TCONS_00003991 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003991
Unique NameTCONS_00003991
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length82

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003991 ID=TCONS_00003991|Name=TCONS_00003991|organism=Clytia hemisphaerica|type=transcript|length=82bp
AAGATAATTACACAGAGACGTTCGAAACGTTTATCGCTTGTTCAACAGAG
TATGACGAGATACCTTTACTTGCAAAACCGCT
Run BLAST on NCBI

transcript from alignment at sc0000038:457828..457909

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003991 ID=TCONS_00003991|Name=TCONS_00003991|organism=Clytia hemisphaerica|type=transcript|length=82bp|location=Sequence derived from alignment at sc0000038:457828..457909 (Clytia hemisphaerica)
AGCGGTTTTGCAAGTAAAGGTATCTCGTCATACTCTGTTGAACAAGCGAT
AAACGTTTCGAACGTCTCTGTGTAATTATCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002240XLOC_002240Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003991-exon-sc0000038-1491911889:457828..457909TCONS_00003991-exon-sc0000038-1491911889:457828..457909Clytia hemisphaericaexon
TCONS_00003991-exon-sc0000038-1510915933:457828..457909TCONS_00003991-exon-sc0000038-1510915933:457828..457909Clytia hemisphaericaexon
TCONS_00003991-exon-sc0000038-1575043694:457828..457909TCONS_00003991-exon-sc0000038-1575043694:457828..457909Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:457828..457909 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003991 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top