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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003969 ID=TCONS_00003969|Name=TCONS_00003969|organism=Clytia hemisphaerica|type=transcript|length=994bp
TCgttcttttttcaatatttttgtttctatcAGAGCTTtcctatgtaaaa
aaatgaggtACATGAATTTTCTGACATTAGATCCCCTTTAAAGATCTCTC
ATATAAAACCTAGTAATCAAGTTTCTAGAACTCGAAAGCATAAAGACGGG
GGTAAGTCTCGGacaggaattttatacacgatataGATCCCGTATATATC
AAAacatcagaggggatgcgtgcagtcTACGCCAGACGTTACTAATCGAT
AATTAATCGATTTACTGATCGATAATTAATCGATTGATTAAATATCGACT
AAAAACGATAAGCGATAAATAATCGGCGcctaaaaaattgtgagtatcga
TTATAACGATCAGATATAAGATATCGATTATATCAATTAGATATCGATCC
AAGTTTTATTgatattatcgattaaaaatcgatagGGTTGAGGTATCGAT
TATATCCATATTAATCGATATTATCAATTATTAACACTGTAATCGATATT
ATCGATCTAAAATCTATGGTGATAATTTAATTGAGTgctaaaaaattgtg
agtatcgattagctatcgattatcGTTTTTAGTCGATATTTAATCAATCG
ATTAATTATCTattagctatcgattttattCGATAATCGATTTTATCGAT
TAGTAACGTCTGGTCTAGGCATATGATTgcatagtctgaatcgcagacct
ctataagaaacttttttcgctagaggatgagcagaagcctaatgATTGCA
TGGGATATAGACTTcaccttttttgttttgatgatgtaaataaagtaaaa
agatgtaaataaaatataattcaaattttcataataTGGTATGTATAATT
TTCCtggaaattattttatttttcgatgattacctaatgtttattttttg
ctaaataaaaataatatagaGAAAAACGTGTAAATAGCGTGTGTGCATGG
ATATTATAATTTCATTCTAAAAGATATTAATATCTATATTTTCC Run BLAST on NCBI transcript from alignment at sc0000038:36340..37333 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003969 ID=TCONS_00003969|Name=TCONS_00003969|organism=Clytia hemisphaerica|type=transcript|length=994bp|location=Sequence derived from alignment at sc0000038:36340..37333 (Clytia hemisphaerica)
GGAAAATATAGATATTAATATCTTTTAGAATGAAATTATAATATCCATGC
ACACACGCTATTTACACGTTTTTCtctatattatttttatttagcaaaaa
ataaacattaggtaatcatcgaaaaataaaataatttccaGGAAAATTAT
ACATACCAtattatgaaaatttgaattatattttatttacatctttttac
tttatttacatcatcaaaacaaaaaaggtgAAGTCTATATCCCATGCAAT
cattaggcttctgctcatcctctagcgaaaaaagtttcttatagaggtct
gcgattcagactatgcAATCATATGCCTAGACCAGACGTTACTAATCGAT
AAAATCGATTATCGaataaaatcgatagctaatAGATAATTAATCGATTG
ATTAAATATCGACTAAAAACgataatcgatagctaatcgatactcacaat
tttttagcACTCAATTAAATTATCACCATAGATTTTAGATCGATAATATC
GATTACAGTGTTAATAATTGATAATATCGATTAATATGGATATAATCGAT
ACCTCAACCctatcgatttttaatcgataatatcAATAAAACTTGGATCG
ATATCTAATTGATATAATCGATATCTTATATCTGATCGTTATAAtcgata
ctcacaattttttaggCGCCGATTATTTATCGCTTATCGTTTTTAGTCGA
TATTTAATCAATCGATTAATTATCGATCAGTAAATCGATTAATTATCGAT
TAGTAACGTCTGGCGTAgactgcacgcatcccctctgatgtTTTGATATA
TACGGGATCtatatcgtgtataaaattcctgtCCGAGACTTACCCCCGTC
TTTATGCTTTCGAGTTCTAGAAACTTGATTACTAGGTTTTATATGAGAGA
TCTTTAAAGGGGATCTAATGTCAGAAAATTCATGTacctcatttttttac
ataggaAAGCTCTgatagaaacaaaaatattgaaaaaagaacGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003969-exon-sc0000038-1491911889:36340..37333 | TCONS_00003969-exon-sc0000038-1491911889:36340..37333 | Clytia hemisphaerica | exon |
| TCONS_00003969-exon-sc0000038-1510915933:36340..37333 | TCONS_00003969-exon-sc0000038-1510915933:36340..37333 | Clytia hemisphaerica | exon |
| TCONS_00003969-exon-sc0000038-1575043694:36340..37333 | TCONS_00003969-exon-sc0000038-1575043694:36340..37333 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:36340..37333 . |
Blast
The following BLAST results are available for this feature:
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