaaagAGAAATTCGAATCTTTACGAAACAATCttcaaat
taaaatgaaatttcttgaaGAGAATAAGGTGAAGGTAATGCGAAAACAAT
TATTGATTCTGCACAACGCCCTGGCTGCCTACTTTTCTGGTAACAAGGAC
GAACTGGAAAAAACGATGAAAGAATTTCACATTCGTGTCATGAACAAAGG
CGAAGAAGCTTCCTTCCTTGAAACGCACTAAATTGAACTTGTTCCATTCA
AAAAATCTTCTAGTTACGATATGATATTTTTGGATNCTGAACTTGTTGCA
TTCAAAAAATCTTCTAGCTACGATAtgatatttttggattttgaaaccGG
CATTAACTTTTTATTATGTAAAGAATTTTCACAAATTGCTGGTATTGAGG
CAGGCTCTTTGcaggaaaaaaaaccgagtcAATTACAATTGGCACCTCTT
ACAATGGCCATTTTGATAACGGCTCTTACGGTATTGCGCCGCTGGTGAAA
ACCATATCATTGAATCACATATTTGTGATGATGAACTTTCAGGTTAACTA
ACCTAACCACTCACTGCACTCTGCCTACACCTGTATAATCAATCAAACTA
TCATTATCCTATTTATGTTTGGAATTAGataattttctcaattttttttt
aattattttcttgGATACGTATTGGAAATTTATGAGTGATTTTGTGTGAC
GTTTATGTTTTCCCCTTTtgaaattaaatcaaatttGCTCAAAGAATAAG
TCAAGAATTGTAAATCAACTTTACGACTCGATTGTCCGCTGCTTTAGATC
ACCTTCCAAGTTTATTAGAACACAAATAAAAGACTCAGCTCAATAATATT
TGTTATTCTGTTTCAGGCtagtttatgtttctttttggtatttaatttat
ttcagattttgattgtttgtttctttcctccaccaaaatattttttgtgt
ctTTGGATGTAAATATTccaatttttttagaacaaataataattattata
aagaaaacacATTTGTAAGCTTTCAAAATACTATTCTTGCCATCAGCTGA
ATTTTAGAAAGAATGGCGTTCTTTTTACCATTATTCTACACAATTCCGAG
GGCCAAAGTCCGATGACGGAAAAAGGCTCGAAAAAAGGTCTTATCCATga
ttactaaaaataaaaCTGAGTTTCAGTGGCACTGAGAACAAAG Run BLAST on NCBI transcript from alignment at sc0000039:81334..92675+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004006 ID=TCONS_00004006|Name=TCONS_00004006|organism=Clytia hemisphaerica|type=transcript|length=11342bp|location=Sequence derived from alignment at sc0000039:81334..92675+ (Clytia hemisphaerica)
CCTACTTATGCCGccttttagaaagattttttttgttgacGAAATCAGAA
ATTGCAAAGCGCGGATGTGTTGTGTTAtatttcaagatggcggctcaagg
cGAGGGAAATATCGGTGGGTATATTCCTCCAACTTTTCCCCAGAGAAACG
GTTATGAGCGAGAGACCCCGATCCTAGACTCAGGTCCAGATCATTCAATG
GAAGACATGATAAAAGAGGCAACTGATATGCAATCAGGATCGAGTTTCAA
CCGATCCAGGCTTCGAATGCAAACTGATGAAGGTGTATCACCGTTTCAAC
AACCTGCAGCGCAACCAAACTCTTCTTACTCCTCTTCTAGTAGTTACAAA
GGTAGATTTCTCCTCTGACTaacatttttaatttaaaaggttttttacTA
ACAAACATGTTCAGGTAAAAGATTTATAAGTCCTCTTGATTTTAGACTTT
TAGTCAGTTTAGTTTAATATATAATAAAccaaacaagacgacttaaagtc
gaaaatttcgcataatacttgaacatcaacgacgaagacgcatgaaacgt
gactcctgcagcattatgcattttgaatgaagcgctACACGAGGTcatag
ataccctgttttttatgaaaaatcttaatccattaaaaaaagattcctta
aaaaatgcgactaaagaattccattctataaagcgtaaacaaaatctttc
aattcagagaactgcaatatacacttgagaaaaataattttaaatgtttt
tgaaaatgaagaagaaaaaatgaacttttcattcttcggtgccagaaacc
tcattttgggctttgaaggaacttgtgataaagacttcattcacttgcgc
aaagtttatatcaacttctttctataaacagtagaatttatcTAAAACTG
AGAAAAATGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNg
ctagtcagaaaaatctgttgtatactactttctgatatgaatgatggccc
accaccatcaaaatcatttgacttttccagaaaaaaattgaatattgggg
ggggggaagggtataacattttttggaaatttaccctggacattgtgact
tttgatcccccggacagcaggtctaacccacCCCGCCCCAGACATCAGtt
gagtagttgagctccagcttctggactaaAAAATGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaatca
gcttaaattcgctttcattgtcctttgactttcaaaaaatagtatttaaa
aattatgaatttataataattacaaaaaacaaaaagtttgatacttctag
ggaaatattcaataaattcctagtttcaattttcagcgGGTGTTTTTCTA
GGGGTTCGTTTAttgcgcaatttttgcgtcacacaaactttctcggccgc
tcgtaataattatgcattgccaaatttagttctccattgtcaagtcaggc
agtgtagacctaactcttcatacaaaaattacgggaaacgcatatttgga
ctttgtaccctatgctgcactcaagcacttgtgccaaaatcccgcaaagg
cgggacaaaaatcagttttttgaagtttgcaaaaaaacgccacatagaag
atctttcaaattcagtatgtgaatagagcagtaaNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCCGCGCCGCGCGCCAcgcgggagctcgggcgctaT
GCGAGAGTTCtcagctcaatcctcggaccgcgctaaaaatggtaaactga
gctgtgatagatcatttcgatgcaagttgttggaatgtttacaaggctct
tgacagaaaattgtttgttttattgtcaatgatgacagtgtggttattaa
ttttgttagatctgacaaattgatgtttgtaagtgcactttatagttttg
attcccattgaagaatcatattctggttttcatgttattagatgctgttt
tagagctttaggtctacactgtcagGATTGATGGTGACGttacctaagca
taaaaaagaaaggatttcgtcactTTTATGCATGTATGAATTTGAGAGAT
ATTCACACTTTTCATAGACTAGTCGGAATGCTTTCTTTTACTCGctggat
tgatggtaacttttcatcttcattatttttaaaatgaagcacaaacgaaa
aaaacaaaacttcagaaagttgcgtatttccagtgagtaaacaattctga
caattaacaaaattgatgatgatgattttttttcggtcaggcaaatgtct
cgtattgggggttctagtcttgacccctaagcctatgCGAGATTGAAgag
tttgggtaaacgagacaaaactccaaaaaagctggtgttttgaagcgctt
ccgtgcaatcgaaatatcgctgtttgtgacgcactgatcCACGCAACAAG
AAAATCCCAGGAGTCCGGGGAATTAGCAGGGTCGTCTGTAAGCATGCAAT
TGCACTGCTGAAATTTACGCCTAGGTGCAATTGCAGGTTTACAAATCCAG
CCCAGGTTAAGATTGCTTGAGCAGATAGAAGAgttctcattttcaaaatc
gTGCAAATGCAGTGAGGCGggaatttcgatttttgaggattacgatttta
ccagttttttagcgatttttgccttgctaacccaaatcttgcaacatctt
taccttaaggaagatcgaaattagagtttttcagcgttctgaaaaaaacg
catagcagaaattttttcatcttcacaggatatattctcaacaacaaaat
acatcttttggtctttgggtttgtttctgacgttttttcttcaaagaata
tcgatcactttccttttccccttgagcgcgtgagaaaaaaatgattagct
cacGTTTtggcgcgggcgaataaagatgaggcggcaatcttgcactgagg
gtgctacttagtttccgccctattttgcgcccacgatagaatggtctaaa
cacgggggtattccaaatgataaactatgtcattctgtaagtgtttattt
tctgagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNtaaaaaaattctatgtttacaaacattccctctccaagttga
acaataaactattgcaagaactcttgaaacaaaacatccaACAATGGCTT
TAAAATGTCACGATGTTAAtcaatgtgataaaaaaagtgtgagttgtaaa
aattaTCAGCAATTttaaataattaccttttattctgaatccgttgtTTG
TGTTTAAAACCTTAACAAATGTTATTTGATTTAATGGATTCAAtatatca
aatctctcagtttagttgacgcTTTGGTATCTGTGTTGCACCAcacagca
aaaggtttgtttttattttagtttgtatctttgaaagaccccatcagaat
taggcagggctgttggaTTTAGGACCCCTCacaatagtatattgaatatt
attaacttatttatttaagtatttttgagcgcaaatttaaatatatggtt
aaataaaaaacaaatgataacagttctgtttatcctaaaacccccgggaa
aagttatTTTGcagacttagctattttacaaatcttggaattccgataca
taacccgattggttaatttcggaacagcttcaagaaagtcataatgacag
ataattttaaaggtttcagaggaaatgtgtgtaatttatcgatgttgatg
gcttgttgatttttaaagaaataagatAACAGGTGtaactttttctaatc
ctggattatcgaggttccagctacactgaaatACATGGCCAAAAGGgaaa
aattctataaaaaattCTGAGTAAGATAAACCCAAGGctttcaaaattca
acaaagtAGTCAGAagcaaataaagttttttcaaatgaaaGACTAGTTAG
GCATGCATTTAGATGCTTACTGCTCATTCAGATTTATAGTGAAAAGTGTG
TAATTGCATCCAAAAATTCTTACATTTTCTATAGCCATATAATTGCGCGT
TAAGATCTCATAAGCTAAGGGTACAATAGTTGTTTTAGAGAACGTGACAG
CCTAttaaataacaaattactccacatacattactttcccttagccaata
aaaacgtgataaattatcttgtctctaggtaactgttgtggagtaattag
ttattcaataggtCGTCGCATTCTCCAAATTAAGAAAGTTGAATtggggc
tattccaaaaaaatcttACAGGGGTATTGAGGAACTTTTTCCTATGACAA
ATATTGTAGGCCATTGCACTCAGTCAAGTCAGGCCTGTTCTTCTTAAAAT
AGAATACAACACAATATGCGTACAGATGTGCAACCATATGCTTCAGATTG
CATATTTTCGCCCGCgttcctttagagctttagcataCTGGGCCAGAAAA
TGCACAATCTGCTCTGAGGTTATCAGATACAAGGCCAAAAGCTTTATGTt
atgaattttatattttaatgaaaacaaaaataaagcttCTATGGTTTAAA
ACTACAAATGGTTGTTGGGacaggggggtcggtagtaaaatctcagacat
atatgagtagtaaaaggatttttacgaatttttacataccaccacccaga
ctctttgAAGAGTTATTTTACTATCCTGgtagcaaacaactttccaacag
aaaattttttcaagttatataaattttcagatttttcagaaaagtcatcc
aaaaaattaaaagaattataaaaatagctaaaatttgctaattttaccag
ttttaactacccaggttgtaaaattttttcaacatttaacacatagatac
cacccattttagtatttaactaccctgggtagtaaatttttttttcgatt
ttttggtCACACCatcaccgtagtaaacgtcattatgtctgagattttac
taccgacccccccccccccggttggGANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCCCCCCCCCCGCTGGTTGGGATCAAATTGTAAGA
CCAAACTTTAGTGATTTTAAGGAGGGGTAGTGTCTAATAGCCAAATgcta
aaagggcatgaaaaaggAGACTGATCCCTGATTTTGTCAAACAGATAAtg
tttttcttccaaaattggGCTACAAACATTTTGAGAAttactgtgcaaaa
aatctgaaaatctgtCGAGAAGAAAATAGAGGAGCCTGTTTTACGCCGgc
tttcggctgttccggcaatttttaaggagttgaaaaatgatttttctggT
AATCAAACCAACGATGCAAAACTTTGAGCATCACCATGAAATAGTTTTGT
TTGTGAAGAAAGAATCAAGTCAAGTAGATCAAGAGagatttcactttcgt
ttttatgTACTCGTCTTTGTATTCGTGTAAATAGTACTTTTCAAAGCACT
TAATTtctgtttgaaaatttaaaagattactcacttttttcgaaatttaa
gaTTTGTGATGATGTGATGATGTTACATGTAGATATAGCGCAATAAGTTT
CAAGAAAGGTGTACTCTGAGTAGAAAGGGAAGGGCTCCTGTCCATCCCAC
CCCGCATATAATGAACCCCCTGAAAgctgggggctggacccctctggGAC
CCATCTGCACACTATGCCCCGTTCAAAACCCCCTCTTTAGTCGGCATCAA
AACCCCCAGCCTTAAGATTTAGGAAACTGCATTGGTCTCCATTTTACAGG
GTGAGGCTCGAATTAGACGAGGGAAAAGTTGGGAAGGCAGCCTTGAACGA
AGTGAATATAATGCAAGAAAACTCCTTGACACATTGAGCTATGATTATTT
CTAAAAgggaaaatatctttcaaaagtGCTAAGGCTTCTATTCATATCTA
TTAGAACCCCAGATAACCTCGAATTATTCCCAAAACATGGGAAAAATGTT
AGTGGTATTATGGTCGTTTTGGAGGCTACATTTTTCATACAGTCATTATT
TTGAGgcgaatcaaaagttattgcacGTACCCTACAGTTTAGAGAAACAA
TATTGTTTAGTTAATTAAAAGCGGATTTGATATTATGATAGAGAGAAGTC
TAAGCGAAAATCTCATTACATTCTATTACATATAACATATAATAGCATAA
CCTAACATTCTTTACACTTTGCATTTCACTAAAACACTACTTACACAATT
TCGCATACACGAAATATACTTACCATAAAGGAGAAATTTACACTTGCTTT
TTATGAAGCTTCTAAATCAAGCACATATTTTACTCATCAAACACCTCATA
CATGCAACGCAGTTTGTTCAGTGTTTCTTGTGTATCGCCAGAGAATGCAT
TTTACAAGATGTCTTGAATTTTCTCAACTGGAAAAGATAGCGATATTTCC
ATAACCTGAGCAAAACTTTGAACATTgatatcttattttttttgagattt
tcttgacccccttttttctttagtttttcaaatatttttttcctttcatt
GTGGTAGATATATAGTTTCGTTGAATTATTCGACCATCTTGTCCTGGTGA
TTCATAACCACGTGTCCTCTCTCTTTCTCCTCTTCCATCAACACAAATTT
CGTTATCTCAATATTTGCGCTATAACAAGAGAGACTTCTGTTTGATCGAT
TTTTATCGCAAcgtaaagagaaaaaagaagcTCTTTGTTCATGTCTATAA
TATTTCTATAGATGTGTTaagctaattttcttcaaaataatatAGTGTTT
TTTACATTAAAAGATTCTACGCGTAATATTATAAGGTTCGTGTTGTGTGG
CAGAGAATTTCATGTAGAAGAGGGGAAAACATTAGAATTTTCACTGAACT
AACTTGTCTGTCTTGATTTCTTCAGCGACTCCGAACACACTTCAATCACC
TTTCGGAAACCCTCAACCACAATCGTCTTACAGCTCATCATCACACAATA
TGGCACCATCTGGCTATGGGAATCAGCAACAATCACAATCAGGAGGGTAC
AATGCTCCTCAACCTCAAGGAACTCAACTGGTAAAGGGTGCTGATGCTGG
CGTCAAATTAGAAGCTCTAAAGAAATGGACCATGTCAACGTACAAATACA
CCAAACAAATGGTGTCCGAAAAAATGGGCCGTCGAACACGGACCGTGGAT
ACCGAATTGGAAAAACACATCCAAGGCTTAAAAGAAATGCAACTGCGCTA
CACCAATTTGTTAAAACTTTCTAAACaatttcaaagtcaatttcaaaata
ttttggtcacaCAGAAGCTGATGGGTGAAGCATTCAACGAGCTAGCTGTC
AAGTCTCCTGATTTGCAGGaagaattttcacaaaatgcTGAATTACAGAA
AGTCGTTTCTAAAAATGGTGACGCCTTGATTTCAGCTCTTACATTTTTCA
ACGAGAATCTTTGGACTTTATCGACTAAAACGATCGAGGACACGATTCAA
ACGATTCGAGATTACGAGAATTGTCGTATCGAGTATGATGCCTACCGGAC
GGATTTGGAAGCACATGAGGCGGTCGGACAATCAATGAAAACGGAACAAG
CTAGAAAAGaattcaacgagcacaaagAGAAATTCGAATCTTTACGAAAC
AATCttcaaattaaaatgaaatttcttgaaGAGAATAAGGTAGGTTTTGG
ACGTTGATTCTCTCTTATATACACTAATCACCCCTCTCTTCTTTATCCAG
tcgttttatgtttttattttgcacTTTCTTAATACGTGTCTGGATGCTCT
TAGCTTATATTTCTATCCTAACAGTGCGATTTATAATTACTtgttttttg
atcattttttacTGATAAGTTTTTTCACAGAttcgaaaagatttttttac
gtttttcttgGCTTTGCTGTTATAAACTTTGATTCCTTGAAATAACTTTA
GGTGAAGGTAATGCGAAAACAATTATTGATTCTGCACAACGCCCTGGCTG
CCTACTTTTCTGGTAACAAGGACGAACTGGAAAAAACGATGAAAGAATTT
CACATTCGTGTCATGAACAAAGGCGAAGAAGCTTCCTTCCTTGAAACGCA
CTAAATTGAACTTGTTCCATTCAAAAAATCTTCTAGTTACGATATGATAT
TTTTGGATNCTGAACTTGTTGCATTCAAAAAATCTTCTAGCTACGATAtg
atatttttggattttgaaaccGGCATTAACTTTTTATTATGTAAAGAATT
TTCACAAATTGCTGGTATTGAGGCAGGCTCTTTGcaggaaaaaaaaccga
gtcAATTACAATTGGCACCTCTTACAATGGCCATTTTGATAACGGCTCTT
ACGGTATTGCGCCGCTGGTGAAAACCATATCATTGAATCACATATTTGTG
ATGATGAACTTTCAGGTTAACTAACCTAACCACTCACTGCACTCTGCCTA
CACCTGTATAATCAATCAAACTATCATTATCCTATTTATGTTTGGAATTA
GataattttctcaatttttttttaattattttcttgGATACGTATTGGAA
ATTTATGAGTGATTTTGTGTGACGTTTATGTTTTCCCCTTTtgaaattaa
atcaaatttGCTCAAAGAATAAGTCAAGAATTGTAAATCAACTTTACGAC
TCGATTGTCCGCTGCTTTAGATCACCTTCCAAGTTTATTAGAACACAAAT
AAAAGACTCAGCTCAATAATATTTGTTATTCTGTTTCAGGCtagtttatg
tttctttttggtatttaatttatttcagattttgattgtttgtttctttc
ctccaccaaaatattttttgtgtctTTGGATGTAAATATTccaatttttt
tagaacaaataataattattataaagaaaacacATTTGTAAGCTTTCAAA
ATACTATTCTTGCCATCAGCTGAATTTTAGAAAGAATGGCGTTCTTTTTA
CCATTATTCTACACAATTCCGAGGGCCAAAGTCCGATGACGGAAAAAGGC
TCGAAAAAAGGTCTTATCCATgattactaaaaataaaaatgagtttCAGT
GGCACCGAGNAggctcgaaaaaagatcttatccattattactaaaaataa
aaatgttcggtAACCTGAGTTTCAGTGGCACTGAGAACAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004006-exon-sc0000039-1491911889:81334..81447 | TCONS_00004006-exon-sc0000039-1491911889:81334..81447 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1510915933:81334..81447 | TCONS_00004006-exon-sc0000039-1510915933:81334..81447 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1575043694:81334..81447 | TCONS_00004006-exon-sc0000039-1575043694:81334..81447 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1491911889:90459..91222 | TCONS_00004006-exon-sc0000039-1491911889:90459..91222 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1510915933:90459..91222 | TCONS_00004006-exon-sc0000039-1510915933:90459..91222 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1575043694:90459..91222 | TCONS_00004006-exon-sc0000039-1575043694:90459..91222 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1491911889:91485..92571 | TCONS_00004006-exon-sc0000039-1491911889:91485..92571 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1510915933:91485..92571 | TCONS_00004006-exon-sc0000039-1510915933:91485..92571 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1575043694:91485..92571 | TCONS_00004006-exon-sc0000039-1575043694:91485..92571 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1491911889:92648..92675 | TCONS_00004006-exon-sc0000039-1491911889:92648..92675 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1510915933:92648..92675 | TCONS_00004006-exon-sc0000039-1510915933:92648..92675 | Clytia hemisphaerica | exon |
| TCONS_00004006-exon-sc0000039-1575043694:92648..92675 | TCONS_00004006-exon-sc0000039-1575043694:92648..92675 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:81334..92675 + |
Blast
BLAST of TCONS_00004006 vs. Swiss-Prot (Human)
Match: ARFP1 (Arfaptin-1 OS=Homo sapiens GN=ARFIP1 PE=1 SV=2) HSP 1 Score: 247.284 bits (630), Expect = 1.476e-74 Identity = 120/248 (48.39%), Postives = 183/248 (73.79%), Query Frame = 3
Query: 294 KLEALKKWTMSTYKYTKQMVSEKMGRRTRTVDTELEKHIQGLKEMQLRYTNLLKLSKQFQSQFQNILVTQKLMGEAFNELAVKSPDLQEEFSQNAELQKVVSKNGDALISALTFFNENLWTLSTKTIEDTIQTIRDYENCRIEYDAYRTDLE----AHEAVGQSMKTEQARKEFNEHKEKFESLRNNLQIKMKFLEENKVKVMRKQLLILHNALAAYFSGNKDELEKTMKEFHIRVMNKGEEA-SFLE 1022
KLE ++KW+++TYK T+Q++SEK+GR +RTVD ELE I L++ + +Y N+LKL++ +Q ++ TQ+ +G+AF +L++KS +L EEF NA+ QK+++KNG+ L+ A+ FF ++ TL KTIEDT+ T++ YE+ RIEYDAYRTDLE K EQ++ F HKEK++ +RN++ +K+KFLEENKVKV+ QL++ HNA+AAYF+GN+ +LE+T+K+FHI++ G +A S+LE
Sbjct: 124 KLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLE 371
The following BLAST results are available for this feature:
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