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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004005 ID=TCONS_00004005|Name=TCONS_00004005|organism=Clytia hemisphaerica|type=transcript|length=2010bp
AATTCACCTCCCGTGATGTGTTCTTCTATCAATCTTTTATTTACGATATT
GTAAAAGACGtcgtttttgaaatcgaagTTCGAGATATGGAGGTGTGATG
CCCATCATATCAGCATTGCTTAGGTGTCCAACGACTCCGAACACACTTCA
ATCACCTTTCGGAAACCCTCAACCACAATCGTCTTACAGCTCATCATCAC
ACAATATGGCACCATCTGGCTATGGGAATCAGCAACAATCACAATCAGGA
GGGTACAATGCTCCTCAACCTCAAGGAACTCAACTGGTAAAGGGTGCTGA
TGCTGGCGTCAAATTAGAAGCTCTAAAGAAATGGACCATGTCAACGTACA
AATACACCAAACAAATGGTGTCCGAAAAAATGGGCCGTCGAACACGGACC
GTGGATACCGAATTGGAAAAACACATCCAAGGCTTAAAAGAAATGCAACT
GCGCTACACCAATTTGTTAAAACTTTCTAAACaatttcaaagtcaatttc
aaaatattttggtcacaCAGAAGCTGATGGGTGAAGCATTCAACGAGCTA
GCTGTCAAGTCTCCTGATTTGCAGGaagaattttcacaaaatgcTGAATT
ACAGAAAGTCGTTTCTAAAAATGGTGACGCCTTGATTTCAGCTCTTACAT
TTTTCAACGAGAATCTTTGGACTTTATCGACTAAAACGATCGAGGACACG
ATTCAAACGATTCGAGATTACGAGAATTGTCGTATCGAGTATGATGCCTA
CCGGACGGATTTGGAAGCACATGAGGCGGTCGGACAATCAATGAAAACGG
AACAAGCTAGAAAAGaattcaacgagcacaaagAGAAATTCGAATCTTTA
CGAAACAATCttcaaattaaaatgaaatttcttgaaGAGAATAAGGTGAA
GGTAATGCGAAAACAATTATTGATTCTGCACAACGCCCTGGCTGCCTACT
TTTCTGGTAACAAGGACGAACTGGAAAAAACGATGAAAGAATTTCACATT
CGTGTCATGAACAAAGGCGAAGAAGCTTCCTTCCTTGAAACGCACTAAAT
TGAACTTGTTCCATTCAAAAAATCTTCTAGTTACGATATGATATTTTTGG
ATNCTGAACTTGTTGCATTCAAAAAATCTTCTAGCTACGATAtgatattt
ttggattttgaaaccGGCATTAACTTTTTATTATGTAAAGAATTTTCACA
AATTGCTGGTATTGAGGCAGGCTCTTTGcaggaaaaaaaaccgagtcAAT
TACAATTGGCACCTCTTACAATGGCCATTTTGATAACGGCTCTTACGGTA
TTGCGCCGCTGGTGAAAACCATATCATTGAATCACATATTTGTGATGATG
AACTTTCAGGTTAACTAACCTAACCACTCACTGCACTCTGCCTACACCTG
TATAATCAATCAAACTATCATTATCCTATTTATGTTTGGAATTAGataat
tttctcaatttttttttaattattttcttgGATACGTATTGGAAATTTAT
GAGTGATTTTGTGTGACGTTTATGTTTTCCCCTTTtgaaattaaatcaaa
tttGCTCAAAGAATAAGTCAAGAATTGTAAATCAACTTTACGACTCGATT
GTCCGCTGCTTTAGATCACCTTCCAAGTTTATTAGAACACAAATAAAAGA
CTCAGCTCAATAATATTTGTTATTCTGTTTCAGGCtagtttatgtttctt
tttggtatttaatttatttcagattttgattgtttgtttctttcctccac
caaaatattttttgtgtctTTGGATGTAAATATTccaatttttttagaac
aaataataattattataaagaaaacacATTTGTAAGCTTTCAAAATACTA
TTCTTGCCATCAGCTGAATTTTAGAAAGAATGGCGTTCTTTTTACCATTA
TTCTACACAATTCCGAGGGCCAAAGTCCGATGACGGAAAAAGGCTCGAAA
AAAGGTCTTATCCATgattactaaaaataaaaCTGAGTTTCAGTGGCACT
GAGAACAAAG Run BLAST on NCBI transcript from alignment at sc0000039:80842..92675+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004005 ID=TCONS_00004005|Name=TCONS_00004005|organism=Clytia hemisphaerica|type=transcript|length=11834bp|location=Sequence derived from alignment at sc0000039:80842..92675+ (Clytia hemisphaerica)
AATTCACCTCCCGTGATGTGTTCTTCTATCAATCTTTTATTTACGATATT
GTAAAAGACGtcgtttttgaaatcgaagTTCGAGATATGGAGGTGTGATG
CCCATCATATCAGCATTGCTTAGGTGTCCAAGTAAGTTAGATTTGTTTTT
TACAAACGTTTTTTTAGAGTGGTTTGGCTACAATGTTACACCGCGACTTT
TAATACGCATAAACTGTCGtcaaaatcatattttctaCCGTTGTTGAGAA
TCAGCATCGATGGAATCAGATAATTTTCATCCAGAAAACCCAAAGTTTGA
AATCATTAAGTCTAATCCTCTCTATTGGTAATAGACATGTTTAGACAGCC
TAGAAATACTACTAGAGTCAGCAATTGACAAATCAAAGTCAGTATAATGA
TGCTATATCAACATCCTAACTCCTAACTGCCCCCTCCCCTAATTAAACCT
GTTCTCGCAGATAGTATAGTCCGTCCGCCCGAAGGGCGTAATCCTACTTA
TGCCGccttttagaaagattttttttgttgacGAAATCAGAAATTGCAAA
GCGCGGATGTGTTGTGTTAtatttcaagatggcggctcaaggcGAGGGAA
ATATCGGTGGGTATATTCCTCCAACTTTTCCCCAGAGAAACGGTTATGAG
CGAGAGACCCCGATCCTAGACTCAGGTCCAGATCATTCAATGGAAGACAT
GATAAAAGAGGCAACTGATATGCAATCAGGATCGAGTTTCAACCGATCCA
GGCTTCGAATGCAAACTGATGAAGGTGTATCACCGTTTCAACAACCTGCA
GCGCAACCAAACTCTTCTTACTCCTCTTCTAGTAGTTACAAAGGTAGATT
TCTCCTCTGACTaacatttttaatttaaaaggttttttacTAACAAACAT
GTTCAGGTAAAAGATTTATAAGTCCTCTTGATTTTAGACTTTTAGTCAGT
TTAGTTTAATATATAATAAAccaaacaagacgacttaaagtcgaaaattt
cgcataatacttgaacatcaacgacgaagacgcatgaaacgtgactcctg
cagcattatgcattttgaatgaagcgctACACGAGGTcatagataccctg
ttttttatgaaaaatcttaatccattaaaaaaagattccttaaaaaatgc
gactaaagaattccattctataaagcgtaaacaaaatctttcaattcaga
gaactgcaatatacacttgagaaaaataattttaaatgtttttgaaaatg
aagaagaaaaaatgaacttttcattcttcggtgccagaaacctcattttg
ggctttgaaggaacttgtgataaagacttcattcacttgcgcaaagttta
tatcaacttctttctataaacagtagaatttatcTAAAACTGAGAAAAAT
GGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgctagtcag
aaaaatctgttgtatactactttctgatatgaatgatggcccaccaccat
caaaatcatttgacttttccagaaaaaaattgaatattggggggggggaa
gggtataacattttttggaaatttaccctggacattgtgacttttgatcc
cccggacagcaggtctaacccacCCCGCCCCAGACATCAGttgagtagtt
gagctccagcttctggactaaAAAATGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaatcagcttaaat
tcgctttcattgtcctttgactttcaaaaaatagtatttaaaaattatga
atttataataattacaaaaaacaaaaagtttgatacttctagggaaatat
tcaataaattcctagtttcaattttcagcgGGTGTTTTTCTAGGGGTTCG
TTTAttgcgcaatttttgcgtcacacaaactttctcggccgctcgtaata
attatgcattgccaaatttagttctccattgtcaagtcaggcagtgtaga
cctaactcttcatacaaaaattacgggaaacgcatatttggactttgtac
cctatgctgcactcaagcacttgtgccaaaatcccgcaaaggcgggacaa
aaatcagttttttgaagtttgcaaaaaaacgccacatagaagatctttca
aattcagtatgtgaatagagcagtaaNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCCCGCGCCGCGCGCCAcgcgggagctcgggcgctaTGCGAGAGT
TCtcagctcaatcctcggaccgcgctaaaaatggtaaactgagctgtgat
agatcatttcgatgcaagttgttggaatgtttacaaggctcttgacagaa
aattgtttgttttattgtcaatgatgacagtgtggttattaattttgtta
gatctgacaaattgatgtttgtaagtgcactttatagttttgattcccat
tgaagaatcatattctggttttcatgttattagatgctgttttagagctt
taggtctacactgtcagGATTGATGGTGACGttacctaagcataaaaaag
aaaggatttcgtcactTTTATGCATGTATGAATTTGAGAGATATTCACAC
TTTTCATAGACTAGTCGGAATGCTTTCTTTTACTCGctggattgatggta
acttttcatcttcattatttttaaaatgaagcacaaacgaaaaaaacaaa
acttcagaaagttgcgtatttccagtgagtaaacaattctgacaattaac
aaaattgatgatgatgattttttttcggtcaggcaaatgtctcgtattgg
gggttctagtcttgacccctaagcctatgCGAGATTGAAgagtttgggta
aacgagacaaaactccaaaaaagctggtgttttgaagcgcttccgtgcaa
tcgaaatatcgctgtttgtgacgcactgatcCACGCAACAAGAAAATCCC
AGGAGTCCGGGGAATTAGCAGGGTCGTCTGTAAGCATGCAATTGCACTGC
TGAAATTTACGCCTAGGTGCAATTGCAGGTTTACAAATCCAGCCCAGGTT
AAGATTGCTTGAGCAGATAGAAGAgttctcattttcaaaatcgTGCAAAT
GCAGTGAGGCGggaatttcgatttttgaggattacgattttaccagtttt
ttagcgatttttgccttgctaacccaaatcttgcaacatctttaccttaa
ggaagatcgaaattagagtttttcagcgttctgaaaaaaacgcatagcag
aaattttttcatcttcacaggatatattctcaacaacaaaatacatcttt
tggtctttgggtttgtttctgacgttttttcttcaaagaatatcgatcac
tttccttttccccttgagcgcgtgagaaaaaaatgattagctcacGTTTt
ggcgcgggcgaataaagatgaggcggcaatcttgcactgagggtgctact
tagtttccgccctattttgcgcccacgatagaatggtctaaacacggggg
tattccaaatgataaactatgtcattctgtaagtgtttattttctgagNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
taaaaaaattctatgtttacaaacattccctctccaagttgaacaataaa
ctattgcaagaactcttgaaacaaaacatccaACAATGGCTTTAAAATGT
CACGATGTTAAtcaatgtgataaaaaaagtgtgagttgtaaaaattaTCA
GCAATTttaaataattaccttttattctgaatccgttgtTTGTGTTTAAA
ACCTTAACAAATGTTATTTGATTTAATGGATTCAAtatatcaaatctctc
agtttagttgacgcTTTGGTATCTGTGTTGCACCAcacagcaaaaggttt
gtttttattttagtttgtatctttgaaagaccccatcagaattaggcagg
gctgttggaTTTAGGACCCCTCacaatagtatattgaatattattaactt
atttatttaagtatttttgagcgcaaatttaaatatatggttaaataaaa
aacaaatgataacagttctgtttatcctaaaacccccgggaaaagttatT
TTGcagacttagctattttacaaatcttggaattccgatacataacccga
ttggttaatttcggaacagcttcaagaaagtcataatgacagataatttt
aaaggtttcagaggaaatgtgtgtaatttatcgatgttgatggcttgttg
atttttaaagaaataagatAACAGGTGtaactttttctaatcctggatta
tcgaggttccagctacactgaaatACATGGCCAAAAGGgaaaaattctat
aaaaaattCTGAGTAAGATAAACCCAAGGctttcaaaattcaacaaagtA
GTCAGAagcaaataaagttttttcaaatgaaaGACTAGTTAGGCATGCAT
TTAGATGCTTACTGCTCATTCAGATTTATAGTGAAAAGTGTGTAATTGCA
TCCAAAAATTCTTACATTTTCTATAGCCATATAATTGCGCGTTAAGATCT
CATAAGCTAAGGGTACAATAGTTGTTTTAGAGAACGTGACAGCCTAttaa
ataacaaattactccacatacattactttcccttagccaataaaaacgtg
ataaattatcttgtctctaggtaactgttgtggagtaattagttattcaa
taggtCGTCGCATTCTCCAAATTAAGAAAGTTGAATtggggctattccaa
aaaaatcttACAGGGGTATTGAGGAACTTTTTCCTATGACAAATATTGTA
GGCCATTGCACTCAGTCAAGTCAGGCCTGTTCTTCTTAAAATAGAATACA
ACACAATATGCGTACAGATGTGCAACCATATGCTTCAGATTGCATATTTT
CGCCCGCgttcctttagagctttagcataCTGGGCCAGAAAATGCACAAT
CTGCTCTGAGGTTATCAGATACAAGGCCAAAAGCTTTATGTtatgaattt
tatattttaatgaaaacaaaaataaagcttCTATGGTTTAAAACTACAAA
TGGTTGTTGGGacaggggggtcggtagtaaaatctcagacatatatgagt
agtaaaaggatttttacgaatttttacataccaccacccagactctttgA
AGAGTTATTTTACTATCCTGgtagcaaacaactttccaacagaaaatttt
ttcaagttatataaattttcagatttttcagaaaagtcatccaaaaaatt
aaaagaattataaaaatagctaaaatttgctaattttaccagttttaact
acccaggttgtaaaattttttcaacatttaacacatagataccacccatt
ttagtatttaactaccctgggtagtaaatttttttttcgattttttggtC
ACACCatcaccgtagtaaacgtcattatgtctgagattttactaccgacc
cccccccccccggttggGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCCCCCCCCCCCGCTGGTTGGGATCAAATTGTAAGACCAAACTT
TAGTGATTTTAAGGAGGGGTAGTGTCTAATAGCCAAATgctaaaagggca
tgaaaaaggAGACTGATCCCTGATTTTGTCAAACAGATAAtgtttttctt
ccaaaattggGCTACAAACATTTTGAGAAttactgtgcaaaaaatctgaa
aatctgtCGAGAAGAAAATAGAGGAGCCTGTTTTACGCCGgctttcggct
gttccggcaatttttaaggagttgaaaaatgatttttctggTAATCAAAC
CAACGATGCAAAACTTTGAGCATCACCATGAAATAGTTTTGTTTGTGAAG
AAAGAATCAAGTCAAGTAGATCAAGAGagatttcactttcgtttttatgT
ACTCGTCTTTGTATTCGTGTAAATAGTACTTTTCAAAGCACTTAATTtct
gtttgaaaatttaaaagattactcacttttttcgaaatttaagaTTTGTG
ATGATGTGATGATGTTACATGTAGATATAGCGCAATAAGTTTCAAGAAAG
GTGTACTCTGAGTAGAAAGGGAAGGGCTCCTGTCCATCCCACCCCGCATA
TAATGAACCCCCTGAAAgctgggggctggacccctctggGACCCATCTGC
ACACTATGCCCCGTTCAAAACCCCCTCTTTAGTCGGCATCAAAACCCCCA
GCCTTAAGATTTAGGAAACTGCATTGGTCTCCATTTTACAGGGTGAGGCT
CGAATTAGACGAGGGAAAAGTTGGGAAGGCAGCCTTGAACGAAGTGAATA
TAATGCAAGAAAACTCCTTGACACATTGAGCTATGATTATTTCTAAAAgg
gaaaatatctttcaaaagtGCTAAGGCTTCTATTCATATCTATTAGAACC
CCAGATAACCTCGAATTATTCCCAAAACATGGGAAAAATGTTAGTGGTAT
TATGGTCGTTTTGGAGGCTACATTTTTCATACAGTCATTATTTTGAGgcg
aatcaaaagttattgcacGTACCCTACAGTTTAGAGAAACAATATTGTTT
AGTTAATTAAAAGCGGATTTGATATTATGATAGAGAGAAGTCTAAGCGAA
AATCTCATTACATTCTATTACATATAACATATAATAGCATAACCTAACAT
TCTTTACACTTTGCATTTCACTAAAACACTACTTACACAATTTCGCATAC
ACGAAATATACTTACCATAAAGGAGAAATTTACACTTGCTTTTTATGAAG
CTTCTAAATCAAGCACATATTTTACTCATCAAACACCTCATACATGCAAC
GCAGTTTGTTCAGTGTTTCTTGTGTATCGCCAGAGAATGCATTTTACAAG
ATGTCTTGAATTTTCTCAACTGGAAAAGATAGCGATATTTCCATAACCTG
AGCAAAACTTTGAACATTgatatcttattttttttgagattttcttgacc
cccttttttctttagtttttcaaatatttttttcctttcattGTGGTAGA
TATATAGTTTCGTTGAATTATTCGACCATCTTGTCCTGGTGATTCATAAC
CACGTGTCCTCTCTCTTTCTCCTCTTCCATCAACACAAATTTCGTTATCT
CAATATTTGCGCTATAACAAGAGAGACTTCTGTTTGATCGATTTTTATCG
CAAcgtaaagagaaaaaagaagcTCTTTGTTCATGTCTATAATATTTCTA
TAGATGTGTTaagctaattttcttcaaaataatatAGTGTTTTTTACATT
AAAAGATTCTACGCGTAATATTATAAGGTTCGTGTTGTGTGGCAGAGAAT
TTCATGTAGAAGAGGGGAAAACATTAGAATTTTCACTGAACTAACTTGTC
TGTCTTGATTTCTTCAGCGACTCCGAACACACTTCAATCACCTTTCGGAA
ACCCTCAACCACAATCGTCTTACAGCTCATCATCACACAATATGGCACCA
TCTGGCTATGGGAATCAGCAACAATCACAATCAGGAGGGTACAATGCTCC
TCAACCTCAAGGAACTCAACTGGTAAAGGGTGCTGATGCTGGCGTCAAAT
TAGAAGCTCTAAAGAAATGGACCATGTCAACGTACAAATACACCAAACAA
ATGGTGTCCGAAAAAATGGGCCGTCGAACACGGACCGTGGATACCGAATT
GGAAAAACACATCCAAGGCTTAAAAGAAATGCAACTGCGCTACACCAATT
TGTTAAAACTTTCTAAACaatttcaaagtcaatttcaaaatattttggtc
acaCAGAAGCTGATGGGTGAAGCATTCAACGAGCTAGCTGTCAAGTCTCC
TGATTTGCAGGaagaattttcacaaaatgcTGAATTACAGAAAGTCGTTT
CTAAAAATGGTGACGCCTTGATTTCAGCTCTTACATTTTTCAACGAGAAT
CTTTGGACTTTATCGACTAAAACGATCGAGGACACGATTCAAACGATTCG
AGATTACGAGAATTGTCGTATCGAGTATGATGCCTACCGGACGGATTTGG
AAGCACATGAGGCGGTCGGACAATCAATGAAAACGGAACAAGCTAGAAAA
GaattcaacgagcacaaagAGAAATTCGAATCTTTACGAAACAATCttca
aattaaaatgaaatttcttgaaGAGAATAAGGTAGGTTTTGGACGTTGAT
TCTCTCTTATATACACTAATCACCCCTCTCTTCTTTATCCAGtcgtttta
tgtttttattttgcacTTTCTTAATACGTGTCTGGATGCTCTTAGCTTAT
ATTTCTATCCTAACAGTGCGATTTATAATTACTtgttttttgatcatttt
ttacTGATAAGTTTTTTCACAGAttcgaaaagatttttttacgtttttct
tgGCTTTGCTGTTATAAACTTTGATTCCTTGAAATAACTTTAGGTGAAGG
TAATGCGAAAACAATTATTGATTCTGCACAACGCCCTGGCTGCCTACTTT
TCTGGTAACAAGGACGAACTGGAAAAAACGATGAAAGAATTTCACATTCG
TGTCATGAACAAAGGCGAAGAAGCTTCCTTCCTTGAAACGCACTAAATTG
AACTTGTTCCATTCAAAAAATCTTCTAGTTACGATATGATATTTTTGGAT
NCTGAACTTGTTGCATTCAAAAAATCTTCTAGCTACGATAtgatattttt
ggattttgaaaccGGCATTAACTTTTTATTATGTAAAGAATTTTCACAAA
TTGCTGGTATTGAGGCAGGCTCTTTGcaggaaaaaaaaccgagtcAATTA
CAATTGGCACCTCTTACAATGGCCATTTTGATAACGGCTCTTACGGTATT
GCGCCGCTGGTGAAAACCATATCATTGAATCACATATTTGTGATGATGAA
CTTTCAGGTTAACTAACCTAACCACTCACTGCACTCTGCCTACACCTGTA
TAATCAATCAAACTATCATTATCCTATTTATGTTTGGAATTAGataattt
tctcaatttttttttaattattttcttgGATACGTATTGGAAATTTATGA
GTGATTTTGTGTGACGTTTATGTTTTCCCCTTTtgaaattaaatcaaatt
tGCTCAAAGAATAAGTCAAGAATTGTAAATCAACTTTACGACTCGATTGT
CCGCTGCTTTAGATCACCTTCCAAGTTTATTAGAACACAAATAAAAGACT
CAGCTCAATAATATTTGTTATTCTGTTTCAGGCtagtttatgtttctttt
tggtatttaatttatttcagattttgattgtttgtttctttcctccacca
aaatattttttgtgtctTTGGATGTAAATATTccaatttttttagaacaa
ataataattattataaagaaaacacATTTGTAAGCTTTCAAAATACTATT
CTTGCCATCAGCTGAATTTTAGAAAGAATGGCGTTCTTTTTACCATTATT
CTACACAATTCCGAGGGCCAAAGTCCGATGACGGAAAAAGGCTCGAAAAA
AGGTCTTATCCATgattactaaaaataaaaatgagtttCAGTGGCACCGA
GNAggctcgaaaaaagatcttatccattattactaaaaataaaaatgttc
ggtAACCTGAGTTTCAGTGGCACTGAGAACAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004005-exon-sc0000039-1491911889:80842..80972 | TCONS_00004005-exon-sc0000039-1491911889:80842..80972 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1510915933:80842..80972 | TCONS_00004005-exon-sc0000039-1510915933:80842..80972 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1575043694:80842..80972 | TCONS_00004005-exon-sc0000039-1575043694:80842..80972 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1491911889:90459..91222 | TCONS_00004005-exon-sc0000039-1491911889:90459..91222 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1510915933:90459..91222 | TCONS_00004005-exon-sc0000039-1510915933:90459..91222 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1575043694:90459..91222 | TCONS_00004005-exon-sc0000039-1575043694:90459..91222 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1491911889:91485..92571 | TCONS_00004005-exon-sc0000039-1491911889:91485..92571 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1510915933:91485..92571 | TCONS_00004005-exon-sc0000039-1510915933:91485..92571 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1575043694:91485..92571 | TCONS_00004005-exon-sc0000039-1575043694:91485..92571 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1491911889:92648..92675 | TCONS_00004005-exon-sc0000039-1491911889:92648..92675 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1510915933:92648..92675 | TCONS_00004005-exon-sc0000039-1510915933:92648..92675 | Clytia hemisphaerica | exon |
| TCONS_00004005-exon-sc0000039-1575043694:92648..92675 | TCONS_00004005-exon-sc0000039-1575043694:92648..92675 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000039 | supercontig | sc0000039:80842..92675 + |
Blast
BLAST of TCONS_00004005 vs. Swiss-Prot (Human)
Match: ARFP1 (Arfaptin-1 OS=Homo sapiens GN=ARFIP1 PE=1 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 1.347e-74 Identity = 120/248 (48.39%), Postives = 183/248 (73.79%), Query Frame = 2
Query: 311 KLEALKKWTMSTYKYTKQMVSEKMGRRTRTVDTELEKHIQGLKEMQLRYTNLLKLSKQFQSQFQNILVTQKLMGEAFNELAVKSPDLQEEFSQNAELQKVVSKNGDALISALTFFNENLWTLSTKTIEDTIQTIRDYENCRIEYDAYRTDLE----AHEAVGQSMKTEQARKEFNEHKEKFESLRNNLQIKMKFLEENKVKVMRKQLLILHNALAAYFSGNKDELEKTMKEFHIRVMNKGEEA-SFLE 1039
KLE ++KW+++TYK T+Q++SEK+GR +RTVD ELE I L++ + +Y N+LKL++ +Q ++ TQ+ +G+AF +L++KS +L EEF NA+ QK+++KNG+ L+ A+ FF ++ TL KTIEDT+ T++ YE+ RIEYDAYRTDLE K EQ++ F HKEK++ +RN++ +K+KFLEENKVKV+ QL++ HNA+AAYF+GN+ +LE+T+K+FHI++ G +A S+LE
Sbjct: 124 KLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLE 371
The following BLAST results are available for this feature:
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