|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003970 ID=TCONS_00003970|Name=TCONS_00003970|organism=Clytia hemisphaerica|type=transcript|length=999bp
TAGAGCTAAACATGAAAGTGGTTCAAATCAGCGATCTGTTCTTTAATCAT
AACCCTAAagttagactatgctatagtctaagacgagtttcatctaagag
gaacaaacgtgaagacgggaattttttttttcgggggTAGCTGTTGTCAC
AGACTCAATCCGCCGCGCAACATATtatgttttataatatacaaactatg
ttatatcataataatatattatacggacgatagcatcgtctacccTAAAG
TTTTCATGCAAATACGAAAATGATTCAGAATTAGCTTGGTAGCTTGAATA
TCGTAAATAactgaagattgccatcctggatggcaaaaactttgagtatg
aaattaactgAAAACTTAATTCTTTACACAAACTtaataaatatttattt
tcatttttcagaacTCTTCACCCGAGGTTGACCGTTAATCACGAAAGATC
ATCATTGGAAATATCAACTTTTGTTgtcttcagtttcaaaatagtAACTT
TCCTTTACGATCTACGTATTATATATAACCAACGattattgaatatttat
tttttttatcgaCTAAGATGTAGTACCCTAGCTAAACCAGTGTTAAAAGT
TCCACCGTCTCATCGCAGTATGCAATGAGACTTTACTGTCTTAGAACTTA
TTGAAAATCTTGACTAATTTGTCATGTTGAGTTTATTGTTCATCTGAGAT
GAAAAACTTGCCTTGACAACTGATGAACGGTACTTCACGTGATAGATTTT
CCTTGTTTGAGAAGTGACTCGCCAAATTAGGGCCAAACCAGTAACAAAAT
CTTTCACTTTTGAGTCAATGAATTACAAACATCAATCGACTTTTTAACTG
GAGATAAACTAGCTTAACTAGCGACTTACTTTGTTTAACATAGCCAAGCA
TACGATAGGCTGCGCGCTTCCCcgaaattgattttaatatagGGAATGCG
TATCgcgtataaaattcccgtctgAGAGTTACTCCAAATTCGGGGTAAC Run BLAST on NCBI transcript from alignment at sc0000038:37957..38955 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003970 ID=TCONS_00003970|Name=TCONS_00003970|organism=Clytia hemisphaerica|type=transcript|length=999bp|location=Sequence derived from alignment at sc0000038:37957..38955 (Clytia hemisphaerica)
GTTACCCCGAATTTGGAGTAACTCTcagacgggaattttatacgcGATAC
GCATTCCctatattaaaatcaatttcgGGGAAGCGCGCAGCCTATCGTAT
GCTTGGCTATGTTAAACAAAGTAAGTCGCTAGTTAAGCTAGTTTATCTCC
AGTTAAAAAGTCGATTGATGTTTGTAATTCATTGACTCAAAAGTGAAAGA
TTTTGTTACTGGTTTGGCCCTAATTTGGCGAGTCACTTCTCAAACAAGGA
AAATCTATCACGTGAAGTACCGTTCATCAGTTGTCAAGGCAAGTTTTTCA
TCTCAGATGAACAATAAACTCAACATGACAAATTAGTCAAGATTTTCAAT
AAGTTCTAAGACAGTAAAGTCTCATTGCATACTGCGATGAGACGGTGGAA
CTTTTAACACTGGTTTAGCTAGGGTACTACATCTTAGtcgataaaaaaaa
taaatattcaataatCGTTGGTTATATATAATACGTAGATCGTAAAGGAA
AGTTactattttgaaactgaagacAACAAAAGTTGATATTTCCAATGATG
ATCTTTCGTGATTAACGGTCAACCTCGGGTGAAGAgttctgaaaaatgaa
aataaatatttattaAGTTTGTGTAAAGAATTAAGTTTTcagttaatttc
atactcaaagtttttgccatccaggatggcaatcttcagtTATTTACGAT
ATTCAAGCTACCAAGCTAATTCTGAATCATTTTCGTATTTGCATGAAAAC
TTTAgggtagacgatgctatcgtccgtataatatattattatgatataac
atagtttgtatattataaaacataATATGTTGCGCGGCGGATTGAGTCTG
TGACAACAGCTAcccccgaaaaaaaaaattcccgtcttcacgtttgttcc
tcttagatgaaactcgtcttagactatagcatagtctaactTTAGGGTTA
TGATTAAAGAACAGATCGCTGATTTGAACCACTTTCATGTTTAGCTCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003970-exon-sc0000038-1491911889:37957..38955 | TCONS_00003970-exon-sc0000038-1491911889:37957..38955 | Clytia hemisphaerica | exon |
| TCONS_00003970-exon-sc0000038-1510915933:37957..38955 | TCONS_00003970-exon-sc0000038-1510915933:37957..38955 | Clytia hemisphaerica | exon |
| TCONS_00003970-exon-sc0000038-1575043694:37957..38955 | TCONS_00003970-exon-sc0000038-1575043694:37957..38955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:37957..38955 . |
Blast
The following BLAST results are available for this feature:
|
